Tan0000918 (gene) Snake gourd v1

Overview
NameTan0000918
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein of unknown function (DUF3511)
LocationLG01: 18058867 .. 18059199 (+)
RNA-Seq ExpressionTan0000918
SyntenyTan0000918
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGTTCCATCGTCGTCCAGAAAAGGGTGGCGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGCGAAAACAAAATGTACTTAAATCAGTCGTCCCAAAAGCGAGTCATCGTCGATCCATCATTTATGAAACGACATGCGAAAAAGACGACAGAATCGTCGAAAAGTTCGAAGAAATCATGGTGGAAGAACCCGGAAATGAAGAGACGACAACGTGTGGCAAAATACAAATTGTATGCTGTTGAAGGGAAGGTAAAGAACTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTAGCAGAATCATTTCTGGGTTTTGA

mRNA sequence

ATGGAGGGGTTCCATCGTCGTCCAGAAAAGGGTGGCGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGCGAAAACAAAATGTACTTAAATCAGTCGTCCCAAAAGCGAGTCATCGTCGATCCATCATTTATGAAACGACATGCGAAAAAGACGACAGAATCGTCGAAAAGTTCGAAGAAATCATGGTGGAAGAACCCGGAAATGAAGAGACGACAACGTGTGGCAAAATACAAATTGTATGCTGTTGAAGGGAAGGTAAAGAACTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTAGCAGAATCATTTCTGGGTTTTGA

Coding sequence (CDS)

ATGGAGGGGTTCCATCGTCGTCCAGAAAAGGGTGGCGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGCGAAAACAAAATGTACTTAAATCAGTCGTCCCAAAAGCGAGTCATCGTCGATCCATCATTTATGAAACGACATGCGAAAAAGACGACAGAATCGTCGAAAAGTTCGAAGAAATCATGGTGGAAGAACCCGGAAATGAAGAGACGACAACGTGTGGCAAAATACAAATTGTATGCTGTTGAAGGGAAGGTAAAGAACTCCATAAAGAAAGGGATCAAGTGGTTCAAAACCAAGTGTAGCAGAATCATTTCTGGGTTTTGA

Protein sequence

MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKSSKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF
Homology
BLAST of Tan0000918 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 86/110 (78.18%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKSS 60
           MEG H    K GGRSLEV+DVRKLSENKMYLNQ SQ+R +VDPSF+KR+  KT E SK  
Sbjct: 1   MEGLHHHQNK-GGRSLEVMDVRKLSENKMYLNQ-SQRRTVVDPSFVKRYVTKTWEPSK-M 60

Query: 61  KKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           KKSWWK PEMKRRQRVAKYKLYAVEGKVK+SIKKG +W KTKCSRIISGF
Sbjct: 61  KKSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Tan0000918 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 8.5e-35
Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKS- 60
           MEG H  P K GGRSLEVIDVRKLS NK+YLNQ SQ+R +VDPSF+K++  KT+E SKS 
Sbjct: 1   MEGLHHHPNK-GGRSLEVIDVRKLSVNKVYLNQ-SQRRTVVDPSFVKQYVTKTSEPSKSC 60

Query: 61  SKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
            KK WWK PEM+RRQRVAKYKLY VEGKVK SIKKGI+W KTKCSRIISGF
Sbjct: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Tan0000918 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 3.2e-34
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPS-FMKRHA-KKTTESSK 60
           MEG HRRP+K GGRSLE+IDVR LSENK+ L+Q S+ R  VDPS   KR A KK +ESSK
Sbjct: 1   MEGIHRRPKK-GGRSLEIIDVRNLSENKLSLSQ-SRSRAAVDPSPSTKRQAIKKPSESSK 60

Query: 61  SSKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           SS KSWWKNPEMKRR+RVAKYKLY VEGKVKNSIKKGIKWFKT+CSRI+SGF
Sbjct: 61  SSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of Tan0000918 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.7 bits (361), Expect = 9.7e-31
Identity = 74/111 (66.67%), Postives = 92/111 (82.88%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSK-S 60
           MEG HRRP KGGGRSLEVIDVRKLSEN+++L+Q S++   +DPS +K    KT E S+  
Sbjct: 1   MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQ-SRRPAAMDPSAVKPRVVKTGEGSRGG 60

Query: 61  SKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           S  SWWKNPEMKR++RVAKYKLY VEG+VK+SIKKG++WFK++CSRI+ GF
Sbjct: 61  SGNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF 110

BLAST of Tan0000918 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 8.2e-30
Identity = 73/109 (66.97%), Postives = 84/109 (77.06%), Query Frame = 0

Query: 2   EGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKSSK 61
           EG H  P      SLE +D  KLS+N MYLNQ  QKRVI+  SF+KRH  KT+ESSK S 
Sbjct: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQ-PQKRVIISSSFVKRHIIKTSESSKRST 64

Query: 62  KSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           +SWWKNP++KRR+RVAKY+ Y VEGKVK+SIKKGIKW KTKCSRII GF
Sbjct: 65  RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

BLAST of Tan0000918 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.2e-36
Identity = 86/110 (78.18%), Postives = 93/110 (84.55%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKSS 60
           MEG H    K GGRSLEV+DVRKLSENKMYLNQ SQ+R +VDPSF+KR+  KT E SK  
Sbjct: 1   MEGLHHHQNK-GGRSLEVMDVRKLSENKMYLNQ-SQRRTVVDPSFVKRYVTKTWEPSK-M 60

Query: 61  KKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           KKSWWK PEMKRRQRVAKYKLYAVEGKVK+SIKKG +W KTKCSRIISGF
Sbjct: 61  KKSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of Tan0000918 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.1e-35
Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKS- 60
           MEG H  P K GGRSLEVIDVRKLS NK+YLNQ SQ+R +VDPSF+K++  KT+E SKS 
Sbjct: 1   MEGLHHHPNK-GGRSLEVIDVRKLSVNKVYLNQ-SQRRTVVDPSFVKQYVTKTSEPSKSC 60

Query: 61  SKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
            KK WWK PEM+RRQRVAKYKLY VEGKVK SIKKGI+W KTKCSRIISGF
Sbjct: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of Tan0000918 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPS-FMKRHA-KKTTESSK 60
           MEG HRRP+K GGRSLE+IDVR LSENK+ L+Q S+ R  VDPS   KR A KK +ESSK
Sbjct: 1   MEGIHRRPKK-GGRSLEIIDVRNLSENKLSLSQ-SRSRAAVDPSPSTKRQAIKKPSESSK 60

Query: 61  SSKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           SS KSWWKNPEMKRR+RVAKYKLY VEGKVKNSIKKGIKWFKT+CSRI+SGF
Sbjct: 61  SSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of Tan0000918 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-28
Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTT-ESSKS 60
           ME  HRRP K G R+L++IDVRKLSENKM+LNQ S++   +DPS MK  A KTT ESSK+
Sbjct: 3   MERVHRRPNK-GDRNLKIIDVRKLSENKMHLNQ-SRRHSTIDPSSMKPRAIKTTSESSKA 62

Query: 61  SK-KSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           S  K WWKN EMKRR+RVAKYKLY VEG+VK SI+KGI WFK +C+RIISGF
Sbjct: 63  STVKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of Tan0000918 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24
Identity = 69/111 (62.16%), Postives = 84/111 (75.68%), Query Frame = 0

Query: 1   MEGFHRRPEKGGGRSLEVIDVRKLSENKMYLNQSSQKRVIVDPSFMKRHAKKTTESSKSS 60
           MEG HRRP K G R+L +IDVRKLSENK++LNQS ++  +   S   R  K  +ESSK+S
Sbjct: 39  MEGVHRRPNK-GDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTS 98

Query: 61  -KKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
             KSW K  E+KRR+RVAKYKLY VEGKVK+SI+KGI WFK K +RI+SGF
Sbjct: 99  GGKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of Tan0000918 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-11
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 0

Query: 12  GGRSLEVIDVR--KLSENKMYLNQSSQKRVIVDPSFMKRHAKK-------TTESSKSSKK 71
           G R+L++++    KL      + +S + R  +     ++ + K        + S  +  K
Sbjct: 17  GDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFK 76

Query: 72  SWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISG 110
            WW +PE+KR++RVAKYKLY+ EGK+K +++K  KW K +CS+II G
Sbjct: 77  GWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of Tan0000918 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.3 bits (129), Expect = 7.2e-08
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 54  TESSKSSKKSWWKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           + +S S +     + EMKR++R+A+YK Y VEGKVK+++K G +W K KC +I+  F
Sbjct: 54  SNASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of Tan0000918 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.2 bits (121), Expect = 6.1e-07
Identity = 22/51 (43.14%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 59  SSKKSW-WKNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIIS 109
           SS  SW + +P+++R++RV  Y+ Y VEGK+K S +K  KW K KC+++++
Sbjct: 66  SSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of Tan0000918 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 27/71 (38.03%), Postives = 43/71 (60.56%), Query Frame = 0

Query: 42  DPSFMKRHAKKTTESSKSSKKSWWK---NPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKW 101
           +P+ ++  +   ++ S   KK  +K     E++R++RVA Y +Y VEG+VK S+KK  KW
Sbjct: 55  NPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKW 114

Query: 102 FKTKCSRIISG 110
           FK  CS  + G
Sbjct: 115 FKETCSNAVYG 125

BLAST of Tan0000918 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0

Query: 55  ESSKSSKKSWW-KNPEMKRRQRVAKYKLYAVEGKVKNSIKKGIKWFKTKCSRIISGF 111
           E S +  KSW   +PE++R++RVA YK+Y VEGKVK S +   +W K + ++++ G+
Sbjct: 48  EKSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0033960.11.7e-3578.18DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro... [more]
KGN56136.18.5e-3575.68hypothetical protein Csa_009524 [Cucumis sativus][more]
XP_022151002.13.2e-3477.68uncharacterized protein LOC111019023 [Momordica charantia][more]
KAG7017168.19.7e-3166.67hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600771.18.2e-3066.97hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3BTT88.2e-3678.18DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A0A0L7N54.1e-3575.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1[more]
A0A6J1DCB31.6e-3477.68uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3BBI71.3e-2868.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL302.5e-2462.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.19.1e-1134.58Protein of unknown function (DUF3511) [more]
AT2G47480.17.2e-0843.86Protein of unknown function (DUF3511) [more]
AT2G19460.16.1e-0743.14Protein of unknown function (DUF3511) [more]
AT1G72720.11.0e-0638.03Protein of unknown function (DUF3511) [more]
AT5G11970.11.0e-0642.11Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 65..109
e-value: 4.6E-23
score: 80.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..69
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 1..110
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000918.1Tan0000918.1mRNA