Tan0000621 (gene) Snake gourd v1

Overview


Name	Tan0000621
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG07: 4910732 .. 4912187 (-)
RNA-Seq Expression	Tan0000621
Synteny	Tan0000621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTAAATTACAAATAACTTCTCCTCAAGAAAGTTTGCATTAGGGCACTATATAGATAGCTCAACTAATTCCTTAAGAAAGCACAAAACTAAGAAAAGAAAAAGAAAAAATGGCTTCCAAGAAGCTCTTCAAAAGAATTGGAGTTTTGTTGCTTCTAATTGTGTTCCTCTTGGGTACTTGTGTCTCTGCAAAAAGGCCCTTGGTTGCAGCTCCTAATGGTATATTTTCTTTATCTATTTCTTCTGATGTTTGTTTATACAAAAATGTTTGCAAATCATAATTTATTTTAATATTTTTGGCAAAAAGTTCCTTAATTATATTAATAGTTTAGTTTCTAAAAGAAATTAGGTTTATCCTTATACTTATGCTCACCTTAGAACCTAAATTTGACTCATATCAAGTTAAGTCGGTAATTTGATAACAATTTAGGCCCCATTTGATAACTATTTGATTTTTTTTTATTTTTTGTTTTTGAAAACTAAGCCTATAAATACTATTTTCACCTATGAATTTCCTTGTTTCTTATTTATTTTCTACTATGTTTTCAAAAATTAATTTTCAAAATCAAAACCGGTTTTGAAAACTAAAAAAAATTGTTTGATCAGTATTTGGTTTTTTAAAATTATATTTGTTTTCTTATCATTTCATTTTATTAAGAAAATATTTGAATTATTAGCCAAATTTTAAAAATAGAAATAAATTTTAAAAAACTACTTTTGATTTTTTTTAAAGTATATGTAAAAAAGTAGATTATAAAATAAGGAAACTCTAGAATGGAAATAATATTTATAAGTTTAATTTTTAAAAAATTATTTTTATTTTTGAAATTTGATTATCAACAAGTCCTTAGTGGTTGATTTTTCAAAAACCACTAGATATTTATTTATAAAAATAAAAAAGGAAAATTGAAATAAACACGACAGCCGAAGGATCATCCCTAGTGCTTGTAATTTTGACCTTTTTTTTACTAAATGCCTTTTATTAATATTCTTATTTATTAATAAAATTAAAATAGATACTGTGTGTTGATTGAAATTATTGTAGGTGATCATATTGGCGTTAAGGGAGCAAAAATTGATCCACAATTGGCATGGGATGATAGTCCATGGGAAAATGGAGGGTCAGGATCTACTTATCCACCTGGCATTGGTCAAAGAAACACAAATATTAAAACTTAGAAAGAAATGTAATTTCCAATTAATATCCAAGGTGTTATAAAATAATTAGGTTAACATGAGAGAGAGAGATCAGGTTTGCAATATGAACCCAAAAAAAAAAAAAAAGGTTCAACTTGTTGGTTTATAAATCATGTTGTGGGAATTAAGTTGTAAGAGTGTTTTGGGATTGTTAACTATTTGCAATCAACTTTGTTTCATAAAAATTATATTTCAACTTTTCTATTTTTTATCATAGTTTGAAAACGATTTAAATTTATTGTTTAAAATTAAATTGG

mRNA sequence

ATGACTTAAATTACAAATAACTTCTCCTCAAGAAAGTTTGCATTAGGGCACTATATAGATAGCTCAACTAATTCCTTAAGAAAGCACAAAACTAAGAAAAGAAAAAGAAAAAATGGCTTCCAAGAAGCTCTTCAAAAGAATTGGAGTTTTGTTGCTTCTAATTGTGTTCCTCTTGGGTACTTGTGTCTCTGCAAAAAGGCCCTTGGTTGCAGCTCCTAATGGTGATCATATTGGCGTTAAGGGAGCAAAAATTGATCCACAATTGGCATGGGATGATAGTCCATGGGAAAATGGAGGGTCAGGATCTACTTATCCACCTGGCATTGGTCAAAGAAACACAAATATTAAAACTTAGAAAGAAATGTAATTTCCAATTAATATCCAAGGTGTTATAAAATAATTAGGTTAACATGAGAGAGAGAGATCAGGTTTGCAATATGAACCCAAAAAAAAAAAAAAAGGTTCAACTTGTTGGTTTATAAATCATGTTGTGGGAATTAAGTTGTAAGAGTGTTTTGGGATTGTTAACTATTTGCAATCAACTTTGTTTCATAAAAATTATATTTCAACTTTTCTATTTTTTATCATAGTTTGAAAACGATTTAAATTTATTGTTTAAAATTAAATTGG

Coding sequence (CDS)

ATGGCTTCCAAGAAGCTCTTCAAAAGAATTGGAGTTTTGTTGCTTCTAATTGTGTTCCTCTTGGGTACTTGTGTCTCTGCAAAAAGGCCCTTGGTTGCAGCTCCTAATGGTGATCATATTGGCGTTAAGGGAGCAAAAATTGATCCACAATTGGCATGGGATGATAGTCCATGGGAAAATGGAGGGTCAGGATCTACTTATCCACCTGGCATTGGTCAAAGAAACACAAATATTAAAACTTAG

Protein sequence

MASKKLFKRIGVLLLLIVFLLGTCVSAKRPLVAAPNGDHIGVKGAKIDPQLAWDDSPWENGGSGSTYPPGIGQRNTNIKT

Homology

The following BLAST results are available for this feature:

BLAST of Tan0000621 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000621 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000621 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000621 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000621.1	Tan0000621.1	mRNA