Tan0000543 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGATGTTATTTGGCTCTTCCCTTTCAAGGGCTACTTCTCCTACAAACATATTCATCCTTGCCGGTCAGAGCAACATGGCTGGTCGAGGTGGGTTGATGAAAATCAAACGGGACAACTTATGTGGGATGGGTATGTGCCACCAGAGTGTCAACCCGACCCATCCATTGTACGATTGAACCCTGAGCGCCAATGGGAGCTAGCACGAGAGCCTCTCCACGAGGGAATTGATATCGGCAAGGCCACTGGGGTTGGTCCGGGAATACCATTTGCTCACCAACTACAAGCGAAAGCCGGGAAAAAGGTAGGTGTCGTGGGTTTAGTTCCTTGTGCTAGAGGTGGCACTGTAATCAAACAATGGATTAAAAATCCTAACAATCCTGATGCAACGTTTTACCAAAATTTCATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTACGCGCTCTTTTCTGGTTTCAAGGGGAAAGTGATGCTGCTATGAGTGACACTGCTAGTAGATACAAAGACAACCTAAAGAAGTTCATTACCGACATCCGCAATGATATAAAGCCTAGATTTTTACCTGTCATTATTGTTAAGATAGCCCTCTATGACTTTTTTATGCAACATGATACGCATGATTTGGCAGCAGTGAGGCGGCCGAAGATGCAGTCCAACAAGAGCTGCCAGACATCGTTACAATCGACTCCTTGA ATGTACGATGTTATTTGGCTCTTCCCTTTCAAGGGCTACTTCTCCTACAAACATATTCATCCTTGCCGGTCAGAGCAACATGGCTGGTCGAGGTGGGTTGATGAAAATCAAACGGGACAACTTATGTGGGATGGGTATGTGCCACCAGAGTGTCAACCCGACCCATCCATTGTACGATTGAACCCTGAGCGCCAATGGGAGCTAGCACGAGAGCCTCTCCACGAGGGAATTGATATCGGCAAGGCCACTGGGGTTGGTCCGGGAATACCATTTGCTCACCAACTACAAGCGAAAGCCGGGAAAAAGGTAGGTGTCGTGGGTTTAGTTCCTTGTGCTAGAGGTGGCACTGTAATCAAACAATGGATTAAAAATCCTAACAATCCTGATGCAACGTTTTACCAAAATTTCATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTACGCGCTCTTTTCTGGTTTCAAGGGGAAAGTGATGCTGCTATGAGTGACACTGCTAGTAGATACAAAGACAACCTAAAGAAGTTCATTACCGACATCCGCAATGATATAAAGCCTAGATTTTTACCTGTCATTATTGTTAAGATAGCCCTCTATGACTTTTTTATGCAACATGATACGCATGATTTGGCAGCAGTGAGGCGGCCGAAGATGCAGTCCAACAAGAGCTGCCAGACATCGTTACAATCGACTCCTTGA ATGTACGATGTTATTTGGCTCTTCCCTTTCAAGGGCTACTTCTCCTACAAACATATTCATCCTTGCCGGTCAGAGCAACATGGCTGGTCGAGGTGGGTTGATGAAAATCAAACGGGACAACTTATGTGGGATGGGTATGTGCCACCAGAGTGTCAACCCGACCCATCCATTGTACGATTGAACCCTGAGCGCCAATGGGAGCTAGCACGAGAGCCTCTCCACGAGGGAATTGATATCGGCAAGGCCACTGGGGTTGGTCCGGGAATACCATTTGCTCACCAACTACAAGCGAAAGCCGGGAAAAAGGTAGGTGTCGTGGGTTTAGTTCCTTGTGCTAGAGGTGGCACTGTAATCAAACAATGGATTAAAAATCCTAACAATCCTGATGCAACGTTTTACCAAAATTTCATTGAACGAATCAAAGCATCAGATAAAGAAGGTGGGGTTGTACGCGCTCTTTTCTGGTTTCAAGGGGAAAGTGATGCTGCTATGAGTGACACTGCTAGTAGATACAAAGACAACCTAAAGAAGTTCATTACCGACATCCGCAATGATATAAAGCCTAGATTTTTACCTGTCATTATTGTTAAGATAGCCCTCTATGACTTTTTTATGCAACATGATACGCATGATTTGGCAGCAGTGAGGCGGCCGAAGATGCAGTCCAACAAGAGCTGCCAGACATCGTTACAATCGACTCCTTGA MYDVIWLFPFKGYFSYKHIHPCRSEQHGWSRWVDENQTGQLMWDGYVPPECQPDPSIVRLNPERQWELAREPLHEGIDIGKATGVGPGIPFAHQLQAKAGKKVGVVGLVPCARGGTVIKQWIKNPNNPDATFYQNFIERIKASDKEGGVVRALFWFQGESDAAMSDTASRYKDNLKKFITDIRNDIKPRFLPVIIVKIALYDFFMQHDTHDLAAVRRPKMQSNKSCQTSLQSTP Homology
BLAST of Tan0000543 vs. ExPASy Swiss-Prot
Match: Q8L9J9 (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 142.9 bits (359), Expect = 4.6e-33 Identity = 71/175 (40.57%), Postives = 104/175 (59.43%), Query Frame = 0
BLAST of Tan0000543 vs. NCBI nr
Match: XP_023002177.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002870.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002871.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86 Identity = 151/184 (82.07%), Postives = 168/184 (91.30%), Query Frame = 0
BLAST of Tan0000543 vs. NCBI nr
Match: XP_023002892.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86 Identity = 151/184 (82.07%), Postives = 168/184 (91.30%), Query Frame = 0
BLAST of Tan0000543 vs. NCBI nr
Match: XP_023537922.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.0 bits (837), Expect = 1.3e-85 Identity = 149/184 (80.98%), Postives = 168/184 (91.30%), Query Frame = 0
BLAST of Tan0000543 vs. NCBI nr
Match: XP_038886442.1 (probable carbohydrate esterase At4g34215 [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 5.0e-85 Identity = 147/184 (79.89%), Postives = 163/184 (88.59%), Query Frame = 0
BLAST of Tan0000543 vs. NCBI nr
Match: KAG6585833.1 (Carbohydrate esterase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.9 bits (829), Expect = 1.1e-84 Identity = 149/184 (80.98%), Postives = 167/184 (90.76%), Query Frame = 0
BLAST of Tan0000543 vs. ExPASy TrEMBL
Match: A0A6J1KIR8 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111496116 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86 Identity = 151/184 (82.07%), Postives = 168/184 (91.30%), Query Frame = 0
BLAST of Tan0000543 vs. ExPASy TrEMBL
Match: A0A6J1KKV2 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111496632 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86 Identity = 151/184 (82.07%), Postives = 168/184 (91.30%), Query Frame = 0
BLAST of Tan0000543 vs. ExPASy TrEMBL
Match: A0A6J1I774 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111471873 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 9.2e-85 Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0
BLAST of Tan0000543 vs. ExPASy TrEMBL
Match: A0A6J1GK48 (probable carbohydrate esterase At4g34215 OS=Cucurbita moschata OX=3662 GN=LOC111454647 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84 Identity = 148/184 (80.43%), Postives = 167/184 (90.76%), Query Frame = 0
BLAST of Tan0000543 vs. ExPASy TrEMBL
Match: A0A6J1BQ38 (probable carbohydrate esterase At4g34215 OS=Momordica charantia OX=3673 GN=LOC111004778 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 2.0e-84 Identity = 147/184 (79.89%), Postives = 166/184 (90.22%), Query Frame = 0
BLAST of Tan0000543 vs. TAIR 10
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 146.4 bits (368), Expect = 3.0e-35 Identity = 74/168 (44.05%), Postives = 104/168 (61.90%), Query Frame = 0
BLAST of Tan0000543 vs. TAIR 10
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 142.9 bits (359), Expect = 3.3e-34 Identity = 71/175 (40.57%), Postives = 104/175 (59.43%), Query Frame = 0
BLAST of Tan0000543 vs. TAIR 10
Match: AT4G34215.2 (Domain of unknown function (DUF303) ) HSP 1 Score: 142.9 bits (359), Expect = 3.3e-34 Identity = 71/175 (40.57%), Postives = 104/175 (59.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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