Tan0000915 (gene) Snake gourd v1

Overview


Name	Tan0000915
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING/U-box superfamily protein
Location	LG06: 3677332 .. 3681128 (-)
RNA-Seq Expression	Tan0000915
Synteny	Tan0000915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCGCGTCATCGTCTTCTTCGTCAAATCCACTGGAAGAAAAAAATGAAGGCTCTGAATCGACTCTGAAGTTGTGTGATATTTGTGAAGAGAAAAAGGAAAAAGAAAAAATGTTTAGAATCGAGCCGTGTTTTCACTCCTTTTGCTGCGATTGTGTAATTAAACACGTCTCTGCAAAGATCTCCGATGGCTATTCCTTCATTTCGTGCCCTAGTTTAAACTGCTCCAGTTCCATAGAGTTCGACACCTGCTGGTAATTTTTTGTTACTCCCATTATTATTATTATTTTGGAATTGGATTCATGATATAATGTTTTAACTAATTAAGCTAAGTTCGAGTAGGCATTTATGAAGTTAATGGGCTTTTGTTGTTTATGATATAATAATTTAGGTTCAATTGACAACTATTTAAGCCAGTTTGATAATTATTTGTTTTTTGATTTTTAGTTTTTGAAAATTAAACTTCAAAATATTTTTTTTCTATCTATGTTGAGGAACACATGGAAATCAATTGCAGAAAAGTTGAAGAAAAATTATGAAAAAATAAGTATAATTTTTAAATTAAAAATCAAATGGTTATTAGATGTAGTCTTAATTTTTAGTTATTGTTTTTTATTTTGTTTGAATACATAGTTTTCGAAAATTAAACCTATAAATATCTATCTATATGGTTTTCTACCTTCTCTTGTTTTAAAAAATCAAATCAAAATTTGAAAATTAAAAAAAGGTTGTTTTTGTTTTTCAGAATTTGATTAAGAATTCAAGTTTTTTCTTAAAGAAATGAAATCATGGTACAAAAATGGTGAGAAAATAAGTTCAATTTTACTTAGATTTCAGAAGAATGGGATGAAAAACTTGAAATTATTTGAGAACATGACTATAATGTGATTTTATAGTACTAGTATTGGATGTATTAGGTAGAAATTATTGAAGAATATCTCTCGGTTATTTGGGGTATATATATATATAGGTTTTTGAATCTATATTTAGGATTATACTTTTTGAAGAATCGGAGATGGAATCGACTTTTGTTCTTATCTACTGACCCCGGTAGATTGGCAGTTTTATGCTTTTTATTTTTTCTTTCTTTTTGGAATTTATTAATATAGCATTTAGTTTAAAAAAAATAAAAAATGAAATATGATGAAGTTAAATTAGTTACGTTATATTAGAAATTTGTAGCTAGACTTCGATTTTCAATTTATTCCTAGACTTCAAATTTTTCAATTTGGTTTTGAAACTTCATTTAATTATCTTATACGAGGGGTTTTATTGAGGGTTTTTATTTCTCATATTATAGAGTTTATAGGACTTTTTTTTTGTTGAAAATGGTAGATCTGATTAGCTAAACTCACTTTTAAATTGACTTTGAATTCCTACCCTTTTAGAGGGATTTCAAATAATCCTTTTTATATTTAAGAATAACTAATCAGAGGAATTTATGCGAAATCCATTGTGATTAAAAATTTCTTGAAATTCGGTGGAAACAAACGGATTGTTACAAAAATTTGAAAATAAAATACTAATTTAACCTTAGTATATTTTAATGAATAAGATTTATAAAAGCCCATATTAGAATATTTCTTTATTGACTTCCAAATTTTTTTTCCTTAAAATCATAGTTGATTGTGGACAATACCTTCTCTTGGGTTTAAAGATAGAAACTCCACCTCCATATGTAAAATCCTATATTCTATTTTAAGTCACGTTGATATTCAACGAAAATACTTCAAAATTTGATATTCACTTATCTCTCTTACATGTTTACCTTTGAAAAGTTATATATTCTTAAAAAAGGAAATCAAATGACTCACTAGTGTGTGTTAGAAGTATATAAATAATTGATAGTATTTGATTAAATTATTTTTAAAGATACGAAAATAAATTTCTATTTCAAAAAAAAAAACCTTTTTAAAAATCTTTGAAAATTAAGAGAGTAGTTTCAGAAATTAAATTTTAGAAATAGATTAAAAAAAAAAGTCCTTGAATTTTTGCCTCTTGCTAATCAACCTAAAATTATGTACCGTTAAAATTTAAAAATAATTAGATCCAGCCTAATTTGCAGTCTAATGGGGGTAAATTAGTTAAAGCAATTTAGTTAAAGCAGACTCTCAATTATTTATTTATTTATATAATATGCATAGACAAAATTAAAATAAGATAGGAAAAATGCCTTTTAGCTTTAATTTTTGGTCTGCAGGGAAATGCTACCGAAGAAAGTAGCAGAGAAGTGGGACAAAGCACTGTGCGAAGCGCTTTTTACAGAAGCGGAGAAGGTATTTTGCCCATTCAAGAACTGCTCTGCGGCGATGATTGTGGAAAAAGAGGGAGCAGTAATAAGGGAGTGCGAGTGTCCGATTTGCCACAGACTGTTCTGCGCCACGTGCGGAGTGCCATGGCATGCGGAAGCCACGTGCGAGGAATATAAGAAGCTGAATGAAGACGAGAGGGACAGTGATGACATTTTGATGAAAAACCTTGCCTCTCAAATGAAATGGATGAGATGCCCTCGCTGCAAGTTCTTCGTTGAGAAAGTTTATGGTTGCTTGCACATCATTTGCAGGTTTTTTTCTTTCTTTATTTCATTTTTTGCATTCTTCACTTAACAAATATATAAATAGCTTAAATTTCTAAATTTTGGACAGTAAAGAATAGGTTAAAACAGGATTAAGGACTTTCATGGAACTAATAGTTTGGTCCATTCACTTCAGTTTTGTACTTTTAAATCTATAATAATAATAATTTAGTTTTTAAACTTTATAGCGAGACAACAATTTAGTCTCTGTAATTTAAATTTTTGGAACAATTTACTATCTATTGCGAAAACTTTGGTTAGGATTTAATAATTTTTTTACATAATAAATTAATTTAAGACCAAATGTCTTTATAAACTACAAAAATTAAATCGTTACATAATAAAAATGAACCATTAATTTTGTTGAAAATTTTTTTAGAGTAAGAATTAAATTGTTATAAATTTGAAAGTGTAAAAACTAAATTGTTTTCCATTAAAAGTTCTGAGATTAAATTGTTACATAATTTAAGAACTAAATCATTAGAAACTAAAATTTAGAAACTAAGGCCTCGTTTGATTTTTGAAAATTATGATTATTTCTTTCATCATCACTTCACTACCGTAGATTTTATCTTTCTAAAGAAAACATTTGAAATTATTTTTTTTTTAGTTTTGATTTGTTTTTTTTAAAACATAGGTAAAAATTAGATATCAAAATTAAGGAAACCCATGAGTAGAAATAGTTTTTATAAACAAAAATCAAAGTCCCATTTGATAATCATTTGATGTTTAGTTTTTTATTCTTAAACAAACATGCTTGTCTTTCCACAATTTTCTTTGCAATGATATTCATCTTTTTTTTAGTACGATTTAAGTTTTTAGTCAAATTTCAAAAAGAAAAACAAGTTTTTGAAAATTACTTTTAGTTTTCAAAATTTTGCTTGGTTTTTAAAAATATAGGTAAAAAGTAGATAAAAAATTAAACATAGAAATTCATTGATAGAAATAATATTTTTATGCTTAATTTTAAAAAACAAAAAACCAAACCCAAATATAATGGTTAGAGACAAAGTATTTTGAAAAAACAAATAAAATGTGCCCTTTTTTTTTAGATCAAGGCATTGTTAGAAACTTAGAATCATCAATAATGTTTCAACTTTACTTATGGTTTAATTTTGTGTATGGGTGATGAAATTTTTGTAGGTGTCGATTCGAGTTCTGCTATGCCTGTGGATCAAGTTGGTCTTCCACCCATTGCGGGTGTCAAGCCAACGACTGA

mRNA sequence

ATGTCGTCCGCGTCATCGTCTTCTTCGTCAAATCCACTGGAAGAAAAAAATGAAGGCTCTGAATCGACTCTGAAGTTGTGTGATATTTGTGAAGAGAAAAAGGAAAAAGAAAAAATGTTTAGAATCGAGCCGTGTTTTCACTCCTTTTGCTGCGATTGTGTAATTAAACACGTCTCTGCAAAGATCTCCGATGGCTATTCCTTCATTTCGTGCCCTAGTTTAAACTGCTCCAGTTCCATAGAGTTCGACACCTGCTGGGAAATGCTACCGAAGAAAGTAGCAGAGAAGTGGGACAAAGCACTGTGCGAAGCGCTTTTTACAGAAGCGGAGAAGGTATTTTGCCCATTCAAGAACTGCTCTGCGGCGATGATTGTGGAAAAAGAGGGAGCAGTAATAAGGGAGTGCGAGTGTCCGATTTGCCACAGACTGTTCTGCGCCACGTGCGGAGTGCCATGGCATGCGGAAGCCACGTGCGAGGAATATAAGAAGCTGAATGAAGACGAGAGGGACAGTGATGACATTTTGATGAAAAACCTTGCCTCTCAAATGAAATGGATGAGATGCCCTCGCTGCAAGTTCTTCGTTGAGAAAGTTTATGGTTGCTTGCACATCATTTGCAGGTGTCGATTCGAGTTCTGCTATGCCTGTGGATCAAGTTGGTCTTCCACCCATTGCGGGTGTCAAGCCAACGACTGA

Coding sequence (CDS)

ATGTCGTCCGCGTCATCGTCTTCTTCGTCAAATCCACTGGAAGAAAAAAATGAAGGCTCTGAATCGACTCTGAAGTTGTGTGATATTTGTGAAGAGAAAAAGGAAAAAGAAAAAATGTTTAGAATCGAGCCGTGTTTTCACTCCTTTTGCTGCGATTGTGTAATTAAACACGTCTCTGCAAAGATCTCCGATGGCTATTCCTTCATTTCGTGCCCTAGTTTAAACTGCTCCAGTTCCATAGAGTTCGACACCTGCTGGGAAATGCTACCGAAGAAAGTAGCAGAGAAGTGGGACAAAGCACTGTGCGAAGCGCTTTTTACAGAAGCGGAGAAGGTATTTTGCCCATTCAAGAACTGCTCTGCGGCGATGATTGTGGAAAAAGAGGGAGCAGTAATAAGGGAGTGCGAGTGTCCGATTTGCCACAGACTGTTCTGCGCCACGTGCGGAGTGCCATGGCATGCGGAAGCCACGTGCGAGGAATATAAGAAGCTGAATGAAGACGAGAGGGACAGTGATGACATTTTGATGAAAAACCTTGCCTCTCAAATGAAATGGATGAGATGCCCTCGCTGCAAGTTCTTCGTTGAGAAAGTTTATGGTTGCTTGCACATCATTTGCAGGTGTCGATTCGAGTTCTGCTATGCCTGTGGATCAAGTTGGTCTTCCACCCATTGCGGGTGTCAAGCCAACGACTGA

Protein sequence

MSSASSSSSSNPLEEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQAND

Homology

[Close]

BLAST of Tan0000915 vs. ExPASy Swiss-Prot
Match: Q9LVW9 (Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI4 PE=5 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 66/212 (31.13%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 20  SESTLKLCDIC-EEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGY-SFISCPSLNCS 79
           ++ T+K CDIC EE   K  M R+E C H FC DC  +H + +I++G    I C +  C+
Sbjct: 113 TKKTMK-CDICMEEDLSKYAMTRME-CGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCN 172

Query: 80  SSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKV-FCP-FKNCSAAMIVEKEGAVIREC 139
           +    D   +++  ++AEK+D+ L E+   +   V +CP   +C  A+   K+   + E 
Sbjct: 173 TIC--DEARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEV 232

Query: 140 ECPICHRLFCATCGVPWHAEATC---EEYKKLNEDERDSDDILMKNLASQMKWMRCPRCK 199
           EC  C   FC +C    H+  +C   + +KK  EDE ++ + +  N         CP+C 
Sbjct: 233 ECS-CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNT------KLCPKCS 292

Query: 200 FFVEKVYGCLHIICRCRFEFCYACGSSWSSTH 225
             ++K  GC H+ C+C   FC+ CG +    H
Sbjct: 293 KPIQKRDGCNHMTCKCGQHFCWLCGQATGRDH 313

[Close]

BLAST of Tan0000915 vs. ExPASy Swiss-Prot
Match: Q9SKC4 (Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=ARI10 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 57/209 (27.27%), Postives = 95/209 (45.45%), Query Frame = 0


Query: 27  CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSF--ISCPSLNCSSSIEFDT 86
           C IC E   ++++  +  C H +C  C   +++ KI DG     + CP  +C + +  D 
Sbjct: 121 CGICFESYTRKEIASVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 180

Query: 87  CWEMLPKKVAEKWDKALCEALFTEAEKV-FCPFKNCSAAMIVEKEGAVIRECECPICHRL 146
             E+  KK  +K+ +    +   + +K+ +CP   C  A+   +       C   +C   
Sbjct: 181 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVAC---LCSYR 240

Query: 147 FCATCGVPWHAEATCEEYKK---LNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYG 206
           FC  C    H+   CE   K    N+DE ++ + ++ N         CP+CK  +EK +G
Sbjct: 241 FCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSKP------CPKCKRPIEKSHG 300

Query: 207 CLHIIC--RCRFEFCYACGSSWSSTHCGC 228
           C H+ C   C   FC+ CG S+S  H  C
Sbjct: 301 CNHMTCSASCGHRFCWICGKSYSD-HYAC 318

[Close]

BLAST of Tan0000915 vs. ExPASy Swiss-Prot
Match: F4KGU4 (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15
Identity = 53/193 (27.46%), Postives = 84/193 (43.52%), Query Frame = 0


Query: 27   CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSF-ISCPSLNCSSSIEFDTC 86
            C IC    E +  + +E C H FC  C+++   A + +  +F I C  ++C + I     
Sbjct: 1564 CPIC--LSEVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADM 1623

Query: 87   WEMLPKKVAEKWDKALCEALFTEAEKV--FCPFKNCSAAMIVEKEGAVIRECECPICHRL 146
              +L ++  ++   A   +  T ++    FC   +C +   V           C  CH  
Sbjct: 1624 RALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSE 1683

Query: 147  FCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLH 206
             C  C + +H   TCE YKK  E    + D+ +K+ A       CP CK  +EK  GC H
Sbjct: 1684 ICTRCHLEYHPLITCERYKKFKE----NPDLSLKDWAKGKNVKECPICKSTIEKTDGCNH 1743

Query: 207  IICRCRFEFCYAC 217
            + CRC    C+ C
Sbjct: 1744 MKCRCGKHICWTC 1750

[Close]

BLAST of Tan0000915 vs. ExPASy Swiss-Prot
Match: P0CE10 (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-15
Identity = 54/193 (27.98%), Postives = 84/193 (43.52%), Query Frame = 0


Query: 27   CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSF-ISCPSLNCSSSIEFDTC 86
            C IC    E +  + +E C H FC  C+++   A + +  +F I C  ++C + I     
Sbjct: 1561 CPIC--LSEVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1620

Query: 87   WEMLPKKVAEKWDKALCEALFTEAEKV--FCPFKNCSAAMIVEKEGAVIRECECPICHRL 146
              +L ++  ++   A   A  T ++    FC   +C +   V           C  CH  
Sbjct: 1621 RALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSE 1680

Query: 147  FCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLH 206
             C  C + +H   TCE YKK  E    + D+ +K+ A       CP CK  +EK  GC H
Sbjct: 1681 TCTRCHLEYHPLITCERYKKFKE----NPDLSLKDWAKGKDVKECPICKSTIEKTDGCNH 1740

Query: 207  IICRCRFEFCYAC 217
            + CRC    C+ C
Sbjct: 1741 LQCRCGKHICWTC 1747

[Close]

BLAST of Tan0000915 vs. ExPASy Swiss-Prot
Match: Q9SKC2 (Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana OX=3702 GN=ARI11 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.6e-15
Identity = 60/208 (28.85%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 27  CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSF--ISCPSLNCSSSIEFDT 86
           C IC E   ++++ R+  C H +C  C   +++ KI DG     + CP  +C + +  D 
Sbjct: 139 CGICFESYTRKEIARVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 198

Query: 87  CWEMLPKKVAEKWDKALCEALFTEAEKV-FCPFKNCSAAMIVEKEGAVIRECECPICHRL 146
             E+  KK  +K+ +    +   + +K+ +CP   C  A+     G+   +  C +C   
Sbjct: 199 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEFGVNGSSSYDVSC-LCSYK 258

Query: 147 FCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLH 206
           FC  C    H+   CE   K     +D  + +   LA   K   CP+CK  +EK  GC H
Sbjct: 259 FCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILA---KTKPCPKCKRPIEKNTGCNH 318

Query: 207 IICR--CRFEFCYACGSSWSSTHCGCQA 230
           + C   CR  FC+AC    S  H  C A
Sbjct: 319 MSCSAPCRHYFCWACLQPLSD-HKACNA 340

[Close]

BLAST of Tan0000915 vs. NCBI nr
Match: KAA0058684.1 (putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa])

HSP 1 Score: 315.1 bits (806), Expect = 5.1e-82
Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 25  KLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDT 84
           KLC+IC E KE+  MF I+ C HSFC DCVIKHVS KI DGYS +SC +LNCSS I+F +
Sbjct: 3   KLCEICLEYKEEGNMFEIKTCLHSFCRDCVIKHVSTKIGDGYSSVSCLTLNCSSIIDFHS 62

Query: 85  CWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLF 144
           CW MLP + AEKW+KALCE ++ E EKV CPFK+CS  MIVE++ A IR+CECP+CHRLF
Sbjct: 63  CWTMLPNETAEKWNKALCEVVYREEEKVVCPFKDCSVGMIVERD-AKIRDCECPLCHRLF 122

Query: 145 CATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHI 204
           C TC VPWH   TCE+YK+L + E   D+ILMK LASQMKWM+CP+C+FFVEKV GCLHI
Sbjct: 123 CGTCRVPWHEGVTCEDYKRLYKYEDGRDEILMKKLASQMKWMKCPKCQFFVEKVSGCLHI 182

Query: 205 ICRCRFEFCYACGSSWSSTHCGC 228
            CRCRFEFCYACGS+WSSTH GC
Sbjct: 183 TCRCRFEFCYACGSAWSSTHGGC 204

[Close]

BLAST of Tan0000915 vs. NCBI nr
Match: TYK10490.1 (putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa])

HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81
Identity = 139/203 (68.47%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 25  KLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDT 84
           KLC+IC E KE+  MF I+ C HSFC DCVIKHVS KI DGYS +SC +LNCSS I+F +
Sbjct: 3   KLCEICLEYKEEGNMFEIKTCLHSFCRDCVIKHVSTKIGDGYSSVSCLTLNCSSIIDFHS 62

Query: 85  CWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLF 144
           CW MLP + AEKW+KALCE ++ E EKV CPFK+CS  MIVE++ A IR+CECP+CHRLF
Sbjct: 63  CWTMLPNETAEKWNKALCEVVYREEEKVVCPFKDCSVGMIVERD-AKIRDCECPLCHRLF 122

Query: 145 CATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHI 204
           C TC VPWH   TCE+YK+L + E   D+ILMK LASQMKWM+CP+C+ FVEKV GCLHI
Sbjct: 123 CGTCRVPWHEGVTCEDYKRLYKYEEGRDEILMKKLASQMKWMKCPKCQLFVEKVSGCLHI 182

Query: 205 ICRCRFEFCYACGSSWSSTHCGC 228
            CRCRFEFCYACGS+WSSTH GC
Sbjct: 183 TCRCRFEFCYACGSAWSSTHGGC 204

[Close]

BLAST of Tan0000915 vs. NCBI nr
Match: XP_022146079.1 (probable E3 ubiquitin-protein ligase RNF217 [Momordica charantia])

HSP 1 Score: 312.4 bits (799), Expect = 3.3e-81
Identity = 144/223 (64.57%), Postives = 171/223 (76.68%), Query Frame = 0


Query: 11  NPLEEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFIS 70
           NP  +    S S+ +LC+IC E+K  + MF IE C HSFC  CVIKHV+AKI+ G S +S
Sbjct: 21  NPSRKSKNSSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVS 80

Query: 71  CPSLNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEG- 130
           CPSL+CS  +EF+TCW MLPK+VAEKWD+ALCEALF EAEKV CPFK+CSAAM+  ++G 
Sbjct: 81  CPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAEKVMCPFKDCSAAMVNLEKGR 140

Query: 131 -AVIRECECPICHRLFCATCGVPWHAEATCEEY---KKLNEDERDSDDILMKNLASQMKW 190
            A I E ECPICHRLFCA C VPWHA  TCEEY   KK  +  R+ DD L+K++A +M+W
Sbjct: 141 SADILESECPICHRLFCAKCRVPWHARVTCEEYQRQKKSKKRGREDDDALLKDMARKMEW 200

Query: 191 MRCPRCKFFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQ 229
           MRCPRCKFFVEK YGCLHI CRC+FEFCYACGS WS  H GC+
Sbjct: 201 MRCPRCKFFVEKTYGCLHITCRCKFEFCYACGSQWSHNHGGCR 243

[Close]

BLAST of Tan0000915 vs. NCBI nr
Match: KAE8646419.1 (hypothetical protein Csa_016113 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 131/192 (68.23%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 39  MFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDTCWEMLPKKVAEKWD 98
           MF I  C HSFC DCVIKHVS KI +GYS +SC +LNC S I+F +CW MLPK++ EKW+
Sbjct: 1   MFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCWRMLPKEIGEKWN 60

Query: 99  KALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLFCATCGVPWHAEATC 158
           KALCE L++  EKV CPFK+CS  + +E+ GA IR+CECP+CHRLFCATC VPWH   TC
Sbjct: 61  KALCEVLYSTEEKVVCPFKDCSVGITLER-GASIRDCECPLCHRLFCATCEVPWHDGVTC 120

Query: 159 EEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHIICRCRFEFCYACGS 218
           EEYK+L ++E   ++ILMK LASQMKWM+CP+C FFVEK+YGCLHI CRCRFEFCYACGS
Sbjct: 121 EEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHITCRCRFEFCYACGS 180

Query: 219 SWSSTHCGCQAN 231
           +WSSTH GCQ N
Sbjct: 181 AWSSTHGGCQPN 191

[Close]

BLAST of Tan0000915 vs. NCBI nr
Match: PNX98112.1 (putative E3 ubiquitin-protein ligase RNF144A-like protein [Trifolium pratense])

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-73
Identity = 127/218 (58.26%), Postives = 160/218 (73.39%), Query Frame = 0


Query: 14  EEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPS 73
           EE NE S S++ +C+IC E K+ E+MF  + C HSFC +CVIK V  KI++  + +SCP 
Sbjct: 77  EESNESSSSSIIICEICAETKKTEEMFNNQSCSHSFCSECVIKQVETKINEKIANVSCPG 136

Query: 74  LNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAV-I 133
           LNC   +E ++C  +LPK++ +KW+ ALCEALF    K +CPFK+CSA ++ E EG   I
Sbjct: 137 LNCKGVLELESCISLLPKELIDKWNDALCEALFCSVPKFYCPFKDCSAMLLDENEGVEDI 196

Query: 134 RECECPICHRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCK 193
           RE ECP CHRLFCA+C VPWH    CEEY+KLN DER SDD++++ LA+Q +W RCP CK
Sbjct: 197 RESECPFCHRLFCASCHVPWHPGIGCEEYQKLNVDERGSDDLVVRELANQKQWRRCPTCK 256

Query: 194 FFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQAN 231
           F+VEK  GCLHI CRCRFEFCYACG  WSSTH GCQ N
Sbjct: 257 FYVEKNGGCLHITCRCRFEFCYACGEQWSSTHGGCQKN 294

[Close]

BLAST of Tan0000915 vs. ExPASy TrEMBL
Match: A0A5A7UU31 (Putative E3 ubiquitin-protein ligase RNF217 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001540 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.5e-82
Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 25  KLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDT 84
           KLC+IC E KE+  MF I+ C HSFC DCVIKHVS KI DGYS +SC +LNCSS I+F +
Sbjct: 3   KLCEICLEYKEEGNMFEIKTCLHSFCRDCVIKHVSTKIGDGYSSVSCLTLNCSSIIDFHS 62

Query: 85  CWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLF 144
           CW MLP + AEKW+KALCE ++ E EKV CPFK+CS  MIVE++ A IR+CECP+CHRLF
Sbjct: 63  CWTMLPNETAEKWNKALCEVVYREEEKVVCPFKDCSVGMIVERD-AKIRDCECPLCHRLF 122

Query: 145 CATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHI 204
           C TC VPWH   TCE+YK+L + E   D+ILMK LASQMKWM+CP+C+FFVEKV GCLHI
Sbjct: 123 CGTCRVPWHEGVTCEDYKRLYKYEDGRDEILMKKLASQMKWMKCPKCQFFVEKVSGCLHI 182

Query: 205 ICRCRFEFCYACGSSWSSTHCGC 228
            CRCRFEFCYACGS+WSSTH GC
Sbjct: 183 TCRCRFEFCYACGSAWSSTHGGC 204

[Close]

BLAST of Tan0000915 vs. ExPASy TrEMBL
Match: A0A5D3CGK1 (Putative E3 ubiquitin-protein ligase RNF217 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001400 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 7.2e-82
Identity = 139/203 (68.47%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 25  KLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDT 84
           KLC+IC E KE+  MF I+ C HSFC DCVIKHVS KI DGYS +SC +LNCSS I+F +
Sbjct: 3   KLCEICLEYKEEGNMFEIKTCLHSFCRDCVIKHVSTKIGDGYSSVSCLTLNCSSIIDFHS 62

Query: 85  CWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPICHRLF 144
           CW MLP + AEKW+KALCE ++ E EKV CPFK+CS  MIVE++ A IR+CECP+CHRLF
Sbjct: 63  CWTMLPNETAEKWNKALCEVVYREEEKVVCPFKDCSVGMIVERD-AKIRDCECPLCHRLF 122

Query: 145 CATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLHI 204
           C TC VPWH   TCE+YK+L + E   D+ILMK LASQMKWM+CP+C+ FVEKV GCLHI
Sbjct: 123 CGTCRVPWHEGVTCEDYKRLYKYEEGRDEILMKKLASQMKWMKCPKCQLFVEKVSGCLHI 182

Query: 205 ICRCRFEFCYACGSSWSSTHCGC 228
            CRCRFEFCYACGS+WSSTH GC
Sbjct: 183 TCRCRFEFCYACGSAWSSTHGGC 204

[Close]

BLAST of Tan0000915 vs. ExPASy TrEMBL
Match: A0A6J1CX43 (probable E3 ubiquitin-protein ligase RNF217 OS=Momordica charantia OX=3673 GN=LOC111015371 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.6e-81
Identity = 144/223 (64.57%), Postives = 171/223 (76.68%), Query Frame = 0


Query: 11  NPLEEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFIS 70
           NP  +    S S+ +LC+IC E+K  + MF IE C HSFC  CVIKHV+AKI+ G S +S
Sbjct: 21  NPSRKSKNSSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVS 80

Query: 71  CPSLNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEG- 130
           CPSL+CS  +EF+TCW MLPK+VAEKWD+ALCEALF EAEKV CPFK+CSAAM+  ++G 
Sbjct: 81  CPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAEKVMCPFKDCSAAMVNLEKGR 140

Query: 131 -AVIRECECPICHRLFCATCGVPWHAEATCEEY---KKLNEDERDSDDILMKNLASQMKW 190
            A I E ECPICHRLFCA C VPWHA  TCEEY   KK  +  R+ DD L+K++A +M+W
Sbjct: 141 SADILESECPICHRLFCAKCRVPWHARVTCEEYQRQKKSKKRGREDDDALLKDMARKMEW 200

Query: 191 MRCPRCKFFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQ 229
           MRCPRCKFFVEK YGCLHI CRC+FEFCYACGS WS  H GC+
Sbjct: 201 MRCPRCKFFVEKTYGCLHITCRCKFEFCYACGSQWSHNHGGCR 243

[Close]

BLAST of Tan0000915 vs. ExPASy TrEMBL
Match: A0A2K3N511 (Putative E3 ubiquitin-protein ligase RNF144A-like protein OS=Trifolium pratense OX=57577 GN=L195_g021354 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 7.2e-74
Identity = 127/218 (58.26%), Postives = 160/218 (73.39%), Query Frame = 0


Query: 14  EEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPS 73
           EE NE S S++ +C+IC E K+ E+MF  + C HSFC +CVIK V  KI++  + +SCP 
Sbjct: 77  EESNESSSSSIIICEICAETKKTEEMFNNQSCSHSFCSECVIKQVETKINEKIANVSCPG 136

Query: 74  LNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAV-I 133
           LNC   +E ++C  +LPK++ +KW+ ALCEALF    K +CPFK+CSA ++ E EG   I
Sbjct: 137 LNCKGVLELESCISLLPKELIDKWNDALCEALFCSVPKFYCPFKDCSAMLLDENEGVEDI 196

Query: 134 RECECPICHRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCK 193
           RE ECP CHRLFCA+C VPWH    CEEY+KLN DER SDD++++ LA+Q +W RCP CK
Sbjct: 197 RESECPFCHRLFCASCHVPWHPGIGCEEYQKLNVDERGSDDLVVRELANQKQWRRCPTCK 256

Query: 194 FFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQAN 231
           F+VEK  GCLHI CRCRFEFCYACG  WSSTH GCQ N
Sbjct: 257 FYVEKNGGCLHITCRCRFEFCYACGEQWSSTHGGCQKN 294

[Close]

BLAST of Tan0000915 vs. ExPASy TrEMBL
Match: A0A1S2XZ66 (probable E3 ubiquitin-protein ligase RNF144A OS=Cicer arietinum OX=3827 GN=LOC101504799 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.4e-71
Identity = 120/218 (55.05%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 14  EEKNEGSESTLKLCDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPS 73
           EE +E   S++ +C+IC E K  ++MF+ + C+HSFC +CV KHV+ KI +  + + CP 
Sbjct: 135 EEASE--SSSIIICEICAEAKMVDEMFKSQKCYHSFCTECVTKHVATKIQENITVVPCPG 194

Query: 74  LNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGA-VI 133
           LNC   +E D C  +LPK+V ++WD ALCEAL     K +CPFK+CSA ++ E EG   I
Sbjct: 195 LNCKGLLELDVCRSLLPKEVIDRWDDALCEALLLSVPKFYCPFKDCSAMLLDENEGGEEI 254

Query: 134 RECECPICHRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCK 193
           RE ECP CHRLFCATC VPWH    C+E++KLN DER   D+L++ LA+Q KW RCP+CK
Sbjct: 255 RESECPFCHRLFCATCHVPWHPSVDCDEFQKLNVDERGIQDLLVRELANQKKWKRCPKCK 314

Query: 194 FFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQAN 231
           F++EK  GCLHI CRCRFEFCYACG  W+S H GCQ N
Sbjct: 315 FYIEKFEGCLHITCRCRFEFCYACGEKWTSNHGGCQRN 350

[Close]

BLAST of Tan0000915 vs. TAIR 10
Match: AT3G53690.1 (RING/U-box superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-55
Identity = 97/213 (45.54%), Postives = 135/213 (63.38%), Query Frame = 0


Query: 15  EKNEGSESTLKL--CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCP 74
           EK + S S      C+IC + K   + FRI  C H +C DCV K+++AK+ D    I CP
Sbjct: 101 EKGQSSSSKTATFDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECP 160

Query: 75  SLNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVI 134
              CS  +E D C ++LPK+V ++W  ALCEA+   ++K +CP+K+CSA + +E+    +
Sbjct: 161 VSGCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKM 220

Query: 135 RECECPICHRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCK 194
           ++ ECP CHR+ C  CG  WH E TCEE++KL  +ER  DDIL+  +A Q KW RCP CK
Sbjct: 221 KDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWKRCPSCK 280

Query: 195 FFVEKVYGCLHIICRCRFEFCYACGS-SWSSTH 225
           F++EK  GCL++ CRC   FCY CG+ S   TH
Sbjct: 281 FYIEKSQGCLYMKCRCGLAFCYNCGTPSRDHTH 313

[Close]

BLAST of Tan0000915 vs. TAIR 10
Match: AT3G14250.1 (RING/U-box superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 3.3e-55
Identity = 96/221 (43.44%), Postives = 142/221 (64.25%), Query Frame = 0


Query: 13  LEEKNEGSESTLKLCDICEEKKEKEKMFR-IEPCFHSFCCDCVIKHVSAKISDGYSFISC 72
           ++ +NE  E + +LC IC ++K    +FR    C H++C DC +++V+ KI +  S I C
Sbjct: 81  IKAENEPMEPSRRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKC 140

Query: 73  PSLNCSSSIEFDTCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEG-A 132
           P + C+  IE  TC +++PK V ++W+K LCE+L +  +K +CPFK+CSA M+  + G A
Sbjct: 141 PDVECTRLIEPYTCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDA 200

Query: 133 VIRECECPICHRLFCATCGVPWHAEATCEEYKKLNEDER---DSDDILMKNLASQMKWMR 192
            + + EC  CHRLFC  C V WHA   C+E+++    ++   D DD L+  +A   +W R
Sbjct: 201 NVTQTECRSCHRLFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRR 260

Query: 193 CPRCKFFVEKVYGCLHIICRCRFEFCYACGSSWSSTHCGCQ 229
           CP CKF+V+KV GC HI CRC ++FCY CGS WSS+H  CQ
Sbjct: 261 CPSCKFYVDKVEGCQHIKCRCGYQFCYGCGSVWSSSH-ACQ 300

[Close]

BLAST of Tan0000915 vs. TAIR 10
Match: AT2G21420.1 (IBR domain containing protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 84/214 (39.25%), Postives = 118/214 (55.14%), Query Frame = 0


Query: 27  CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDTCW 86
           C IC E  + ++MF  E CFH  C  CV +HV   +  G S  +C    C+S + F++C 
Sbjct: 187 CCICRENTDADRMFFTENCFHRQCFSCVNRHVQRMLLCGIS-PTCLHFPCNSELTFESCS 246

Query: 87  EMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECE------CPIC 146
           ++L   + E W + + E L   A+K++CP++ CS  M    + A+ RE +      C  C
Sbjct: 247 KVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSMLM---SKTALSRETDQSNVRACIKC 306

Query: 147 HRLFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYG 206
            RLFC  C VP HA  +C +YKKLN D     D+ +K+LA++ KW +C +C   VE   G
Sbjct: 307 CRLFCIDCKVPSHAGLSCVDYKKLNPD--PLYDVKLKSLANKKKWRQCVQCSNLVELFEG 366

Query: 207 CLHIICRCRFEFCYACGSSWSSTHC---GCQAND 232
           C HI CRC FEFCY CG  W+   C   GC  +D
Sbjct: 367 CNHITCRCGFEFCYVCGKEWNQRGCLSPGCDDDD 394

[Close]

BLAST of Tan0000915 vs. TAIR 10
Match: AT5G37560.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38
Identity = 75/209 (35.89%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 27  CDICEEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFDTCW 86
           C IC +K + E M   + C H  C  CV + V  K+  G     C    C S +  ++C 
Sbjct: 181 CSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRSGI-VPPCLEDGCKSELTLESCS 240

Query: 87  EMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMI---VEKEGAVIRECECPICHRL 146
            +L  K+ E W + + E L  +AEK++CP+++CS  M    + +E        C  C  L
Sbjct: 241 MVLTPKLIEMWKRKMEEDLIPDAEKIYCPYRSCSMLMSKTELSREAEQSNVRACIKCSEL 300

Query: 147 FCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCLH 206
           FC  C VPWH++ +C +YK+++  ER  +D+++K LA+   W +C  CK  +E   GC H
Sbjct: 301 FCIDCKVPWHSDLSCADYKRIH-SERLVNDMMLKVLANDQMWRQCSECKHMIELTEGCNH 360

Query: 207 IICRCRFEFCYACGSSWSS-THCGCQAND 232
           I CRC +EFCY CG  W+   H  CQ  D
Sbjct: 361 ITCRCGYEFCYRCGHKWTKYHHYSCQLMD 387

[Close]

BLAST of Tan0000915 vs. TAIR 10
Match: AT2G26135.1 (RING/U-box protein with C6HC-type zinc finger )

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37
Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 0


Query: 25  KLCDIC-EEKKEKEKMFRIEPCFHSFCCDCVIKHVSAKISDGYSFISCPSLNCSSSIEFD 84
           K C IC ++    + MF I+ C H FC +CV +H+   +  G S I+CPS  C S + + 
Sbjct: 151 KTCTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQG-SLITCPSYRCKSKLTYG 210

Query: 85  TCWEMLPKKVAEKWDKALCEALFTEAEKVFCPFKNCSAAMIVEKEGAVIRECECPI-CHR 144
           +C  +L  KV E W + + E      ++V+CP   CSA M V +   +     C + C  
Sbjct: 211 SCVNILTPKVKEMWIQRMGEDSIPVTDRVYCPNPTCSALMSVTELDQLTGSKRCCVKCGE 270

Query: 145 LFCATCGVPWHAEATCEEYKKLNEDERDSDDILMKNLASQMKWMRCPRCKFFVEKVYGCL 204
            FC  C VPWH   +C+ YKKL+ + R ++D  +  LA+Q  W +C +CK  +E   GC+
Sbjct: 271 SFCIKCKVPWHDNLSCKRYKKLHSN-RTTNDKQLNELANQESWRQCSKCKHMIELTQGCV 330

Query: 205 HIICRCRFEFCYACGS 219
            +ICRC  EFCY CG+
Sbjct: 331 RVICRCGHEFCYGCGA 344

The following BLAST results are available for this feature:

BLAST of Tan0000915 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVW9	2.3e-16	31.13	Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]
Q9SKC4	1.1e-15	27.27	Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana OX=3702 GN=AR...	[more]
F4KGU4	2.5e-15	27.46	ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P0CE10	3.3e-15	27.98	ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9SKC2	5.6e-15	28.85	Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana OX=3702 GN=AR...	[more]

BLAST of Tan0000915 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058684.1	5.1e-82	68.97	putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]	[more]
TYK10490.1	1.5e-81	68.47	putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]	[more]
XP_022146079.1	3.3e-81	64.57	probable E3 ubiquitin-protein ligase RNF217 [Momordica charantia]	[more]
KAE8646419.1	1.2e-78	68.23	hypothetical protein Csa_016113 [Cucumis sativus]	[more]
PNX98112.1	1.5e-73	58.26	putative E3 ubiquitin-protein ligase RNF144A-like protein [Trifolium pratense]	[more]

BLAST of Tan0000915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UU31	2.5e-82	68.97	Putative E3 ubiquitin-protein ligase RNF217 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CGK1	7.2e-82	68.47	Putative E3 ubiquitin-protein ligase RNF217 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CX43	1.6e-81	64.57	probable E3 ubiquitin-protein ligase RNF217 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A2K3N511	7.2e-74	58.26	Putative E3 ubiquitin-protein ligase RNF144A-like protein OS=Trifolium pratense ...	[more]
A0A1S2XZ66	4.4e-71	55.05	probable E3 ubiquitin-protein ligase RNF144A OS=Cicer arietinum OX=3827 GN=LOC10...	[more]

BLAST of Tan0000915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53690.1	1.1e-55	45.54	RING/U-box superfamily protein	[more]
AT3G14250.1	3.3e-55	43.44	RING/U-box superfamily protein	[more]
AT2G21420.1	2.0e-39	39.25	IBR domain containing protein	[more]
AT5G37560.1	2.2e-38	35.89	RING/U-box superfamily protein	[more]
AT2G26135.1	3.1e-37	37.24	RING/U-box protein with C6HC-type zinc finger	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 168..227 e-value: 0.059 score: 15.5 coord: 95..158 e-value: 5.8E-14 score: 62.4
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 177..227 e-value: 1.7E-6 score: 28.1 coord: 96..158 e-value: 7.4E-9 score: 35.7
None	No IPR available	GENE3D	1.20.120.1750		coord: 155..231 e-value: 6.7E-17 score: 64.2
None	No IPR available	PANTHER	PTHR11685:SF327	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 4..218
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 22..104
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 169..228
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 97..163
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 21..107 e-value: 7.2E-17 score: 63.1
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 4..218
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 23..231 score: 25.848455
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 27..72 score: 9.671455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000915.1	Tan0000915.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity