Tan0000403 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCCTTGTAATTATTCAGCAATCTTCCTTCAATTCGTTGTTCTCTGCTTCATCTTCATTTTTCTGTTTCCAGTTCCATTGCTCTGCTGCTCATTTCGATTCCCAATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAGTGAGTCTTTTGTTTGCTTTCTTTTCTTTTCTTTTCTTTATCTTCATTTTTACATGAAATGATTGATTCGTTTGGTTATTTGTTTTTTGGGTATCTAAAGATTAGAGAAGATTCGGGTCGCTGTAATTCAATTCTTCATGTTTGAATTTAATCAGAAAATGGTATGAATGTTTGATTTGGGAAGCGTTTCATTTCACTTCATCGATTAGAAAAGGTTCTTAAATCCATGGCATCTGACTGGTTGACTGTACATTACTTATTCCATTGTCACATCTGTCGTTTTGTTGTCTTCTGCTTGAGCTTGTCTTGTTAGCTACTTCTATTTGCAACATGTTGCTGTGTTACTGTATTACAATAGTATTCCAGTTTCTTTTGTGGAGAAGAGTGAGCATCTGTCCCCCTATCGATGGAATAGCTTTGCTTTTTAAGGATTAAACCTAATAGTTCTTAAATCCATGTTAATTGAAGACTACCGTAGATTTGTCTATCATAAACCAATTTTCCCATTTAATGGCTTCAGCTACTAAAGAGGATAGGATGCACAATGTAGTTGATTTTTCGTACATATAAGAACGTAATTGAGTACACCTTCGCATTGAAACTGAGTATGACACTACTATTAATCTGTGGCAGCTTCAGATTGTGTGTGCATGTGTATATGTTTTTTTTGTGAATTTTTTCTATTTCCTCTCTCTCATTTGTATTGTATTTACTCCTTCAATGCTTATTACAATATGGGAAGTTTAATATAAAATCAATATGAAATTTTCTGATTAAGGTGTGGTTGATTTAACAAAAGAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTGAATTAGTTGTAAGAATGGTTTAACTTTCTTTCCCTCCCTCCTTTCTCGGGTATTCGCCATGCATACATCAAATTGAACATATTTTGAATTTTCATTTTCAAGTTTTGCTACCAAATTTGATCCCTATCTCACAAATTCTTTTAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTGATTTTTCTGTCCTTTAGGCTTATGTCATTATACATCCTTATCTATCGATAAAGTATGTTATTACCTTACAGATCTGCTATTCAAATATTCAACTTAGTTTACTAGTAATATAAGTTCATGAGCATAGCTATTAGCAATTGCTTCCTCTTAAGATAATGGTTATTATATACTCATTGTGAAGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTGAGAATTGGGATCATTTCTAATTTCTGAACAATATATATATATATATATATATGGTTTTATTGGATTTTCCCTGCCAGTGCTCAATTTAAATTTTAAGAAGGATACTATCTTTGTAACTCGTAATTAGAAATATTATTAGGGTATTAAAGGCATATTAATAAATAGCCCATGGGTTTGTAAGTAGGAGTTGATTATAAAGAGTGAGTAGGAGGAGAGGAGGGTAAACAATTGGTTAGTGGGTTTAGGCTTAAGTGAGAATACTCGAGAAGGAGGTTCAAGTACCTAGGGAGTTATTTTAATCCTTTATCCTTTTATCTTTCAATATTATTCTAGTTATTTGGCCTTTATGACTCTCCTTAATAAAACAGTGTTTTCATTAAGATGGTTTTGAATTTCATAATAATTGTTTGCCAACAAAAGCATAACGCTCAACTGTCATAAGTATGTGTTTATGACCAAGAGGTCATAGGTTCAAATCCCCCCATTATTGTTGAACTCAAATTTCATAATAATTGTTTGTACCATGGCATTTGGAATATTAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTACCTTTTTTCCACTCTATTTTTCCTAAGTTCATTTTCAGGGTCTATTTGGTCAGCTTTTGCTCTTCCACTGTCTTTGTCGATTTACATGAATCAGAATCTTTCTCTCTCTGAACACAAACGTGGTTTACTTTGGACCTCTAGCTGATGAACATTTATAAGACATACAAGCAGAGTAGCTTTCCATTCCCTCTACCTCACTGTAATGGAACTGCTTCTGCTCATTTGAATGGTCACTTTTTGTGAAACTGACTTCTTTTCAGGCTGATTGTAGGATGACCTTTTTTTTTGCTATCGATTCTTTTTAGAGGGGAAAATAACATGTCCATGTTCTTTCAGAAGTATCTATAAAAGATCTTATAGCAGCTTTCAAGGTTTTCAAGAACACTTTTTTTATGTAGGGTTGTAAGTAGGTTGATTAGAGTCATTTTATTGTTCAAAACTCGTTCTGAACAGGCCTATCAAAATTGAAACTAGACGCTGAAACCAGTGTTCTAAAAAACAGAATCGACTATCTGACCACAATCAGCAGAAAAACAACCAGATGATCAAACCAAACTAGCTGGAATACGTTGCTTTTGAATTTTATGAAACTAAACCAACCGACCCTTATTGGTAGACCAATGACACGACACCATCTCGATTCGTTAATTTGTGATTTTTTTTCTTGCGTTCTTCATCTGTGGCTTGCCCCCCTGTTTTTATATATTACCAAATATCATGAAAATTTTAGAATCTTGAAAAGTATTCTCAAGTACATTACATATGTTTTTTCACAACATTATTCCTGGCTGTAGAGTTATTTAAATCCTTTGAACTTGATCATAATGTGTCACCTTCTTTTAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGAGGCAAATTCATCGTTTATTGCTCGTCTTTTCACTCGTGACAATTGAATCCTTCTGTAAATAAGCGAAGTTATAAATACTAAAGGAGCAGATTGAAAGCTTTATTGTTGAAAAATATAATGTAAAGAAATTCTATATAGGCAACTTTGATTGTGAAAATTATACCAATATCATTGAC TTCTCCTTGTAATTATTCAGCAATCTTCCTTCAATTCGTTGTTCTCTGCTTCATCTTCATTTTTCTGTTTCCAGTTCCATTGCTCTGCTGCTCATTTCGATTCCCAATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGAGGCAAATTCATCGTTTATTGCTCGTCTTTTCACTCGTGACAATTGAATCCTTCTGTAAATAAGCGAAGTTATAAATACTAAAGGAGCAGATTGAAAGCTTTATTGTTGAAAAATATAATGTAAAGAAATTCTATATAGGCAACTTTGATTGTGAAAATTATACCAATATCATTGAC ATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGA MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPSS Homology
BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.4e-54 Identity = 128/280 (45.71%), Postives = 171/280 (61.07%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q5UPK8 (Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L127 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q969U6 (F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.5e-04 Identity = 23/88 (26.14%), Postives = 41/88 (46.59%), Query Frame = 0
BLAST of Tan0000403 vs. NCBI nr
Match: XP_038874449.1 (F-box protein At5g52880 isoform X1 [Benincasa hispida]) HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145 Identity = 259/289 (89.62%), Postives = 267/289 (92.39%), Query Frame = 0
BLAST of Tan0000403 vs. NCBI nr
Match: XP_022973056.1 (F-box protein At5g52880 isoform X1 [Cucurbita maxima]) HSP 1 Score: 515.8 bits (1327), Expect = 2.5e-142 Identity = 255/289 (88.24%), Postives = 266/289 (92.04%), Query Frame = 0
BLAST of Tan0000403 vs. NCBI nr
Match: XP_022922152.1 (F-box protein At5g52880 isoform X1 [Cucurbita moschata]) HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141 Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0
BLAST of Tan0000403 vs. NCBI nr
Match: KAG7016844.1 (SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141 Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0
BLAST of Tan0000403 vs. NCBI nr
Match: KAG6579359.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141 Identity = 254/287 (88.50%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A6J1I7M6 (F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142 Identity = 255/289 (88.24%), Postives = 266/289 (92.04%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A6J1E2E9 (F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.7e-142 Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136 Identity = 246/288 (85.42%), Postives = 258/288 (89.58%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 8.6e-133 Identity = 239/286 (83.57%), Postives = 255/286 (89.16%), Query Frame = 0
BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A1S3ATY4 (F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116 Identity = 212/253 (83.79%), Postives = 225/253 (88.93%), Query Frame = 0
BLAST of Tan0000403 vs. TAIR 10
Match: AT5G52880.1 (F-box family protein ) HSP 1 Score: 213.4 bits (542), Expect = 2.4e-55 Identity = 128/280 (45.71%), Postives = 171/280 (61.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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