Tan0000433 (gene) Snake gourd v1

Overview


Name	Tan0000433
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nucleolin 1
Location	LG04: 87167979 .. 87170064 (-)
RNA-Seq Expression	Tan0000433
Synteny	Tan0000433

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGACACGTCGGGAAGGAACCGAAGCTTCGAATCTAAGCCACCGCTCGGCGACGGCGGGCAAAAAAGAAAACGTTCCGAAATTTCAGCTAAAATTTTCGGAGCAGCACTTAAAATCAATGGAGGTAGCCGGCGAAGACGGTTCAAAGTTAGTTCTAAGAGAGCCGGTGACAATCTTCGGAAGAGGCTCAGGTTTCGGTTCAAAAGATCGAACAGTATCCCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCACGGAGTCTTTGGTTTCCTTCGAGGTTATCGGGAGGAACCCTATCTGGGTTCGTAGCGGCAGAAATGGCAAAATCAGAGCATTTAGAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGATTTGGTTCAAATTAAACAAAATCGCTGCATTCGAAGAAGGGGAGCAAATTGGTCCGAAGATCGAGAACGAATTTGTTGAAAGATTGACGCGTTCTTCGGATTCGGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGGTTTGCTCCTGAAATTCTTTCTAGTTGTCCCGAGAAAATGTAGAGAAAAGTAATCGAAATCATCAATTGTTTGCAAATTATACGTAGGATTTTGGTAACGAGAAGAAAAAATAGCCGATACTAAAAACAAAAGAAACGATAAAATTGTTTCAGAAGTTAAAAATTGCGAATCGATGATACTGTTTTTACTGTTCCCTTGTCAGAATTTGGTTTTCTTGTTATGGACATGAATTTGAATGCTGTCAAAGGTTGCTCCCGCAAATCTATCTAGTTTTCCCGAGAAAATTCAAGCTTTTCCAGATTGTTTACAGCGACAAAATTAGCAGATACTAAAGAGAACAAACGACTAATTTGTTTTATAAGTTCCCAATTGTGAATCGATGATACTGACCACTGATTGTTCTTACTGTTTCCTTGTCAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGGTGAGAAAAGACAGTGATGAAGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTTAGGGGAAAGAGGAAAAAAGGAGCAAATAGTGATGACGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGACTGCAAAATCAAAGAAGTTTCAAAGACCAAAATACTCCACAAGATCAAAAGATCACTATAAAACTCACAAGGATCAAAAGAAAGCTGCTAAATCTAATAAAGTCTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTCGGACGATGATGAGGAGGAAGATTGATGGAGCTAATGGTTTTGGTTGTTGACTGCTGCTAACCTAGGCTTGCTCTAGAAAGGTTTGTCTTTGTATAGTACTTTCCTTTTTAGTCTCATAATCTTGTGAAATATAGAAGAAAGATCAGTTATGCTGTAGTTCAAATTGTAGGTTGAAAGTGATCTTCAGTTTCTTCTCCAATGGTTGATTATTTTCGATGTTGAAAAATTTGATAGCCTTCTTGTAATCTTCTTTTGTCTCTTGTTCTAAGGTTGAGCATCTCATCTCCTTTACAGACTTCTTTCCTAAACTTCCATTTATCTGAATTATTATTGTTTTCCTCTTAATAGGGCTCTTACTGTTGTTTGGATTCTTTTGTTAGCTAACCATGTGCATTGGTTCTTAGAAAATGAAGAGAAATACTGCATCATTCCCATACTCTGGATGCTTTAGAATTATTTCATTTTGTTTTTATGACTTGTTATTCATGAACCTGCAATAGGTGAAGTTTTATCAGGTGTCATTAACAGTCAATCATCATCCTTGTACTGAACTCGGGACACAGTATCGACATTGGTGTTAATGTTATTCTTGCTTCGATGGAACATCGTAGTAATATGCAAGGGCGTAAGAAGGTAATTTTAGATTACTGGTAGATCCAAAAGCTTATAG

mRNA sequence

GCGACACGTCGGGAAGGAACCGAAGCTTCGAATCTAAGCCACCGCTCGGCGACGGCGGGCAAAAAAGAAAACGTTCCGAAATTTCAGCTAAAATTTTCGGAGCAGCACTTAAAATCAATGGAGGTAGCCGGCGAAGACGGTTCAAAGTTAGTTCTAAGAGAGCCGGTGACAATCTTCGGAAGAGGCTCAGGTTTCGGTTCAAAAGATCGAACAGTATCCCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCACGGAGTCTTTGGTTTCCTTCGAGGTTATCGGGAGGAACCCTATCTGGGTTCGTAGCGGCAGAAATGGCAAAATCAGAGCATTTAGAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGATTTGGTTCAAATTAAACAAAATCGCTGCATTCGAAGAAGGGGAGCAAATTGGTCCGAAGATCGAGAACGAATTTGTTGAAAGATTGACGCGTTCTTCGGATTCGGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGGTGAGAAAAGACAGTGATGAAGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTTAGGGGAAAGAGGAAAAAAGGAGCAAATAGTGATGACGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGACTGCAAAATCAAAGAAGTTTCAAAGACCAAAATACTCCACAAGATCAAAAGATCACTATAAAACTCACAAGGATCAAAAGAAAGCTGCTAAATCTAATAAAGTCTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTCGGACGATGATGAGGAGGAAGATTGATGGAGCTAATGGTTTTGGTTGTTGACTGCTGCTAACCTAGGCTTGCTCTAGAAAGGTGAAGTTTTATCAGGTGTCATTAACAGTCAATCATCATCCTTGTACTGAACTCGGGACACAGTATCGACATTGGTGTTAATGTTATTCTTGCTTCGATGGAACATCGTAGTAATATGCAAGGGCGTAAGAAGGTAATTTTAGATTACTGGTAGATCCAAAAGCTTATAG

Coding sequence (CDS)

ATGGAGGTAGCCGGCGAAGACGGTTCAAAGTTAGTTCTAAGAGAGCCGGTGACAATCTTCGGAAGAGGCTCAGGTTTCGGTTCAAAAGATCGAACAGTATCCCGTCGTCACATTTTAATCGAAGCTAAAACCTCAGAGAACAGTAATGGAGCTCCCACGGAGTCTTTGGTTTCCTTCGAGGTTATCGGGAGGAACCCTATCTGGGTTCGTAGCGGCAGAAATGGCAAAATCAGAGCATTTAGAAGATCGGAAAAGGGCGAGATGGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGATTTGGTTCAAATTAAACAAAATCGCTGCATTCGAAGAAGGGGAGCAAATTGGTCCGAAGATCGAGAACGAATTTGTTGAAAGATTGACGCGTTCTTCGGATTCGGAGGATATCGATGTTTCTGGCATTGATCCTGTCAAAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGGTGAGAAAAGACAGTGATGAAGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTTAGGGGAAAGAGGAAAAAAGGAGCAAATAGTGATGACGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGACTGCAAAATCAAAGAAGTTTCAAAGACCAAAATACTCCACAAGATCAAAAGATCACTATAAAACTCACAAGGATCAAAAGAAAGCTGCTAAATCTAATAAAGTCTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGATAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTCGGACGATGATGAGGAGGAAGATTGA

Protein sequence

MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFEVIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEVRKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSKDHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED

Homology

[Close]

BLAST of Tan0000433 vs. NCBI nr
Match: XP_022152655.1 (protein bfr2 [Momordica charantia])

HSP 1 Score: 507.3 bits (1305), Expect = 9.1e-140
Identity = 259/300 (86.33%), Postives = 279/300 (93.00%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLV+ EPVTIFGRGSGF SKDRTVSRRH+LIEAKTSEN +GAP E  +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIGRNPIWVRSG+NG+IR FRRSEKGE+APGESFCVGGQEP WFKLNKIA  EEG++I P
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIAEIEEGKRIVP 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
           K E++F ERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEP 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RK SD+DEDYGR+K+RGVRGKRKKGANSDDEDWTDENEDAVEM AK+KK QRPKYSTRSK
Sbjct: 181 RKGSDDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED 300
           DH KT+KDQ KAA SNK YDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD+E++
Sbjct: 241 DHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDEDE 300

[Close]

BLAST of Tan0000433 vs. NCBI nr
Match: XP_038898830.1 (protein PIF [Benincasa hispida])

HSP 1 Score: 465.7 bits (1197), Expect = 3.0e-127
Identity = 251/307 (81.76%), Postives = 264/307 (85.99%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF SKDRTVSRRHILIEAKTSENSNGAP E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPIEPTVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIGRNPIWVRS +NG+IR FRRSEKGEMA GESFCVG QEPIWF+LNKIA FEE +Q   
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGEMALGESFCVGSQEPIWFELNKIAEFEERKQF-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLDE 
Sbjct: 121 ---------FSRSSDSVDIDVSGIDPVKEFGFLAMGHEFECYGNRVIRDPKKWDWFLDEP 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD+DEDYGRKKKRGV+GKRKKGANSDDEDWTDENEDAVEM  K+KKF+RPKYSTRSK
Sbjct: 181 RKDSDDDEDYGRKKKRGVKGKRKKGANSDDEDWTDENEDAVEMITKTKKFRRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDED-----EEEEF 300
           D +KT  DQKKAA+SNK YD   EEDEDDETLGGFIVDDE DN EQMDED     EEEEF
Sbjct: 241 DRHKTPNDQKKAARSNKDYDEEVEEDEDDETLGGFIVDDEEDNVEQMDEDEDEDEEEEEF 296

[Close]

BLAST of Tan0000433 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 1.2e-126
Identity = 245/300 (81.67%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSR HILI+AKTSENSNG P E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQEP+WF+LNKIA FEEGE+I  
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKI-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 ---------CSRSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDER 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD++EDYGRK+K  VRGKRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSK
Sbjct: 181 RKDSDDEEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE 300
           D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD E++
Sbjct: 241 DRNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKEDD 289

[Close]

BLAST of Tan0000433 vs. NCBI nr
Match: KAG7018280.1 (hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461.8 bits (1187), Expect = 4.4e-126
Identity = 244/300 (81.33%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQE +WF+LNKI  FEEGE+I  
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKI-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +R SDSEDIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 ---------CSRCSDSEDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDER 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD+DEDYGRK+K  VRGKRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSK
Sbjct: 181 RKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED 300
           D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   DDEE+D
Sbjct: 241 DSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDEEDD 289

[Close]

BLAST of Tan0000433 vs. NCBI nr
Match: XP_022955501.1 (uncharacterized protein LOC111457508 [Cucurbita moschata])

HSP 1 Score: 459.9 bits (1182), Expect = 1.7e-125
Identity = 242/300 (80.67%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVT FGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQEP+WF+LNKIA FEEGE+I  
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKI-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 ---------CSRSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEW 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD+DEDYGRK+K  VRGKRKKGAN+DDEDWTDENEDAVEM  K+KKFQRP+YSTRS 
Sbjct: 181 RKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPQYSTRSN 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED 300
           D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   D EE+D
Sbjct: 241 DSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDGEEDD 289

[Close]

BLAST of Tan0000433 vs. ExPASy TrEMBL
Match: A0A6J1DEJ6 (protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.4e-140
Identity = 259/300 (86.33%), Postives = 279/300 (93.00%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLV+ EPVTIFGRGSGF SKDRTVSRRH+LIEAKTSEN +GAP E  +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIGRNPIWVRSG+NG+IR FRRSEKGE+APGESFCVGGQEP WFKLNKIA  EEG++I P
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIAEIEEGKRIVP 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
           K E++F ERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEP 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RK SD+DEDYGR+K+RGVRGKRKKGANSDDEDWTDENEDAVEM AK+KK QRPKYSTRSK
Sbjct: 181 RKGSDDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED 300
           DH KT+KDQ KAA SNK YDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD+E++
Sbjct: 241 DHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDEDE 300

[Close]

BLAST of Tan0000433 vs. ExPASy TrEMBL
Match: A0A6J1J012 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.6e-127
Identity = 245/300 (81.67%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF  KDRTVSR HILI+AKTSENSNG P E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQEP+WF+LNKIA FEEGE+I  
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKI-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 ---------CSRSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDER 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD++EDYGRK+K  VRGKRKKGAN+DDEDWTDENEDAVEM  K+KKFQRPKYSTRSK
Sbjct: 181 RKDSDDEEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPKYSTRSK 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDEEE 300
           D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD E++
Sbjct: 241 DRNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDDKEDD 289

[Close]

BLAST of Tan0000433 vs. ExPASy TrEMBL
Match: A0A6J1GTX9 (uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC111457508 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 8.1e-126
Identity = 242/300 (80.67%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVT FGRGSGF  KDRTVSRRHILI+AKTSENSNG P E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIG+NPIWVRSG+NG+IR FR SEKGEM PGESFC+GGQEP+WF+LNKIA FEEGE+I  
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKI-- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE 
Sbjct: 121 ---------CSRSSDSDDIDVSGIDPVKEFGFLAKGHEFECYGNRVIRDAKKWDWFLDEW 180

Query: 181 RKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRSK 240
           RKDSD+DEDYGRK+K  VRGKRKKGAN+DDEDWTDENEDAVEM  K+KKFQRP+YSTRS 
Sbjct: 181 RKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRPQYSTRSN 240

Query: 241 DHYKTHKDQKKAAKSNKVYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDEEED 300
           D  KTHKDQKKAAKSNK Y EEDEDDETLGGFIVDDEVDNEE MDEDE+EE   D EE+D
Sbjct: 241 DSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEFSDGEEDD 289

[Close]

BLAST of Tan0000433 vs. ExPASy TrEMBL
Match: A0A5D3BXV5 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.8e-124
Identity = 242/304 (79.61%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF SKDRT+SRRHILIEAKTS+N+NGAP E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIGRNPIWVRS +NG+IR FRRSEKG+MAPGESFCVGGQEPIWF+LNKI  FEEG+ +  
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVS- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD  
Sbjct: 121 ----------SRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGP 180

Query: 181 RKDS-DEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRS 240
            KDS D+DEDY RKKKRGVRGKRKKGANSDDEDWTDENEDAV+M  K +K QRPKYSTRS
Sbjct: 181 SKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRS 240

Query: 241 KDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD 300
           KD  K   DQ+KAAKSNK YD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Sbjct: 241 KDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDE 293

[Close]

BLAST of Tan0000433 vs. ExPASy TrEMBL
Match: A0A1S3BHB4 (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.8e-124
Identity = 242/304 (79.61%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPVTIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSFE 60
           ME+AGEDGSKLVLREPVTIFGRGSGF SKDRT+SRRHILIEAKTS+N+NGAP E  VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVRSGRNGKIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQIGP 120
           VIGRNPIWVRS +NG+IR FRRSEKG+MAPGESFCVGGQEPIWF+LNKI  FEEG+ +  
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVS- 120

Query: 121 KIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEV 180
                     +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD  
Sbjct: 121 ----------SRSSDSDDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDVKKWDWFLDGP 180

Query: 181 RKDS-DEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYSTRS 240
            KDS D+DEDY RKKKRGVRGKRKKGANSDDEDWTDENEDAV+M  K +K QRPKYSTRS
Sbjct: 181 SKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQRPKYSTRS 240

Query: 241 KDHYKTHKDQKKAAKSNKVYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD 300
           KD  K   DQ+KAAKSNK YD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Sbjct: 241 KDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEEEEFLDDE 293

[Close]

BLAST of Tan0000433 vs. TAIR 10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 208.4 bits (529), Expect = 8.1e-54
Identity = 136/313 (43.45%), Postives = 195/313 (62.30%), Query Frame = 0


Query: 1   MEVAGEDGSKLVLREPV-TIFGRGSGFGSKDRTVSRRHILIEAKTSENSNGAPTESLVSF 60
           ME+ GEDG+KL L+  V  +FGRG+GF ++D TVSRRH+ +  K +  + G     +VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVRSGRNG-KIRAFRRSEKGEMAPGESFCVGGQEPIWFKLNKIAAFEEGEQI 120
           EV+GRNP+W+R+   G KI+  R+ E GE+A G+ FCV G  PIWF L            
Sbjct: 74  EVLGRNPVWIRAVEKGKKIQTLRKPETGEIATGDQFCVSGNHPIWFTL------------ 133

Query: 121 GPKIENEFVERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFL- 180
             K  +E +E   R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD K+W+WFL 
Sbjct: 134 --KRRDEVMEE--RALDHGEIELN-IDPVKEFGFLVIGKEFDQYPKSRVRDIKQWEWFLE 193

Query: 181 DEVRKDSDEDEDYGRKKKRGVRGKRKKGANSDDEDWTDENEDAVEMTAKSKKFQRPKYST 240
           D    +SD DED  +K ++G+  KR++   ++D+DW+ E+++  E+  KSK+   P YST
Sbjct: 194 DSTNGNSDGDEDGDKKGRKGLGKKRRRKKGNEDDDWSVESDEDKELMVKSKRVVTPTYST 253

Query: 241 RSKDHYKTHKDQKKAAKSNK----------VYDEEDEDDETLGGFIVDDEVDNEEQMDED 300
           RSK   KT KD   ++ S+             +EED+DDETLGGFIV DE    E+ +E+
Sbjct: 254 RSK---KTKKDSNASSSSSNGAQTKQRGRADVEEEDDDDETLGGFIVSDEEAKLEEEEEE 304

The following BLAST results are available for this feature:

BLAST of Tan0000433 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000433 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152655.1	9.1e-140	86.33	protein bfr2 [Momordica charantia]	[more]
XP_038898830.1	3.0e-127	81.76	protein PIF [Benincasa hispida]	[more]
XP_022980683.1	1.2e-126	81.67	protein BFR2 [Cucurbita maxima]	[more]
KAG7018280.1	4.4e-126	81.33	hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955501.1	1.7e-125	80.67	uncharacterized protein LOC111457508 [Cucurbita moschata]	[more]

BLAST of Tan0000433 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEJ6	4.4e-140	86.33	protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1	[more]
A0A6J1J012	5.6e-127	81.67	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1	[more]
A0A6J1GTX9	8.1e-126	80.67	uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A5D3BXV5	9.8e-124	79.61	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE...	[more]
A0A1S3BHB4	9.8e-124	79.61	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]

BLAST of Tan0000433 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13780.1	8.1e-54	43.45	SMAD/FHA domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 3..110 e-value: 3.8E-13 score: 51.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..300
None	No IPR available	PANTHER	PTHR37733	SMAD/FHA DOMAIN-CONTAINING PROTEIN	coord: 1..299
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 7..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000433.2	Tan0000433.2	mRNA
Tan0000433.1	Tan0000433.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding