Tan0000639 (gene) Snake gourd v1

Overview
NameTan0000639
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG01: 29381358 .. 29385080 (-)
RNA-Seq ExpressionTan0000639
SyntenyTan0000639
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTAGAAGTACTATAGGATCAAACCAAACCAAATCGAACCCCGATCCCATATCAAATAATAGTCTCCATTTGTTCACAGTTTCTGATTCTGACGAGTGCGGCGCCCCATTGAAACCGGTACCTCTCTGGTTTGCTTTCAACTTTGTTCTGCTCCGACGGTATCTCGCCACTGTGAACTCGAACGCCAGTACTCCGATGGCAATTCGGGGGTTTTCGAGGTCGAAATTACCCATTCTTGCTTCGCTATTCCTACGAGCTCCAACTAGTAGACCCATTAGAGATATCCCATTACCAGTTAATTCGACGATTACTGGATTTCAGCCTGATTCGAGCCGACCCATATGCGAATTCCGGCTTTATCACGACGGGAGGCCACGAGGGCCCCTTTGGAGAAGCCGGAAAGCAATTGGAAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATAAAGAGTCACGTTTCGAGGCTCTTGAAATTGGATATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTTAAGGTTTCTTCCTCCTCCTTTTTCTTCAATATGTTCTGTCCTTTTTTGGGTTTTTAACTTCACTTCATAGGGTGCCATAGAAATAGATTATGGGCTTCTGTGAGATACACATCATATCCTTGTCTTACTAATAATTTTTCAGTAATCTTGTAAGTTGTTGCTTTGCGCTTTTGCTGCTTAACTGTTATGTTACTACTTATTAGTTACATTAGGTGAATAGCTTTGCAAGTTCTGGCTTTAAGCTACTATTTTGATCTCGGATTTCTTAGAATATGATTCTCAGCTTCTAGTTTTTTTAGTATGAATATGATGTTCTTGACTTTTGCACTGCCTCCTTTCATGGAGCTATGGTGGAATTTTTTTAATTTGCAGCTCTTCACTTCTTTATGCATGATAATATCCAAATAGAAGCGTGCTTAAGACAGGTCATAAACTTAATAAATTCATGTATTGATGTTCCTTTCAATGATATATTGAATCGTTTTCCCACTTTCTACTAAGTTTTTAGCTTAATTTATGTCGAATGCGGCCCCGTGCATTCGAGTTTCCTTCTCCCTTGGGAATACTGTCTTGTTGCTCTCTTGTTCAATCTGCCCCTTTAAGACAGGCCTACTTCAAACTTTTTGCATGAATCAAGATCTTATATATGAAAGAAACCTAGTTTAGTCAACCTAAGCATAGCTCAACGGGCTAAAACATATGCCTCAATCAAGAGGTCAGATGTTCGAATCCCTCCACCTCCACTTGTTGAACACAAAATATGAAACCTAGTTCAATCTTGTTGCATGTGCAAATGTTTGCTGTTACTGTTAGACTCTTTTGTCTTCAACTCGAGATTGAATTAATTGTACTTCTTCGTTTCTGGGAACCTGACCCACTGCACAGTCTTCCATTGTCGTTATGTTTTCTCTGCCTTACACGCTTGTTGAATTTTCAGATATTTAGGTTGATTCTAAAGCAAGACTGGTACAAGCCTGATGTTTTTATGTACAAAGACTTGATTGTTGCATTATCTAAAAATAAAAAGATGGATGATGCAATGGATTTATGGGAAACCATGAGAAAGGAGAATTTATTCCCTGACACTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACATATATGAGGACATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAGGGTCTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTTGAGGACCTCTTTCCTGACCAGCATGTGTATGACCCCCCCGAAGAGATATTCGGCCTACGTTGAGGTCTGTTTTACCTCAACTCTTTTATCCTCTTTAAATCTTTCTCCTCAATAACGTTGATTTGTTTTTTTTTTTTTGGCTTGTATTATCTGAAGGTTGGTAGCACTTAGTAGACAATCGTAGTAGGCCACTGTATGGTATCTTACAAATTCTTAAATACCAAAAATATTAACTGTTTGAAAGTTATGGGAAAAATGATCGAAACATGCCTTTGAAAGACAGAGTAAAATCAGCTGTCAAGAACATGAAGAATGTAGGATGAATAGTTGGTCAGATATAGTATGAGTCATATGTGGATAGTAGTTGGAACTGTCTTAGGGTTCTCTCATCTTCGATCCCTAGGGAAGAGGATCAAGTGAGTCCTACCGTCCTTGTAATAAACTTGATGCACTATCTTCTTTCAGCCTTTTGAGTGAAGTGCGGCAAAACGCTAAAGGAAGGCAAATTCATAGATCTACCCCATTGTCTCCACTCCGTAGCCATGACAAAAAAACAAGATCTCCCCTTGAATCAATGTTTGGGGGTCAGAAACCTACCATAGAGTCTTGTTCAACAAGTGAAGTGCATTGGTTGTCCAAACTTTTGTTGGGTTAGTAAAGACTTTTGGCAAAGAACACAGAGATAGAATTTTCTTGGATGTAGATGTTCAAAGCGTTTTGTTACTTGAAAGCCTTTGAAAAGCACTCATTTCCCAGGGAAGGACACTTGTTGACCTATTCTGTTTCAATCATACAAATTTCCATCTCATTACTTTGATGTTCTATTTCTTCTATTCCCTCTAGTGTTTATGAAAACTTAGTCAATATATTCAACAGAAGAGGAAAGAACAGCCTAAAAGACTTGGGGATGAGGGGTCTCTAAGCCTAATAAGGAGTATTTGGAAACAAAAGGCATCCAATCTAGATTGATAAAAAAGGGTTGAATATTACAAACAGAATCGTGTAGGGCACTCCAAGTTGAGGCTGTATACGGTACATTTTCACAAAAAGTTTCAAAAGTTGTAAACTCATCTGAGAAAGTTCTACTGTTTCTTTCCTTCCAAAGAAGCCAAAGGTGGCTCAACAAGCATTTGCCCAAAGGACTTTAGCTTTGTCTTTATTCCCTCTAGTATTGGAAACGTTTTCCAACTAATGTATTTTGTGATTGCTTCATCACCTTTTTCTCCTTTCTGTCAACCTCATCAGATGCTTGATCTTGTCGGTTCACCGCTGTTAACGACATTGCAAGAAATGCGATAAGTAGAGGGGTGCTAATAAATTACGTTATAAATATAATAATTGGTAAACCGAAACATCAAACTTTCTCTTGTGGGTCTGTTCTCAAGTACCATATTGACTCTGAATTCATCCTAATCTATTGTAGGTTTGTTCTTTCCCTTTTTCATCATATTGTCTTAAAGAACACGAGTCATTTCAGAGGACGGACACGACAATGGTTTGTCGACAAACATTACATTGGTTTCCCCATGCCAAAACGAAGTGTGAGAAGATTGGCGATATGAAAATGCAAGGAGATGGAGGACATTATCAATGGCGTTCCTCAGAGCCATCGACTTTAGATTCAAAGGATAAGGGAAGAAGATGGTGAAATTCAGTTTGTTGAGTGTTCATTGTCCAAAAAGTTTCTATTTACTGAGGAATGTGAATGCCACAAAGGAATGCAAATGTGTAATTTGTCCTTCAAACTTCTAAAATTCGTATTTTAGTCTTTCTGACGTTTATTAAATTTTATATTTACTTACTATTGTAAAAGGGTTATATTATGGACATGACATATATTAAGTTACATTATATTTTCAAATAAATTAGACACCATACTTCGATCCA

mRNA sequence

AGTTTAGAAGTACTATAGGATCAAACCAAACCAAATCGAACCCCGATCCCATATCAAATAATAGTCTCCATTTGTTCACAGTTTCTGATTCTGACGAGTGCGGCGCCCCATTGAAACCGGTACCTCTCTGGTTTGCTTTCAACTTTGTTCTGCTCCGACGGTATCTCGCCACTGTGAACTCGAACGCCAGTACTCCGATGGCAATTCGGGGGTTTTCGAGGTCGAAATTACCCATTCTTGCTTCGCTATTCCTACGAGCTCCAACTAGTAGACCCATTAGAGATATCCCATTACCAGTTAATTCGACGATTACTGGATTTCAGCCTGATTCGAGCCGACCCATATGCGAATTCCGGCTTTATCACGACGGGAGGCCACGAGGGCCCCTTTGGAGAAGCCGGAAAGCAATTGGAAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATAAAGAGTCACGTTTCGAGGCTCTTGAAATTGGATATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTTAAGATATTTAGGTTGATTCTAAAGCAAGACTGGTACAAGCCTGATGTTTTTATGTACAAAGACTTGATTGTTGCATTATCTAAAAATAAAAAGATGGATGATGCAATGGATTTATGGGAAACCATGAGAAAGGAGAATTTATTCCCTGACACTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACATATATGAGGACATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAGGGTCTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTTGAGGACCTCTTTCCTGACCAGCATGTGTATGACCCCCCCGAAGAGATATTCGGCCTACGTTGAGGTTTGTTCTTTCCCTTTTTCATCATATTGTCTTAAAGAACACGAGTCATTTCAGAGGACGGACACGACAATGGTTTGTCGACAAACATTACATTGGTTTCCCCATGCCAAAACGAAGTGTGAGAAGATTGGCGATATGAAAATGCAAGGAGATGGAGGACATTATCAATGGCGTTCCTCAGAGCCATCGACTTTAGATTCAAAGGATAAGGGAAGAAGATGGTGAAATTCAGTTTGTTGAGTGTTCATTGTCCAAAAAGTTTCTATTTACTGAGGAATGTGAATGCCACAAAGGAATGCAAATGTGTAATTTGTCCTTCAAACTTCTAAAATTCGTATTTTAGTCTTTCTGACGTTTATTAAATTTTATATTTACTTACTATTGTAAAAGGGTTATATTATGGACATGACATATATTAAGTTACATTATATTTTCAAATAAATTAGACACCATACTTCGATCCA

Coding sequence (CDS)

ATGGCAATTCGGGGGTTTTCGAGGTCGAAATTACCCATTCTTGCTTCGCTATTCCTACGAGCTCCAACTAGTAGACCCATTAGAGATATCCCATTACCAGTTAATTCGACGATTACTGGATTTCAGCCTGATTCGAGCCGACCCATATGCGAATTCCGGCTTTATCACGACGGGAGGCCACGAGGGCCCCTTTGGAGAAGCCGGAAAGCAATTGGAAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATAAAGAGTCACGTTTCGAGGCTCTTGAAATTGGATATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTTAAGATATTTAGGTTGATTCTAAAGCAAGACTGGTACAAGCCTGATGTTTTTATGTACAAAGACTTGATTGTTGCATTATCTAAAAATAAAAAGATGGATGATGCAATGGATTTATGGGAAACCATGAGAAAGGAGAATTTATTCCCTGACACTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACATATATGAGGACATGAAGAAGTCTCCAGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAGGGTCTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTTGAGGACCTCTTTCCTGACCAGCATGTGTATGACCCCCCCGAAGAGATATTCGGCCTACGTTGA

Protein sequence

MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEEVALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFPDQHVYDPPEEIFGLR
Homology
[Close]
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.9e-95
Identity = 175/254 (68.90%), Postives = 205/254 (80.71%), Query Frame = 0 

Query: 2   AIRGFSRSKLPILASLFLRAPTSRP-IRDIPLPVNSTITGFQPDSSRPICEF-RLYHDGR 61
           AIR  SR K P  AS+F +  T  P I  I        T   P   +P   F   +HDGR
Sbjct: 3   AIRVCSR-KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGR 62

Query: 62  PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQE 121
           PRGPLWR +K IGKEALFVI GLKR KED+EKL KFIK+HV RLLKLDM+AV+GELERQE
Sbjct: 63  PRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 122 EVALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTY 181
           E ALA+K+F +I KQ+WY+PDVFMYKDLIV+L+K+K+MD+AM LWE M+KENLFPD+QTY
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTY 182

Query: 182 TEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLF 241
           TEVIRGFLR G P+DAMN+YEDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFE+LF
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELF 242

Query: 242 PDQHVYDPPEEIFG 254
           P++H YDPPEEIFG
Sbjct: 243 PEKHAYDPPEEIFG 255

[Close]
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-46
Identity = 83/181 (45.86%), Postives = 130/181 (71.82%), Query Frame = 0 

Query: 71  IGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEEVALAVKIFRL 130
           + KE L   + LKR +    +L +FI SHVSRLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 ILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRGFLRYG 190
           + ++ WY+PD+F Y+D+++ L++NKK+D+   +WE ++KE +  D  T+ +++RGFL   
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 SPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFPDQHVYDPPEE 250
            P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF +LFP   VYDPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

[Close]
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match: Q9FMQ1 (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 0 

Query: 132 LKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRGFLRYGS 191
           +K D   P VF+Y  LI  L K K+M+DA  L++ M    L P   TY  +I G+ + G+
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264

Query: 192 PSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRN--RVKQDFEDL 239
           P  +  + E MK     P  + F  LLKGL    ++ +   V ++ +DL
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313

[Close]
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08
Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 0 

Query: 124 AVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVI 183
           A ++F  ++ +D + PD+  Y  LI    K+K+++D  +L+  M    L  DT TYT +I
Sbjct: 309 AKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 368

Query: 184 RGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL 222
           +G    G   +A  +++ M     PPD + + ILL GL
Sbjct: 369 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405

[Close]
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 0 

Query: 66  RSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEEVALAV 125
           ++ K   ++A+ +I   +  K   EK     K    +LL   ++  L E         A+
Sbjct: 80  KNTKIASRKAISIILRREATKSIIEK-----KKGSKKLLPRTVLESLHERITALRWESAI 139

Query: 126 KIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRG 185
           ++F L+ +Q WYKP+V +Y  LIV L K K+ + A +L++ M  E    + + YT ++  
Sbjct: 140 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 199

Query: 186 FLRYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL 223
           + R G    A  + E MK S +  PD   + IL+K  L
Sbjct: 200 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFL 232

[Close]
BLAST of Tan0000639 vs. NCBI nr
Match: XP_022158131.1 (pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 232/255 (90.98%), Postives = 245/255 (96.08%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIRGFSRSKLPI AS+FLR  T RPIRDIPLPV S ITGFQPDSSRPIC FR YHDGRP
Sbjct: 1   MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKF+KSHVSRLLKLDMI+VLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDVFMYKDLI+AL+ +KKMDDAM+LWE+MRKE+LFPD+QTYT
Sbjct: 121 VALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQ+VYDPPEEIFGLR
Sbjct: 241 DQNVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. NCBI nr
Match: XP_038895593.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida] >XP_038895594.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida] >XP_038895595.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida])

HSP 1 Score: 464.5 bits (1194), Expect = 5.7e-127
Identity = 228/255 (89.41%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIR FSRSKLPI AS+FLR  T RPIRD  LPV STITGFQPDSSRP+  FRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFASVFLRGLTRRPIRDSSLPVKSTITGFQPDSSRPLWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL+KF+KSHV RLLKLDMI+VLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLEKFMKSHVLRLLKLDMISVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDVF+YKDLI+AL+++KKMDDAM LWE+MR+ENLFPD+QTYT
Sbjct: 121 VALAVKIFRLIQKQDWYKPDVFIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHVYDPPEEIFGLR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. NCBI nr
Match: XP_008457435.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo] >KAA0031765.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 225/255 (88.24%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIR FSRSKLPI A +FLR  T RPIRD+PLPV STITGFQPDSSRPI  FRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KF+KSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDV++YKDLI+AL+++KKMDDAM LWE+MR+ENLFPD+QTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMN+YEDMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of Tan0000639 vs. NCBI nr
Match: XP_023519300.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519301.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 7.0e-125
Identity = 221/255 (86.67%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MA+R FS+SKLPI  S+FLR  T+RPIRDI LPV ST+ GFQPDSS+P+  FRLYHDGRP
Sbjct: 1   MAMRWFSKSKLPICYSVFLRGLTTRPIRDISLPVKSTVAGFQPDSSQPLSGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKF+K HV RLLKLDMIAVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVK+FRLI KQ+WYKPDVF+YKDLIVAL+++K+MDDAM+LWE+MRKENLFPD+QTYT
Sbjct: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFL+YGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFE++FP
Sbjct: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHVYDPPEEIFGLR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. NCBI nr
Match: XP_022964699.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964700.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964701.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >KAG7019169.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 221/255 (86.67%), Postives = 240/255 (94.12%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MA+R FS+ KLPI  S+FLR    RPIRDIPLPV ST+ GFQPDSSRP+  FRLYHDGRP
Sbjct: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKF+K HV RLLKLDMIAVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVK+FRLI KQ+WYKPDVF+YKDLIVAL+++K+MDDAM+LWE+MRKENLFPD+QTYT
Sbjct: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFL+YGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFE++FP
Sbjct: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHVYDPPEEIFGLR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match: A0A6J1E045 (pentatricopeptide repeat-containing protein At3g46870 OS=Momordica charantia OX=3673 GN=LOC111024687 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.0e-130
Identity = 232/255 (90.98%), Postives = 245/255 (96.08%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIRGFSRSKLPI AS+FLR  T RPIRDIPLPV S ITGFQPDSSRPIC FR YHDGRP
Sbjct: 1   MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKF+KSHVSRLLKLDMI+VLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDVFMYKDLI+AL+ +KKMDDAM+LWE+MRKE+LFPD+QTYT
Sbjct: 121 VALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRN+VKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNKVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQ+VYDPPEEIFGLR
Sbjct: 241 DQNVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match: A0A5A7SRJ7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00030 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 225/255 (88.24%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIR FSRSKLPI A +FLR  T RPIRD+PLPV STITGFQPDSSRPI  FRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KF+KSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDV++YKDLI+AL+++KKMDDAM LWE+MR+ENLFPD+QTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMN+YEDMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match: A0A1S3C5H5 (pentatricopeptide repeat-containing protein At3g46870 OS=Cucumis melo OX=3656 GN=LOC103497124 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 225/255 (88.24%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIR FSRSKLPI A +FLR  T RPIRD+PLPV STITGFQPDSSRPI  FRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KF+KSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDV++YKDLI+AL+++KKMDDAM LWE+MR+ENLFPD+QTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMN+YEDMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match: A0A0A0LVE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525290 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.8e-126
Identity = 222/255 (87.06%), Postives = 241/255 (94.51%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MAIR FSRSKLP+ AS+FL+  T RPIRD+PLPV STIT FQPDS RPI  FRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KF+KSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVKIFRLI KQDWYKPDV++YKDLI+AL+++KKMDDAM LWE+MR+ENLFPD+QTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFLRYGSPSDAMN+YEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFE+LFP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match: A0A6J1HLK1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464704 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.8e-125
Identity = 221/255 (86.67%), Postives = 240/255 (94.12%), Query Frame = 0 

Query: 1   MAIRGFSRSKLPILASLFLRAPTSRPIRDIPLPVNSTITGFQPDSSRPICEFRLYHDGRP 60
           MA+R FS+ KLPI  S+FLR    RPIRDIPLPV ST+ GFQPDSSRP+  FRLYHDGRP
Sbjct: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKF+K HV RLLKLDMIAVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120

Query: 121 VALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYT 180
           VALAVK+FRLI KQ+WYKPDVF+YKDLIVAL+++K+MDDAM+LWE+MRKENLFPD+QTYT
Sbjct: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180

Query: 181 EVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFP 240
           EVIRGFL+YGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFE++FP
Sbjct: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHVYDPPEEIFGLR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of Tan0000639 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 348.2 bits (892), Expect = 5.6e-96
Identity = 175/254 (68.90%), Postives = 205/254 (80.71%), Query Frame = 0 

Query: 2   AIRGFSRSKLPILASLFLRAPTSRP-IRDIPLPVNSTITGFQPDSSRPICEF-RLYHDGR 61
           AIR  SR K P  AS+F +  T  P I  I        T   P   +P   F   +HDGR
Sbjct: 3   AIRVCSR-KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGR 62

Query: 62  PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQE 121
           PRGPLWR +K IGKEALFVI GLKR KED+EKL KFIK+HV RLLKLDM+AV+GELERQE
Sbjct: 63  PRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 122 EVALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTY 181
           E ALA+K+F +I KQ+WY+PDVFMYKDLIV+L+K+K+MD+AM LWE M+KENLFPD+QTY
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTY 182

Query: 182 TEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLF 241
           TEVIRGFLR G P+DAMN+YEDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFE+LF
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELF 242

Query: 242 PDQHVYDPPEEIFG 254
           P++H YDPPEEIFG
Sbjct: 243 PEKHAYDPPEEIFG 255

[Close]
BLAST of Tan0000639 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-47
Identity = 83/181 (45.86%), Postives = 130/181 (71.82%), Query Frame = 0 

Query: 71  IGKEALFVIQGLKRFKEDEEKLQKFIKSHVSRLLKLDMIAVLGELERQEEVALAVKIFRL 130
           + KE L   + LKR +    +L +FI SHVSRLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 ILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRGFLRYG 190
           + ++ WY+PD+F Y+D+++ L++NKK+D+   +WE ++KE +  D  T+ +++RGFL   
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 SPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEDLFPDQHVYDPPEE 250
            P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF +LFP   VYDPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

[Close]
BLAST of Tan0000639 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 60/177 (33.90%), Postives = 86/177 (48.59%), Query Frame = 0 

Query: 61  RGPLWRSRKAIGKEALFVIQGLKR---------------FKEDEEKLQKFIKSHVSRLLK 120
           R PL R R  +  EA+  +Q LKR                      L + I S   RLLK
Sbjct: 496 RKPLQRGR-MLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLK 555

Query: 121 LDMIAVLGELERQEEVALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWE 180
            DM+AVL EL RQ E +LA+K+F  I K+ WYKP V MY D+I  ++ N  M++   L+ 
Sbjct: 556 FDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYS 615

Query: 181 TMRKE-NLFPDTQTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL 222
            M+ E  L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Sbjct: 616 AMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGL 671

[Close]
BLAST of Tan0000639 vs. TAIR 10
Match: AT5G12100.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 0 

Query: 132 LKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDTQTYTEVIRGFLRYGS 191
           +K D   P VF+Y  LI  L K K+M+DA  L++ M    L P   TY  +I G+ + G+
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264

Query: 192 PSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRN--RVKQDFEDL 239
           P  +  + E MK     P  + F  LLKGL    ++ +   V ++ +DL
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313

[Close]
BLAST of Tan0000639 vs. TAIR 10
Match: AT1G77340.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 8.0e-10
Identity = 33/103 (32.04%), Postives = 61/103 (59.22%), Query Frame = 0 

Query: 117 RQEEVALAVKIFRLILKQDWYKPDVFMYKDLIVALSKNKKMDDAMDLWETMRKENLFPDT 176
           R++EV  A K+F+ + +   ++ +V  Y  LI  L + KK+D+A+ L   M+ +N  P+ 
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEV-SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 261

Query: 177 QTYTEVIRGFLRYGSPSDAMNIYEDMKKSPDPPDELPFRILLK 220
           +TYT +I      G  S+AMN+++ M +S   PD+  + +L++
Sbjct: 262 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303

The following BLAST results are available for this feature:
BLAST of Tan0000639 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STF97.9e-9568.90Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q1PFH74.0e-4645.86Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... [more]
Q9FMQ11.7e-0933.94Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
Q9C8T72.5e-0832.65Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX... [more]
Q9FKC33.3e-0829.11Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
BLAST of Tan0000639 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158131.11.2e-12990.98pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia][more]
XP_038895593.15.7e-12789.41protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Benincasa hispida] >XP_0388955... [more]
XP_008457435.12.8e-12688.24PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo] ... [more]
XP_023519300.17.0e-12586.67protein THYLAKOID ASSEMBLY 8-like, chloroplastic isoform X1 [Cucurbita pepo subs... [more]
XP_022964699.11.2e-12486.67protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964... [more]
BLAST of Tan0000639 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E0456.0e-13090.98pentatricopeptide repeat-containing protein At3g46870 OS=Momordica charantia OX=... [more]
A0A5A7SRJ71.4e-12688.24Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C5H51.4e-12688.24pentatricopeptide repeat-containing protein At3g46870 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0LVE96.8e-12687.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525290 PE=4 SV=1[more]
A0A6J1HLK15.8e-12586.67protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Cucurbita moschata OX=3662 G... [more]
BLAST of Tan0000639 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46870.15.6e-9668.90Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62350.12.8e-4745.86Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G09320.11.2e-1633.90Vacuolar sorting protein 9 (VPS9) domain [more]
AT5G12100.11.2e-1033.94pentatricopeptide (PPR) repeat-containing protein [more]
AT1G77340.18.0e-1032.04Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 139..187
e-value: 1.5E-10
score: 41.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 143..176
e-value: 9.1E-6
score: 23.5
coord: 178..205
e-value: 1.7E-4
score: 19.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 10.533867
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 140..174
score: 10.939435
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 69..255
e-value: 1.3E-55
score: 189.7
IPR044795Pentatricopeptide repeat-containing protein THA8L-likePANTHERPTHR46870PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTICcoord: 4..254
NoneNo IPR availablePANTHERPTHR46870:SF2PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTICcoord: 4..254

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000639.1Tan0000639.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding