Tan0000552 (gene) Snake gourd v1

Overview


Name	Tan0000552
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	agamous-like MADS-box protein AGL29
Location	LG05: 77319821 .. 77320357 (-)
RNA-Seq Expression	Tan0000552
Synteny	Tan0000552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCGAAAAATCGAGATGAAGATGGTGAAGGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCAAACGATCTCGCTACTCTGTGCGGTTTAGAGGTCGCCATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCGTTCGGCAATCCGAATGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAATCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATTAAACAATTGCAATTGGAGAAGAAGAAGGGAGAAATGCTGGAGAAGGAGATGAAATCGAGAGGCGAATCGATCAAAATTGAGGATCTCGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAAACTGCGAGACAATGTGAAAAATAAAGAGAATGAATTGGAGGCTTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTAGGTGCTGATGAGTCTGATACAAAAAAAAGAGTTTGA

mRNA sequence

ATGGGAAGGCGAAAAATCGAGATGAAGATGGTGAAGGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCAAACGATCTCGCTACTCTGTGCGGTTTAGAGGTCGCCATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCGTTCGGCAATCCGAATGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAATCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATTAAACAATTGCAATTGGAGAAGAAGAAGGGAGAAATGCTGGAGAAGGAGATGAAATCGAGAGGCGAATCGATCAAAATTGAGGATCTCGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAAACTGCGAGACAATGTGAAAAATAAAGAGAATGAATTGGAGGCTTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTAGGTGCTGATGAGTCTGATACAAAAAAAAGAGTTTGA

Coding sequence (CDS)

ATGGGAAGGCGAAAAATCGAGATGAAGATGGTGAAGGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCAAACGATCTCGCTACTCTGTGCGGTTTAGAGGTCGCCATTGTCGTCTTCTCTCCCGGCGGTAAGGCGTTCTCGTTCGGCAATCCGAATGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAATCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATTAAACAATTGCAATTGGAGAAGAAGAAGGGAGAAATGCTGGAGAAGGAGATGAAATCGAGAGGCGAATCGATCAAAATTGAGGATCTCGATTTGGATGAGCTTTTGAAATTGAAGGAATCGTTGGAAAAACTGCGAGACAATGTGAAAAATAAAGAGAATGAATTGGAGGCTTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTAGGTGCTGATGAGTCTGATACAAAAAAAAGAGTTTGA

Protein sequence

MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNPNVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV

Homology

[Close]

BLAST of Tan0000552 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-29
Identity = 79/172 (45.93%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+MV+D  +RQVTFSKRR GLFKKA++LATLC  E+ IVVFSPGGK FS+G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 61  NVEDVVDRYLNRESESIPPARE-SGMFE---KENEELVDLIKQ-LQLEKKKGEMLEKEMK 120
           N++ V +R++    +S     E SG +    K   E +DL+ Q ++ EK++GE  +++++
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 121 SRGE---SIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANE 165
           S G+      IE L LDEL + K+ L+ +   ++ + N L+ASS L+LL+ +
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Tan0000552 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNPN 61
           GR+KIEM  +K+  + QVTFSKRR+GLFKKA++L TLCG EVAIVVFSPG K FSFG+PN
Sbjct: 7   GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66

Query: 62  VEDVVDRYLNRESESIPPARESGMFEKE----------NEELVDLIKQLQLEKKKGEMLE 121
           V+ V+DR++N  +  +PP + + M  +E          N  L  ++ QL+ EKKK + L+
Sbjct: 67  VDSVIDRFIN--NNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELK 126

Query: 122 K---EMKSRGE--SIKIEDLDLDELLKLKESLEKLR 143
           K   + K+ G      +E+L L +L   K +LE L+
Sbjct: 127 KIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of Tan0000552 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 65/159 (40.88%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           +GR+KI M  +K    RQVTFSKRR GLFKKA++L TLCG E+ I+VFSP  K FSFG+P
Sbjct: 62  IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHP 121

Query: 61  NVEDVVDRYLNRESESIPPARE----SGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKS 120
           +VE V+DRY++R + S+  +++         + N +L  ++ +++ EKKKG+ +E   + 
Sbjct: 122 SVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAME---EM 181

Query: 121 RGESIK----------IEDLDLDELLKLKESLEKLRDNV 146
           R ES++          +E++++ +L ++K +LE+LR  V
Sbjct: 182 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Tan0000552 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.8e-17
Identity = 57/161 (35.40%), Postives = 94/161 (58.39%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           +GRRKIE+  + +  + QVTFSKRR+GLFKK ++L TLC  E+AI+VFSP GKA+SFG+P
Sbjct: 6   LGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHP 65

Query: 61  NVEDVVDRYLNR----ESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKS 120
           NV  ++D  L R     + +   +R     +  NE L +++ + + E++  + + +  + 
Sbjct: 66  NVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNERE 125

Query: 121 RGESIK-----IEDLDLDELLKLKESLEKLRDNVKNKENEL 153
             ++ K       +L+L +   +K  LE L+  V  K  +L
Sbjct: 126 NKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Tan0000552 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.7e-16
Identity = 60/179 (33.52%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           M R K +MK +++  SRQVTFSKRRNGL KKA +L+ LC  EV++++FSP GK + F + 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  NVEDVVDRYL--NRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRG 120
           N++D +DRYL   ++  S  P  E  M   + E    + K  QLE  K ++L       G
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLL-------G 120

Query: 121 ESIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKR 178
           E   I    ++EL ++++ LEK    ++ ++ ++       L   E  + A+     ++
Sbjct: 121 EG--IGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170

[Close]

BLAST of Tan0000552 vs. NCBI nr
Match: KAG6583909.1 (Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDVVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEDVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE+LR NV+ KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLERLRQNVRMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. NCBI nr
Match: XP_022927257.1 (agamous-like MADS-box protein AGL29 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-75
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDVVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEDVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE+LR NV  KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. NCBI nr
Match: XP_023519112.1 (agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.6e-75
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDVVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEDVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE LR NV+ KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLESLRQNVRMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. NCBI nr
Match: XP_023001476.1 (agamous-like MADS-box protein AGL29 [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 7.9e-75
Identity = 157/178 (88.20%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVE+VVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEEVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE+LR NV+ KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. NCBI nr
Match: KAG7019526.1 (Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.1 bits (736), Expect = 5.1e-74
Identity = 155/178 (87.08%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDVVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEDVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDL+ELLKL+ESLE+LR NV+ KE+ELEASSSLLLLANEPV+ AD S +K  +
Sbjct: 121 IKIEDLDLNELLKLRESLERLRKNVRMKESELEASSSLLLLANEPVMEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. ExPASy TrEMBL
Match: A0A6J1EGN3 (agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC111434156 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.7e-75
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDVVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEDVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE+LR NV  KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. ExPASy TrEMBL
Match: A0A6J1KIQ5 (agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.8e-75
Identity = 157/178 (88.20%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLE+AI+VFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVE+VVDRYLNR+SE IPPA E GMFEKENEEL+DL+KQLQLEKKKGEMLEKEMKSRGES
Sbjct: 61  NVEEVVDRYLNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTKKRV 179
           IKIEDLDLDELLKLKESLE+LR NV+ KE+ELEASSSLLLLANEPVV AD S +K  +
Sbjct: 121 IKIEDLDLDELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASASKTSI 177

[Close]

BLAST of Tan0000552 vs. ExPASy TrEMBL
Match: A0A6J1CEW1 (agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC111010863 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 152/175 (86.86%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDR SRQVTFSKRRNGLFKKANDLATLCGLE+AIVVFSPGGKAFSFG+P
Sbjct: 1   MGRRKIEMKMVKDRSSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGHP 60

Query: 61  NVEDVVDRYLNRESESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRGES 120
           NVEDV+DRYLN ESE IPPARE+GM EKENEEL+DLIKQLQLEK++GE+LEKEMKS+ ES
Sbjct: 61  NVEDVIDRYLNHESEPIPPAREAGMIEKENEELLDLIKQLQLEKRRGEILEKEMKSKEES 120

Query: 121 IKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGADESDTK 176
           IKIEDL+ DELLKLKESLEKLR+NVK K +ELEASSSLLLLANEPV+ AD SDTK
Sbjct: 121 IKIEDLNFDELLKLKESLEKLRENVKIKASELEASSSLLLLANEPVMEADRSDTK 175

[Close]

BLAST of Tan0000552 vs. ExPASy TrEMBL
Match: A0A5A7UFJ7 (Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00320 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 139/172 (80.81%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKA DLATLCGLE+AIVVFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRE--SESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRG 120
           NVE+VVDRYL+ E         RE GM EKENEEL+DL+KQLQ+EKKKGE++EKEMKSRG
Sbjct: 61  NVEEVVDRYLSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRG 120

Query: 121 ESIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGAD 171
           E +KIEDLDL+ELLKLKESLEKLR NVK +E+ELEAS SLLLLANE  V  D
Sbjct: 121 ELMKIEDLDLNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Tan0000552 vs. ExPASy TrEMBL
Match: A0A1S3B9N7 (agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487550 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 139/172 (80.81%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKA DLATLCGLE+AIVVFSPGGKAFSFGNP
Sbjct: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNP 60

Query: 61  NVEDVVDRYLNRE--SESIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKSRG 120
           NVE+VVDRYL+ E         RE GM EKENEEL+DL+KQLQ+EKKKGE++EKEMKSRG
Sbjct: 61  NVEEVVDRYLSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRG 120

Query: 121 ESIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANEPVVGAD 171
           E +KIEDLDL+ELLKLKESLEKLR NVK +E+ELEAS SLLLLANE  V  D
Sbjct: 121 ELMKIEDLDLNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Tan0000552 vs. TAIR 10
Match: AT2G34440.1 (AGAMOUS-like 29 )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 79/172 (45.93%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+MV+D  +RQVTFSKRR GLFKKA++LATLC  E+ IVVFSPGGK FS+G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 61  NVEDVVDRYLNRESESIPPARE-SGMFE---KENEELVDLIKQ-LQLEKKKGEMLEKEMK 120
           N++ V +R++    +S     E SG +    K   E +DL+ Q ++ EK++GE  +++++
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 121 SRGE---SIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANE 165
           S G+      IE L LDEL + K+ L+ +   ++ + N L+ASS L+LL+ +
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Tan0000552 vs. TAIR 10
Match: AT3G66656.1 (AGAMOUS-like 91 )

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-26
Identity = 72/177 (40.68%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           MGRRKI+M+ V+D  ++QVTFSKRR GLFKKA++LATLC  EV IVVFSPG K +SFG P
Sbjct: 1   MGRRKIKMEKVQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKP 60

Query: 61  NVEDVVDRYLNR-ESESIPPARESGMFEKEN---------EELVDLIKQLQLEKKKGEML 120
           N + + +R+ N  E E    + E+  + + N         + L  + ++ + EKK GE L
Sbjct: 61  NFDVIAERFKNEFEEEEEGDSCETSGYSRGNRARQEKKICKRLNSITEEAEAEKKHGEDL 120

Query: 121 EKEMKSRGE---SIKIEDLDLDELLKLKESLEKLRDNVKNKENELEASSSLLLLANE 165
            K ++S  +   +  IE+L L+EL + +  ++K+   +++  + ++ASSSL+ L+N+
Sbjct: 121 HKWLESAEQDKFNKPIEELTLEELKEFEAKIKKISCGIQSNISHMQASSSLMFLSND 177

[Close]

BLAST of Tan0000552 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNPN 61
           GR+KIEM  +K+  + QVTFSKRR+GLFKKA++L TLCG EVAIVVFSPG K FSFG+PN
Sbjct: 7   GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66

Query: 62  VEDVVDRYLNRESESIPPARESGMFEKE----------NEELVDLIKQLQLEKKKGEMLE 121
           V+ V+DR++N  +  +PP + + M  +E          N  L  ++ QL+ EKKK + L+
Sbjct: 67  VDSVIDRFIN--NNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELK 126

Query: 122 K---EMKSRGE--SIKIEDLDLDELLKLKESLEKLR 143
           K   + K+ G      +E+L L +L   K +LE L+
Sbjct: 127 KIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of Tan0000552 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 65/159 (40.88%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 1   MGRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNP 60
           +GR+KI M  +K    RQVTFSKRR GLFKKA++L TLCG E+ I+VFSP  K FSFG+P
Sbjct: 62  IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHP 121

Query: 61  NVEDVVDRYLNRESESIPPARE----SGMFEKENEELVDLIKQLQLEKKKGEMLEKEMKS 120
           +VE V+DRY++R + S+  +++         + N +L  ++ +++ EKKKG+ +E   + 
Sbjct: 122 SVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAME---EM 181

Query: 121 RGESIK----------IEDLDLDELLKLKESLEKLRDNV 146
           R ES++          +E++++ +L ++K +LE+LR  V
Sbjct: 182 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Tan0000552 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18
Identity = 57/157 (36.31%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 2   GRRKIEMKMVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEVAIVVFSPGGKAFSFGNPN 61
           GR+KIEMK +++  + QVTFSKRR GLFKKA++L TL G E+ ++VFSPGGK FSFG+P+
Sbjct: 7   GRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPS 66

Query: 62  VEDVVDRYLNRESES-----------IPPARESGMFEKENEELVDLIKQLQLEKKKGEML 121
           V++++ R+ N    S           +   R     +  N  L +++   + EK+K  +L
Sbjct: 67  VQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQKRMVL 126

Query: 122 EKEMKSRGE-----SIKIEDLDLDELLKLKESLEKLR 143
           +   +SR +        ++DLD++E  +L  +L+ ++
Sbjct: 127 DLLKESREQVGNWYEKDVKDLDMNETNQLISALQDVK 163

The following BLAST results are available for this feature:

BLAST of Tan0000552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64703	3.1e-29	45.93	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
Q9FKK2	3.0e-24	46.15	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	7.3e-23	40.88	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	7.8e-17	35.40	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64645	8.7e-16	33.52	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]

BLAST of Tan0000552 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583909.1	2.1e-75	88.76	Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022927257.1	3.6e-75	88.76	agamous-like MADS-box protein AGL29 [Cucurbita moschata]	[more]
XP_023519112.1	3.6e-75	88.76	agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo]	[more]
XP_023001476.1	7.9e-75	88.20	agamous-like MADS-box protein AGL29 [Cucurbita maxima]	[more]
KAG7019526.1	5.1e-74	87.08	Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Tan0000552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGN3	1.7e-75	88.76	agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC11143415...	[more]
A0A6J1KIQ5	3.8e-75	88.20	agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 ...	[more]
A0A6J1CEW1	2.1e-73	86.86	agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]
A0A5A7UFJ7	1.3e-62	80.81	Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B9N7	1.3e-62	80.81	agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Tan0000552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34440.1	2.2e-30	45.93	AGAMOUS-like 29	[more]
AT3G66656.1	7.3e-26	40.68	AGAMOUS-like 91	[more]
AT5G60440.1	2.1e-25	46.15	AGAMOUS-like 62	[more]
AT2G24840.1	5.2e-24	40.88	AGAMOUS-like 61	[more]
AT4G36590.1	2.5e-18	36.31	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	COILS	Coil	Coil	coord: 128..158
None	No IPR available	PANTHER	PTHR11945:SF229	AGAMOUS-LIKE MADS-BOX PROTEIN AGL29	coord: 2..171
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..171
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 64.15 coord: 3..23 score: 48.83 coord: 38..59 score: 41.53
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 3.5E-32 score: 122.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 12..57 e-value: 3.4E-23 score: 80.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 26.338114
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..78 e-value: 9.7E-27 score: 94.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..73
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 6.33468E-32 score: 108.023

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000552.1	Tan0000552.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding