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Tan0000505 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCACAGACGCAATTTTTGAACTTTCCACACTATTATTTATACTTCCCTTTCTTCCACTTCAAAACCCCATTTGCTATCTCTCTCTCTTCTCTCTCTCTTCTCTCTCTCTCACTCATAGTTCTTATGGCCAAAGAAAACTCCACCAATAATTCCCTTTGCCACGGCGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGATTTTCTCAACACCAACCACCCTAATTCTGATCATCCCACCTCCTTCTCTTCTTCTTATCTCTCTCACGATCAAAGCTACTCCGTGGCCGACGCCGCCTCCTCCGTCGCCGATCACAAAGACGCTGCTGCGGGGGATCCCGGGTTGACCAGCAAAGATCATATGAACTTTTTCAAGAAGAGGAAGATCATCAAAGATTTGTTTGTTGAAGATGAAGCTTTGGAGGATACTGCTACCTCTCCTGTTAATAGTCCAAAGGTGTGGGATTCTTTCTTTTCTTTTTTTTTATTCCAATTTTATTTTGTGGGGATGAATATGAATAAAAATTTAAGGTCGCGTTGGATAACCATTTGATTTTTTTTTTATTTCATTTTTAGCCAAATTTCAAAAACGTCAAAAACTTCTTTATGAAAACTACTTTTTTTAGTTTCCAATACATGGCTTGGTTTTTTTAAAAAAAATATGTAAAAAGTAGATAACAAATCAAGGAAATCCATCGGTGAAGAAGTATTTATAGACTTAATTTTTAAAAATCAAAAAACTAAAATGATTATCAAACGGGACCTAAATTTATCGAAACGTTATTTAATGGTTAGTTAACATGGTATCAAATGAGGTTTTGCGCTCAATACTTGTATAGTATTATTATTTCTTTTACAATTAATATTGGATTTTTAAATTGAGAGGGTTGAGAATATGAATAAATGATTAAATTTATCTAGACTCGAGTTTAATTTAAGTTTTTGAGTTCAGTTTTTTCTGATGGGTTTTCTTGGACTTGAAAATAAGCAGGTTTCTGATTCAACCTACTTCAGTAAAAACCAGAAGCATAAAGAGAATCTGATCATAACTCCTCAGGTAAACATACAGAAGTGGCAAAACCAAAGATATTGTTTAAAAGATTCAAACTTTTTAATTAGGGTATATTTGGAATCCCATTTTTTTTCAAGAAAAAACACTAATTTTTGAGAAAAATAAAATAATAATGGATGTGTTTTTTTGGGCAGGTAAATGAGAGAAGAGAAATGGGTTTTGTTGGCAGTAACTACACAGAATTGAAGAAAAGAGGTCTTTGCTTGGTACCTTTGTCTATGGTAGTTAATTATTTGGCTGAATAA GCCACAGACGCAATTTTTGAACTTTCCACACTATTATTTATACTTCCCTTTCTTCCACTTCAAAACCCCATTTGCTATCTCTCTCTCTTCTCTCTCTCTTCTCTCTCTCTCACTCATAGTTCTTATGGCCAAAGAAAACTCCACCAATAATTCCCTTTGCCACGGCGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGATTTTCTCAACACCAACCACCCTAATTCTGATCATCCCACCTCCTTCTCTTCTTCTTATCTCTCTCACGATCAAAGCTACTCCGTGGCCGACGCCGCCTCCTCCGTCGCCGATCACAAAGACGCTGCTGCGGGGGATCCCGGGTTGACCAGCAAAGATCATATGAACTTTTTCAAGAAGAGGAAGATCATCAAAGATTTGTTTGTTGAAGATGAAGCTTTGGAGGATACTGCTACCTCTCCTGTTAATAGTCCAAAGGTTTCTGATTCAACCTACTTCAGTAAAAACCAGAAGCATAAAGAGAATCTGATCATAACTCCTCAGGTAAATGAGAGAAGAGAAATGGGTTTTGTTGGCAGTAACTACACAGAATTGAAGAAAAGAGGTCTTTGCTTGGTACCTTTGTCTATGGTAGTTAATTATTTGGCTGAATAA ATGGCCAAAGAAAACTCCACCAATAATTCCCTTTGCCACGGCGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGATTTTCTCAACACCAACCACCCTAATTCTGATCATCCCACCTCCTTCTCTTCTTCTTATCTCTCTCACGATCAAAGCTACTCCGTGGCCGACGCCGCCTCCTCCGTCGCCGATCACAAAGACGCTGCTGCGGGGGATCCCGGGTTGACCAGCAAAGATCATATGAACTTTTTCAAGAAGAGGAAGATCATCAAAGATTTGTTTGTTGAAGATGAAGCTTTGGAGGATACTGCTACCTCTCCTGTTAATAGTCCAAAGGTTTCTGATTCAACCTACTTCAGTAAAAACCAGAAGCATAAAGAGAATCTGATCATAACTCCTCAGGTAAATGAGAGAAGAGAAATGGGTTTTGTTGGCAGTAACTACACAGAATTGAAGAAAAGAGGTCTTTGCTTGGTACCTTTGTCTATGGTAGTTAATTATTTGGCTGAATAA MAKENSTNNSLCHGGGDQSPEESGWTIYFEDFLNTNHPNSDHPTSFSSSYLSHDQSYSVADAASSVADHKDAAAGDPGLTSKDHMNFFKKRKIIKDLFVEDEALEDTATSPVNSPKVSDSTYFSKNQKHKENLIITPQVNERREMGFVGSNYTELKKRGLCLVPLSMVVNYLAE Homology
BLAST of Tan0000505 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.4e-12 Identity = 59/157 (37.58%), Postives = 76/157 (48.41%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.3e-11 Identity = 62/189 (32.80%), Postives = 87/189 (46.03%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 52/177 (29.38%), Postives = 88/177 (49.72%), Query Frame = 0
BLAST of Tan0000505 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64 Identity = 143/182 (78.57%), Postives = 154/182 (84.62%), Query Frame = 0
BLAST of Tan0000505 vs. NCBI nr
Match: KAG7015212.1 (hypothetical protein SDJN02_22845, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.3 bits (599), Expect = 3.9e-58 Identity = 130/181 (71.82%), Postives = 151/181 (83.43%), Query Frame = 0
BLAST of Tan0000505 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 234.2 bits (596), Expect = 8.6e-58 Identity = 125/180 (69.44%), Postives = 145/180 (80.56%), Query Frame = 0
BLAST of Tan0000505 vs. NCBI nr
Match: XP_022941072.1 (vascular-related unknown protein 4-like [Cucurbita moschata]) HSP 1 Score: 234.2 bits (596), Expect = 8.6e-58 Identity = 130/181 (71.82%), Postives = 150/181 (82.87%), Query Frame = 0
BLAST of Tan0000505 vs. NCBI nr
Match: KAG6607814.1 (Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231.5 bits (589), Expect = 5.6e-57 Identity = 129/181 (71.27%), Postives = 150/181 (82.87%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.2e-58 Identity = 125/180 (69.44%), Postives = 145/180 (80.56%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy TrEMBL
Match: A0A6J1FLD8 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 4.2e-58 Identity = 130/181 (71.82%), Postives = 150/181 (82.87%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy TrEMBL
Match: A0A6J1J018 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.5e-57 Identity = 129/183 (70.49%), Postives = 150/183 (81.97%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy TrEMBL
Match: A0A6J1IHA8 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 3.3e-55 Identity = 123/180 (68.33%), Postives = 141/180 (78.33%), Query Frame = 0
BLAST of Tan0000505 vs. ExPASy TrEMBL
Match: A0A6J1IG62 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51 Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0
BLAST of Tan0000505 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 5.3e-13 Identity = 59/157 (37.58%), Postives = 76/157 (48.41%), Query Frame = 0
BLAST of Tan0000505 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-12 Identity = 62/189 (32.80%), Postives = 87/189 (46.03%), Query Frame = 0
BLAST of Tan0000505 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08 Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of Tan0000505 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 7.4e-07 Identity = 52/177 (29.38%), Postives = 88/177 (49.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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