
Tan0000876 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTGAAGTTTAATAATTTCAATTCAATTTCCATTTTTTCTTGCTTATAAAAATCATTTAATTTGATCAATATATACGACGTCGTTTCTAATTTTCAGAAGGAGCGAACCCACCAACGTCCACACAGACCGGTTCAACCGATGCTACTCCTTCCAATGGTAAATTTTATTTTATTTTATTTTTGGTTAATTTGTTGCATAATTTATCGCTTAATTTGTGGGTAATTCTATTTAAAATGAAAGTTGAATATTATATTATATTAATTAGCAAGTGTTTGATTTTTGTTAATTAAAATTATTATTGAATAATAATTCAGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG ATGGCGTCGTGGAGATTTTTGGCGTTCCTCGTCCTCTTGTTTTCTTCTCAGATTTTCGTTGGATTCTGTCAAGATCTGGACGCCTTCCTCCAAGGAACCGACTCGATCGTCGGTCTTCAGGATCAAATTCCGCCGTGTTTGCAGAGGATAATTCTTCCGTGTCAACCCTACATAAAGTCGCCGGAAAATCCGTCGGCGGTGTGCTGTTCGCCGTTGAAGGAGATGGTGGGCGGCGATCTGGATTGCATGTGCTCGTTCTTCAACAATGAGAAACTGCTGAAGGTTCTGAATGTTACGCAGAGCGAAGCGTTGGAGCTTCCTAAAGCTTGCGGTGCCGACGTTCATATATCTGCCTGCAACCATGGTTATTCTCCTAGCAAATTACCTAACAGCTCAACCAGGATGAATAATAATCCAACTTATGGGATTGGCGTTGGCTTCGCGGCTGCTTTCCTGTTTTCATCGGCTAACTTCTAG MASWRFLAFLVLLFSSQIFVGFCQDLDAFLQGTDSIVGLQDQIPPCLQRIILPCQPYIKSPENPSAVCCSPLKEMVGGDLDCMCSFFNNEKLLKVLNVTQSEALELPKACGADVHISACNHGYSPSKLPNSSTRMNNNPTYGIGVGFAAAFLFSSANF Homology
BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.9e-08 Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy Swiss-Prot
Match: Q6NLF7 (Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=3702 GN=LTPG7 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07 Identity = 31/102 (30.39%), Postives = 48/102 (47.06%), Query Frame = 0
BLAST of Tan0000876 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima]) HSP 1 Score: 174.9 bits (442), Expect = 5.6e-40 Identity = 98/171 (57.31%), Postives = 116/171 (67.84%), Query Frame = 0
BLAST of Tan0000876 vs. NCBI nr
Match: XP_038895529.1 (non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_038895530.1 non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida]) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-40 Identity = 105/177 (59.32%), Postives = 119/177 (67.23%), Query Frame = 0
BLAST of Tan0000876 vs. NCBI nr
Match: XP_023520350.1 (protein YLS3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38 Identity = 96/172 (55.81%), Postives = 115/172 (66.86%), Query Frame = 0
BLAST of Tan0000876 vs. NCBI nr
Match: XP_022924146.1 (protein YLS3-like [Cucurbita moschata]) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-38 Identity = 96/172 (55.81%), Postives = 116/172 (67.44%), Query Frame = 0
BLAST of Tan0000876 vs. NCBI nr
Match: KAG6584311.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019904.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 168.7 bits (426), Expect = 4.0e-38 Identity = 95/171 (55.56%), Postives = 115/171 (67.25%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A6J1KJP7 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40 Identity = 98/171 (57.31%), Postives = 116/171 (67.84%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A6J1E8R9 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38 Identity = 96/172 (55.81%), Postives = 116/172 (67.44%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A1S3CQ75 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 5.9e-35 Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A5D3BJY6 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002450 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33 Identity = 87/155 (56.13%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of Tan0000876 vs. ExPASy TrEMBL
Match: A0A0A0LQX5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29 Identity = 82/171 (47.95%), Postives = 100/171 (58.48%), Query Frame = 0
BLAST of Tan0000876 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of Tan0000876 vs. TAIR 10
Match: AT1G73550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13 Identity = 37/113 (32.74%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of Tan0000876 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09 Identity = 36/104 (34.62%), Postives = 51/104 (49.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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