Tan0000876 (gene) Snake gourd v1

Overview


Name	Tan0000876
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	lipid transfer-like protein VAS
Location	LG05: 72592852 .. 72593642 (+)
RNA-Seq Expression	Tan0000876
Synteny	Tan0000876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTGAAGTTTAATAATTTCAATTCAATTTCCATTTTTTCTTGCTTATAAAAATCATTTAATTTGATCAATATATACGACGTCGTTTCTAATTTTCAGAAGGAGCGAACCCACCAACGTCCACACAGACCGGTTCAACCGATGCTACTCCTTCCAATGGTAAATTTTATTTTATTTTATTTTTGGTTAATTTGTTGCATAATTTATCGCTTAATTTGTGGGTAATTCTATTTAAAATGAAAGTTGAATATTATATTATATTAATTAGCAAGTGTTTGATTTTTGTTAATTAAAATTATTATTGAATAATAATTCAGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG

mRNA sequence

ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG

Coding sequence (CDS)

ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG

Protein sequence

MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACNHGYSPSKLPNSSTRMNNNPTYGIGVGFAAAFLFSSANF

Homology

[Close]

BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 45  PCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEAL 104
           PC+Q+ ++PCQPY+     P A CC PL E+V  D  C+C+ FNN  +LK LN+T+  AL
Sbjct: 40  PCIQK-LMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENAL 99

Query: 105 ELPKACGADVHISAC--NHGYSPSKLPNSSTRMNNNPTYGIGVG 147
           +LPKACGA   +S C  + G + S  P ++ +     +   G G
Sbjct: 100 DLPKACGAKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTG 142

[Close]

BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16
Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 38  GLQDQIPPCLQRIILPCQPYIKS---PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLK 97
           G   Q+  CLQ+ +LPCQPYI S   P  PS  CC P+KE+V  D  C+C  FNN ++LK
Sbjct: 25  GGNPQLTACLQK-LLPCQPYIHSLNPPPPPS--CCGPMKEIVEKDAPCLCIAFNNPEVLK 84

Query: 98  VLNVTQSEALELPKACGADVHISACNHGYSPSKL--PNSSTRMNNNPTYGIG-VGFAAAF 153
            LN+T+  AL LPKACG +  +S C+   +PS +  P S+   ++  T       F +AF
Sbjct: 85  ALNLTKENALLLPKACGVNPDVSLCSKIATPSPIASPGSTNGTSSASTISFNRFSFLSAF 142

[Close]

BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12
Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 30  LQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNN 89
           +Q T    G   Q   C+ + ++PCQPYI     P  +CC+P+K++   D+ C+C+ F +
Sbjct: 19  VQVTAQFFGDVQQAMRCVAK-LMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKH 78

Query: 90  EKLLKVLNVTQSEALELPKACGADVHISACN--HGYSPSKLPNSSTRMNNNPT 141
             LL+ L +T+  A+++  +CG +   S CN  +  SP+ LP ++T  N+  T
Sbjct: 79  PDLLRFLALTKENAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGNSFST 130

[Close]

BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-08
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 53  PCQPYIK-SPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACG 112
           PC  YI  +  +P+  CC+ L  +V    DC+C   N       +NV Q++AL LP+AC 
Sbjct: 37  PCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACN 96

Query: 113 ADV-HISACNHG--------YSPSKLPNSSTRMNNNPTYGIGVG 147
                +S CN G         SP++ PNSS   N + T  +G G
Sbjct: 97  VQTPPVSRCNTGGGGGGSTSDSPAESPNSSGPGNGSKTVPVGEG 140

[Close]

BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q6NLF7 (Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=3702 GN=LTPG7 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 31/102 (30.39%), Postives = 48/102 (47.06%), Query Frame = 0


Query: 46  CLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALE 105
           C+ +++ PC   + +   P   CC  +KE V  +L C+C+ + +  LL   NVT  +AL 
Sbjct: 29  CVSKLV-PCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALG 88

Query: 106 LPKACGADVHISACNHGYSPS---KLPNSSTRMNNNPTYGIG 145
           L + C     +SAC    +PS    LP  +   N     G G
Sbjct: 89  LSRRCNVTTDLSACTAKGAPSPKASLPPPAPAGNTKKDAGAG 129

[Close]

BLAST of Tan0000876 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 174.9 bits (442), Expect = 5.6e-40
Identity = 98/171 (57.31%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF AFL LL SSQ+FVGF QDL  FL+GT+SI  L  Q+PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFFAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDRQLPPCM-RQMLSCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  DL C+CSFFNNEK+L  LNV+QS ALELPK CGA++ IS C+
Sbjct: 61  PENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCS 120

Query: 121 HGYSP---SKLPNSST------------------RMNNNPTYGIGVGFAAA 151
           H  SP   ++ P+SST                     NNPTYGIG G AAA
Sbjct: 121 HAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAA 167

[Close]

BLAST of Tan0000876 vs. NCBI nr
Match: XP_038895529.1 (non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_038895530.1 non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida])

HSP 1 Score: 174.5 bits (441), Expect = 7.3e-40
Identity = 105/177 (59.32%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF AFL LL SS+IF GF Q L  F +G DS     D IPPC+Q+ ILPCQP+IK 
Sbjct: 1   MASRRFFAFL-LLISSRIFFGFSQHLGNFFKGMDS-----DLIPPCMQK-ILPCQPFIKL 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACG-ADVHISAC 120
           PENP  VCC PLKEM+ GDL C+CSFFNN ++LK LNVTQS+AL+LPKACG ADV ISAC
Sbjct: 61  PENPLPVCCLPLKEMLAGDLPCLCSFFNNAEMLKSLNVTQSQALKLPKACGAADVDISAC 120

Query: 121 NH-----------------------GYSPSKLPNSSTRMNNNPTYGIGVGFAAAFLF 154
           NH                       G SPSK P+SS+R +NNPTYGI  GFAAA  F
Sbjct: 121 NHHAGPPSTGSTDAPPSPPAPKTSDGSSPSK-PDSSSR-SNNPTYGIDYGFAAASSF 168

[Close]

BLAST of Tan0000876 vs. NCBI nr
Match: XP_023520350.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38
Identity = 96/172 (55.81%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF AFL LL SSQ+FVGF QDL  FL+GT+SI  L  ++PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFFAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDGKLPPCM-RQMLTCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  DL C+CSFFNNEK+LK LNV+QS ALELPK CGA++ IS C+
Sbjct: 61  PENPPPACCTPLKELLDSDLPCLCSFFNNEKMLKTLNVSQSRALELPKNCGAELDISGCS 120

Query: 121 HGYSP---SKLPNSST-------------------RMNNNPTYGIGVGFAAA 151
              SP   ++ P+SST                      NNPTYG G G AAA
Sbjct: 121 DAESPTGSTEGPSSSTTPLTPTANTSGLNDSSTGGATRNNPTYGFGHGVAAA 168

[Close]

BLAST of Tan0000876 vs. NCBI nr
Match: XP_022924146.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38
Identity = 96/172 (55.81%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF+AFL LL SSQ+FVGF QDL  FL+GT+SI  L   +PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFVAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDGNLPPCM-RQMLSCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  D+ C+CSFF+NEK+LK LNV+QS ALELPK CGAD+ IS C+
Sbjct: 61  PENPPPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCGADLDISGCS 120

Query: 121 HGYSP---SKLPNSST-------------------RMNNNPTYGIGVGFAAA 151
              SP   ++ P+SST                      NNPTYGIG G AAA
Sbjct: 121 DAESPTGSTEGPSSSTTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAA 168

[Close]

BLAST of Tan0000876 vs. NCBI nr
Match: KAG6584311.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019904.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.7 bits (426), Expect = 4.0e-38
Identity = 95/171 (55.56%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF+AFL LL SSQ+FVGF QDL  FL+GT+SI  L   +PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFVAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDGNLPPCM-RQMLTCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  D+ C+CSFFNNEK+LK LNV+QS ALELPK CGA++ IS C+
Sbjct: 61  PENPPPACCTPLKELLDSDIPCLCSFFNNEKMLKTLNVSQSRALELPKNCGAELDISGCS 120

Query: 121 HGYSP---SKLPNSST-------------------RMNNNPTYGIGVGFAA 150
              SP   ++ P+SST                      NNPTYGIG G AA
Sbjct: 121 DAESPTGSTEGPSSSTTTTPPTANTSGLNDSSTGGATRNNPTYGIGHGVAA 167

[Close]

BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A6J1KJP7 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40
Identity = 98/171 (57.31%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF AFL LL SSQ+FVGF QDL  FL+GT+SI  L  Q+PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFFAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDRQLPPCM-RQMLSCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  DL C+CSFFNNEK+L  LNV+QS ALELPK CGA++ IS C+
Sbjct: 61  PENPPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCGAELDISGCS 120

Query: 121 HGYSP---SKLPNSST------------------RMNNNPTYGIGVGFAAA 151
           H  SP   ++ P+SST                     NNPTYGIG G AAA
Sbjct: 121 HAESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAA 167

[Close]

BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A6J1E8R9 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 96/172 (55.81%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MAS RF+AFL LL SSQ+FVGF QDL  FL+GT+SI  L   +PPC+ R +L CQPYIKS
Sbjct: 1   MASSRFVAFL-LLISSQMFVGFSQDLSEFLKGTESI--LDGNLPPCM-RQMLSCQPYIKS 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACN 120
           PENP   CC+PLKE++  D+ C+CSFF+NEK+LK LNV+QS ALELPK CGAD+ IS C+
Sbjct: 61  PENPPPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCGADLDISGCS 120

Query: 121 HGYSP---SKLPNSST-------------------RMNNNPTYGIGVGFAAA 151
              SP   ++ P+SST                      NNPTYGIG G AAA
Sbjct: 121 DAESPTGSTEGPSSSTTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAA 168

[Close]

BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A1S3CQ75 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.9e-35
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 6   FLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPS 65
           F AFL+LL  S   VGF QDLDAF +G +S      +IP C+Q+ ILPCQP+IK PENPS
Sbjct: 8   FFAFLILLMFSS--VGFSQDLDAFFKGMES-----GKIPQCMQK-ILPCQPFIKLPENPS 67

Query: 66  AVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACG-ADVHISACNHGYS 125
           A+CC PLKEM+ GD+ C+CSFFN+  +LK LNVTQS+AL+LPKACG ADV ISAC    +
Sbjct: 68  AMCCLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISACGPPPT 127

Query: 126 ---------PSKLPNSS----TRMNNNPTYGIGVGFAAAFLF 154
                    P+K  + S    +R NNNP+ GIG GFAAA  F
Sbjct: 128 GSTDAPPPPPAKTADDSKANGSRRNNNPSKGIGYGFAAASSF 161

[Close]

BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A5D3BJY6 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002450 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 87/155 (56.13%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 13  LFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPL 72
           +FSS   VGF QDLDAF +G +S      +IP C+Q+ ILPCQP+IK PENPSA+CC PL
Sbjct: 1   MFSS---VGFSQDLDAFFKGMES-----GKIPQCMQK-ILPCQPFIKLPENPSAMCCLPL 60

Query: 73  KEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACG-ADVHISACNHGYS------- 132
           KEM+ GD+ C+CSFFN+  +LK LNVTQS+AL+LPKACG ADV ISAC    +       
Sbjct: 61  KEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISACGPPPTGSTDAPP 120

Query: 133 --PSKLPNSS----TRMNNNPTYGIGVGFAAAFLF 154
             P+K  + S    +R NNNP+ GIG GFAAA  F
Sbjct: 121 PPPAKTADDSKANGSRRNNNPSKGIGYGFAAASSF 146

[Close]

BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A0A0LQX5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 82/171 (47.95%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 1   MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKS 60
           MA+   L F VL       VGF ++LD F +G D       +IP C+Q+ ILPCQP+ K 
Sbjct: 1   MAARTILFFAVLTLLIVSSVGFSEELDGFFKGMDEAT----KIPQCMQK-ILPCQPFFKL 60

Query: 61  PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGA-DVHISAC 120
           PE PS++CC PLKEM+ GDL C CSFFN+ ++LKVLN TQS+ L LPKACGA D  ISAC
Sbjct: 61  PEIPSSICCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISAC 120

Query: 121 NHGYSP-----------------SKLPNSSTRMNNNPTYGIGVGFAAAFLF 154
           ++   P                     NSS R  NNP+  IG GFAAA  F
Sbjct: 121 DNDAQPPTGSTDAPPSPPAKTADGSKANSSRRNYNNPSNIIGYGFAAASSF 166

[Close]

BLAST of Tan0000876 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 45  PCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEAL 104
           PC+Q+ ++PCQPY+     P A CC PL E+V  D  C+C+ FNN  +LK LN+T+  AL
Sbjct: 40  PCIQK-LMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENAL 99

Query: 105 ELPKACGADVHISAC--NHGYSPSKLPNSSTRMNNNPTYGIGVG 147
           +LPKACGA   +S C  + G + S  P ++ +     +   G G
Sbjct: 100 DLPKACGAKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTG 142

[Close]

BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 38  GLQDQIPPCLQRIILPCQPYIKS---PENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLK 97
           G   Q+  CLQ+ +LPCQPYI S   P  PS  CC P+KE+V  D  C+C  FNN ++LK
Sbjct: 25  GGNPQLTACLQK-LLPCQPYIHSLNPPPPPS--CCGPMKEIVEKDAPCLCIAFNNPEVLK 84

Query: 98  VLNVTQSEALELPKACGADVHISACNHGYSPSKL--PNSSTRMNNNPTYGIG-VGFAAAF 153
            LN+T+  AL LPKACG +  +S C+   +PS +  P S+   ++  T       F +AF
Sbjct: 85  ALNLTKENALLLPKACGVNPDVSLCSKIATPSPIASPGSTNGTSSASTISFNRFSFLSAF 142

[Close]

BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 30  LQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNN 89
           +Q T    G   Q   C+ + ++PCQPYI     P  +CC+P+K++   D+ C+C+ F +
Sbjct: 19  VQVTAQFFGDVQQAMRCVAK-LMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKH 78

Query: 90  EKLLKVLNVTQSEALELPKACGADVHISACN--HGYSPSKLPNSSTRMNNNPT 141
             LL+ L +T+  A+++  +CG +   S CN  +  SP+ LP ++T  N+  T
Sbjct: 79  PDLLRFLALTKENAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGNSFST 130

[Close]

BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13
Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 30  LQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNN 89
           +Q T    G   Q   C+ + ++PCQPYI     P  +CC+P+K++   D+ C+C+ F +
Sbjct: 19  VQVTAQFFGDVQQAMRCVAK-LMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKH 78

Query: 90  EKLLKVLNVTQSEALELPKACGADVHISACN--HGYSPSKLPNSSTRMNNNPT 141
             LL+ L +T+  A+++  +CG +   S CN  +  SP+ LP ++T   + PT
Sbjct: 79  PDLLRFLALTKENAIKILDSCGINHDPSVCNKTNPSSPAALPEAATSGMHLPT 130

[Close]

BLAST of Tan0000876 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 53  PCQPYIK-SPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACG 112
           PC  YI  +  +P+  CC+ L  +V    DC+C   N       +NV Q++AL LP+AC 
Sbjct: 37  PCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACN 96

Query: 113 ADV-HISACNHG--------YSPSKLPNSSTRMNNNPTYGIGVG 147
                +S CN G         SP++ PNSS   N + T  +G G
Sbjct: 97  VQTPPVSRCNTGGGGGGSTSDSPAESPNSSGPGNGSKTVPVGEG 140

The following BLAST results are available for this feature:

BLAST of Tan0000876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE56	2.4e-17	41.35	Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=37...	[more]
Q1PFD8	1.5e-16	42.15	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]
B3H587	5.2e-12	32.74	Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=37...	[more]
Q9LJ86	5.9e-08	34.62	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q6NLF7	2.9e-07	30.39	Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Tan0000876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001811.1	5.6e-40	57.31	protein YLS3-like [Cucurbita maxima]	[more]
XP_038895529.1	7.3e-40	59.32	non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_...	[more]
XP_023520350.1	2.4e-38	55.81	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924146.1	2.4e-38	55.81	protein YLS3-like [Cucurbita moschata]	[more]
KAG6584311.1	4.0e-38	55.56	Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019904.1 Prot...	[more]

BLAST of Tan0000876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJP7	2.7e-40	57.31	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1	[more]
A0A6J1E8R9	1.1e-38	55.81	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1	[more]
A0A1S3CQ75	5.9e-35	56.17	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=...	[more]
A0A5D3BJY6	1.9e-33	56.13	Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LQX5	1.7e-29	47.95	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV...	[more]

BLAST of Tan0000876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18280.1	1.7e-18	41.35	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	1.1e-17	42.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.1	3.7e-13	32.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.2	3.7e-13	32.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	4.2e-09	34.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 46..116 e-value: 2.1E-13 score: 51.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 46..119
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 39..119 e-value: 1.5E-14 score: 53.9
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 5..140
None	No IPR available	PANTHER	PTHR33044:SF100	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 5..140
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 51..111 e-value: 3.03213E-11 score: 53.9699

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000876.1	Tan0000876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane