Tan0000573 (gene) Snake gourd v1

Overview


Name	Tan0000573
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Serine/arginine-rich splicing factor
Location	LG09: 8941324 .. 8946506 (-)
RNA-Seq Expression	Tan0000573
Synteny	Tan0000573

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACACTATAAAAATTTGGTTCTCGCTTTGCACTCTCGATTTTTCCAGAAGCTAAGAAATCTTCAAGAATCTGCTTCTCTATTTTCTCTCTAGCCCTAAAATCACCAGGTATGGATTTCTCTCTTCTAACTCGCATTCTTCTTTTCGAATTGCTGATTTCGATTCTTCGATAGAAGAGAATTCAAGAAAACAAAAAAAAGCAAAAAGATCTCGTCATTTCGCCTGTTGATTTTCTTTTTCATTTCGATTTTGTGTTAATTTTGATAGCCATGGTGATGATTGATGACTATGGTTATGGCTCAATAGGTTATTTTCCTCCATCCCTCTTTTAATCTATACGATGTTGTTTCATTGTATGGTGCAATTTTTATTAACATCCATTCTTATCCTTTTTCAAGATTTTATTTTTATTGTACACGAGAAAGGAGACGATGAGCAGCAGAAATAGTCGCACCATCTATGTTGGTAATCTTCCTGGAGATATTCGTTTGAGAGAAGTTGAAGATCTGTTCTACAAGGTTTGATTTCCTTAAATAATTCTTTTTATGTAATCGTACTTATTTTGGTGAAATTTTAGTGTTTAAGAATTCTTGGTGTTATGTTGAGTGTTTCCCGACTAATTCTAGCTTGATTGCAGTATGGACCCATTGTCGACATTGATTTGAAGATTCCCCCACGCCCACCGGGCTATGCTTTTGTGGAGGTGAGGTTAAATCTTGACGCATTTGGAACACTGTCTCTGTGGTTGGAACATTTTTCATCGGAGCCCCTTCAAATTGTGTTTTTATCTTTTTGGGCGTTAAAGAGTTCAAGTAGTTGCACCGAGCCGTTGGTGGTCCTTAATGGCAAACTTTTATTGTCTTCATATTTTTCAGTTTGAAGATGTTCGTGATGCTGAAGATGCAATTTATGGCCGAGATGGATATAAGTTTGATGGATGTCGTTTACGGGTAAGTTGTAATTGCTGATATTGTTCTCTTTGGTGTCTTATCCACGTATCAAAATATAATGTTGCAATGCTTGTTTTGTAGGTGGAATTTGCGCATGGTGGAAGGGGACATTCTTCTTCAATAGATCGTTATAGTCGTAGTGGGAGTAGCCGTGGTGGTGTTTCTCGGCGAACTGACTATCGTGGTTTGTATTTTATTTACTGCTAGTGTGGAAGTCTGATGATACTATTGTGACGGTATTTTGTTTGTACAGTTTTGGTCACTGGATTACCACCTTCTGCTTCATGGCAAGACCTGAAGGTAAGCACAATATTTCTGTTTCTGGAAATAGCCTACTAATATAGTAAGTTTTCCTTTTCTTTGTTCGATCATAGCCTCCTTGTTTAATAGACACAAAGTACATGGCTTCTCTCTCTTCTACGAATTGATAGTTTGCTCTGTGAATTTAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAAGTTTTCCGTGATCGTGGTGGTATGTCATATTGATTTATTTGTCCTTCTATTTCCTGCATATGACTCATTTAAACTCGTGGTTATATTTTTCATCTTTTGCTGGAATGGAAGCACATGTTTGACCTGATAGCTTAATGCAGATTGATAATAGTATTACAATCAAAGATGACTGTAAATCAGAAAATTTTATAAAATTATTTAAATTAATAATTAAATTGTTTTTACTTCCAACTAAGTTATGCATTTTGTTATTACAATTTACATTTATATTGGAGTTAATTGATGATATCTTTTTATGTTTTTTGTGTATTTATAAAAGATATTGGAAATATCGATTCTGATTTTCGGATATATCGATGATATGACATATAGACGGATATTTTTATCCTTGCTTACCATATAGCAACCTTTATATCTTACTCGAGAAATGATCATTCTTATTTCGGAACACCTTCTAGCCTTTATTAAGATGAGGTCAATTTAGGGTTGTCTGATTGGTTCTATCTCAATAAGTATCTAGATTAATGATATACAGGAGACTAGTTATAAGGTCGATTGATCTGAAATCTTTGACTCTCTAAGTACCTGGGATAAGACAAATACAACTTACATTCATATTTGGATCATTAATCTCTCTCATAAAAATTACCTAACAAGTTGCTCAAATCTCCCTTGGTCAAGTCTGGATTCTCTTGAAATTGCTTTTGCGTTTTGGCCATTCCATCAAGTTATTGATGCCCAATTATGTTTTTCATTTTTTATTTTTTTCTCCTGCTATTGAGATGGTAGGTTGAGTTGGAGGATCTATTTCACTTTATGAGCTTAGATGTGTGGAAAATGTCATGTACACTGTAAAAAGTCTGAATGTTTCCAGTCTTCTCATATCTTTTACCTAAAAATCTGTGCAGGGATGGCAGGAATAGTAGATTATACAAACTATGATGACATGAAATATGCTGTAAGTTGCTTTTTGGATGGTCGTACTTTATAATGTCTTTTCTGGAAGATTTGCTTCAAGTTTAATGGTGACAGTCTTTTGTTTTGGATTTTTCGTTTATGTGGTAACATATGTTATTTATGTTTGTAATTTGTAATCTGGCTTATTTATGCAGATAAGAAAACTTGATGATTCTGAATTTCGAAATGCCTTTTCTCGTGCGTATGTACGGGTATGTGGACTGGAAGTTTATTTATTGTCCTAAATTCTGTTTTGTTACTAATAATTTGTGTAATAATACACAGGTGAAGGAATATGACTCTAGGCGCAGTTATTCCAGAAGTCCTTCTCGTGATTCTAGACGAAGTTATCATTCTAAAAGTCCTAGTCGTAGTCCTTATAGGGAAAGAGGCCGGAGCCGAAGTAGAAGTAGAAGTCGAACTCGAAGCCTTAGTCATAGCCGTAGTCGTAGTCATAGTGGCAGGAGCACAAGGTATATTTTGGTTTTCTTGCAAAATTAAGACTAAATGTTGAATCATGAAAATTAAAATGACGTCATATTTTGTTTTGTAGTCTGTCCCCAAGGCTCAAGCACTCTCATCGGTCACCGTCAATTTCTGAACAATCCCGATCAAAGTCTCTTTCAAGGTTTGCGGAATTCCTTCACCCTATAATTTAATCTTCCTTTCCTTAAAACGGTATCTGACTTCACTGTTGCTTTGGTGCTATTCTTTATAAAATGGATGTCTAGTCTAGGTTTGTGTTGTTCCCATTGATGAAGATATCCACGTGGTTCCCATCTCTCTTTAATCTGAACAATTTAATGTGTTTGACAGCTCTACAAATATGTTGAGTTATGCTTACCTACTGTTGACACGTTGCGTTTGTGGTCATCAAGTCTCTTCATTATGTAAAAATATAAGGGGCCATTTAGTAACTATTTATTTGTTGTTTCTTGTTGGAAAATGTGCGTGGGTAACTCTTTCTGTTTCTTGCTTTTCATTTTTTTCTTGAAATGTTCACACTACTTTTGTTTGTACACATACTTTTATATACACACTACTTTTATAGTAAAGCTTTCCTTTTTTGGAAAAAAGGTTCAGAGAACAAAAACTAAGAATGCTTCATGCATTTACTCATTGGCTCATCTGGAGTAGATAAGTGGGTTAAGGACATAAGAAATGAAAGAAAAGAAGAAAAGAAAAAGATAGGTGGTAACCAATGGGGTTCTTAATCCTCCTAGTCGCATGGTTCAGTAGAATCTGCTTGTTGACATTGTTTTGATGCAAGGATTCTTGTATCTTTTATTTTTTAATTGTGGTTTTCAAGCATTCAGAGGAGGATAAATGTATTAATATTCTCGAGAACCCTTCTTCCACCATTTGAATTTTTTGTGCAATTTTCCTGATTTACGGTAGCGAAATCTTTTGCCCCCGACTTTTTTCCTCTATCCTTTTTTCTTTTTCTTTTTTGTTTTTTTTTTTTTTAAAAAATTGTTTTTACTTTTATTTTTTATTTTTATTTTTCCTTTGGGTATGATCGGGGTTAACAAAATAGAGGTTTGGGCAGTCATCATTGTTTGTTTATGTTTTGCTAGATATGGGCTTTTGCGGAATAATTGGGACTTCATGTTAGGGACTTGAGGGATGTGGTGCTCAATGTGCTTCTTTCAACTCTTTGGTTGTTGAGGTAATACAGTTTTGTTGACGAGCACCCCGACAACCTCGATGATAATGATTCTTTCCCTTTCCCTCATGCATGTTTCCCAATTGAATGGAAAAGCTCGATGAGTTGCAATTCTCTAATTGTGTCTGGTCTGTTGAGAATTATTTTTCTCTGAAACGTGCTGCTGTTTAGTGCCTAAAACTTTGACCCACATCAATTCTACAGTAGTTTGAGTCAAAGTTTGAATGTTCTTCCCTCTCCCTGTTCTGTTGTCGGACTGTTTATTCGCTTGAATTCTATACTTCTAATCAACTCTTGATGACCTGGGACGAATGAATGGAGCGGAGCTTGGAAACCAGTCTTCTATATATGGCTTTATTGTTAACTGTGGACAGTATCATTTGCACTTTCAGCTGTAAACCCAGAATTCTCTATGGATACTTTATGTTCTTTTGTTTATTGATTCAAGGTCAGGGTCGAGATCCAGATCAAGATCCAGATCAGGATCTCCAATTTCATCTGTAAGCAGCCTACCCCTTTCTCTGTATTTCCTTAGTTCTGTAGAAAAGATTTCCATTTGTTCTCATTGTTTCATTGATTGCAGCATCGTCGTGAGAGCAAACCTCGGAGTCGGAGCAGATCTCGTTCCAAGTCCAGAAGCCTGTCACGATCCCTTTCGCCTGATGTAATATTCTGACTCAAGACATATATAGTTCTCAAAGTTTGTATTTATGAAGTAATAACTAATTTGAATTTTGATTTGAACAGGGGAGATCCAATAGAAGTCGAAGCCGAAGCCAAAGCCGATCTGTTGACTCCAGGGACCGATATTCACAATAGGACATTGTTCCTGTGATGGCTCGCTCTCGGATGGATGGATGGAATAGTAAAGCGTAGGAGAGAGATTAGCGTTGGGTATATTTGGATGGCTGGATTTAATGTGTTATGGGTGACTTGTATTAACCCAACCCATGTTTCAGTATATTTTAGAATGGCTACTTGTATCTTGAAAATGTGTTTCTTACCGAATTTAAAGTCAAATTTTAAATGATGTACTATTTTCAAAGTTCACTTTTCGCCAGACTTTTTTAAGGAAGAGATCTCAACTTTCCTCAAATAAATTGATTATCTTATATTAAATTA

mRNA sequence

TGACACTATAAAAATTTGGTTCTCGCTTTGCACTCTCGATTTTTCCAGAAGCTAAGAAATCTTCAAGAATCTGCTTCTCTATTTTCTCTCTAGCCCTAAAATCACCAGCCATGGTGATGATTGATGACTATGGTTATGGCTCAATAGATTTTATTTTTATTGTACACGAGAAAGGAGACGATGAGCAGCAGAAATAGTCGCACCATCTATGTTGGTAATCTTCCTGGAGATATTCGTTTGAGAGAAGTTGAAGATCTGTTCTACAAGTATGGACCCATTGTCGACATTGATTTGAAGATTCCCCCACGCCCACCGGGCTATGCTTTTGTGGAGTTTGAAGATGTTCGTGATGCTGAAGATGCAATTTATGGCCGAGATGGATATAAGTTTGATGGATGTCGTTTACGGGTGGAATTTGCGCATGGTGGAAGGGGACATTCTTCTTCAATAGATCGTTATAGTCGTAGTGGGAGTAGCCGTGGTGGTGTTTCTCGGCGAACTGACTATCGTGTTTTGGTCACTGGATTACCACCTTCTGCTTCATGGCAAGACCTGAAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAAGTTTTCCGTGATCGTGGTGGGATGGCAGGAATAGTAGATTATACAAACTATGATGACATGAAATATGCTATAAGAAAACTTGATGATTCTGAATTTCGAAATGCCTTTTCTCGTGCGTATGTACGGGTGAAGGAATATGACTCTAGGCGCAGTTATTCCAGAAGTCCTTCTCGTGATTCTAGACGAAGTTATCATTCTAAAAGTCCTAGTCGTAGTCCTTATAGGGAAAGAGGCCGGAGCCGAAGTAGAAGTAGAAGTCGAACTCGAAGCCTTAGTCATAGCCGTAGTCGTAGTCATAGTGGCAGGAGCACAAGTCTGTCCCCAAGGCTCAAGCACTCTCATCGGTCACCGTCAATTTCTGAACAATCCCGATCAAAGTCTCTTTCAAGGTCAGGGTCGAGATCCAGATCAAGATCCAGATCAGGATCTCCAATTTCATCTCATCGTCGTGAGAGCAAACCTCGGAGTCGGAGCAGATCTCGTTCCAAGTCCAGAAGCCTGTCACGATCCCTTTCGCCTGATGGGAGATCCAATAGAAGTCGAAGCCGAAGCCAAAGCCGATCTGTTGACTCCAGGGACCGATATTCACAATAGGACATTGTTCCTGTGATGGCTCGCTCTCGGATGGATGGATGGAATAGTAAAGCGTAGGAGAGAGATTAGCGTTGGGTATATTTGGATGGCTGGATTTAATGTGTTATGGGTGACTTGTATTAACCCAACCCATGTTTCAGTATATTTTAGAATGGCTACTTGTATCTTGAAAATGTGTTTCTTACCGAATTTAAAGTCAAATTTTAAATGATGTACTATTTTCAAAGTTCACTTTTCGCCAGACTTTTTTAAGGAAGAGATCTCAACTTTCCTCAAATAAATTGATTATCTTATATTAAATTA

Coding sequence (CDS)

ATGAGCAGCAGAAATAGTCGCACCATCTATGTTGGTAATCTTCCTGGAGATATTCGTTTGAGAGAAGTTGAAGATCTGTTCTACAAGTATGGACCCATTGTCGACATTGATTTGAAGATTCCCCCACGCCCACCGGGCTATGCTTTTGTGGAGTTTGAAGATGTTCGTGATGCTGAAGATGCAATTTATGGCCGAGATGGATATAAGTTTGATGGATGTCGTTTACGGGTGGAATTTGCGCATGGTGGAAGGGGACATTCTTCTTCAATAGATCGTTATAGTCGTAGTGGGAGTAGCCGTGGTGGTGTTTCTCGGCGAACTGACTATCGTGTTTTGGTCACTGGATTACCACCTTCTGCTTCATGGCAAGACCTGAAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAAGTTTTCCGTGATCGTGGTGGGATGGCAGGAATAGTAGATTATACAAACTATGATGACATGAAATATGCTATAAGAAAACTTGATGATTCTGAATTTCGAAATGCCTTTTCTCGTGCGTATGTACGGGTGAAGGAATATGACTCTAGGCGCAGTTATTCCAGAAGTCCTTCTCGTGATTCTAGACGAAGTTATCATTCTAAAAGTCCTAGTCGTAGTCCTTATAGGGAAAGAGGCCGGAGCCGAAGTAGAAGTAGAAGTCGAACTCGAAGCCTTAGTCATAGCCGTAGTCGTAGTCATAGTGGCAGGAGCACAAGTCTGTCCCCAAGGCTCAAGCACTCTCATCGGTCACCGTCAATTTCTGAACAATCCCGATCAAAGTCTCTTTCAAGGTCAGGGTCGAGATCCAGATCAAGATCCAGATCAGGATCTCCAATTTCATCTCATCGTCGTGAGAGCAAACCTCGGAGTCGGAGCAGATCTCGTTCCAAGTCCAGAAGCCTGTCACGATCCCTTTCGCCTGATGGGAGATCCAATAGAAGTCGAAGCCGAAGCCAAAGCCGATCTGTTGACTCCAGGGACCGATATTCACAATAG

Protein sequence

MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSRSRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ

Homology

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BLAST of Tan0000573 vs. ExPASy Swiss-Prot
Match: Q9XFR5 (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.1e-91
Identity = 199/285 (69.82%), Postives = 224/285 (78.60%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR +RTIYVGNLPGDIR  EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGY FDGCRLRVE AHGGR  S S+DRYS S S+    SRR+DYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RV+EY+S RS SRSP  D  +SY S+S      R RG S S S S++RS+S +R      
Sbjct: 181 RVREYES-RSVSRSP--DDSKSYRSRS------RSRGPSCSYS-SKSRSVSPAR------ 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPIS 286
              S+SPR +   RS S+     S S S+S S+SRSRSRS SP+S
Sbjct: 241 ---SISPRSRPLSRSRSLYS---SVSRSQSRSKSRSRSRSNSPVS 263

[Close]

BLAST of Tan0000573 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-83
Identity = 197/324 (60.80%), Postives = 226/324 (69.75%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRG-----------GVSRRTDY 120
           AI+GRDGY FDG RLRVE AHGGR  SS   R S +G  RG           G SRR+++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDS 180
           RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRS 240
           EFRNAFS  YVRV+EYDSR+                   SRSP R R  S+SRSRSR RS
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD------------------SRSPSRGRSYSKSRSRSRGRS 240

Query: 241 LSHSRSRSHSGRSTSLSPRLKHSHRSP--SISEQSRSKSLSRSGSRSRSRSRSGSPISSH 300
           +S SRSRS   RS S SP+ K S RSP  S S     +S SRS S  RSRSRS SP+ S 
Sbjct: 241 VSRSRSRS---RSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLPSV 300

Query: 301 RRESKPRSRSRSRSKSRSLSRSLS 312
           ++E        S +KS   +RS S
Sbjct: 301 QKEGSKSPSKPSPAKSPIHTRSPS 302

[Close]

BLAST of Tan0000573 vs. ExPASy Swiss-Prot
Match: A2RVS6 (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-82
Identity = 195/324 (60.19%), Postives = 223/324 (68.83%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MS R SR+IYVGNLPGDIR  E+ED+FYKYG IVDI+LK+PPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDR-------------YSRSGSSRGGVSRRT 120
           AI GRDGY  DGCRLRVE AHGGRG SSS  R                 GS+R GVSR +
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 121 DYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
           ++RV+V GLP SASWQDLKDHMR+AGDVCF+EV RD  G  G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRT 240
           D+EFRN ++R ++RVK+Y+S RS SRSPS                 R R RSRSRSRSR 
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPS-----------------RSRSRSRSRSRSRG 240

Query: 241 RSLSHSRSRSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSH 300
           R  SHSRSRS    S S SPR            +  SKS  RS SRS S+SRS SP    
Sbjct: 241 RGRSHSRSRS---LSRSKSPR------------KDLSKSPRRSLSRSISKSRSPSP---D 289

Query: 301 RRESKPRSRSRSRSKSRSLSRSLS 312
           +++S PR+ SRS+S+SRS SRS S
Sbjct: 301 KKKSPPRAMSRSKSRSRSRSRSPS 289

[Close]

BLAST of Tan0000573 vs. ExPASy Swiss-Prot
Match: F4JHI7 (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.8e-81
Identity = 193/296 (65.20%), Postives = 211/296 (71.28%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRTIYVGNLPGDIR REVEDLF KYGP+V IDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRG------------GVSRRTD 120
           AIYGRDGY FDG  LRVE AHGGR  SS   R S SG  RG            G SRR++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 120

Query: 121 YRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDD 180
           YRV+V+GLP SASWQDLKDHMR+ G+VCFS+VFRD  G  GIVDYT+Y+DMKYA   LDD
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDD 180

Query: 181 SEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTR 240
           +EFRNAFS  YVRV+EYDSRR  SRSPS                   RGRS S+SRSR R
Sbjct: 181 TEFRNAFSHEYVRVREYDSRRD-SRSPS-------------------RGRSYSKSRSRGR 240

Query: 241 SLSHSRSRSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRS-GSRSRSRSRSGSP 284
           S S SRSRS S RS S SP+ K   RSP       +KS SRS  SRSRS+SRS SP
Sbjct: 241 SPSRSRSRSRS-RSKSRSPKAKSLRRSP-------AKSTSRSPRSRSRSKSRSLSP 264

[Close]

BLAST of Tan0000573 vs. ExPASy Swiss-Prot
Match: Q6NYA0 (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.5e-56
Identity = 137/263 (52.09%), Postives = 165/263 (62.74%), Query Frame = 0


Query: 2   SSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDA 61
           +  N   IYVGNLP DIR ++VED+FYKYG I DIDLK     P +AFVEFED RDAEDA
Sbjct: 10  AGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDA 69

Query: 62  IYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGV----------SRRTDYRV 121
           +YGRDGY +DG RLRVEF   GRG         R G   GGV          SRR++YRV
Sbjct: 70  VYGRDGYDYDGYRLRVEFPRSGRGG-------GRGGGGGGGVGAPRGRYGPPSRRSEYRV 129

Query: 122 LVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEF 181
           +V+GLPPS SWQDLKDHMR AGDVC+++VFRD     G+V++   +DM YA+RKLD+++F
Sbjct: 130 IVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKF 189

Query: 182 R-NAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSL 241
           R +    AY+RVK         RSPS                    GRSRSRSRSR+RS 
Sbjct: 190 RSHEGETAYIRVKV-----DGPRSPS-------------------YGRSRSRSRSRSRSR 238

Query: 242 SHSRSRSHSGRSTSLSPRLKHSH 254
           S+SRSRS+S R +  SPR    H
Sbjct: 250 SNSRSRSYSPRRSRGSPRYSPRH 238

[Close]

BLAST of Tan0000573 vs. NCBI nr
Match: KAG6588492.1 (Serine/arginine-rich splicing factor SR30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-151
Identity = 309/340 (90.88%), Postives = 321/340 (94.41%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED+RDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSR----TRSLSHSRSR 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPSRSPY ERGRSRSRSRSR    +RSL  S S 
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLRRSHSH 240

Query: 241 SHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSR 300
           SHSGRSTSLSPRLKHS RSPSISEQS+SKSL    SRSRSRSRSGSP+SS RRE K ++R
Sbjct: 241 SHSGRSTSLSPRLKHSRRSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RRERKIQNR 300

Query: 301 SRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           SRSRSKSRSLSRSLSPDGRS+RSRSRS+S+SVDSRDRYS+
Sbjct: 301 SRSRSKSRSLSRSLSPDGRSDRSRSRSRSQSVDSRDRYSE 335

[Close]

BLAST of Tan0000573 vs. NCBI nr
Match: XP_022928780.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_022928787.1 serine/arginine-rich splicing factor SR30-like [Cucurbita moschata])

HSP 1 Score: 544.3 bits (1401), Expect = 7.5e-151
Identity = 308/340 (90.59%), Postives = 321/340 (94.41%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED+RDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERG----RSRSRSRSRTRSLSHSRSR 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPSRSP+ ERG    RSRSRSRS++RSL  S S 
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPHGERGRSQSRSRSRSRSQSRSLRRSHSH 240

Query: 241 SHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSR 300
           SHSGRSTSLSPRLKHS RSPSISEQS+SKSL    SRSRSRSRSGSP+SS RRE K ++R
Sbjct: 241 SHSGRSTSLSPRLKHSRRSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RRERKFQNR 300

Query: 301 SRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           SRSRSKSRSLSRSLSPDGRS+RSRSRS+SRSVDSRDRYS+
Sbjct: 301 SRSRSKSRSLSRSLSPDGRSDRSRSRSRSRSVDSRDRYSE 335

[Close]

BLAST of Tan0000573 vs. NCBI nr
Match: XP_022969758.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766.1 serine/arginine-rich splicing factor SR30-like [Cucurbita maxima])

HSP 1 Score: 537.0 bits (1382), Expect = 1.2e-148
Identity = 308/344 (89.53%), Postives = 319/344 (92.73%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERG--------RSRSRSRSRTRSLSH 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPS SPY ERG        RSRSRSRS++RSL  
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSRSPSCSPYGERGRSQSRSRSRSRSRSRSQSRSLRR 240

Query: 241 SRSRSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESK 300
           SRS SHSGRSTSLSPRLKHS +SPSISEQS+SKSL    SRSRSRSRSGSP+SS RRE K
Sbjct: 241 SRSHSHSGRSTSLSPRLKHSRQSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RRERK 300

Query: 301 PRSRSRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
            ++RSRSRSKSRSLSRSLSPDGRS+RSRSRSQ  SVDSRDRYS+
Sbjct: 301 IQNRSRSRSKSRSLSRSLSPDGRSDRSRSRSQ--SVDSRDRYSE 337

[Close]

BLAST of Tan0000573 vs. NCBI nr
Match: XP_023530260.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_023530261.1 serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.2 bits (1367), Expect = 6.6e-147
Identity = 306/341 (89.74%), Postives = 317/341 (92.96%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGR-GHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
           AIYGRDGYKFDGCRLRVEFAHGGR GHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120

Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
           ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180

Query: 181 VRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSR----TRSLSHSRS 240
           VRVKEYDSRRSYSRSPSRDSR+S +S+SPSRSPY ERGRSRSRSRSR    +RSL  S S
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240

Query: 241 RSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRS 300
            SHSGRSTS SPRLKHS RSPSISEQS+SKSL    SRSRSRSRSGSP+SS R E K ++
Sbjct: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RHERKIQN 300

Query: 301 RSRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           RSRSRSKSRSLSRSLSP+GRS+RSRSRSQ  SVDSRDRYS+
Sbjct: 301 RSRSRSKSRSLSRSLSPEGRSDRSRSRSQ--SVDSRDRYSE 334

[Close]

BLAST of Tan0000573 vs. NCBI nr
Match: XP_038879705.1 (serine/arginine-rich splicing factor SR30-like [Benincasa hispida] >XP_038879706.1 serine/arginine-rich splicing factor SR30-like [Benincasa hispida])

HSP 1 Score: 527.7 bits (1358), Expect = 7.3e-146
Identity = 301/338 (89.05%), Postives = 312/338 (92.31%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSS+DRYSRSGSSRGGVSRRTDYRVLVTGLP SA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVSRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSL--SHSRSRSH 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPSRSPYRERG +RSR R R+RSL  S S SRSH
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSEYSRSPSRSPYRERGWNRSRGRIRSRSLIRSRSHSRSH 240

Query: 241 SGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSRSR 300
           SGRSTSLSPR KHS RS SISEQ    SLSRS SRS SRSRS SP+SS  RESKPRSRSR
Sbjct: 241 SGRSTSLSPRHKHSRRSRSISEQ----SLSRSRSRSWSRSRSRSPVSSRHRESKPRSRSR 300

Query: 301 SRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           SRSKSRS+SRSLSP+ RS+RSR    SRSVDSRD+YS+
Sbjct: 301 SRSKSRSMSRSLSPNVRSDRSR----SRSVDSRDKYSE 330

[Close]

BLAST of Tan0000573 vs. ExPASy TrEMBL
Match: A0A6J1ESI8 (serine/arginine-rich splicing factor SR30-like OS=Cucurbita moschata OX=3662 GN=LOC111435599 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.6e-151
Identity = 308/340 (90.59%), Postives = 321/340 (94.41%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED+RDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERG----RSRSRSRSRTRSLSHSRSR 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPSRSP+ ERG    RSRSRSRS++RSL  S S 
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPHGERGRSQSRSRSRSRSQSRSLRRSHSH 240

Query: 241 SHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSR 300
           SHSGRSTSLSPRLKHS RSPSISEQS+SKSL    SRSRSRSRSGSP+SS RRE K ++R
Sbjct: 241 SHSGRSTSLSPRLKHSRRSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RRERKFQNR 300

Query: 301 SRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           SRSRSKSRSLSRSLSPDGRS+RSRSRS+SRSVDSRDRYS+
Sbjct: 301 SRSRSKSRSLSRSLSPDGRSDRSRSRSRSRSVDSRDRYSE 335

[Close]

BLAST of Tan0000573 vs. ExPASy TrEMBL
Match: A0A6J1HYQ5 (serine/arginine-rich splicing factor SR30-like OS=Cucurbita maxima OX=3661 GN=LOC111468858 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.8e-149
Identity = 308/344 (89.53%), Postives = 319/344 (92.73%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSID YSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERG--------RSRSRSRSRTRSLSH 240
           RVKEYDSRRSYSRSPSRDSRRS +S+SPS SPY ERG        RSRSRSRS++RSL  
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSRSPSCSPYGERGRSQSRSRSRSRSRSRSQSRSLRR 240

Query: 241 SRSRSHSGRSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESK 300
           SRS SHSGRSTSLSPRLKHS +SPSISEQS+SKSL    SRSRSRSRSGSP+SS RRE K
Sbjct: 241 SRSHSHSGRSTSLSPRLKHSRQSPSISEQSQSKSL----SRSRSRSRSGSPVSS-RRERK 300

Query: 301 PRSRSRSRSKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
            ++RSRSRSKSRSLSRSLSPDGRS+RSRSRSQ  SVDSRDRYS+
Sbjct: 301 IQNRSRSRSKSRSLSRSLSPDGRSDRSRSRSQ--SVDSRDRYSE 337

[Close]

BLAST of Tan0000573 vs. ExPASy TrEMBL
Match: A0A6J1C3Z4 (serine/arginine-rich splicing factor SR30 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007710 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.3e-145
Identity = 300/336 (89.29%), Postives = 309/336 (91.96%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRL+EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLKEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRG SSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGQSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSR+YV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRSYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RVKEYDSRRSYSRSPS DSRRS +S+SPSRSPYRERGRSRSRSRS       SRS SHSG
Sbjct: 181 RVKEYDSRRSYSRSPSHDSRRSDYSRSPSRSPYRERGRSRSRSRSL------SRSHSHSG 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSRSRSR 300
           RSTSLSPRL HS RS SISEQSRSKSL    SRSRSRSRS SPISS  RESKPRSRSRSR
Sbjct: 241 RSTSLSPRLNHSRRSRSISEQSRSKSL----SRSRSRSRSRSPISSRHRESKPRSRSRSR 300

Query: 301 SKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           S SRSLSRSLSP+ RS++SRSR    SV+SRDRYS+
Sbjct: 301 SNSRSLSRSLSPNARSDQSRSR--GLSVESRDRYSE 324

[Close]

BLAST of Tan0000573 vs. ExPASy TrEMBL
Match: A0A6J1C1X9 (serine/arginine-rich splicing factor SR30 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007710 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.3e-144
Identity = 300/340 (88.24%), Postives = 309/340 (90.88%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRL+EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLKEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRG SSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGQSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSR+YV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRSYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RVKEYDSRRSYSRSPS DSRRS +S+SPSRSPYRERGRSRSRSRS       SRS SHSG
Sbjct: 181 RVKEYDSRRSYSRSPSHDSRRSDYSRSPSRSPYRERGRSRSRSRSL------SRSHSHSG 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSRSRSR 300
           RSTSLSPRL HS RS SISEQSRSKSL    SRSRSRSRS SPISS  RESKPRSRSRSR
Sbjct: 241 RSTSLSPRLNHSRRSRSISEQSRSKSL----SRSRSRSRSRSPISSRHRESKPRSRSRSR 300

Query: 301 SKSRSLSRSLSPD----GRSNRSRSRSQSRSVDSRDRYSQ 337
           S SRSLSRSLSP+     RS++SRSR    SV+SRDRYS+
Sbjct: 301 SNSRSLSRSLSPNVVILARSDQSRSR--GLSVESRDRYSE 328

[Close]

BLAST of Tan0000573 vs. ExPASy TrEMBL
Match: A0A1S3BPM4 (serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC103492152 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.4e-140
Identity = 293/336 (87.20%), Postives = 304/336 (90.48%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSS+DRYSRSGSSRGGV RRTDYRVLVTGLP SA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RVKEYDSR SYSRSPS DSRRS +S+SPS SPYR RGRS+SRSRSR      SRSRS+SG
Sbjct: 181 RVKEYDSRHSYSRSPSLDSRRSDYSRSPSGSPYRGRGRSQSRSRSR------SRSRSYSG 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPISSHRRESKPRSRSRSR 300
           RSTSLSPR KHS RS SISEQ    SLSRS SRSRSRSRS SP+SS  R S+PRSRSRSR
Sbjct: 241 RSTSLSPRHKHSRRSRSISEQ----SLSRSRSRSRSRSRSRSPVSSRHRASRPRSRSRSR 300

Query: 301 SKSRSLSRSLSPDGRSNRSRSRSQSRSVDSRDRYSQ 337
           SK    SRSLSP+ RS+RSRSRSQ  SVDSRD+YS+
Sbjct: 301 SK----SRSLSPNVRSDRSRSRSQ--SVDSRDQYSE 320

[Close]

BLAST of Tan0000573 vs. TAIR 10
Match: AT1G09140.1 (SERINE-ARGININE PROTEIN 30 )

HSP 1 Score: 336.3 bits (861), Expect = 2.9e-92
Identity = 199/285 (69.82%), Postives = 224/285 (78.60%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR +RTIYVGNLPGDIR  EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGY FDGCRLRVE AHGGR  S S+DRYS S S+    SRR+DYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RV+EY+S RS SRSP  D  +SY S+S      R RG S S S S++RS+S +R      
Sbjct: 181 RVREYES-RSVSRSP--DDSKSYRSRS------RSRGPSCSYS-SKSRSVSPAR------ 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSGSPIS 286
              S+SPR +   RS S+     S S S+S S+SRSRSRS SP+S
Sbjct: 241 ---SISPRSRPLSRSRSLYS---SVSRSQSRSKSRSRSRSNSPVS 263

[Close]

BLAST of Tan0000573 vs. TAIR 10
Match: AT1G09140.2 (SERINE-ARGININE PROTEIN 30 )

HSP 1 Score: 328.6 bits (841), Expect = 6.0e-90
Identity = 191/281 (67.97%), Postives = 212/281 (75.44%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR +RTIYVGNLPGDIR  EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120
           AIYGRDGY FDGCRLRVE AHGGR  S S+DRYS S S+    SRR+DYRVLVTGLPPSA
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180

Query: 181 RVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRSLSHSRSRSHSG 240
           RV+EY+S RS SRSP  D  +SY S+S SR P                      S S+S 
Sbjct: 181 RVREYES-RSVSRSP--DDSKSYRSRSRSRGP----------------------SCSYSS 240

Query: 241 RSTSLSPRLKHSHRSPSISEQSRSKSLSRSGSRSRSRSRSG 282
           +S S+SP    S RS  +   SRS+SL  S SRS S  R+G
Sbjct: 241 KSRSVSPARSISPRSRPL---SRSRSLYSSVSRSGSLLRAG 253

[Close]

BLAST of Tan0000573 vs. TAIR 10
Match: AT1G02840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 312.4 bits (799), Expect = 4.5e-85
Identity = 181/268 (67.54%), Postives = 204/268 (76.12%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRG-----------GVSRRTDY 120
           AI+GRDGY FDG RLRVE AHGGR  SS   R S +G  RG           G SRR+++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDS 180
           RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRS 240
           EFRNAFS  YVRV+EYDSR+  SRSPSR   RSY SKS SRS  R   RSRSRSRSR+RS
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRG--RSY-SKSRSRSRGRSVSRSRSRSRSRSRS 240

Query: 241 LSHSRSRSHSGRSTSLSPRLKHSHRSPS 258
                SR    +STS SP  +   RSPS
Sbjct: 241 PKAKSSRRSPAKSTSRSPGPRSKSRSPS 263

[Close]

BLAST of Tan0000573 vs. TAIR 10
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-84
Identity = 197/324 (60.80%), Postives = 226/324 (69.75%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRG-----------GVSRRTDY 120
           AI+GRDGY FDG RLRVE AHGGR  SS   R S +G  RG           G SRR+++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDS 180
           RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRS 240
           EFRNAFS  YVRV+EYDSR+                   SRSP R R  S+SRSRSR RS
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD------------------SRSPSRGRSYSKSRSRSRGRS 240

Query: 241 LSHSRSRSHSGRSTSLSPRLKHSHRSP--SISEQSRSKSLSRSGSRSRSRSRSGSPISSH 300
           +S SRSRS   RS S SP+ K S RSP  S S     +S SRS S  RSRSRS SP+ S 
Sbjct: 241 VSRSRSRS---RSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLPSV 300

Query: 301 RRESKPRSRSRSRSKSRSLSRSLS 312
           ++E        S +KS   +RS S
Sbjct: 301 QKEGSKSPSKPSPAKSPIHTRSPS 302

[Close]

BLAST of Tan0000573 vs. TAIR 10
Match: AT1G02840.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-84
Identity = 197/324 (60.80%), Postives = 226/324 (69.75%), Query Frame = 0


Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDRYSRSGSSRG-----------GVSRRTDY 120
           AI+GRDGY FDG RLRVE AHGGR  SS   R S +G  RG           G SRR+++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDS 180
           RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSYHSKSPSRSPYRERGRSRSRSRSRTRS 240
           EFRNAFS  YVRV+EYDSR+                   SRSP R R  S+SRSRSR RS
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD------------------SRSPSRGRSYSKSRSRSRGRS 240

Query: 241 LSHSRSRSHSGRSTSLSPRLKHSHRSP--SISEQSRSKSLSRSGSRSRSRSRSGSPISSH 300
           +S SRSRS   RS S SP+ K S RSP  S S     +S SRS S  RSRSRS SP+ S 
Sbjct: 241 VSRSRSRS---RSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLPSV 300

Query: 301 RRESKPRSRSRSRSKSRSLSRSLS 312
           ++E        S +KS   +RS S
Sbjct: 301 QKEGSKSPSKPSPAKSPIHTRSPS 302

The following BLAST results are available for this feature:

BLAST of Tan0000573 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XFR5	4.1e-91	69.82	Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
O22315	1.4e-83	60.80	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
A2RVS6	4.5e-82	60.19	Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
F4JHI7	3.8e-81	65.20	Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q6NYA0	9.5e-56	52.09	Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV...	[more]

BLAST of Tan0000573 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588492.1	1.5e-151	90.88	Serine/arginine-rich splicing factor SR30, partial [Cucurbita argyrosperma subsp...	[more]
XP_022928780.1	7.5e-151	90.59	serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_02292878...	[more]
XP_022969758.1	1.2e-148	89.53	serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766....	[more]
XP_023530260.1	6.6e-147	89.74	serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_038879705.1	7.3e-146	89.05	serine/arginine-rich splicing factor SR30-like [Benincasa hispida] >XP_038879706...	[more]

BLAST of Tan0000573 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESI8	3.6e-151	90.59	serine/arginine-rich splicing factor SR30-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HYQ5	5.8e-149	89.53	serine/arginine-rich splicing factor SR30-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1C3Z4	1.3e-145	89.29	serine/arginine-rich splicing factor SR30 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1C1X9	7.3e-144	88.24	serine/arginine-rich splicing factor SR30 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A1S3BPM4	6.4e-140	87.20	serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC10349215...	[more]

BLAST of Tan0000573 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09140.1	2.9e-92	69.82	SERINE-ARGININE PROTEIN 30	[more]
AT1G09140.2	6.0e-90	67.97	SERINE-ARGININE PROTEIN 30	[more]
AT1G02840.2	4.5e-85	67.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.1	1.0e-84	60.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.3	1.0e-84	60.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 110..181 e-value: 1.3E-6 score: 37.9 coord: 8..78 e-value: 7.5E-22 score: 88.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 111..173 e-value: 6.0E-10 score: 38.8 coord: 9..76 e-value: 4.1E-18 score: 65.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..82 score: 17.506401
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 109..187 score: 9.746194
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..109 e-value: 9.5E-26 score: 92.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 110..186 e-value: 5.1E-22 score: 79.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..218
None	No IPR available	PANTHER	PTHR23147:SF198	PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEIN	coord: 2..260
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..260
None	No IPR available	CDD	cd12599	RRM1_SF2_plant_like	coord: 8..78 e-value: 1.33384E-45 score: 146.451
None	No IPR available	CDD	cd12602	RRM2_SF2_plant_like	coord: 109..184 e-value: 9.28958E-46 score: 146.883
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000573.1	Tan0000573.1	mRNA
Tan0000573.2	Tan0000573.2	mRNA
Tan0000573.3	Tan0000573.3	mRNA
Tan0000573.4	Tan0000573.4	mRNA
Tan0000573.5	Tan0000573.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding