Tan0000403 (gene) Snake gourd v1

Overview
NameTan0000403
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein
LocationLG07: 7750389 .. 7754064 (-)
RNA-Seq ExpressionTan0000403
SyntenyTan0000403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCCTTGTAATTATTCAGCAATCTTCCTTCAATTCGTTGTTCTCTGCTTCATCTTCATTTTTCTGTTTCCAGTTCCATTGCTCTGCTGCTCATTTCGATTCCCAATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAGTGAGTCTTTTGTTTGCTTTCTTTTCTTTTCTTTTCTTTATCTTCATTTTTACATGAAATGATTGATTCGTTTGGTTATTTGTTTTTTGGGTATCTAAAGATTAGAGAAGATTCGGGTCGCTGTAATTCAATTCTTCATGTTTGAATTTAATCAGAAAATGGTATGAATGTTTGATTTGGGAAGCGTTTCATTTCACTTCATCGATTAGAAAAGGTTCTTAAATCCATGGCATCTGACTGGTTGACTGTACATTACTTATTCCATTGTCACATCTGTCGTTTTGTTGTCTTCTGCTTGAGCTTGTCTTGTTAGCTACTTCTATTTGCAACATGTTGCTGTGTTACTGTATTACAATAGTATTCCAGTTTCTTTTGTGGAGAAGAGTGAGCATCTGTCCCCCTATCGATGGAATAGCTTTGCTTTTTAAGGATTAAACCTAATAGTTCTTAAATCCATGTTAATTGAAGACTACCGTAGATTTGTCTATCATAAACCAATTTTCCCATTTAATGGCTTCAGCTACTAAAGAGGATAGGATGCACAATGTAGTTGATTTTTCGTACATATAAGAACGTAATTGAGTACACCTTCGCATTGAAACTGAGTATGACACTACTATTAATCTGTGGCAGCTTCAGATTGTGTGTGCATGTGTATATGTTTTTTTTGTGAATTTTTTCTATTTCCTCTCTCTCATTTGTATTGTATTTACTCCTTCAATGCTTATTACAATATGGGAAGTTTAATATAAAATCAATATGAAATTTTCTGATTAAGGTGTGGTTGATTTAACAAAAGAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTGAATTAGTTGTAAGAATGGTTTAACTTTCTTTCCCTCCCTCCTTTCTCGGGTATTCGCCATGCATACATCAAATTGAACATATTTTGAATTTTCATTTTCAAGTTTTGCTACCAAATTTGATCCCTATCTCACAAATTCTTTTAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTGATTTTTCTGTCCTTTAGGCTTATGTCATTATACATCCTTATCTATCGATAAAGTATGTTATTACCTTACAGATCTGCTATTCAAATATTCAACTTAGTTTACTAGTAATATAAGTTCATGAGCATAGCTATTAGCAATTGCTTCCTCTTAAGATAATGGTTATTATATACTCATTGTGAAGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTGAGAATTGGGATCATTTCTAATTTCTGAACAATATATATATATATATATATATGGTTTTATTGGATTTTCCCTGCCAGTGCTCAATTTAAATTTTAAGAAGGATACTATCTTTGTAACTCGTAATTAGAAATATTATTAGGGTATTAAAGGCATATTAATAAATAGCCCATGGGTTTGTAAGTAGGAGTTGATTATAAAGAGTGAGTAGGAGGAGAGGAGGGTAAACAATTGGTTAGTGGGTTTAGGCTTAAGTGAGAATACTCGAGAAGGAGGTTCAAGTACCTAGGGAGTTATTTTAATCCTTTATCCTTTTATCTTTCAATATTATTCTAGTTATTTGGCCTTTATGACTCTCCTTAATAAAACAGTGTTTTCATTAAGATGGTTTTGAATTTCATAATAATTGTTTGCCAACAAAAGCATAACGCTCAACTGTCATAAGTATGTGTTTATGACCAAGAGGTCATAGGTTCAAATCCCCCCATTATTGTTGAACTCAAATTTCATAATAATTGTTTGTACCATGGCATTTGGAATATTAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTACCTTTTTTCCACTCTATTTTTCCTAAGTTCATTTTCAGGGTCTATTTGGTCAGCTTTTGCTCTTCCACTGTCTTTGTCGATTTACATGAATCAGAATCTTTCTCTCTCTGAACACAAACGTGGTTTACTTTGGACCTCTAGCTGATGAACATTTATAAGACATACAAGCAGAGTAGCTTTCCATTCCCTCTACCTCACTGTAATGGAACTGCTTCTGCTCATTTGAATGGTCACTTTTTGTGAAACTGACTTCTTTTCAGGCTGATTGTAGGATGACCTTTTTTTTTGCTATCGATTCTTTTTAGAGGGGAAAATAACATGTCCATGTTCTTTCAGAAGTATCTATAAAAGATCTTATAGCAGCTTTCAAGGTTTTCAAGAACACTTTTTTTATGTAGGGTTGTAAGTAGGTTGATTAGAGTCATTTTATTGTTCAAAACTCGTTCTGAACAGGCCTATCAAAATTGAAACTAGACGCTGAAACCAGTGTTCTAAAAAACAGAATCGACTATCTGACCACAATCAGCAGAAAAACAACCAGATGATCAAACCAAACTAGCTGGAATACGTTGCTTTTGAATTTTATGAAACTAAACCAACCGACCCTTATTGGTAGACCAATGACACGACACCATCTCGATTCGTTAATTTGTGATTTTTTTTCTTGCGTTCTTCATCTGTGGCTTGCCCCCCTGTTTTTATATATTACCAAATATCATGAAAATTTTAGAATCTTGAAAAGTATTCTCAAGTACATTACATATGTTTTTTCACAACATTATTCCTGGCTGTAGAGTTATTTAAATCCTTTGAACTTGATCATAATGTGTCACCTTCTTTTAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGAGGCAAATTCATCGTTTATTGCTCGTCTTTTCACTCGTGACAATTGAATCCTTCTGTAAATAAGCGAAGTTATAAATACTAAAGGAGCAGATTGAAAGCTTTATTGTTGAAAAATATAATGTAAAGAAATTCTATATAGGCAACTTTGATTGTGAAAATTATACCAATATCATTGAC

mRNA sequence

TTCTCCTTGTAATTATTCAGCAATCTTCCTTCAATTCGTTGTTCTCTGCTTCATCTTCATTTTTCTGTTTCCAGTTCCATTGCTCTGCTGCTCATTTCGATTCCCAATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGAGGCAAATTCATCGTTTATTGCTCGTCTTTTCACTCGTGACAATTGAATCCTTCTGTAAATAAGCGAAGTTATAAATACTAAAGGAGCAGATTGAAAGCTTTATTGTTGAAAAATATAATGTAAAGAAATTCTATATAGGCAACTTTGATTGTGAAAATTATACCAATATCATTGAC

Coding sequence (CDS)

ATGTCGGATCCATTAGAGAGATACCAAAATCTTGCCCTAACAGACTCTCTGGCGAAGAGTTATCGCTACCCATTAGCTTGTAAGGAGCTAAGCTTCATTATCAGAGGCGCTTTCAATAAACTCCCCAAAAATCTCCAATCCCTCATCTACCAACATATTATTACCGCCTTTCATCTCCTTCCGGAAATGCAGACGAGCTCGGCTGTTTCGGCTGCACATCTCCTTGCTCAGGGTGTTGAAGCTGCTTTGCCTAAGCAAAAGAGAAATTCAGCGATTGTAGAATTTAAAAAAGCAATGGTTGCTCATAAGAGGCGTAGTAAAGCACATCAGGAAGAAAAAGGTTCTGTTCAACTGCCTCAAGATGCACTCCTCCACATCTTCTGCTTTCTAGATATCGAATCTTTAGTTTCGGCTGGGCTAGTCTGCTGGTCATGGAATGTAGCAGCAGATGATGAATATCTGTGGCAGTTGCAGTATACAACATTTTTTGGTTGTTCTGATAACATCAGTAAACCCATTAATGATAAAGACGGCATGGATGACTTCACTAGCATGCCTCATGTTGACTGGAAAGAGGCATTCAAGAGAGCATATATAGGTAATTCTTTGAGGAGAAACACATATGGAAGAGGATACTGCAAACACTGTGACACAATAGTTTCCTTTAGTACCTTGAGATGTCCCAATGATCATGGAAGAAATAAAAATAAACAAATCAAGCCTCTGTCAATCAACCAGGTTGTTGAATATGTGTTGAATGGTTCTGCAGAATTGATTTATTCTTCAGATAGTGATACTGATTCAGATGAAGTTGTAATTTCTGAGTTTTGGGCTCTTCCAAAGTATTTTGGCCGAAGGCACCCAAGTTCCTGA

Protein sequence

MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPSS
Homology
BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q9FLX3 (F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.4e-54
Identity = 128/280 (45.71%), Postives = 171/280 (61.07%), Query Frame = 0

Query: 5   LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQNL + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSV-QLPQDAL 124
           TS+AVSAA+LL + VEA LPKQK+N AIVEFK+A VA KRRSK  +EE   +  LPQD L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFT 184
           +HIF FL+I SLVS+  V  SWN A  +  LWQ Q+   F     I              
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHFNHKVLI-------------R 180

Query: 185 SMPHVDWKEAFKRAYI-GNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIK 244
               +DW+EAFK+AYI  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 MQSDIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL 280
            ++ +QVV Y+L      I SSD +++S DE      W L
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKL 262

BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q5UPK8 (Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L127 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 0

Query: 118 LPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPI 174
           L ++ + HIFCFLD+ S +    VC  W   +DDE LW L Y  FFG +  I + I
Sbjct: 5   LSEEMVYHIFCFLDLSSFIKCSRVCRKWRRISDDEKLWNL-YGEFFGTNKPIDQYI 59

BLAST of Tan0000403 vs. ExPASy Swiss-Prot
Match: Q969U6 (F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.5e-04
Identity = 23/88 (26.14%), Postives = 41/88 (46.59%), Query Frame = 0

Query: 111 EEKGSVQLPQDALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNIS 170
           +E G+  LP   +  IF  L    +++AGLVC  W   + DE+LW+ Q+  ++  + ++ 
Sbjct: 2   DEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVARDVP 61

Query: 171 KPINDKDGMDDFTSMPHVDWKEAFKRAY 199
           +                + W E F+R Y
Sbjct: 62  R------------HPAAMSWYEEFQRLY 77

BLAST of Tan0000403 vs. NCBI nr
Match: XP_038874449.1 (F-box protein At5g52880 isoform X1 [Benincasa hispida])

HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145
Identity = 259/289 (89.62%), Postives = 267/289 (92.39%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MSDPLERYQNLALTDSLAKSY YPLACKELSF+IRGAFNKLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSDPLERYQNLALTDSLAKSYSYPLACKELSFLIRGAFNKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSA SAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSAQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLD++SLVSAGLVC SWNVAADDEYLWQLQYT FFGCSD+ SKPINDKD +D
Sbjct: 121 DVLLHIFRFLDVQSLVSAGLVCRSWNVAADDEYLWQLQYTKFFGCSDDNSKPINDKDSVD 180

Query: 181 DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
           DF S  HVDWKE FK AYI NSLRRNT GRGYC+HCDTIVS STLRCPNDHGRNKNKQIK
Sbjct: 181 DFASARHVDWKEEFKSAYIVNSLRRNTNGRGYCRHCDTIVSSSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
           PLSINQVVEYVLNGS ELIYSSDS+TDSDEVVISEFWA PKY G R P+
Sbjct: 241 PLSINQVVEYVLNGSTELIYSSDSETDSDEVVISEFWAFPKYLGSRRPN 289

BLAST of Tan0000403 vs. NCBI nr
Match: XP_022973056.1 (F-box protein At5g52880 isoform X1 [Cucurbita maxima])

HSP 1 Score: 515.8 bits (1327), Expect = 2.5e-142
Identity = 255/289 (88.24%), Postives = 266/289 (92.04%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLDIESLVSAGLVC SW+ AADDEYLWQ QYTTFFGCSD   +PIND+D +D
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSD---EPINDEDSVD 180

Query: 181 DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
              S PHVDWKEAFKRAY+GNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+QIK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
           PLSINQVVEYVLNG +ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

BLAST of Tan0000403 vs. NCBI nr
Match: XP_022922152.1 (F-box protein At5g52880 isoform X1 [Cucurbita moschata])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 180

Query: 181 DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
              S PHVDWKEAFK AY+GNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
           PLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

BLAST of Tan0000403 vs. NCBI nr
Match: KAG7016844.1 (SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0

Query: 1    MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
            M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 825  MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 884

Query: 61   PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
            PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQ
Sbjct: 885  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 944

Query: 121  DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
            D LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D
Sbjct: 945  DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 1004

Query: 181  DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
               S PHVDWKEAFK AY+GNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 1005 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 1064

Query: 241  PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
            PLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 1065 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 1110

BLAST of Tan0000403 vs. NCBI nr
Match: KAG6579359.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141
Identity = 254/287 (88.50%), Postives = 262/287 (91.29%), Query Frame = 0

Query: 3    DPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPE 62
            DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLLPE
Sbjct: 794  DPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLLPE 853

Query: 63   MQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQDA 122
            MQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQD 
Sbjct: 854  MQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQDV 913

Query: 123  LLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDF 182
            LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D  
Sbjct: 914  LLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVDGL 973

Query: 183  TSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPL 242
             S PHVDWKEAFK AY+GNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPL
Sbjct: 974  ASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIKPL 1033

Query: 243  SINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
            SINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 1034 SINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 1077

BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A6J1I7M6 (F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 255/289 (88.24%), Postives = 266/289 (92.04%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLDIESLVSAGLVC SW+ AADDEYLWQ QYTTFFGCSD   +PIND+D +D
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWSAAADDEYLWQFQYTTFFGCSD---EPINDEDSVD 180

Query: 181 DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
              S PHVDWKEAFKRAY+GNSL RN YGRGYCKHCDTIVSFSTLRCPNDHGRNKN+QIK
Sbjct: 181 GLASTPHVDWKEAFKRAYVGNSLWRNRYGRGYCKHCDTIVSFSTLRCPNDHGRNKNRQIK 240

Query: 241 PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
           PLSINQVVEYVLNG +ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 241 PLSINQVVEYVLNGISELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A6J1E2E9 (F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.7e-142
Identity = 255/289 (88.24%), Postives = 264/289 (91.35%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           M+DPLERYQNLALTDSLAKSY YPLACKELSFI RGAFNKLPKNLQSLI+QHIITAFHLL
Sbjct: 1   MTDPLERYQNLALTDSLAKSYSYPLACKELSFITRGAFNKLPKNLQSLIFQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSAVSAAHLLAQGVEA+LPKQKRNSAIVEFKKAMVAHKRRSKA QE KGS QLPQ
Sbjct: 61  PEMQTSSAVSAAHLLAQGVEASLPKQKRNSAIVEFKKAMVAHKRRSKARQEVKGSSQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLDIESLVSAGLVC SWN AADDEYLWQ QYTTFFGCSD   +PINDKD +D
Sbjct: 121 DVLLHIFRFLDIESLVSAGLVCRSWNAAADDEYLWQFQYTTFFGCSD---EPINDKDSVD 180

Query: 181 DFTSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240
              S PHVDWKEAFK AY+GNSL RN  GRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK
Sbjct: 181 GLASTPHVDWKEAFKGAYVGNSLWRNRSGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQIK 240

Query: 241 PLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRRHPS 290
           PLSINQVVEYVL G++ELIYSSDSDTDSDEVVISEFWALPKY GRR P+
Sbjct: 241 PLSINQVVEYVLTGTSELIYSSDSDTDSDEVVISEFWALPKYLGRRRPN 286

BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A1S3AUV1 (F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136
Identity = 246/288 (85.42%), Postives = 258/288 (89.58%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY  L+L DSL KSY YPLACKELSF+IRGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSA SAA LLAQ VEAALPKQKRNS IVE+KKAMV HKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLD++SL SAGLVC SWNVAADDEYLWQLQYTTFFGC D+ SKPINDKD  D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DF--TSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQ 240
           DF  +S PHVDWKE FK+AY+GNSL RNT GRGYCKHCDTIVSFSTLRC NDHGRNKNKQ
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFGRR 287
           IKPLSINQVVEYVLNGS+ELIYSSDS+TDSDE VISEFWALPKY G R
Sbjct: 241 IKPLSINQVVEYVLNGSSELIYSSDSETDSDEDVISEFWALPKYLGSR 288

BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A0A0KNE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 8.6e-133
Identity = 239/286 (83.57%), Postives = 255/286 (89.16%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY  L L D LAKSY YPLACKELSF+IRGAF KLPKNLQSLIY+HIITAFHLL
Sbjct: 1   MSNPLERYHKLCLMDFLAKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYEHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSA SAA LLA+ VEAALPKQKRNS IVEFKKAMV HKRR+KAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLARAVEAALPKQKRNSVIVEFKKAMVVHKRRTKAHQEEKGSCQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF F+D++SLVSAGLVC SWNVAA+DEYLWQLQYTTFF CSD+ SK INDKD  D
Sbjct: 121 DVLLHIFRFIDVQSLVSAGLVCRSWNVAAEDEYLWQLQYTTFFVCSDDNSKSINDKDSED 180

Query: 181 DF--TSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQ 240
            F  +S P VDWKE FK+AY+GNSL RNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKN Q
Sbjct: 181 GFASSSTPRVDWKEEFKKAYVGNSLGRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNTQ 240

Query: 241 IKPLSINQVVEYVLNGSAELIYSSDSDTDSDEVVISEFWALPKYFG 285
           IKPLSINQVVEYVLNG++ELIYSSDS+TDSDE VISEFWALPKY G
Sbjct: 241 IKPLSINQVVEYVLNGASELIYSSDSETDSDEDVISEFWALPKYLG 286

BLAST of Tan0000403 vs. ExPASy TrEMBL
Match: A0A1S3ATY4 (F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 212/253 (83.79%), Postives = 225/253 (88.93%), Query Frame = 0

Query: 1   MSDPLERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLL 60
           MS+PLERY  L+L DSL KSY YPLACKELSF+IRGAF KLPKNLQSLIYQHIITAFHLL
Sbjct: 1   MSNPLERYHKLSLIDSLGKSYSYPLACKELSFLIRGAFIKLPKNLQSLIYQHIITAFHLL 60

Query: 61  PEMQTSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSVQLPQ 120
           PEMQTSSA SAA LLAQ VEAALPKQKRNS IVE+KKAMV HKRRSKAHQEEKGS QLPQ
Sbjct: 61  PEMQTSSAASAARLLAQAVEAALPKQKRNSVIVEYKKAMVVHKRRSKAHQEEKGSCQLPQ 120

Query: 121 DALLHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMD 180
           D LLHIF FLD++SL SAGLVC SWNVAADDEYLWQLQYTTFFGC D+ SKPINDKD  D
Sbjct: 121 DVLLHIFRFLDVQSLGSAGLVCRSWNVAADDEYLWQLQYTTFFGCPDDNSKPINDKDSED 180

Query: 181 DF--TSMPHVDWKEAFKRAYIGNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNKNKQ 240
           DF  +S PHVDWKE FK+AY+GNSL RNT GRGYCKHCDTIVSFSTLRC NDHGRNKNKQ
Sbjct: 181 DFASSSTPHVDWKEEFKKAYVGNSLGRNTCGRGYCKHCDTIVSFSTLRCTNDHGRNKNKQ 240

Query: 241 IKPLSINQVVEYV 252
           IKPLSINQ+V+ +
Sbjct: 241 IKPLSINQIVKLI 253

BLAST of Tan0000403 vs. TAIR 10
Match: AT5G52880.1 (F-box family protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-55
Identity = 128/280 (45.71%), Postives = 171/280 (61.07%), Query Frame = 0

Query: 5   LERYQNLALTDSLAKSYRYPLACKELSFIIRGAFNKLPKNLQSLIYQHIITAFHLLPEMQ 64
           ++RYQNL + ++ +K+  YP AC ELS I+  A++  PKN+++LI+Q  ++AF LLP++ 
Sbjct: 1   MKRYQNLKVGEAFSKNRIYPFACNELSSILNLAYSLSPKNVKALIFQDTLSAFRLLPDIN 60

Query: 65  TSSAVSAAHLLAQGVEAALPKQKRNSAIVEFKKAMVAHKRRSKAHQEEKGSV-QLPQDAL 124
           TS+AVSAA+LL + VEA LPKQK+N AIVEFK+A VA KRRSK  +EE   +  LPQD L
Sbjct: 61  TSAAVSAANLLLKSVEAVLPKQKKNLAIVEFKQAKVALKRRSKNREEEDIDIPSLPQDIL 120

Query: 125 LHIFCFLDIESLVSAGLVCWSWNVAADDEYLWQLQYTTFFGCSDNISKPINDKDGMDDFT 184
           +HIF FL+I SLVS+  V  SWN A  +  LWQ Q+   F     I              
Sbjct: 121 IHIFSFLEISSLVSSAQVSRSWNQATHENSLWQSQFDLHFNHKVLI-------------R 180

Query: 185 SMPHVDWKEAFKRAYI-GNSLRRNTYGRGYCKHCDTIVSFSTLRCPNDHGRNK--NKQIK 244
               +DW+EAFK+AYI  NS      GRGYC +CD+IV    LRC N   R K  NK + 
Sbjct: 181 MQSDIDWREAFKKAYIAANSSEALRSGRGYCSYCDSIVWHENLRCLNKQCRLKSGNKPLD 240

Query: 245 PLSINQVVEYVLNGSAELIYSSDSDTDS-DEVVISEFWAL 280
            ++ +QVV Y+L      I SSD +++S DE      W L
Sbjct: 241 LITTHQVVNYLLG-----IESSDDESESDDEAFPGRLWKL 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FLX33.4e-5445.71F-box protein At5g52880 OS=Arabidopsis thaliana OX=3702 GN=At5g52880 PE=2 SV=1[more]
Q5UPK81.3e-0542.86Putative F-box protein L127 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIM... [more]
Q969U69.5e-0426.14F-box/WD repeat-containing protein 5 OS=Homo sapiens OX=9606 GN=FBXW5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_038874449.11.8e-14589.62F-box protein At5g52880 isoform X1 [Benincasa hispida][more]
XP_022973056.12.5e-14288.24F-box protein At5g52880 isoform X1 [Cucurbita maxima][more]
XP_022922152.11.6e-14188.24F-box protein At5g52880 isoform X1 [Cucurbita moschata][more]
KAG7016844.11.6e-14188.24SPCC24B10.10c [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6579359.17.9e-14188.50F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
A0A6J1I7M61.2e-14288.24F-box protein At5g52880 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471558 P... [more]
A0A6J1E2E97.7e-14288.24F-box protein At5g52880 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430216... [more]
A0A1S3AUV11.7e-13685.42F-box protein At5g52880 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ... [more]
A0A0A0KNE58.6e-13383.57F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139890 PE=4 ... [more]
A0A1S3ATY41.1e-11683.79F-box protein At5g52880 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482926 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G52880.12.4e-5545.71F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 118..158
e-value: 3.2E-6
score: 36.7
IPR001810F-box domainPFAMPF12937F-box-likecoord: 117..159
e-value: 1.7E-10
score: 40.6
IPR001810F-box domainPROSITEPS50181FBOXcoord: 112..158
score: 9.629941
NoneNo IPR availableGENE3D1.20.1280.50coord: 100..206
e-value: 3.1E-13
score: 51.4
NoneNo IPR availablePANTHERPTHR47744OS05G0526300 PROTEINcoord: 1..247
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 116..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000403.1Tan0000403.1mRNA
Tan0000403.2Tan0000403.2mRNA
Tan0000403.3Tan0000403.3mRNA
Tan0000403.4Tan0000403.4mRNA
Tan0000403.5Tan0000403.5mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding