Tan0000643 (gene) Snake gourd v1

Overview
NameTan0000643
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionIleal sodium/bile acid cotransporter, putative
LocationLG11: 15854485 .. 15857282 (-)
RNA-Seq ExpressionTan0000643
SyntenyTan0000643
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATCAAAACATCATCCCTTCACAATTTCTACGAAATTTCCTCTCTATAACTTGTACTAGAATCACTGATAAATTTCTCTCTCTAAAATCTAGAACATTCCATCCCTCCACATAAAAAGGAACTGCAAGGCTTTAATCATCAAGTCAAGACAGAGAAGTTAGAACCCACTAGAGATATTGAGATTTTTTGCCCCCAATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGATTTTGACAGAAATGGGATTTTTCTGTAGCATCCATAACCATCTGCTTGACCTGTTGGAGTGGTTCATCACTAATACAAATAAGCTCCAATCTACTTGAAAACTATGTTATTCTACAACTTACAATGGCATGATAACTCTGCCTGTGTCATGCATCAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTACAAGACAGACTCTGGAAGTTGTGTAGTTAAGCAATATTATCATCTAAGAAATAAAGATGGCAGCATCCAGAAAGATGGGCTCTCTCTCTGGTGCTTACAGATCCAGAGGAACCAGATATTGCTGAAGCTTAGTCATCCTAAGATATACCTAAAATCTTGTCCAACAAAAAAAAAGATACATATATTTGAGTGTGTAATTAAAAGTGGTATTGGATGCTATGTTGTTATATTGATAGCAAATATATATATATAAACCTATGTGGTTGTCTATATTCCATGGGATCTAAAATGAAAACAAAAAATAAAACAATTGAGAATCAATCTTTACAAGAACATCAGCTAGAAAGAAATTCTGCAAAGGTGCAAAGAAAAGTGATTGCTTCAAGCGTGTAAACTCCAATTGAGAAACCAGATTAGCAAATAAAAAGAGAATTTCATTTTGTTCTCCCCAGTTCTAACAGTTCTCACTCTAAACCATTTCATACAAATCACTGAGGTAATCATGACAAGAAAAGGAGAGATTTTGATGTTGCACAATGCTCGTATGGCCTGAGATACAAGTTCCTTGCAAACCAAGAATTTTAGTGCTACCAATATTTTTTATGTCCCCAAAATTATTAGGAATATCCAAATTGATAGTCAAATCAACCAATTAAACATTGTTTAAAATGAAAGAAACCAGTAGTTTAAACACTAAGAAGAATGAATATGAGAATCTCACCTTCAAACAGAAATCCCCAACATTTGCTATTATAAAAAACAGCAAAATAGTACAGCAATCAGAGAACTCTGAAGACCAGAATGATACAGAATCCACATCAATTTCAGATAACGAAGTTTTCATCATTTCGATTTGCTTTTCTTCCAGCATGTTAATCAATTCAAAACAATCCAATCATCGAGTTTACACTCTTGTCAGGCCTAAACAAGCACGAACTATAAAATGGGAAAAAAGAAACATTATTCATCCATGTAAACATCTGCCATCATTTTAAAAAACAGAAACAAAATCAGAATTTAATTGGAAGTTTAAACGCAAACAAACAGTCTTATCATAATGGTATTGGCACACAATCTCAAAAGTAAAAACTAAATTAATAATGTATCATTACACGAGCTGTACTGTGAACAAGATTGTTTTACATATCAGCATCGATTCAAAGATTAGTCTAAATCCCCTTTTAAATCAGGAGAGATTGCAACAACACTTAATATCAAACATTAGGAAACAGCAATCAGGGAACTTTGAAGGCATTTCATCATATGGGTCAGGCACATCATAGGTTCTTAACGGGTAGAGAAATCGTACCAGATCAAGAAACAAAGGAAGCTAAAGATTTTGCATTCTAGTATTGAATATTACTCAATGATAAATGCAGTAATCACTACTACTCTTTATAAACAACAAAAACTAGTTCCTGGTGCAGAAATTCAAGGAACCAGTTTCTCCTAATTTGTAGCAAGAGATCGTTGGTGTCCGAGTTTTGTGCAAGTGGCTGTTGACGGCTTCTGTGTTGTGGAATATTGAAACGAACCATTGAGCTGGAGAAAATCTTCCCCAAAACCAAAGATGAAAAGGCCAAAATGAAACCTAGTAGGGAAATTTCAGTACACCATTTTCTCGATTTTTACTCGCAACCAAACTCAAAAGAAGTAAGGGGCTATTTGGTGAATCAGATCATGGAGGAAAAAGGAAATGAATGCTTATGCTTGAGTTGAGTAATGGAATTGTAGGAGACAATCGTTGAGAAGAGCCTGCTTCAGGTTTTGATGATTATGAACGAACAGAATTTATTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTGGGGGATAAATTTTTGATAAATTG

mRNA sequence

GTGATCAAAACATCATCCCTTCACAATTTCTACGAAATTTCCTCTCTATAACTTGTACTAGAATCACTGATAAATTTCTCTCTCTAAAATCTAGAACATTCCATCCCTCCACATAAAAAGGAACTGCAAGGCTTTAATCATCAAGTCAAGACAGAGAAGTTAGAACCCACTAGAGATATTGAGATTTTTTGCCCCCAATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGATTTTGACAGAAATGGGATTTTTCTGTAGCATCCATAACCATCTGCTTGACCTGTTGGAGTGGTTCATCACTAATACAAATAAGCTCCAATCTACTTGAAAACTATGTTATTCTACAACTTACAATGGCATGATAACTCTGCCTGTGTCATGCATCAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTACAAGACAGACTCTGGAAGTTGTGTAGTTAAGCAATATTATCATCTAAGAAATAAAGATGGCAGCATCCAGAAAGATGGGCTCTCTCTCTGGTGCTTACAGATCCAGAGGAACCAGATATTGCTGAAGCTTAGTCATCCTAAGATATACCTAAAATCTTGTCCAACAAAAAAAAAGATACATATATTTGAGTGTGTAATTAAAAGTGGTATTGGATGCTATGTTGTTATATTGATAGCAAATATATATATATAAACCTATGTGGTTGTCTATATTCCATGGGATCTAAAATGAAAACAAAAAATAAAACAATTGAGAATCAATCTTTACAAGAACATCAGCTAGAAAGAAATTCTGCAAAGGTGCAAAGAAAAGTGATTGCTTCAAGCGTGTAAACTCCAATTGAGAAACCAGATTAGCAAATAAAAAGAGAATTTCATTTTGTTCTCCCCAGTTCTAACAGTTCTCACTCTAAACCATTTCATACAAATCACTGAGGTAATCATGACAAGAAAAGGAGAGATTTTGATGTTGCACAATGCTCGTATGGCCTGAGATACAAGTTCCTTGCAAACCAAGAATTTTAGTGCTACCAATATTTTTTATGTCCCCAAAATTATTAGGAATATCCAAATTGATAGTCAAATCAACCAATTAAACATTGTTTAAAATGAAAGAAACCAGTAGTTTAAACACTAAGAAGAATGAATATGAGAATCTCACCTTCAAACAGAAATCCCCAACATTTGCTATTATAAAAAACAGCAAAATAGTACAGCAATCAGAGAACTCTGAAGACCAGAATGATACAGAATCCACATCAATTTCAGATAACGAAGTTTTCATCATTTCGATTTGCTTTTCTTCCAGCATGTTAATCAATTCAAAACAATCCAATCATCGAGTTTACACTCTTGTCAGGCCTAAACAAGCACGAACTATAAAATGGGAAAAAAGAAACATTATTCATCCATGTAAACATCTGCCATCATTTTAAAAAACAGAAACAAAATCAGAATTTAATTGGAAGTTTAAACGCAAACAAACAGTCTTATCATAATGGTATTGGCACACAATCTCAAAAGTAAAAACTAAATTAATAATGTATCATTACACGAGCTGTACTGTGAACAAGATTGTTTTACATATCAGCATCGATTCAAAGATTAGTCTAAATCCCCTTTTAAATCAGGAGAGATTGCAACAACACTTAATATCAAACATTAGGAAACAGCAATCAGGGAACTTTGAAGGCATTTCATCATATGGGTCAGGCACATCATAGGTTCTTAACGGGTAGAGAAATCGTACCAGATCAAGAAACAAAGGAAGCTAAAGATTTTGCATTCTAGTATTGAATATTACTCAATGATAAATGCAGTAATCACTACTACTCTTTATAAACAACAAAAACTAGTTCCTGGTGCAGAAATTCAAGGAACCAGTTTCTCCTAATTTGTAGCAAGAGATCGTTGGTGTCCGAGTTTTGTGCAAGTGGCTGTTGACGGCTTCTGTGTTGTGGAATATTGAAACGAACCATTGAGCTGGAGAAAATCTTCCCCAAAACCAAAGATGAAAAGGCCAAAATGAAACCTAGTAGGGAAATTTCAGTACACCATTTTCTCGATTTTTACTCGCAACCAAACTCAAAAGAAGTAAGGGGCTATTTGGTGAATCAGATCATGGAGGAAAAAGGAAATGAATGCTTATGCTTGAGTTGAGTAATGGAATTGTAGGAGACAATCGTTGAGAAGAGCCTGCTTCAGGTTTTGATGATTATGAACGAACAGAATTTATTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTGGGGGATAAATTTTTGATAAATTG

Coding sequence (CDS)

ATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGA

Protein sequence

MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIALLFGKIGALIAAIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK
Homology
BLAST of Tan0000643 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-47
Identity = 113/156 (72.44%), Postives = 128/156 (82.05%), Query Frame = 0

Query: 12  MNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANS-PQNSLGKIILGL 71
           MNELYSFIT +NERNP I+S           LPICITMQRP P  +S  +N++GK ILGL
Sbjct: 1   MNELYSFITAINERNPEINS-----------LPICITMQRPSPANSSKTENNVGKTILGL 60

Query: 72  TFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIALLFGKIGALIA 131
           TFQAVLALFI++P+S PPLLTHLFAAAVLISFA+S AG+FLQ+  PRIALLF KIGALIA
Sbjct: 61  TFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIA 120

Query: 132 AIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK 167
           AIGV I+ASLLIH NFAWISWLA  FSL+AFVLSF+
Sbjct: 121 AIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of Tan0000643 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46
Identity = 113/167 (67.66%), Postives = 131/167 (78.44%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANS-P 60
           MES+SQQIS+DMN LYS IT++NERNP I           +GLPICI MQ   P  +S  
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEI-----------NGLPICIIMQTASPANSSKT 60

Query: 61  QNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIA 120
           +N++G  ILGLTFQAVLALFI++ +S PPLLTHLF AAVLISFA+S  G+FLQ   PRIA
Sbjct: 61  ENNVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIA 120

Query: 121 LLFGKIGALIAAIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK 167
           LLF KIGALIAAIGV I+ASLLIH NFAWISWLAC FSL+AF+LSF+
Sbjct: 121 LLFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of Tan0000643 vs. NCBI nr
Match: KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.5 bits (410), Expect = 3.0e-36
Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQ 60
           M S  Q +S+DMN+                        ASDGLP    M RPPPP +S Q
Sbjct: 1   MGSTPQHVSIDMNQFCPI------------------QGASDGLPPTTAMPRPPPPPDSSQ 60

Query: 61  --NSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRI 120
             N+LGKI+ GLTFQAVLALFIS P+SCPPLL H+FAAA+LISFALS A LFLQ A PRI
Sbjct: 61  TRNNLGKIVFGLTFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRI 120

Query: 121 ALLFGKIGALIAAIGVFIIASLLI-HHNFAWISWLACAFSLIAFVLSFK 167
           AL  GKIGAL+AAIG   I S+L+ H +F+WI WLAC F+L+AF+LSFK
Sbjct: 121 ALSSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK 151

BLAST of Tan0000643 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-33
Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQ 60
           M S S Q SLDM+   SFI T+++RN G+        T S+ LP+ I MQ+ P       
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGC----CCTPSNCLPVFIRMQQSPQATADSS 60

Query: 61  NSLGKIILGLTFQAVLALFIST-PSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIA 120
             LGKIIL L+FQAVLALFIS+ P+S PPLL H FAAAV ISFA+S A LFL ++ PR A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 LLFGKIGALIAAIGVFIIAS-LLIHHNFAWISWLACAFSLIAFVLSFK 167
            LF K+GAL +A GV  IAS LL+H NFAWI W+AC FS+I F LSFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of Tan0000643 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITW--GTSTASDGLPICITMQRPPPPANS 60
           M S  QQ S+DMN L SFIT +NERN GISS TW  GTST SD LPICI MQRPPP  +S
Sbjct: 1   MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60

Query: 61  PQNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRI 120
              SLGK ILGLTFQAVLALFIS PSS P L T LF AAVLISFA+S AGLFLQ+A PR+
Sbjct: 61  --QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRM 120

Query: 121 ALLFGK 125
           ALLF K
Sbjct: 121 ALLFEK 124

BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 113/156 (72.44%), Postives = 128/156 (82.05%), Query Frame = 0

Query: 12  MNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANS-PQNSLGKIILGL 71
           MNELYSFIT +NERNP I+S           LPICITMQRP P  +S  +N++GK ILGL
Sbjct: 1   MNELYSFITAINERNPEINS-----------LPICITMQRPSPANSSKTENNVGKTILGL 60

Query: 72  TFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIALLFGKIGALIA 131
           TFQAVLALFI++P+S PPLLTHLFAAAVLISFA+S AG+FLQ+  PRIALLF KIGALIA
Sbjct: 61  TFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIA 120

Query: 132 AIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK 167
           AIGV I+ASLLIH NFAWISWLA  FSL+AFVLSF+
Sbjct: 121 AIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46
Identity = 113/167 (67.66%), Postives = 131/167 (78.44%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANS-P 60
           MES+SQQIS+DMN LYS IT++NERNP I           +GLPICI MQ   P  +S  
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEI-----------NGLPICIIMQTASPANSSKT 60

Query: 61  QNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIA 120
           +N++G  ILGLTFQAVLALFI++ +S PPLLTHLF AAVLISFA+S  G+FLQ   PRIA
Sbjct: 61  ENNVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIA 120

Query: 121 LLFGKIGALIAAIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK 167
           LLF KIGALIAAIGV I+ASLLIH NFAWISWLAC FSL+AF+LSF+
Sbjct: 121 LLFEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34
Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQ 60
           M S S Q SLDM+   SFI T+++RN G+        T S+ LP+ I MQ+ P       
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGC----CCTPSNCLPVFIRMQQSPQATADSS 60

Query: 61  NSLGKIILGLTFQAVLALFIST-PSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIA 120
             LGKIIL L+FQAVLALFIS+ P+S PPLL H FAAAV ISFA+S A LFL ++ PR A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 LLFGKIGALIAAIGVFIIAS-LLIHHNFAWISWLACAFSLIAFVLSFK 167
            LF K+GAL +A GV  IAS LL+H NFAWI W+AC FS+I F LSFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.5e-33
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0

Query: 1   MESNSQQISLDMNELYSFITTMNERNPGISSITW--GTSTASDGLPICITMQRPPPPANS 60
           M S  QQ S+DMN L SFIT +NERN GISS TW  GTST SD LPICI MQRPPP  +S
Sbjct: 1   MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60

Query: 61  PQNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRI 120
              SLGK ILGLTFQAVLALFIS PSS P L T LF AAVLISFA+S AGLFLQ+A PR+
Sbjct: 61  --QSLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPRM 120

Query: 121 ALLFGK 125
           ALLF K
Sbjct: 121 ALLFEK 124

BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31
Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = 0

Query: 2   ESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQN 61
           E+   +ISLDMNELYSFIT +  RNPGISS TWGT+ ASD LPI I MQR P P NSPQ 
Sbjct: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTA-ASDCLPIYIKMQR-PSPVNSPQ- 62

Query: 62  SLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIALL 121
             G   +   FQA+L LF++ P S PP L+ L    +L +F  S  G+ LQ   P+IA L
Sbjct: 63  -FGNTFVSSNFQAILGLFLNLPPS-PPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122

Query: 122 FGKIGALIAAIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK 167
               GAL+AAIGV I+ S L+H N  WI WLAC   L AF+ SFK
Sbjct: 123 LQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0050246.18.5e-4772.44putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KGN49803.12.5e-4667.66hypothetical protein Csa_004681 [Cucumis sativus][more]
KAG6579137.13.0e-3657.99hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN49808.11.8e-3356.55hypothetical protein Csa_004650 [Cucumis sativus][more]
XP_022146444.11.6e-3272.22uncharacterized protein LOC111015658 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A5A7U7U14.1e-4772.44Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KJN81.2e-4667.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1[more]
A0A0A0KJP28.9e-3456.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1[more]
A0A6J1CY587.5e-3372.22uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3BEH81.9e-3153.94Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000643.1Tan0000643.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane