Tan0000653 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTCGTCTCTTTTGTGGTTTGGTAGTATGGACGAAGACGAGTGTACCAAACAACTTGAAAGGCTATAGCTCTTAGAGGACGGAAAAGCTCGTGTGGTAGATATTGAAGACGATGAACTGAATATCACAGACAAAAACCTATAACTCTCGACTATTGTTGCGTAAAATTATTTTGCAATACCACAAGTGTACGAGTCAAGTTTTAGTATAGTGATTTAGAGTTCCAAGTATCGTCCTCGGGAATGGGTTTCTAGATTAATTAATTACGAAGATACTTATTCTCAATTTTATCTACAGCAACAAAACATGGATAGGAGGTGAAACAAAAATTAAAGACAAACAAACATGTGGAGACACGAATTTATAGATTTAAAGGAAATTGACCTTGCAAATCAACACTTAATTACACATGCAATGAATAAATGAGATGAATTTATAAACAAGAAGTAAATTACTCAAGAAAGTCTCTTGATCTCTCAAGAGCCTCGCACATACAATAAATCCTATAGTCTCCATATAAAATCTAAGCATGCACGACATTAAGCAACTTCTTTATGTGTTTCCCTTAAACTTCTAAGTCATTCTCATGCCAGAATTCTAAGGGTTTTGACAACCTTGTTCTAATTTAAGTTTTTTCTCTCGAGTCCACTTAAACCAAAGATATAAATGAAATTAAGAATGAATTGCCAAAAATAAAGATCAAAACATACTTCAATACATGGCAAAGAAGTCTTAATAAGCAAACCAAATCCTAACTACAATATTTAGCTACTCTAAATCATATGAAAACTAAGCTAAACATGTAGGAAACGTCTTAGAACGCTATTACAAATTGAAAGAAAGAGGAATTAAACTTATGTGTTGATGCCGGTCCTTCGTCTCCGAGCTCCCGTCTTCGATCTCGAACCTCCACGAATGCTTTGGCTCCCAAAATGCTCTTTTCTCTTTTCTTACAAAGTGTATTTCGAAATTAGGGTGGAAAATCTACCAAATTCGGCTCCCCTTTTACACAATGCATAATGTTCTATTTATAGGCATCATCGGTGCAGCGTTGCAACGTTGTACCCTAAACGCGTGGTAAATAAAGAAAAGCGATCGATGGCGTTGTAACGCGAGCGGCGCGCTGCAACGCCGCTTACCCTAACGCGCGCTTCTTATCGATCCGGCGTTGCGACGCCGCTGCAAGCGCGGCGTTGCAGCGCCCAAGCATCTTGATTTCTTCATGTGCGCTTCCTTATCGAGATAGCGTTGCGACGTTGCCCTAGCAGCGTCGCAACGCTATCGCCTGGGGTCATCAACGCCTTTAATCAGCACATTCGGCGTTGCAATGCTATAGACAGCGTTGCAATGCCATCACCTCGGGTCATCATGCTTGGATTGGTCCTTTCTCTTCTAATTGGTATTATTTTTAGCTCCAAATAGCCTCGTTTTGATCCCGAGTGATCTAATTTGTCTCCAATAGCTCAGTTTAAGCTCTTAACCTGAAATTGAATGAATTAAACACGTAAAAGTCCTGAAATCATCATAAAACTAGCAATAATTAAGCCTAAGGATAACACATTTTGTGTGCTATCAACTATGTGCAGGGTTTTCTCACACAAGCAAATAATCAATGACATTTTCAAGTGTATTGTTCCGAAGATATGGAATCTAGAAGATAAAGTGAAGATTAAAGCTAGTGCAAGGAATACCTTTCTGTGTACTTTCAGGAATGCAAAATAAAAGAAGAGAATCACAGAAGGAGGACCGTGGATTTTCAACAAGGGGATTCTCGTGTTTGAGGAAGTCAAGGGAAATATTCGTTACTCCAACCTGCAATTCAGGTACGCACAATTTTGGGTTCACATAAGGGATTTACTGTTAGTTTGTCATTGCAGGAAATGGGCTAAGGCGATCGGGAACTCCATAGGGACCTTTATGGACGTTGAAACTGATGAAAATGATGAATGTGCGGGAGACTCCCTAAGGATAAAAGTCAAGTTCGATATACAAAAACCCTTATGCAGGGGAACTAACATAAAGGTAGGATCCATGGCTGAGGAAGTCTGGTACCCGATAACTTACGAGAAACTGCAGGAATTCTGTTATCGGTGTAGCAGACTGGGGCATGTGTATAAGGATTGTAAGGAACAACAAGACAAGCTAGAAGGCGCAACTCGGTTTGGATAATGGATAAGGGAAAATAATAGACCAAAAGGACGATCAACGGTACGAAGAAAGGATCAATTTTTTAGGGAAGTAAGTGTTAGTGGCAAAGGGCGATCTAATTTGCAAAACAGTAGAGGCGTTTACGCAACTCAAGCAAGGAAGAAAGACGAAGAAGACTCTCAAACAGATAAAAATCTCCCTTCATTTTCCGACACTGGTTCCGGCGAGGATGACAACAGTCGTGAGGACGTCAGTACGGAAAAGGAAAAGTTACACGGGGAGAAGGAGTGTGAAAGTACACATAATCATCATAACAGTAGTACTGAAAAGGATTGTCACATCTGTATATCTAGTCAGGGTATGTGGATTAGGTTTGTTGAGGAGGCCACGCTTGTTACCGTTGGGAGGAAAATGGAGGCTATGAATGATGGAGTTTTAGGAAAAGGAATAAAAGGAGAAAAGGTTAACGAACCTATCAAGCCAGACTCAGCAGAGTCTAAGGAGCTTATGTCGAACAAACCTAAAGGGAAATGGCTAAAAACTTGGAAGCGACAAACAAAAACAAAACTGGTTGGAATAAGGAAAATGACATACAAACTCAACCATTATTGGTTAGGAAACACAAAGAAGGGAGGGGGGGGGGGGAAGAGGTCGAACATGGTGTGA ATGGTTGTCGTCTCTTTTGTGGTTTGGAAATGGGCTAAGGCGATCGGGAACTCCATAGGGACCTTTATGGACGTTGAAACTGATGAAAATGATGAATGTGCGGGAGACTCCCTAAGGATAAAAGTCAAGTTCGATATACAAAAACCCTTATGCAGGGGAACTAACATAAAGGTAGGATCCATGGCTGAGGAAGTCTGGTACCCGATAACTTACGAGAAACTGCAGGAATTCTGTTATCGGTGTAGCAGACTGGGGCATGTGTATAAGGATTGTAAGGAACAACAAGACAAGCTAGAAGGCGCAACTCGGGAAGTAAGTGTTAGTGGCAAAGGGCGATCTAATTTGCAAAACAGTAGAGGCGTTTACGCAACTCAAGCAAGGAAGAAAGACGAAGAAGACTCTCAAACAGATAAAAATCTCCCTTCATTTTCCGACACTGGTTCCGGCGAGGATGACAACAGTCGTGAGGACGTCAGTACGGAAAAGGAAAAGTTACACGGGGAGAAGGAGTGTGAAAGTACACATAATCATCATAACAGTAGTACTGAAAAGGATTGTCACATCTGTATATCTAGTCAGGGTATGTGGATTAGGTTTGTTGAGGAGGCCACGCTTGTTACCGTTGGGAGGAAAATGGAGGCTATGAATGATGGAGTTTTAGGAAAAGGAATAAAAGGAGAAAAGGTTAACGAACCTATCAAGCCAGACTCAGCAGAGTCTAAGGAGCTTATGTCGAACAAACCTAAAGGGAAATGGCTAAAAACTTGGAAGCGACAAACAAAAACAAAACTGGTTGGAATAAGGAAAATGACATACAAACTCAACCATTATTGGTTAGGAAACACAAAGAAGGGAGGGGGGGGGGGGAAGAGGTCGAACATGGTGTGA ATGGTTGTCGTCTCTTTTGTGGTTTGGAAATGGGCTAAGGCGATCGGGAACTCCATAGGGACCTTTATGGACGTTGAAACTGATGAAAATGATGAATGTGCGGGAGACTCCCTAAGGATAAAAGTCAAGTTCGATATACAAAAACCCTTATGCAGGGGAACTAACATAAAGGTAGGATCCATGGCTGAGGAAGTCTGGTACCCGATAACTTACGAGAAACTGCAGGAATTCTGTTATCGGTGTAGCAGACTGGGGCATGTGTATAAGGATTGTAAGGAACAACAAGACAAGCTAGAAGGCGCAACTCGGGAAGTAAGTGTTAGTGGCAAAGGGCGATCTAATTTGCAAAACAGTAGAGGCGTTTACGCAACTCAAGCAAGGAAGAAAGACGAAGAAGACTCTCAAACAGATAAAAATCTCCCTTCATTTTCCGACACTGGTTCCGGCGAGGATGACAACAGTCGTGAGGACGTCAGTACGGAAAAGGAAAAGTTACACGGGGAGAAGGAGTGTGAAAGTACACATAATCATCATAACAGTAGTACTGAAAAGGATTGTCACATCTGTATATCTAGTCAGGGTATGTGGATTAGGTTTGTTGAGGAGGCCACGCTTGTTACCGTTGGGAGGAAAATGGAGGCTATGAATGATGGAGTTTTAGGAAAAGGAATAAAAGGAGAAAAGGTTAACGAACCTATCAAGCCAGACTCAGCAGAGTCTAAGGAGCTTATGTCGAACAAACCTAAAGGGAAATGGCTAAAAACTTGGAAGCGACAAACAAAAACAAAACTGGTTGGAATAAGGAAAATGACATACAAACTCAACCATTATTGGTTAGGAAACACAAAGAAGGGAGGGGGGGGGGGGAAGAGGTCGAACATGGTGTGA MVVVSFVVWKWAKAIGNSIGTFMDVETDENDECAGDSLRIKVKFDIQKPLCRGTNIKVGSMAEEVWYPITYEKLQEFCYRCSRLGHVYKDCKEQQDKLEGATREVSVSGKGRSNLQNSRGVYATQARKKDEEDSQTDKNLPSFSDTGSGEDDNSREDVSTEKEKLHGEKECESTHNHHNSSTEKDCHICISSQGMWIRFVEEATLVTVGRKMEAMNDGVLGKGIKGEKVNEPIKPDSAESKELMSNKPKGKWLKTWKRQTKTKLVGIRKMTYKLNHYWLGNTKKGGGGGKRSNMV Homology
BLAST of Tan0000653 vs. NCBI nr
Match: CAD6257659.1 (unnamed protein product [Miscanthus lutarioriparius]) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-14 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Tan0000653 vs. NCBI nr
Match: BAS74010.1 (Os01g0714300 [Oryza sativa Japonica Group]) HSP 1 Score: 90.5 bits (223), Expect = 2.6e-14 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0000653 vs. NCBI nr
Match: XP_039815069.1 (uncharacterized protein LOC120677956 [Panicum virgatum]) HSP 1 Score: 90.1 bits (222), Expect = 3.4e-14 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Tan0000653 vs. NCBI nr
Match: CAD6340009.1 (unnamed protein product [Miscanthus lutarioriparius]) HSP 1 Score: 90.1 bits (222), Expect = 3.4e-14 Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Tan0000653 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-13 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Tan0000653 vs. ExPASy TrEMBL
Match: A0A0P0V7D8 (Os01g0714300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0714300 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-14 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0000653 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 6.3e-14 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of Tan0000653 vs. ExPASy TrEMBL
Match: A0A0A0LNB5 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13 Identity = 41/91 (45.05%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Tan0000653 vs. ExPASy TrEMBL
Match: A0A2T7EQ43 (CCHC-type domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G170400 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-13 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Tan0000653 vs. ExPASy TrEMBL
Match: A0A803Q6Y1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-13 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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