Tan0000590 (gene) Snake gourd v1

Overview


Name	Tan0000590
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	LG01: 41888691 .. 41889836 (+)
RNA-Seq Expression	Tan0000590
Synteny	Tan0000590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGTAAACAAAAAAAAGAAAAGAAAAGAAAAAAACCTGCGAAGAGGAGAGTGAAGCAGCGTTGGAGCAAGGCGGCGACAGATGACGACGCGACGGTGTAAAATGTTTCTAACGAAAAAGAAGAAGACAAAACAGAGCCGTTAGCCACAAAACAAAATTGAATAAATCAGACACAGAAATCCATTCTCTAAATGAATTAATTAATCTCGGATACATTCGCATTAATTAATGAATATAACAGACACTTTCCATAAACAAAAACAGATTTGAACTAGAAAAATTCCATATCGGTCATTCATTCATTCTAACGGTCGATTTTGAGAAATTTCCAAAATCAAAGTCTCTTACGCTTATAAATCAAACCCTCTCTTCACCTGCGCTGAATCACAAACTCATTCACTGACAATTCAATTCTACTCATCCTAATGTCTTTCGCTACTTCCACACCCATTCAGTATCGGCTTTACGGCGACCACCACATCGCCCCTTCGCCTTCCGCCCACCATTCCTATCAAGTTCTGGAAGTCCGATTACGCTATCTCCGCCGTCTCGTCTACGTTTCTTCCACCGCCGGAGTTCCTCCCCAAATCCTCCGTGAAACTGCACCCACTCCACTCAACAATGCTCTGTTCCATCTCTCGCTGCCCCAACTCCAAGATCCCTTGTTCTACGTCACCCACTTCCTCTCCTCACTCAACATCCGCGCCGTCGTTTCCCAAGTCATTGCTCCGCATATCGCGTCGTTCATCACCCAAATCGCCGGCGGAAATAGAGAGACAAACTTCCATATCGTCGCCGAGGTCGACTACGTACGACTGATCACCTGGATGGAAACAACTCCTGGATTGTACCAGCCCCAGGGATGGATGAACGTCGATGCAGTGGTGGAAGAGACGGTGGTTCTGGAAGAAGCACCGCCAGCGAGGAGAGGAGTGGCGAAGTCTGCGATGGAGAAATTGGAAGAGAATAGGAAAGAAGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATCGATTGCAAGAAGAGGGAGGTGGTAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATTTTCAAGTGGCTCAACACAAACAATTCTTGCCCCTTGTGCAGAAGGCCATTGCCATTGTACGACTGA

mRNA sequence

ATGAGAAGTAAACAAAAAAAAGAAAAGAAAAGAAAAAAACCTGCGAAGAGGAGAGTGAAGCAGCTTCTGGAAGTCCGATTACGCTATCTCCGCCGTCTCGTCTACGTTTCTTCCACCGCCGGAGTTCCTCCCCAAATCCTCCGTGAAACTGCACCCACTCCACTCAACAATGCTCTGTTCCATCTCTCGCTGCCCCAACTCCAAGATCCCTTGTTCTACGTCACCCACTTCCTCTCCTCACTCAACATCCGCGCCGTCGTTTCCCAAGTCATTGCTCCGCATATCGCGTCGTTCATCACCCAAATCGCCGGCGGAAATAGAGAGACAAACTTCCATATCGTCGCCGAGGTCGACTACGTACGACTGATCACCTGGATGGAAACAACTCCTGGATTGTACCAGCCCCAGGGATGGATGAACGTCGATGCAGTGGTGGAAGAGACGGTGGTTCTGGAAGAAGCACCGCCAGCGAGGAGAGGAGTGGCGAAGTCTGCGATGGAGAAATTGGAAGAGAATAGGAAAGAAGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATCGATTGCAAGAAGAGGGAGGTGGTAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATTTTCAAGTGGCTCAACACAAACAATTCTTGCCCCTTGTGCAGAAGGCCATTGCCATTGTACGACTGA

Coding sequence (CDS)

ATGAGAAGTAAACAAAAAAAAGAAAAGAAAAGAAAAAAACCTGCGAAGAGGAGAGTGAAGCAGCTTCTGGAAGTCCGATTACGCTATCTCCGCCGTCTCGTCTACGTTTCTTCCACCGCCGGAGTTCCTCCCCAAATCCTCCGTGAAACTGCACCCACTCCACTCAACAATGCTCTGTTCCATCTCTCGCTGCCCCAACTCCAAGATCCCTTGTTCTACGTCACCCACTTCCTCTCCTCACTCAACATCCGCGCCGTCGTTTCCCAAGTCATTGCTCCGCATATCGCGTCGTTCATCACCCAAATCGCCGGCGGAAATAGAGAGACAAACTTCCATATCGTCGCCGAGGTCGACTACGTACGACTGATCACCTGGATGGAAACAACTCCTGGATTGTACCAGCCCCAGGGATGGATGAACGTCGATGCAGTGGTGGAAGAGACGGTGGTTCTGGAAGAAGCACCGCCAGCGAGGAGAGGAGTGGCGAAGTCTGCGATGGAGAAATTGGAAGAGAATAGGAAAGAAGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATCGATTGCAAGAAGAGGGAGGTGGTAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATTTTCAAGTGGCTCAACACAAACAATTCTTGCCCCTTGTGCAGAAGGCCATTGCCATTGTACGACTGA

Protein sequence

MRSKQKKEKKRKKPAKRRVKQLLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSLNIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNVDAVVEETVVLEEAPPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLYD

Homology

[Close]

BLAST of Tan0000590 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-11
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 151 LEEAPPARRG---VAKSAMEKL------EENRKEEFGDCSICLDEIDCKKREVVKIPCGH 210
           L E  P R G    +KSA+E L      + N   EF  C++C+D+ + +  E  ++PC H
Sbjct: 186 LAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKH 245

Query: 211 VYHQSCIFKWLNTNNSCPLCRRPLPLYD 230
           +YH+ C+  WL  +NSCP+CR  LP  D
Sbjct: 246 LYHKDCLLPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of Tan0000590 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 155 PPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQSCIFKWLNT 214
           PPA + V +S    +  + K E   C +CL E + ++  V+++PC H++H +CI  WL+ 
Sbjct: 64  PPAAKAVVESLPRTVIRSSKAEL-KCPVCLLEFE-EEETVIEMPCHHLFHSNCILPWLSK 123

Query: 215 NNSCPLCRRPLPLYD 230
            NSCPLCR  LP  D
Sbjct: 124 TNSCPLCRHELPTDD 136

[Close]

BLAST of Tan0000590 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 151 LEEAPPARRG---VAKSAMEKL------EENRKEEFGDCSICLDEIDCKKREVVKIPCGH 210
           L E  P R G    +KSA++ L      ++  K E   C++C+DE +    +V ++PC H
Sbjct: 178 LAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKH 237

Query: 211 VYHQSCIFKWLNTNNSCPLCRRPLPLYD 230
           V+HQ C+  WL  +NSCP+CR  LP  D
Sbjct: 238 VFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of Tan0000590 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.1e-10
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 155 PPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQSCIFKWLNT 214
           PPA + V +S    +  + K +   C +CL E + ++  V+++PC H++H +CI  WL+ 
Sbjct: 64  PPAAKAVVESLPRTVISSAKADL-KCPVCLLEFEAEE-TVIEMPCHHLFHSNCILPWLSK 123

Query: 215 NNSCPLCRRPLPLYD 230
            NSCPLCR  LP  D
Sbjct: 124 TNSCPLCRHELPTDD 136

[Close]

BLAST of Tan0000590 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 155 PPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQSCIFKWLNT 214
           PPA + V ++    +    + E   C +CL E + ++   +++PC H++H SCI  WL+ 
Sbjct: 52  PPAAKTVVENLPRTVIRGSQAEL-KCPVCLLEFE-EEETAIEMPCHHLFHSSCILPWLSK 111

Query: 215 NNSCPLCRRPLPLYD 230
            NSCPLCR  LP  D
Sbjct: 112 TNSCPLCRYELPTDD 124

[Close]

BLAST of Tan0000590 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 6.6e-58
Identity = 116/209 (55.50%), Postives = 150/209 (71.77%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +LEV+  Y  R++ VS   G PP+IL ET   P +NALF+LSL QLQ+PLFY++ FLSSL
Sbjct: 24  VLEVQTSYFERMISVSPVTGRPPRILHETPRIPFHNALFYLSLHQLQNPLFYISQFLSSL 83

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NI     +++A  IAS+I ++   NRE+NF I+AEVD+ R+I WME              
Sbjct: 84  NICPAACEIMARQIASYIDRMINENRESNFRIIAEVDFSRVI-WME-------EHSIYGG 143

Query: 142 DAVVEETVVLEEAPPARRGVAKSAMEKLEE-NRKEEFGDCSICLDEIDCKKREVVKIPCG 201
           DA+ EETVV +EAPP RRGV K A+E++ E   +EE GDC ICL+E+ C+KREV++IPCG
Sbjct: 144 DAMAEETVVFDEAPPPRRGVEKVAVERVRELKSQEELGDCCICLEELSCEKREVIRIPCG 203

Query: 202 HVYHQSCIFKWLNTNNSCPLCRRPLPLYD 230
           HVYH+SC+FKWL  NNSCPLCR+PLPL D
Sbjct: 204 HVYHESCVFKWLRKNNSCPLCRKPLPLND 224

[Close]

BLAST of Tan0000590 vs. NCBI nr
Match: KAG6603237.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 6.6e-58
Identity = 120/213 (56.34%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 15  AKRRVKQLLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYV 74
           A+    + LEVR+R   RL+  SS  GVPPQIL ET PTP+N+ALFHLSL QL DPLF++
Sbjct: 18  AQSETHKALEVRMRSFNRLISASSFTGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHI 77

Query: 75  THFLSSLNIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQ 134
              LS+L+I A   +VI   IAS ITQ++ GNRET+FHIV EVD+++ I WM    G++Q
Sbjct: 78  PRLLSTLDIHAAACEVIGWKIASQITQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMHQ 137

Query: 135 PQGWMNVDAVVEETVVLEEAPPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREV 194
            QG  N   +VEET+VL+E  PARR   +  + ++E   ++E GDC ICLDE+  KKREV
Sbjct: 138 GQG--NGGGLVEETLVLDEL-PARRRQRRGVVARVEVEEEKELGDCCICLDEMMNKKREV 197

Query: 195 VKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPL 228
           ++ PCGHVYH+SCIF+WLN +NSCPLC+RPLPL
Sbjct: 198 IRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPL 226

[Close]

BLAST of Tan0000590 vs. NCBI nr
Match: KAG6603243.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-57
Identity = 119/213 (55.87%), Postives = 154/213 (72.30%), Query Frame = 0


Query: 15  AKRRVKQLLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYV 74
           A+    + LEVR+R   RL+  SS  GVPPQIL ET PTP+N+ALFHLSL QL DPLF++
Sbjct: 18  AQSETHKALEVRMRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHI 77

Query: 75  THFLSSLNIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQ 134
              LS+L+I A   +VI   IAS I Q++ GNRET+FHIV EVD+++ I WM    G++Q
Sbjct: 78  PRLLSTLHIHAAACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMHQ 137

Query: 135 PQGWMNVDAVVEETVVLEEAPPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREV 194
            QG  N   +VEET+VL+E  PARR   +  + ++E   ++E GDC ICLDE+  KKREV
Sbjct: 138 GQG--NGGGLVEETLVLDEL-PARRRQRRGVVARVEVEEEKELGDCCICLDEMMNKKREV 197

Query: 195 VKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPL 228
           ++ PCGHVYH+SCIF+WLN +NSCPLC+RPLPL
Sbjct: 198 IRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPL 226

[Close]

BLAST of Tan0000590 vs. NCBI nr
Match: XP_022928677.1 (E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-55
Identity = 115/201 (57.21%), Postives = 146/201 (72.64%), Query Frame = 0


Query: 27  LRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSLNIRAV 86
           +R   RL+  SS  GVPPQIL ET PTP+N+ALFHLSL QL DPLF++   LS+L+I A 
Sbjct: 1   MRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 60

Query: 87  VSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNVDAVVE 146
             +VI   IAS I Q++ GNRET+FHIV EVD+++ I WM    G+ Q QG  N   +VE
Sbjct: 61  ACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMRQGQG--NGGGLVE 120

Query: 147 ETVVLEEAPPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQS 206
           ETVVL+E  PARR   +  + ++E   ++E GDC ICLDE+  KKREV++ PCGHVYH+S
Sbjct: 121 ETVVLDEL-PARRRQRRGVVARVEVEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHES 180

Query: 207 CIFKWLNTNNSCPLCRRPLPL 228
           CIF+WLN +NSCPLC+RPLPL
Sbjct: 181 CIFQWLNLHNSCPLCKRPLPL 197

[Close]

BLAST of Tan0000590 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-54
Identity = 113/208 (54.33%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +LEVR+ +  +++ +S   G P QIL +T   P +NAL +L+L QLQ PLFY+T FLSSL
Sbjct: 23  ILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNALVYLTLRQLQSPLFYITQFLSSL 82

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NIR   SQ +A  IAS I Q+   N + NFHI+AEVD++R+I W+E            ++
Sbjct: 83  NIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDFIRVI-WLELEE--------QSM 142

Query: 142 DAVVEETVVLEEAPPA-RRGVAKSAMEKLE-ENRKEEFGDCSICLDEIDCKKREVVKIPC 201
            A  EETVV +EAPPA +RGV K+  E+L+ E + E+ GDCSICLDE+ C+KREV++IPC
Sbjct: 143 GAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPC 202

Query: 202 GHVYHQSCIFKWLNTNNSCPLCRRPLPL 228
           GHVYH+SCIFKWL  +NSCPLCR+PLPL
Sbjct: 203 GHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of Tan0000590 vs. ExPASy TrEMBL
Match: A0A6J1EKL4 (E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111435522 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.8e-56
Identity = 115/201 (57.21%), Postives = 146/201 (72.64%), Query Frame = 0


Query: 27  LRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSLNIRAV 86
           +R   RL+  SS  GVPPQIL ET PTP+N+ALFHLSL QL DPLF++   LS+L+I A 
Sbjct: 1   MRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 60

Query: 87  VSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNVDAVVE 146
             +VI   IAS I Q++ GNRET+FHIV EVD+++ I WM    G+ Q QG  N   +VE
Sbjct: 61  ACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMRQGQG--NGGGLVE 120

Query: 147 ETVVLEEAPPARRGVAKSAMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQS 206
           ETVVL+E  PARR   +  + ++E   ++E GDC ICLDE+  KKREV++ PCGHVYH+S
Sbjct: 121 ETVVLDEL-PARRRQRRGVVARVEVEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHES 180

Query: 207 CIFKWLNTNNSCPLCRRPLPL 228
           CIF+WLN +NSCPLC+RPLPL
Sbjct: 181 CIFQWLNLHNSCPLCKRPLPL 197

[Close]

BLAST of Tan0000590 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 9.7e-55
Identity = 113/208 (54.33%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +LEVR+ +  +++ +S   G P QIL +T   P +NAL +L+L QLQ PLFY+T FLSSL
Sbjct: 23  ILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNALVYLTLRQLQSPLFYITQFLSSL 82

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NIR   SQ +A  IAS I Q+   N + NFHI+AEVD++R+I W+E            ++
Sbjct: 83  NIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDFIRVI-WLELEE--------QSM 142

Query: 142 DAVVEETVVLEEAPPA-RRGVAKSAMEKLE-ENRKEEFGDCSICLDEIDCKKREVVKIPC 201
            A  EETVV +EAPPA +RGV K+  E+L+ E + E+ GDCSICLDE+ C+KREV++IPC
Sbjct: 143 GAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPC 202

Query: 202 GHVYHQSCIFKWLNTNNSCPLCRRPLPL 228
           GHVYH+SCIFKWL  +NSCPLCR+PLPL
Sbjct: 203 GHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of Tan0000590 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 9.7e-55
Identity = 113/208 (54.33%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +LEVR+ +  +++ +S   G P QIL +T   P +NAL +L+L QLQ PLFY+T FLSSL
Sbjct: 23  ILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNALVYLTLRQLQSPLFYITQFLSSL 82

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NIR   SQ +A  IAS I Q+   N + NFHI+AEVD++R+I W+E            ++
Sbjct: 83  NIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDFIRVI-WLELEE--------QSM 142

Query: 142 DAVVEETVVLEEAPPA-RRGVAKSAMEKLE-ENRKEEFGDCSICLDEIDCKKREVVKIPC 201
            A  EETVV +EAPPA +RGV K+  E+L+ E + E+ GDCSICLDE+ C+KREV++IPC
Sbjct: 143 GAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPC 202

Query: 202 GHVYHQSCIFKWLNTNNSCPLCRRPLPL 228
           GHVYH+SCIFKWL  +NSCPLCR+PLPL
Sbjct: 203 GHVYHESCIFKWLKNHNSCPLCRKPLPL 221

[Close]

BLAST of Tan0000590 vs. ExPASy TrEMBL
Match: A0A0A0K696 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 113/206 (54.85%), Postives = 147/206 (71.36%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +L+V + ++++++ VS   G P ++L +T   P +NALF+LSL QLQ PLFY+T  LSSL
Sbjct: 23  VLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFYITQILSSL 82

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NIR   SQ +A  IAS I Q+   N ETNFHI+AEVD++RLI W+ +  G          
Sbjct: 83  NIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLI-WLPSMGG---------G 142

Query: 142 DAVVEETVVLEEAPPA-RRGVAKSAMEKL-EENRKEEFGDCSICLDEIDCKKREVVKIPC 201
            A  EETVVL+EAPPA +RGV  +  E+L  E + EE GDCSICLDE+ C+KREV++IPC
Sbjct: 143 GAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPC 202

Query: 202 GHVYHQSCIFKWLNTNNSCPLCRRPL 226
           GHVYH+SCIFKWL  +NSCPLCR+PL
Sbjct: 203 GHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]

BLAST of Tan0000590 vs. ExPASy TrEMBL
Match: A0A0A0K2W2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.8e-53
Identity = 113/206 (54.85%), Postives = 147/206 (71.36%), Query Frame = 0


Query: 22  LLEVRLRYLRRLVYVSSTAGVPPQILRETAPTPLNNALFHLSLPQLQDPLFYVTHFLSSL 81
           +L+V + ++++++ VS   G P ++L +T   P +NALF+LSL QLQ PLFY+T  LSSL
Sbjct: 23  VLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFYITQILSSL 82

Query: 82  NIRAVVSQVIAPHIASFITQIAGGNRETNFHIVAEVDYVRLITWMETTPGLYQPQGWMNV 141
           NIR   SQ +A  IAS I Q+   N ETNFHI+AEVD++RLI W+ +  G          
Sbjct: 83  NIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLI-WLPSMGG---------G 142

Query: 142 DAVVEETVVLEEAPPA-RRGVAKSAMEKL-EENRKEEFGDCSICLDEIDCKKREVVKIPC 201
            A  EETVVL+EAPPA +RGV  +  E+L  E + EE GDCSICLDE+ C+KREV++IPC
Sbjct: 143 GAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPC 202

Query: 202 GHVYHQSCIFKWLNTNNSCPLCRRPL 226
           GHVYH+SCIFKWL  +NSCPLCR+PL
Sbjct: 203 GHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]

BLAST of Tan0000590 vs. TAIR 10
Match: AT1G18770.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 156 PARRGVAKSAMEKLEENRKEEFGD-CSICLDEIDCKKREVVKIPCGHVYHQSCIFKWLNT 215
           PA + V KS   K+ +      G+ C ICL+E   + R VV +PCGH +   C+ KW  T
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEMCIICLEEFS-EGRRVVTLPCGHDFDDECVLKWFET 93

Query: 216 NNSCPLCRRPLP 227
           N+SCPLCR  LP
Sbjct: 94  NHSCPLCRFKLP 104

[Close]

BLAST of Tan0000590 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 151 LEEAPPARRG---VAKSAMEKL------EENRKEEFGDCSICLDEIDCKKREVVKIPCGH 210
           L E  P R G    +KSA++ L      ++  K E   C++C+DE +    +V ++PC H
Sbjct: 178 LAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKH 237

Query: 211 VYHQSCIFKWLNTNNSCPLCRRPLPLYD 230
           V+HQ C+  WL  +NSCP+CR  LP  D
Sbjct: 238 VFHQDCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of Tan0000590 vs. TAIR 10
Match: AT2G29840.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 37/104 (35.58%), Postives = 50/104 (48.08%), Query Frame = 0


Query: 129 TPGLYQPQGWMNVDAVVEETVVLEEAPPARRGVAKSAMEKLEENRKEEFGD---CSICLD 188
           T   + PQ    + A   ET      P ++  V +S   K  +   +  G+   CSICL+
Sbjct: 191 TEEAFHPQFEQVLQASFNETNTARLKPASKLAV-ESLNRKTYKKASDVVGENEMCSICLE 250

Query: 189 EIDCKKREVVKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLYD 230
           E D   R +V +PCGH +   C  KW  TN+ CPLCR  LP  D
Sbjct: 251 EFD-DGRSIVALPCGHEFDDECALKWFETNHDCPLCRFKLPCED 292

[Close]

BLAST of Tan0000590 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 141 VDAVVEETVVLEEAPP-ARRGVAKSAMEKLEENRKEEFGD-------CSICLDEIDCKKR 200
           V  + E  V+    P    RG +     +L E ++ E  D       CSIC+++      
Sbjct: 112 VTYIKERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHE 171

Query: 201 EVVKIP-CGHVYHQSCIFKWLNTNNSCPLCRR 224
           +++++P C H++HQ C+F+WL   NSCPLCR+
Sbjct: 172 DIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203

[Close]

BLAST of Tan0000590 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 155 PPARRGVAKS--AMEKLEENRKEEFGDCSICLDEIDCKKREVVKIPCGHVYHQSCIFKWL 214
           PPA      S  +++   ++   +   C++C++E      +  ++PC H+YH+ CI  WL
Sbjct: 197 PPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEF-IVGGDATELPCKHIYHKDCIVPWL 256

Query: 215 NTNNSCPLCRRPLPL 228
             NNSCP+CRR LPL
Sbjct: 257 RLNNSCPICRRDLPL 270

The following BLAST results are available for this feature:

BLAST of Tan0000590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	3.7e-11	38.64	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q6AXU4	3.1e-10	40.00	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
Q8LPN7	3.1e-10	38.64	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9CY62	9.1e-10	38.67	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1	[more]
Q9P0P0	1.0e-08	37.33	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1	[more]

BLAST of Tan0000590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883574.1	6.6e-58	55.50	E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]	[more]
KAG6603237.1	6.6e-58	56.34	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
KAG6603243.1	3.3e-57	55.87	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_022928677.1	1.8e-55	57.21	E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata]	[more]
XP_016899530.1	2.0e-54	54.33	PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 ...	[more]

BLAST of Tan0000590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKL4	8.8e-56	57.21	E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3E1S5	9.7e-55	54.33	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUZ4	9.7e-55	54.33	E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ...	[more]
A0A0A0K696	1.8e-53	54.85	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 P...	[more]
A0A0A0K2W2	1.8e-53	54.85	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 P...	[more]

BLAST of Tan0000590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18770.1	2.2e-11	44.44	RING/U-box superfamily protein	[more]
AT3G19950.1	2.2e-11	38.64	RING/U-box superfamily protein	[more]
AT2G29840.1	3.8e-11	35.58	RING/U-box superfamily protein	[more]
AT5G37200.1	1.1e-10	32.61	RING/U-box superfamily protein	[more]
AT1G60360.1	1.4e-10	36.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 180..221 e-value: 4.4E-8 score: 42.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 179..222 e-value: 1.0E-13 score: 51.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 180..222 score: 13.610506
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 157..228 e-value: 1.8E-19 score: 70.9
None	No IPR available	PANTHER	PTHR22765:SF329	SUBFAMILY NOT NAMED	coord: 45..223
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 45..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 179..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000590.1	Tan0000590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity