Tan0000643 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGATCAAAACATCATCCCTTCACAATTTCTACGAAATTTCCTCTCTATAACTTGTACTAGAATCACTGATAAATTTCTCTCTCTAAAATCTAGAACATTCCATCCCTCCACATAAAAAGGAACTGCAAGGCTTTAATCATCAAGTCAAGACAGAGAAGTTAGAACCCACTAGAGATATTGAGATTTTTTGCCCCCAATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGATTTTGACAGAAATGGGATTTTTCTGTAGCATCCATAACCATCTGCTTGACCTGTTGGAGTGGTTCATCACTAATACAAATAAGCTCCAATCTACTTGAAAACTATGTTATTCTACAACTTACAATGGCATGATAACTCTGCCTGTGTCATGCATCAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTACAAGACAGACTCTGGAAGTTGTGTAGTTAAGCAATATTATCATCTAAGAAATAAAGATGGCAGCATCCAGAAAGATGGGCTCTCTCTCTGGTGCTTACAGATCCAGAGGAACCAGATATTGCTGAAGCTTAGTCATCCTAAGATATACCTAAAATCTTGTCCAACAAAAAAAAAGATACATATATTTGAGTGTGTAATTAAAAGTGGTATTGGATGCTATGTTGTTATATTGATAGCAAATATATATATATAAACCTATGTGGTTGTCTATATTCCATGGGATCTAAAATGAAAACAAAAAATAAAACAATTGAGAATCAATCTTTACAAGAACATCAGCTAGAAAGAAATTCTGCAAAGGTGCAAAGAAAAGTGATTGCTTCAAGCGTGTAAACTCCAATTGAGAAACCAGATTAGCAAATAAAAAGAGAATTTCATTTTGTTCTCCCCAGTTCTAACAGTTCTCACTCTAAACCATTTCATACAAATCACTGAGGTAATCATGACAAGAAAAGGAGAGATTTTGATGTTGCACAATGCTCGTATGGCCTGAGATACAAGTTCCTTGCAAACCAAGAATTTTAGTGCTACCAATATTTTTTATGTCCCCAAAATTATTAGGAATATCCAAATTGATAGTCAAATCAACCAATTAAACATTGTTTAAAATGAAAGAAACCAGTAGTTTAAACACTAAGAAGAATGAATATGAGAATCTCACCTTCAAACAGAAATCCCCAACATTTGCTATTATAAAAAACAGCAAAATAGTACAGCAATCAGAGAACTCTGAAGACCAGAATGATACAGAATCCACATCAATTTCAGATAACGAAGTTTTCATCATTTCGATTTGCTTTTCTTCCAGCATGTTAATCAATTCAAAACAATCCAATCATCGAGTTTACACTCTTGTCAGGCCTAAACAAGCACGAACTATAAAATGGGAAAAAAGAAACATTATTCATCCATGTAAACATCTGCCATCATTTTAAAAAACAGAAACAAAATCAGAATTTAATTGGAAGTTTAAACGCAAACAAACAGTCTTATCATAATGGTATTGGCACACAATCTCAAAAGTAAAAACTAAATTAATAATGTATCATTACACGAGCTGTACTGTGAACAAGATTGTTTTACATATCAGCATCGATTCAAAGATTAGTCTAAATCCCCTTTTAAATCAGGAGAGATTGCAACAACACTTAATATCAAACATTAGGAAACAGCAATCAGGGAACTTTGAAGGCATTTCATCATATGGGTCAGGCACATCATAGGTTCTTAACGGGTAGAGAAATCGTACCAGATCAAGAAACAAAGGAAGCTAAAGATTTTGCATTCTAGTATTGAATATTACTCAATGATAAATGCAGTAATCACTACTACTCTTTATAAACAACAAAAACTAGTTCCTGGTGCAGAAATTCAAGGAACCAGTTTCTCCTAATTTGTAGCAAGAGATCGTTGGTGTCCGAGTTTTGTGCAAGTGGCTGTTGACGGCTTCTGTGTTGTGGAATATTGAAACGAACCATTGAGCTGGAGAAAATCTTCCCCAAAACCAAAGATGAAAAGGCCAAAATGAAACCTAGTAGGGAAATTTCAGTACACCATTTTCTCGATTTTTACTCGCAACCAAACTCAAAAGAAGTAAGGGGCTATTTGGTGAATCAGATCATGGAGGAAAAAGGAAATGAATGCTTATGCTTGAGTTGAGTAATGGAATTGTAGGAGACAATCGTTGAGAAGAGCCTGCTTCAGGTTTTGATGATTATGAACGAACAGAATTTATTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTGGGGGATAAATTTTTGATAAATTG GTGATCAAAACATCATCCCTTCACAATTTCTACGAAATTTCCTCTCTATAACTTGTACTAGAATCACTGATAAATTTCTCTCTCTAAAATCTAGAACATTCCATCCCTCCACATAAAAAGGAACTGCAAGGCTTTAATCATCAAGTCAAGACAGAGAAGTTAGAACCCACTAGAGATATTGAGATTTTTTGCCCCCAATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGATTTTGACAGAAATGGGATTTTTCTGTAGCATCCATAACCATCTGCTTGACCTGTTGGAGTGGTTCATCACTAATACAAATAAGCTCCAATCTACTTGAAAACTATGTTATTCTACAACTTACAATGGCATGATAACTCTGCCTGTGTCATGCATCAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTACAAGACAGACTCTGGAAGTTGTGTAGTTAAGCAATATTATCATCTAAGAAATAAAGATGGCAGCATCCAGAAAGATGGGCTCTCTCTCTGGTGCTTACAGATCCAGAGGAACCAGATATTGCTGAAGCTTAGTCATCCTAAGATATACCTAAAATCTTGTCCAACAAAAAAAAAGATACATATATTTGAGTGTGTAATTAAAAGTGGTATTGGATGCTATGTTGTTATATTGATAGCAAATATATATATATAAACCTATGTGGTTGTCTATATTCCATGGGATCTAAAATGAAAACAAAAAATAAAACAATTGAGAATCAATCTTTACAAGAACATCAGCTAGAAAGAAATTCTGCAAAGGTGCAAAGAAAAGTGATTGCTTCAAGCGTGTAAACTCCAATTGAGAAACCAGATTAGCAAATAAAAAGAGAATTTCATTTTGTTCTCCCCAGTTCTAACAGTTCTCACTCTAAACCATTTCATACAAATCACTGAGGTAATCATGACAAGAAAAGGAGAGATTTTGATGTTGCACAATGCTCGTATGGCCTGAGATACAAGTTCCTTGCAAACCAAGAATTTTAGTGCTACCAATATTTTTTATGTCCCCAAAATTATTAGGAATATCCAAATTGATAGTCAAATCAACCAATTAAACATTGTTTAAAATGAAAGAAACCAGTAGTTTAAACACTAAGAAGAATGAATATGAGAATCTCACCTTCAAACAGAAATCCCCAACATTTGCTATTATAAAAAACAGCAAAATAGTACAGCAATCAGAGAACTCTGAAGACCAGAATGATACAGAATCCACATCAATTTCAGATAACGAAGTTTTCATCATTTCGATTTGCTTTTCTTCCAGCATGTTAATCAATTCAAAACAATCCAATCATCGAGTTTACACTCTTGTCAGGCCTAAACAAGCACGAACTATAAAATGGGAAAAAAGAAACATTATTCATCCATGTAAACATCTGCCATCATTTTAAAAAACAGAAACAAAATCAGAATTTAATTGGAAGTTTAAACGCAAACAAACAGTCTTATCATAATGGTATTGGCACACAATCTCAAAAGTAAAAACTAAATTAATAATGTATCATTACACGAGCTGTACTGTGAACAAGATTGTTTTACATATCAGCATCGATTCAAAGATTAGTCTAAATCCCCTTTTAAATCAGGAGAGATTGCAACAACACTTAATATCAAACATTAGGAAACAGCAATCAGGGAACTTTGAAGGCATTTCATCATATGGGTCAGGCACATCATAGGTTCTTAACGGGTAGAGAAATCGTACCAGATCAAGAAACAAAGGAAGCTAAAGATTTTGCATTCTAGTATTGAATATTACTCAATGATAAATGCAGTAATCACTACTACTCTTTATAAACAACAAAAACTAGTTCCTGGTGCAGAAATTCAAGGAACCAGTTTCTCCTAATTTGTAGCAAGAGATCGTTGGTGTCCGAGTTTTGTGCAAGTGGCTGTTGACGGCTTCTGTGTTGTGGAATATTGAAACGAACCATTGAGCTGGAGAAAATCTTCCCCAAAACCAAAGATGAAAAGGCCAAAATGAAACCTAGTAGGGAAATTTCAGTACACCATTTTCTCGATTTTTACTCGCAACCAAACTCAAAAGAAGTAAGGGGCTATTTGGTGAATCAGATCATGGAGGAAAAAGGAAATGAATGCTTATGCTTGAGTTGAGTAATGGAATTGTAGGAGACAATCGTTGAGAAGAGCCTGCTTCAGGTTTTGATGATTATGAACGAACAGAATTTATTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTGGGGGATAAATTTTTGATAAATTG ATGGAATCAAATTCACAGCAAATTTCCCTAGATATGAATGAACTATATTCCTTCATCACTACAATGAATGAAAGAAATCCTGGAATCAGCAGTATTACCTGGGGAACATCCACAGCATCAGATGGCCTTCCAATTTGCATCACAATGCAGAGGCCTCCTCCACCAGCCAACAGCCCTCAGAATAGCCTTGGGAAGATAATTCTTGGCCTTACTTTTCAGGCTGTTTTGGCCTTGTTCATCAGCACACCCAGTTCATGTCCTCCACTTTTGACACATCTTTTTGCTGCTGCTGTGTTGATTAGCTTTGCACTTTCATGTGCTGGACTTTTCCTTCAAAGTGCACTCCCGAGAATCGCACTTTTGTTCGGAAAGATCGGTGCTCTTATCGCAGCAATTGGCGTGTTCATCATAGCAAGTCTTCTAATCCATCACAACTTCGCTTGGATCTCTTGGCTGGCATGTGCCTTTTCCTTGATAGCCTTTGTTCTATCATTCAAGTGA MESNSQQISLDMNELYSFITTMNERNPGISSITWGTSTASDGLPICITMQRPPPPANSPQNSLGKIILGLTFQAVLALFISTPSSCPPLLTHLFAAAVLISFALSCAGLFLQSALPRIALLFGKIGALIAAIGVFIIASLLIHHNFAWISWLACAFSLIAFVLSFK Homology
BLAST of Tan0000643 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 197.6 bits (501), Expect = 8.5e-47 Identity = 113/156 (72.44%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of Tan0000643 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46 Identity = 113/167 (67.66%), Postives = 131/167 (78.44%), Query Frame = 0
BLAST of Tan0000643 vs. NCBI nr
Match: KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.5 bits (410), Expect = 3.0e-36 Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Tan0000643 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.8e-33 Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0
BLAST of Tan0000643 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia]) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32 Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0
BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47 Identity = 113/156 (72.44%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46 Identity = 113/167 (67.66%), Postives = 131/167 (78.44%), Query Frame = 0
BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34 Identity = 95/168 (56.55%), Postives = 114/168 (67.86%), Query Frame = 0
BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 7.5e-33 Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0
BLAST of Tan0000643 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31 Identity = 89/165 (53.94%), Postives = 106/165 (64.24%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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