Tan0000395 (gene) Snake gourd v1

Overview


Name	Tan0000395
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box/kelch-repeat protein SKIP4-like
Location	LG10: 2038429 .. 2044433 (+)
RNA-Seq Expression	Tan0000395
Synteny	Tan0000395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGAAATTGTAGATTAAAAGGGGGAAAAAAAAAACCCTTAAAACCTTTATATGTTGTAAAAGTAGTTGCATCACTTATTAATAATAGTAAATTATTGAGAAGTGTCTTTTTTCCTCATTTTCTTGGATTTAGTAGTTATTATAGTTGGATTGTGATATCCGGGCAGATGCTAACATTGTTAAGAGCAATTGGTAGTTGATACTTTAGTTTTACCACTTTTAAGCATTTCAACTTTCAAATTGATCACTACTAACAAGAAGTTTTGTGGATCAAAGTATAAAGTAGTAGCCTAATTTAGGTTAGATTGAAAAATGGTCGATAGACTACTTTAGTGGCATGCTGCTCTACTCTAACTTAGCATGACATCCTAACAAATCATAGTTGAAGCTCTACCTACCAAAATTTTGTTCAGCTCAAGATGGGCTAATTTTTTTAAATTTTTTTTTAGTACAATTGGAATTGGATTATTCAAACTACTGATCTCTTTGAGCTAACTTAAACATCCAATGATGTTTGATAAATATCACAATTTATATGGGTACTTAATACCTCTTGGTTTTACAAGTACCCTCCAACTATATACAATTAACATTACATTTTCAATCATGGTGACGTAAGGTGAATCAACTATATACAATTTATGTCTTGAAGTGAATAAGTGATGGTGATATTCTCCATTTTAGAGAGAAATGAAAAGATCAATATTATTAGGTTAGATTGAAATTGTAATTTAATGCGAAAGTGAATATAATAATCGACATGTACCCTCAATCTTTATTAGGTCTCGTTTGTTAACCATTTGATTTTTGGTTTTTAAAAATTAAGTTTGTTTTCTTACCATTTCTCTACAATTTATTTTCTCTATAATGGTTTACATCTTTCTTAAGAAAAGATTTTAGTTTCCAACCAAATTTCAAAAACGAAAACAAGTTTTTGAAAACTTTTTTTTTTTTTAGTTTTCGAGACTTGGCTTGATTTTTGAAAATATAGGGCCTCAGAAATTCGAATTCAAATTCCTTACTCTAAATGCCATTGAACTTTAAAAAAAGTGTTTGAACTAAAAAAAAGAAGAAGAAAAGAGTAATTTAACTTAATTGTTCTTATTATTATTTGGAGAGTTGTAATGGGTGGCAAAAAATATCAGTATATTTACAAATCTAGCCATGATTTTTTAGATTCGCAAACATAACAAATTTTTTGAAAATCTGATTTTTTTCATTATTCTAATTTTACCCTCATTGATATATCAATATTATATCTAGGGGTGAGCATCGGTCGGTCGGTCGGTCGGTTTTCGACCTGAATCGATTTCTCGAACCGACTCAAGGCGGCTACTTGCGGTTAGTTTTTTTTTTTTTTTAAATCCTTACCAAAATCGACCACCGTCCCAATTCCTTCGATCGATCAGTTTAGTTTGGTTTATATATATATATATAAATATTTATTTAATTAAATATTAAATATTTATAATTATTATTTTATAATTATTTAATAATTTATAATTATTTTTTAATTATTTTGAGAAATTTTTTAGTTTTTTAGTTTTTTAATTATTATTATTATTATTATTAATTTATTATCATTATTATATATATATATATTTTTTTTTTTTTAATTTTCTGGTCGGTTGCCTCGTTTTGTGAAGGGTAAAACCAATTCTCGATCCGACTCTTCATAAAACCGACCGATCGCCCTCGATTCGATCGGTTTCGGTCGGTCGTGTCGGTTTTCGGATCTTTTTTGCTCACCCCTAATTATATCTAATATATTTTATATTTGGTATATCGATAGTATATCTGATATAATTTACATTTAATATATCGGTAATATATCATATCAGTAAATTGATATATATCTAAAACAAAATACATTAGTAGTACATTATTAATACACTATGGATACACTTCTTAATTGATATATTCACAACATATCAAATATATTTTGTATTTTGGTATATTACTGATATACTTCATTTTAGATATGTTCATTTCACTAATATACCTAACATTGAGTATATCAGTGAAATGAACACTATCATATGCGAGTTACCACCATTGAGTATATCACTATTTTTATCACTATTATATTTTTGATATATAATAGTGATAAAAAATATATTAGTAGTAGATCAATGGCATACTCTACATTAGGTATATTGTTGGTTTATCAACATTATACTATTGGTTGACTATTGAAATTTTTTTATTGAATAACACCTGCGATAAATCAAGTATATCATTATTGCACTGACAGATATACTCTAGATTAACTTTAAATTAAGAACATCAATAGTATATCATATAGTTACTTTTTAGTTAGGTATAATGTTAATATATCAGATCTATCGTTAGTATATCAACAGACATTTTTGACTTTCTGATGCATGTGGTTGGGTTGAGCCTATAAAATTTGCTATTTTTGTAAATTAGTAAATGACATACTTGCAATTCTCATAATTTAAAATGTTTTTTTATCCAAATCAGCCTTATTATTTTAGGCCCCGTTTGATAATTATTTTGTTTTTAGTTTTTGGTTTTTGAAAATTAAGGTTATTTTCACCTAATTTCTCTATAATAGAGATCATCGCCCACAAGAAAGCACTTGCATTCTTAACCAAATTCTAAAAACAAAATCAAGTTTTTTAAAGCTGTTTTTTTAGTTTTCAAAAGTTAGCTGGATTATTGAAAACATAAGTTTAAAATAGATAAGAAAACATATGAACCCATTGGTAGAAGTAATATTTTTAGGCTTAAATTTCAAAAATTAAAAATAAAAAACTAAATGATTATCAAACGGGGTTTTAATTTTTTTCATTTATCGATTCGTCTCTCTTCGAGGCCCGAACCCATACTAAGAGGCCTCAACAGAAGGATTAATGACAATTCTACCCCCACACGTAGCTTTGGCTTTGCGTGCTTCCGTCTGATATCCTCTCCCGAGCTCCTTCCGTTGTTGCCATCAGATCCATCCCTTAGTTTTTCACATCAATTTCTCCGGTGAGTTCGATATATTCGCTTTCGTTTAAGATTTTGATTCGACCTCTTTTCTTGGTTTGTTATCTTTCAATGCCTTCAGTGCTTGATTTGTTTGTTAATCTCGGTGAGCCGGATAATTCTCCTTCTGTATGTACAATGCTGGTTGTGTTTGAGATCAAATTACGGTTTCAATCGATTCTGTTTGATCTCTTTGGTTCTTATGGATTTGTTGGAATTAAAGATCAGATGGTTGCCAGTACTAATTTCTAGATAGATTTATGATAGCTTCAGGTTCAAGAATAAATCAGGGAACAAGAAATAGCAAAATTAAACTATAATTACTTGTTTCCGAAAGACTGTTTTGAAAACTATGTTTTGAATTTGCTTCCGAAATTGTTTTAAGAACTATGTTTCAATTTGCTTGTAAATGTACACTTTAATTTTCCATAAAAGTAAACTGAAAAATGGTTAAATATGTTTAAAATTGGTTCTTTAAAGTTATACTCACTGAACATCTGTTCTTAAAAACAAGTTTCCTCAAGCAGTTTCTTTTACTTATTTATTTTTTCCCAAACATGTTCAAGATGGGTTTCTAGGTAAGTGGACAGGGTCACTGGGTGTAGTTTCTGAACAATTTGGGTGCATTTGATAAACTTCAAAGGAATGCTTGAAGATGCTTTACTTTATCTAGCACGATAACTTCAGTTTATGATGTTATTAACTGAAATGATCGACCTCACTTCATTGATCTGGTTGAGAGCGCAGGCTGCTGCTGAAAAAGTTGTGGCTGAAACATTCTACTTCTTTTTTTTTAATGAGAGGCGAGTATTTAATTTCATTGATAGTATGAAATGTACGAAAGAGGGGATAAGAGAGTCCCAAATTACATCAGGCTTTGTCAATTAGTTAGAAGGGAACTAGGACCAGAATCGCAAAAGTGTTGAGTGAATTTACACCAAGAGAAGGATGTAAAGCAGACGATCAAAGAAAGCTTTGAAATCTTGTGACTTGTCCTCAAAGATGCAATAGCTTCTCTCAATCCTAATGGACCAAAAGAAAGATTTGATGATGAATTCCCACAAACATGCCTTTCTTTTGCTAAATGTATGACCCAAGATGAGAGCATGGGTCATCTTGGGCATTTGAATTGAATAGATAAAATAATTATATAAGTTATGCCTAGTTGGCAAAAGTGATCAGAACATGGGTCTTAATAGGTGATTAGATTTGAAATTCTGAAAGGTGAAACTGTTCTGGATGTTTTGAACTTTTTGGTGGTGGTAAGGTTATGATTTCCGATTTTTTTGACAGATTGATAGACTTACTGATTTTGTGGCTTGAAAATTGAAATAGCTTGTGGTGGTTATCATGCTTTGTTTAGCTGAAGGAATATAAAGAGTACTTTTCTGAGTTCTTTAGATTTAATTGATGCAGCATTTCTGAGCAGTACAGACTCTCTGACTTTCCAGGAGTTTTAATGGCTTAAACTTCTCAATCGGGCATATGGACAGTGCTTTAGGTTCAAATTGTCTTGAAGAACTGATCCAACCGCCCGGGCGATCTCTGATTCCTGGGCTGCCAGATGACATTGCTCTTTCCATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATGCGTCTCAAAAAGATGGAAGGATCTGGTGAGCAGCGAAGAGTGGTATTCATGCCGTGAAAAAAACAATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAGGTTTCATGTTATGTGTTGGATCTTAACTCATCAAAAAGGTGTTGGAAACAGATGAAAAGTTTACCAACTTGCAGCTTTAAGAGGAAGGGTATGGGTTTTGAAGCAATGGGGAGGAAGCTCTACATATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGGTGAAGTGTACTGCTACGATACTTCGAAAAACAGTTGGAGTAAAGCTGCGCCATTGTCATCTGCAAGGTAATAATTATACATATACCAAAAAAGAATATATATTCAGAATTGTGACGACCTCAAAATTTTCATGTGGCAGCAATTTGCTTATTCTGATCTTTTTTGGTTTATTAGTTGCATCTTCACAATGAAGTTGTAACATATTTGCCTATGCACGATTTTCTTCAGTTACCTTAATGCTTGTATCTTCATCATCGTCTTTTGTGAAAGTACTAGTATGAGATATGTGGGAAGAGATTAGTGAAATAGTAGTAAGGGCATAGTGGTAATTAGTTAGGGGTGATAAATAAGGAGGGTTAGAGATCTTAGAGAGGATCATTTTAGTGAATTAGTCCATTGTAGGATTGAGAGATTATCCTTTCGAAAGGCTATTGTTATATTGTAATTGTCTTTGATATTACAATATATTACTATCTTGTGTTTTATGCATTTGGATTCCTTTTGCATTTAGGTGTTACTTTGCATGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGGTTATGTTCGACTTCAGGTGATCGACATTCTTGGGACGTATATGACCCATGCACCAACACATGGGAATCTCACTTGGATACTACAAAAATTCAGAATGAAATTGAGGGTAGTATGGTGATGGATGGAAAGATTTATATTCGTCTTCGTTCTGTGGATTCTCAAGCTTATGCTCTGGTTTATGACCCAACAAGCGGGATGTGGCAGCACAGTGACTCCAAAATGGTTTCAGGATGGCGAGGTCCAGCAGTTATTGTAGACGAAACCCTCTATGTCTTGGATCAAAGTTCTGGAACAAGATTGATGATGTGGAACACTGAATTCAAGGAATGGATTCCTGTGGGGAGGTTTTCTGCCCTTCTAACGAGACCACCATGTCAACTCGTTGCTGTTGGCAGAAGAATCGTCGTTGTCGGTAAGGGACTCAGCAGTGTCATCTTTGATGTTAGCAATGCAAGGACTATGGAGGGGTTGATGGTGAGTTCCTCTATACCTAGACTAGATTCTGATGTTGATGTACTTGCCTGTAAATGTATAACAATTTGA

mRNA sequence

ATGGTAAGAAATTGTAGATTAAAAGGGGGAAAAAAAAAACCCTTAAAACCTTTATATGTTGTAAAATTGGATTGTGATATCCGGGCAGATGCTAACATTGTTAAGAGCAATTGGCCCGAACCCATACTAAGAGGCCTCAACAGAAGGATTAATGACAATTCTACCCCCACACGTAGCTTTGGCTTTGCGTGCTTCCGTCTGATATCCTCTCCCGAGCTCCTTCCGTTGTTGCCATCAGATCCATCCCTTAGTTTTTCACATCAATTTCTCCGGAGTTTTAATGGCTTAAACTTCTCAATCGGGCATATGGACAGTGCTTTAGGTTCAAATTGTCTTGAAGAACTGATCCAACCGCCCGGGCGATCTCTGATTCCTGGGCTGCCAGATGACATTGCTCTTTCCATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATGCGTCTCAAAAAGATGGAAGGATCTGGTGAGCAGCGAAGAGTGGTATTCATGCCGTGAAAAAAACAATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAGGTTTCATGTTATGTGTTGGATCTTAACTCATCAAAAAGGTGTTGGAAACAGATGAAAAGTTTACCAACTTGCAGCTTTAAGAGGAAGGGTATGGGTTTTGAAGCAATGGGGAGGAAGCTCTACATATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGGTGAAGTGTACTGCTACGATACTTCGAAAAACAGTTGGAGTAAAGCTGCGCCATTGTCATCTGCAAGGTGTTACTTTGCATGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGGTTATGTTCGACTTCAGGTGATCGACATTCTTGGGACGTATATGACCCATGCACCAACACATGGGAATCTCACTTGGATACTACAAAAATTCAGAATGAAATTGAGGGTAGTATGGTGATGGATGGAAAGATTTATATTCGTCTTCGTTCTGTGGATTCTCAAGCTTATGCTCTGGTTTATGACCCAACAAGCGGGATGTGGCAGCACAGTGACTCCAAAATGGTTTCAGGATGGCGAGGTCCAGCAGTTATTGTAGACGAAACCCTCTATGTCTTGGATCAAAGTTCTGGAACAAGATTGATGATGTGGAACACTGAATTCAAGGAATGGATTCCTGTGGGGAGGTTTTCTGCCCTTCTAACGAGACCACCATGTCAACTCGTTGCTGTTGGCAGAAGAATCGTCGTTGTCGGTAAGGGACTCAGCAGTGTCATCTTTGATGTTAGCAATGCAAGGACTATGGAGGGGTTGATGGTGAGTTCCTCTATACCTAGACTAGATTCTGATGTTGATGTACTTGCCTGTAAATGTATAACAATTTGA

Coding sequence (CDS)

ATGGTAAGAAATTGTAGATTAAAAGGGGGAAAAAAAAAACCCTTAAAACCTTTATATGTTGTAAAATTGGATTGTGATATCCGGGCAGATGCTAACATTGTTAAGAGCAATTGGCCCGAACCCATACTAAGAGGCCTCAACAGAAGGATTAATGACAATTCTACCCCCACACGTAGCTTTGGCTTTGCGTGCTTCCGTCTGATATCCTCTCCCGAGCTCCTTCCGTTGTTGCCATCAGATCCATCCCTTAGTTTTTCACATCAATTTCTCCGGAGTTTTAATGGCTTAAACTTCTCAATCGGGCATATGGACAGTGCTTTAGGTTCAAATTGTCTTGAAGAACTGATCCAACCGCCCGGGCGATCTCTGATTCCTGGGCTGCCAGATGACATTGCTCTTTCCATCCTCTCAAGGGTTCCTCGAAAATACCATCATAATCTGAAATGCGTCTCAAAAAGATGGAAGGATCTGGTGAGCAGCGAAGAGTGGTATTCATGCCGTGAAAAAAACAATCTTGCTGAGACTTGGATCTATGCTTTGTGTAGAGACAAGTCTGAACAGGTTTCATGTTATGTGTTGGATCTTAACTCATCAAAAAGGTGTTGGAAACAGATGAAAAGTTTACCAACTTGCAGCTTTAAGAGGAAGGGTATGGGTTTTGAAGCAATGGGGAGGAAGCTCTACATATTAGGTGGTTGCAGTTGGTCTGAAGATGCTACTGGTGAAGTGTACTGCTACGATACTTCGAAAAACAGTTGGAGTAAAGCTGCGCCATTGTCATCTGCAAGGTGTTACTTTGCATGTGAAGTCTTAAATGAAAAGCTTTATGCCATTGGGGGGTTATGTTCGACTTCAGGTGATCGACATTCTTGGGACGTATATGACCCATGCACCAACACATGGGAATCTCACTTGGATACTACAAAAATTCAGAATGAAATTGAGGGTAGTATGGTGATGGATGGAAAGATTTATATTCGTCTTCGTTCTGTGGATTCTCAAGCTTATGCTCTGGTTTATGACCCAACAAGCGGGATGTGGCAGCACAGTGACTCCAAAATGGTTTCAGGATGGCGAGGTCCAGCAGTTATTGTAGACGAAACCCTCTATGTCTTGGATCAAAGTTCTGGAACAAGATTGATGATGTGGAACACTGAATTCAAGGAATGGATTCCTGTGGGGAGGTTTTCTGCCCTTCTAACGAGACCACCATGTCAACTCGTTGCTGTTGGCAGAAGAATCGTCGTTGTCGGTAAGGGACTCAGCAGTGTCATCTTTGATGTTAGCAATGCAAGGACTATGGAGGGGTTGATGGTGAGTTCCTCTATACCTAGACTAGATTCTGATGTTGATGTACTTGCCTGTAAATGTATAACAATTTGA

Protein sequence

MVRNCRLKGGKKKPLKPLYVVKLDCDIRADANIVKSNWPEPILRGLNRRINDNSTPTRSFGFACFRLISSPELLPLLPSDPSLSFSHQFLRSFNGLNFSIGHMDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAMGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLCSTSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPTSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTRPPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI

Homology

[Close]

BLAST of Tan0000395 vs. ExPASy Swiss-Prot
Match: Q9M2C9 (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana OX=3702 GN=SKIP4 PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.0e-92
Identity = 176/360 (48.89%), Postives = 237/360 (65.83%), Query Frame = 0


Query: 111 CLEELIQPPGRS------LIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWY 170
           C+ E  Q  G+S      LI G+PDDI+ S L+RVPR+YH  +KCVS+RW+D V S+E  
Sbjct: 3   CIVEDPQRAGQSNETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMC 62

Query: 171 SCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAMG 230
             R + NLAE+WIYALCRD S  V  ++L+  SS+R WK++   P     R+GMGF  +G
Sbjct: 63  DYRNEFNLAESWIYALCRDISGGVFLHMLNPFSSRRSWKRINDYPYIPM-REGMGFAVLG 122

Query: 231 RKLYILGGCSWSEDATGEVYCYDTSKNSW-SKAAPLSSARCYFACEVLNEKLYAIGGLCS 290
           ++L++LGGC W EDAT E+YCYD + N+W     PLS+ RCYFACE L+ K+ AIGGL  
Sbjct: 123 KRLFVLGGCGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGL 182

Query: 291 TSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPT 350
               + +WD+YDP T T +S  D   I  E+E S VMDG+IYIR   V   + A VY  +
Sbjct: 183 NPNAKRTWDIYDPLTRTCKSCSD-VNIVPEMEDSFVMDGRIYIR-GGVGGSSTA-VYSAS 242

Query: 351 SGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTRP 410
           SG+W+  D  M SGWRGPAV+V   LYVLDQ+ G +L MW  + + WI +G+ S L+ + 
Sbjct: 243 SGIWERMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMWIHIGKLSQLVMKQ 302

Query: 411 PCQLVAVGRRIVVVGKGLSSVIFDVSNAR--TMEGLMVSSSIPRL-DSDVDVLACKCITI 461
           PC+LV++G  I V+GK  S+V+ DV N R   M G+MV SSIP+  D D+DV++CK + I
Sbjct: 303 PCRLVSIGNSIFVIGKDCSTVVIDVENVRKNKMNGVMVCSSIPKTWDDDIDVISCKSVAI 358

[Close]

BLAST of Tan0000395 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-35
Identity = 98/321 (30.53%), Postives = 147/321 (45.79%), Query Frame = 0


Query: 116 IQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWYSCREKNNLAET 175
           IQPP   L+PGLPDD+A++ L RVPR  H  L+ V KRW  L S   +YS R+   ++E 
Sbjct: 74  IQPP---LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEE 133

Query: 176 WIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAM-GRKLYILGGCS 235
           W+Y   RD+  ++S    D  S  + W+ +  +P    +  G G   + G  LY+ GG  
Sbjct: 134 WVYVFKRDRDGKISWNTFDPIS--QLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKD 193

Query: 236 WSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC-STSGDRHSWDV 295
               +   V  Y+   N W +A  +   R +F C V+N  LY  GG C        S +V
Sbjct: 194 PLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 253

Query: 296 YDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPTSGMWQHSDSK 355
           YDP  N W    D +     + G +V D K +++         +  YDP    W      
Sbjct: 254 YDPNKNRWSFIADMSTAMVPLIG-VVYDKKWFLKGLGSHQLVMSEAYDPEVNSWSPVSDG 313

Query: 356 MVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALL----TRPPCQLVA 415
           MV+GWR P   ++  LY LD   G +L +++     W       A L    +     LV 
Sbjct: 314 MVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVP 373

Query: 416 VGRRIVVVGKGLSSVIFDVSN 431
           +  ++ ++   +S  + DVSN
Sbjct: 374 LHNKLCIIRNNMSMSLVDVSN 388

[Close]

BLAST of Tan0000395 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.3e-26
Identity = 93/308 (30.19%), Postives = 151/308 (49.03%), Query Frame = 0


Query: 94  NGLNFSIGHMDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKR 153
           +G+ FS G++D  LGS   E  +  P   LIPGLPDD+A   L+ VPR    ++  V K+
Sbjct: 15  HGMCFSKGNLD--LGSRLSENFMDDP---LIPGLPDDVAKQCLALVPRARFPSMGSVCKK 74

Query: 154 WKDLVSSEEWYSCREKNNLAETWIYALCRDKSEQVSCY-VLDLNSSKRCWKQMKSLPTCS 213
           W+ +V S+E+ + R    + E W+Y L  +   + + + V+D    K     + SLP   
Sbjct: 75  WRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQK-----LSSLPPMP 134

Query: 214 FKRK-GMGFEAMGRKLYILGGC---SWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFAC 273
              K G     +  KL ++ GC   + S  A+ +VY YDT  NSWS+ A L  AR  FAC
Sbjct: 135 GPAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFAC 194

Query: 274 EVLNEKLYAIGGLCSTSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYI-- 333
             +N  +Y +GG         S +VYDP T TW + +++ +       +   +GK+Y+  
Sbjct: 195 AEVNGHVYVVGGHGVDGESLSSAEVYDPETCTW-TFIESLRRPRWGCFASAFNGKLYVMG 254

Query: 334 --RLRSVDSQAYALVYDPTSGMWQHSDS--KMVSGWRGPAVIVDETLYVLDQSSGTRLMM 391
                ++ +     VY+   G W  S +   MV+      V V + L+ +D  +  ++ +
Sbjct: 255 GRSNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTA----HVEVGKKLFCIDWKNHRKMSV 307

[Close]

BLAST of Tan0000395 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-25
Identity = 87/320 (27.19%), Postives = 146/320 (45.62%), Query Frame = 0


Query: 123 LIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWYSCREKNNLAETWIYALCR 182
           LIP LPD++++ IL+R+PR  + +++ VS+RW+  VS+ E YS R++    E W+Y L +
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 183 DKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRK-------------------------- 242
              +++  Y LD  S+K  W+++  +P   ++ +                          
Sbjct: 103 GHEDKLLWYALDPVSTK--WQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFL 162

Query: 243 ------------GMGFEAMGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARC 302
                       G    A+   LY++GG S S+  +  V+ +D   NSWS+ + + ++R 
Sbjct: 163 GRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSC-VWRFDPILNSWSEVSSMLASRA 222

Query: 303 YFACEVLNEKLYAIGGLCSTSG---DRHSWDVYDPCTNTWES--HLDTTKIQ-------- 362
           Y    VLN+KLY +GG+    G      S +VYDP T+ W     +  +K Q        
Sbjct: 223 YSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLA 282

Query: 363 ----NEIEGSMVMDGKIYIRLRSVDSQAYAL-----VYDPTSGMWQHSDSKMVSGWRGP- 377
                   G    +G++ +  +S+ S  + +     VYDP + +W    S M  GW    
Sbjct: 283 DLLKPIATGMTCYNGRLCVP-QSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQ 342

[Close]

BLAST of Tan0000395 vs. ExPASy Swiss-Prot
Match: Q9C6Z0 (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-23
Identity = 84/328 (25.61%), Postives = 157/328 (47.87%), Query Frame = 0


Query: 120 GRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE-WYSCREKNNLAETWIY 179
           G  LIPGLPDD+AL+ L RVP + H + K V KRW  L  ++E +++ R++    + W++
Sbjct: 50  GEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLF 109

Query: 180 ALCRDK-SEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAMGR----KLYILGGC 239
            +   + + ++   VLDL +    W ++ ++P C  K    GF ++       +++ GG 
Sbjct: 110 VVGFSRCTGKIQWKVLDLRN--LTWHEIPAMP-CRDKVCPHGFRSVSMPREGTMFVCGGM 169

Query: 240 SWSEDATGE-VYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLCSTSGDRHSWD 299
               D   + V  YD  KN W+    + +AR +FA  V++  +YA GG  +   +    +
Sbjct: 170 VSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAE 229

Query: 300 VYDPCTNTWE------SHL---DTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPT 359
           V +P    W       +H+   DT  +  ++   +V +G ++    S   Q    VYDP 
Sbjct: 230 VLNPLDGNWRPVSNMVAHMASYDTAVLNGKL---LVTEGWLWPFFVSPRGQ----VYDPR 289

Query: 360 SGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTRP 419
           +  W+     +  GW G +V++ + L+++ +    ++ +++     W  +      L   
Sbjct: 290 TDQWETMSMGLREGWTGTSVVIYDRLFIVSELERMKMKVYDPVTDSWETIN--GPELPEQ 349

Query: 420 PCQLVAV---GRRIVVVGKGLSSVIFDV 429
            C+  AV   G R+ VVG+ L   + ++
Sbjct: 350 ICRPFAVNCYGNRVYVVGRNLHLAVGNI 365

[Close]

BLAST of Tan0000395 vs. NCBI nr
Match: XP_038906518.1 (F-box/kelch-repeat protein SKIP4 [Benincasa hispida])

HSP 1 Score: 689.9 bits (1779), Expect = 1.5e-194
Identity = 327/358 (91.34%), Postives = 342/358 (95.53%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MD+ LGSN L+ELI  PGRSLI  LPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSS+E
Sbjct: 1   MDNVLGSNGLDELIPAPGRSLIHWLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSQE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWK+MKSLPTCSFKRKGMGFEA
Sbjct: 61  WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKKMKSLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTSKNSWS  APLSSARCYFACEVLNE+LYAIGGLC
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSKNSWSPVAPLSSARCYFACEVLNEQLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
           ++SGDRHSWDVYDPCTNTWE HLD T IQNEIEGS+VMDGKIYIRLRSVD QAYALVYDP
Sbjct: 181 TSSGDRHSWDVYDPCTNTWEPHLDITNIQNEIEGSIVMDGKIYIRLRSVDHQAYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           TSG WQHSDS+MVSGW+GPAVIVDETLYVLDQSSGTRL+MWN E KEWIP+GRFSALLTR
Sbjct: 241 TSGTWQHSDSEMVSGWQGPAVIVDETLYVLDQSSGTRLIMWNNEAKEWIPIGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVGR+IVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSD+DVLACKCITI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDIDVLACKCITI 358

[Close]

BLAST of Tan0000395 vs. NCBI nr
Match: XP_008438055.1 (PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis melo] >KAA0048971.1 F-box/kelch-repeat protein SKIP4-like [Cucumis melo var. makuwa] >TYK17593.1 F-box/kelch-repeat protein SKIP4-like [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 5.0e-190
Identity = 318/358 (88.83%), Postives = 334/358 (93.30%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MD+ LGSN LEEL  PPGRSLI  LPDDIALSILSR+PRKYH NLKCVS RWKDLV+S+E
Sbjct: 1   MDNVLGSNSLEELTPPPGRSLIHSLPDDIALSILSRIPRKYHQNLKCVSNRWKDLVNSQE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WY+CREKNNLAETWIYALCRDKSEQ+SCYVLDLNSSKRCWKQMK LPTCSFKRKGMGFEA
Sbjct: 61  WYACREKNNLAETWIYALCRDKSEQLSCYVLDLNSSKRCWKQMKCLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLN KLY +GGLC
Sbjct: 121 MGRKLYVLGGCSWSEDATDEVYCYDTSINSWSPVAPLSSARCYFACEVLNGKLYTMGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
            +SGDRHSWDVYDPCTNTWESHLD T IQNEIEGS+VMDGKIYIRLRSVDSQ YALVYDP
Sbjct: 181 PSSGDRHSWDVYDPCTNTWESHLDNTNIQNEIEGSIVMDGKIYIRLRSVDSQVYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG WQHSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWQHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVGR+IVVVGKGLSSVIFDVSN RTMEGLMVSSSIPR DSD+DVL+CKCITI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNVRTMEGLMVSSSIPRSDSDIDVLSCKCITI 358

[Close]

BLAST of Tan0000395 vs. NCBI nr
Match: XP_022147528.1 (F-box/kelch-repeat protein SKIP4 [Momordica charantia] >XP_022147529.1 F-box/kelch-repeat protein SKIP4 [Momordica charantia])

HSP 1 Score: 673.7 bits (1737), Expect = 1.1e-189
Identity = 321/359 (89.42%), Postives = 340/359 (94.71%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LGSN LEE IQPPGRSL+PGLPDDIALSILSR+PRKYHHNLKCVSKRWKDL+SSEE
Sbjct: 1   MDSVLGSNSLEEPIQPPGRSLLPGLPDDIALSILSRIPRKYHHNLKCVSKRWKDLLSSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSE+VSCYVLDLNSSKRCWK+MKSLPTCSFKRKGMGFEA
Sbjct: 61  WYSCREKNHLAETWIYALCRDKSERVSCYVLDLNSSKRCWKRMKSLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MG+KLY+LGGCSWSEDAT EVYCYDTSKNSW K APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGKKLYLLGGCSWSEDATDEVYCYDTSKNSWIKVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLR-SVDSQAYALVYD 342
           S SGD  SWDVYDPC+NTWESHLD   IQNEIE S+VMDGKIY+RL  SVDSQAYA+VY+
Sbjct: 181 SNSGDPQSWDVYDPCSNTWESHLD-KNIQNEIESSIVMDGKIYVRLHSSVDSQAYAMVYE 240

Query: 343 PTSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLT 402
           P+SGMWQ SDS+MVSGWRGPAVIVDETLYVLDQSSGTRLMMW+ E KEW+PVGRFSALLT
Sbjct: 241 PSSGMWQRSDSEMVSGWRGPAVIVDETLYVLDQSSGTRLMMWSNEDKEWLPVGRFSALLT 300

Query: 403 RPPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           RPPCQLVAVGRRIVVVGKGLSSVIFDVSN RTMEG+MVSSSIPRLDSD+DVLACKCITI
Sbjct: 301 RPPCQLVAVGRRIVVVGKGLSSVIFDVSNGRTMEGVMVSSSIPRLDSDIDVLACKCITI 358

[Close]

BLAST of Tan0000395 vs. NCBI nr
Match: XP_022980337.1 (F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980338.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980339.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980340.1 F-box/kelch-repeat protein SKIP4 [Cucurbita maxima])

HSP 1 Score: 670.2 bits (1728), Expect = 1.2e-188
Identity = 319/358 (89.11%), Postives = 335/358 (93.58%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LG + LEELI P GRSLIPGLPDDI LSILSRVPRKYHHNLK VSKRWKDLV+SEE
Sbjct: 1   MDSVLGPSGLEELIPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSEQVSCYVLDLNSSKR WKQMKSLP+CSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
           S SGDRHSWD+YDPCTN WE  LD T IQNEIEGS+VMDGKIYIR RSVDSQAYALVYDP
Sbjct: 181 SNSGDRHSWDIYDPCTNKWEPCLDITNIQNEIEGSIVMDGKIYIRQRSVDSQAYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG W+HSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVG+RIVVVGKGLSSVIF+V NARTMEGLMVSSSIPRLDSDVDVL+CKC+T+
Sbjct: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTL 358

[Close]

BLAST of Tan0000395 vs. NCBI nr
Match: XP_023526215.1 (F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo] >XP_023526216.1 F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 668.3 bits (1723), Expect = 4.7e-188
Identity = 318/358 (88.83%), Postives = 334/358 (93.30%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LG + LEEL+ P GRSLIPGLPDDI LSILSRVPRKYHHNLK VSKRWKDLV+SEE
Sbjct: 1   MDSVLGPSGLEELVPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSEQVSCYVLDLNSSKR WKQMKSLP+CSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
           S SGDRHSWD+YDPCTN WE  LD T I NEIEGS+VMDGKIYIR RSVDSQAYALVYDP
Sbjct: 181 SNSGDRHSWDIYDPCTNKWEPCLDITNIPNEIEGSIVMDGKIYIRQRSVDSQAYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG W+HSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVG+RIVVVGKGLSSVIF+V NARTMEGLMVSSSIPRLDSDVDVL+CKC+TI
Sbjct: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 358

[Close]

BLAST of Tan0000395 vs. ExPASy TrEMBL
Match: A0A5D3D086 (F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004630 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.4e-190
Identity = 318/358 (88.83%), Postives = 334/358 (93.30%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MD+ LGSN LEEL  PPGRSLI  LPDDIALSILSR+PRKYH NLKCVS RWKDLV+S+E
Sbjct: 1   MDNVLGSNSLEELTPPPGRSLIHSLPDDIALSILSRIPRKYHQNLKCVSNRWKDLVNSQE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WY+CREKNNLAETWIYALCRDKSEQ+SCYVLDLNSSKRCWKQMK LPTCSFKRKGMGFEA
Sbjct: 61  WYACREKNNLAETWIYALCRDKSEQLSCYVLDLNSSKRCWKQMKCLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLN KLY +GGLC
Sbjct: 121 MGRKLYVLGGCSWSEDATDEVYCYDTSINSWSPVAPLSSARCYFACEVLNGKLYTMGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
            +SGDRHSWDVYDPCTNTWESHLD T IQNEIEGS+VMDGKIYIRLRSVDSQ YALVYDP
Sbjct: 181 PSSGDRHSWDVYDPCTNTWESHLDNTNIQNEIEGSIVMDGKIYIRLRSVDSQVYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG WQHSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWQHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVGR+IVVVGKGLSSVIFDVSN RTMEGLMVSSSIPR DSD+DVL+CKCITI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNVRTMEGLMVSSSIPRSDSDIDVLSCKCITI 358

[Close]

BLAST of Tan0000395 vs. ExPASy TrEMBL
Match: A0A1S3AVK1 (F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo OX=3656 GN=LOC103483276 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.4e-190
Identity = 318/358 (88.83%), Postives = 334/358 (93.30%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MD+ LGSN LEEL  PPGRSLI  LPDDIALSILSR+PRKYH NLKCVS RWKDLV+S+E
Sbjct: 1   MDNVLGSNSLEELTPPPGRSLIHSLPDDIALSILSRIPRKYHQNLKCVSNRWKDLVNSQE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WY+CREKNNLAETWIYALCRDKSEQ+SCYVLDLNSSKRCWKQMK LPTCSFKRKGMGFEA
Sbjct: 61  WYACREKNNLAETWIYALCRDKSEQLSCYVLDLNSSKRCWKQMKCLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLN KLY +GGLC
Sbjct: 121 MGRKLYVLGGCSWSEDATDEVYCYDTSINSWSPVAPLSSARCYFACEVLNGKLYTMGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
            +SGDRHSWDVYDPCTNTWESHLD T IQNEIEGS+VMDGKIYIRLRSVDSQ YALVYDP
Sbjct: 181 PSSGDRHSWDVYDPCTNTWESHLDNTNIQNEIEGSIVMDGKIYIRLRSVDSQVYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG WQHSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWQHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVGR+IVVVGKGLSSVIFDVSN RTMEGLMVSSSIPR DSD+DVL+CKCITI
Sbjct: 301 PPCQLVAVGRKIVVVGKGLSSVIFDVSNVRTMEGLMVSSSIPRSDSDIDVLSCKCITI 358

[Close]

BLAST of Tan0000395 vs. ExPASy TrEMBL
Match: A0A6J1D196 (F-box/kelch-repeat protein SKIP4 OS=Momordica charantia OX=3673 GN=LOC111016430 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 5.4e-190
Identity = 321/359 (89.42%), Postives = 340/359 (94.71%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LGSN LEE IQPPGRSL+PGLPDDIALSILSR+PRKYHHNLKCVSKRWKDL+SSEE
Sbjct: 1   MDSVLGSNSLEEPIQPPGRSLLPGLPDDIALSILSRIPRKYHHNLKCVSKRWKDLLSSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSE+VSCYVLDLNSSKRCWK+MKSLPTCSFKRKGMGFEA
Sbjct: 61  WYSCREKNHLAETWIYALCRDKSERVSCYVLDLNSSKRCWKRMKSLPTCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MG+KLY+LGGCSWSEDAT EVYCYDTSKNSW K APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGKKLYLLGGCSWSEDATDEVYCYDTSKNSWIKVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLR-SVDSQAYALVYD 342
           S SGD  SWDVYDPC+NTWESHLD   IQNEIE S+VMDGKIY+RL  SVDSQAYA+VY+
Sbjct: 181 SNSGDPQSWDVYDPCSNTWESHLD-KNIQNEIESSIVMDGKIYVRLHSSVDSQAYAMVYE 240

Query: 343 PTSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLT 402
           P+SGMWQ SDS+MVSGWRGPAVIVDETLYVLDQSSGTRLMMW+ E KEW+PVGRFSALLT
Sbjct: 241 PSSGMWQRSDSEMVSGWRGPAVIVDETLYVLDQSSGTRLMMWSNEDKEWLPVGRFSALLT 300

Query: 403 RPPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           RPPCQLVAVGRRIVVVGKGLSSVIFDVSN RTMEG+MVSSSIPRLDSD+DVLACKCITI
Sbjct: 301 RPPCQLVAVGRRIVVVGKGLSSVIFDVSNGRTMEGVMVSSSIPRLDSDIDVLACKCITI 358

[Close]

BLAST of Tan0000395 vs. ExPASy TrEMBL
Match: A0A6J1IW00 (F-box/kelch-repeat protein SKIP4 OS=Cucurbita maxima OX=3661 GN=LOC111479734 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 6.0e-189
Identity = 319/358 (89.11%), Postives = 335/358 (93.58%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LG + LEELI P GRSLIPGLPDDI LSILSRVPRKYHHNLK VSKRWKDLV+SEE
Sbjct: 1   MDSVLGPSGLEELIPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSEQVSCYVLDLNSSKR WKQMKSLP+CSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
           S SGDRHSWD+YDPCTN WE  LD T IQNEIEGS+VMDGKIYIR RSVDSQAYALVYDP
Sbjct: 181 SNSGDRHSWDIYDPCTNKWEPCLDITNIQNEIEGSIVMDGKIYIRQRSVDSQAYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG W+HSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVG+RIVVVGKGLSSVIF+V NARTMEGLMVSSSIPRLDSDVDVL+CKC+T+
Sbjct: 301 PPCQLVAVGKRIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTL 358

[Close]

BLAST of Tan0000395 vs. ExPASy TrEMBL
Match: A0A6J1EFA9 (F-box/kelch-repeat protein SKIP4 OS=Cucurbita moschata OX=3662 GN=LOC111431991 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.6e-186
Identity = 316/358 (88.27%), Postives = 331/358 (92.46%), Query Frame = 0


Query: 103 MDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEE 162
           MDS LG +  EELI P GRSLIPGLPDDI LSILSRVPRKYHHNLK VSKRWKDLV+SEE
Sbjct: 1   MDSVLGPSGFEELIPPTGRSLIPGLPDDIVLSILSRVPRKYHHNLKSVSKRWKDLVNSEE 60

Query: 163 WYSCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEA 222
           WYSCREKN+LAETWIYALCRDKSEQVSCYVLDLNSSKR WKQMKSLP+CSFKRKGMGFEA
Sbjct: 61  WYSCREKNDLAETWIYALCRDKSEQVSCYVLDLNSSKRRWKQMKSLPSCSFKRKGMGFEA 120

Query: 223 MGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC 282
           MGRKLY+LGGCSWSEDAT EVYCYDTS NSWS  APLSSARCYFACEVLNEKLYAIGGLC
Sbjct: 121 MGRKLYLLGGCSWSEDATDEVYCYDTSTNSWSSVAPLSSARCYFACEVLNEKLYAIGGLC 180

Query: 283 STSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDP 342
           S SGDRHSWD+YDPCTN WE  LD T IQNEIE S+VMDGKIYIR R VDSQAYALVYDP
Sbjct: 181 SNSGDRHSWDIYDPCTNKWEPCLDITNIQNEIESSIVMDGKIYIRQRHVDSQAYALVYDP 240

Query: 343 TSGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTR 402
           +SG W+HSDS+MVSGWRGPAVIVD+TLYVLDQSSGTRLMMWN E KEWIPVGRFSALLTR
Sbjct: 241 SSGTWEHSDSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEVKEWIPVGRFSALLTR 300

Query: 403 PPCQLVAVGRRIVVVGKGLSSVIFDVSNARTMEGLMVSSSIPRLDSDVDVLACKCITI 461
           PPCQLVAVG+ IVVVGKGLSSVIF+V NARTMEGLMVSSSIPRLDSDVDVL+CKC+TI
Sbjct: 301 PPCQLVAVGKIIVVVGKGLSSVIFNVDNARTMEGLMVSSSIPRLDSDVDVLSCKCVTI 358

[Close]

BLAST of Tan0000395 vs. TAIR 10
Match: AT3G61350.1 (SKP1 interacting partner 4 )

HSP 1 Score: 342.0 bits (876), Expect = 7.2e-94
Identity = 176/360 (48.89%), Postives = 237/360 (65.83%), Query Frame = 0


Query: 111 CLEELIQPPGRS------LIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWY 170
           C+ E  Q  G+S      LI G+PDDI+ S L+RVPR+YH  +KCVS+RW+D V S+E  
Sbjct: 3   CIVEDPQRAGQSNETQIALISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMC 62

Query: 171 SCREKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAMG 230
             R + NLAE+WIYALCRD S  V  ++L+  SS+R WK++   P     R+GMGF  +G
Sbjct: 63  DYRNEFNLAESWIYALCRDISGGVFLHMLNPFSSRRSWKRINDYPYIPM-REGMGFAVLG 122

Query: 231 RKLYILGGCSWSEDATGEVYCYDTSKNSW-SKAAPLSSARCYFACEVLNEKLYAIGGLCS 290
           ++L++LGGC W EDAT E+YCYD + N+W     PLS+ RCYFACE L+ K+ AIGGL  
Sbjct: 123 KRLFVLGGCGWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGL 182

Query: 291 TSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPT 350
               + +WD+YDP T T +S  D   I  E+E S VMDG+IYIR   V   + A VY  +
Sbjct: 183 NPNAKRTWDIYDPLTRTCKSCSD-VNIVPEMEDSFVMDGRIYIR-GGVGGSSTA-VYSAS 242

Query: 351 SGMWQHSDSKMVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALLTRP 410
           SG+W+  D  M SGWRGPAV+V   LYVLDQ+ G +L MW  + + WI +G+ S L+ + 
Sbjct: 243 SGIWERMDDDMASGWRGPAVVVAGDLYVLDQTFGAKLTMWCKDTRMWIHIGKLSQLVMKQ 302

Query: 411 PCQLVAVGRRIVVVGKGLSSVIFDVSNAR--TMEGLMVSSSIPRL-DSDVDVLACKCITI 461
           PC+LV++G  I V+GK  S+V+ DV N R   M G+MV SSIP+  D D+DV++CK + I
Sbjct: 303 PCRLVSIGNSIFVIGKDCSTVVIDVENVRKNKMNGVMVCSSIPKTWDDDIDVISCKSVAI 358

[Close]

BLAST of Tan0000395 vs. TAIR 10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 2.4e-36
Identity = 98/321 (30.53%), Postives = 147/321 (45.79%), Query Frame = 0


Query: 116 IQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWYSCREKNNLAET 175
           IQPP   L+PGLPDD+A++ L RVPR  H  L+ V KRW  L S   +YS R+   ++E 
Sbjct: 74  IQPP---LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEE 133

Query: 176 WIYALCRDKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRKGMGFEAM-GRKLYILGGCS 235
           W+Y   RD+  ++S    D  S  + W+ +  +P    +  G G   + G  LY+ GG  
Sbjct: 134 WVYVFKRDRDGKISWNTFDPIS--QLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGKD 193

Query: 236 WSEDATGEVYCYDTSKNSWSKAAPLSSARCYFACEVLNEKLYAIGGLC-STSGDRHSWDV 295
               +   V  Y+   N W +A  +   R +F C V+N  LY  GG C        S +V
Sbjct: 194 PLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 253

Query: 296 YDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYIRLRSVDSQAYALVYDPTSGMWQHSDSK 355
           YDP  N W    D +     + G +V D K +++         +  YDP    W      
Sbjct: 254 YDPNKNRWSFIADMSTAMVPLIG-VVYDKKWFLKGLGSHQLVMSEAYDPEVNSWSPVSDG 313

Query: 356 MVSGWRGPAVIVDETLYVLDQSSGTRLMMWNTEFKEWIPVGRFSALL----TRPPCQLVA 415
           MV+GWR P   ++  LY LD   G +L +++     W       A L    +     LV 
Sbjct: 314 MVAGWRNPCTSLNGRLYGLDCRDGCKLRVFDESTDSWNKFMDSKAHLGNSKSLEAAALVP 373

Query: 416 VGRRIVVVGKGLSSVIFDVSN 431
           +  ++ ++   +S  + DVSN
Sbjct: 374 LHNKLCIIRNNMSMSLVDVSN 388

[Close]

BLAST of Tan0000395 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 9.0e-28
Identity = 93/308 (30.19%), Postives = 151/308 (49.03%), Query Frame = 0


Query: 94  NGLNFSIGHMDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKR 153
           +G+ FS G++D  LGS   E  +  P   LIPGLPDD+A   L+ VPR    ++  V K+
Sbjct: 15  HGMCFSKGNLD--LGSRLSENFMDDP---LIPGLPDDVAKQCLALVPRARFPSMGSVCKK 74

Query: 154 WKDLVSSEEWYSCREKNNLAETWIYALCRDKSEQVSCY-VLDLNSSKRCWKQMKSLPTCS 213
           W+ +V S+E+ + R    + E W+Y L  +   + + + V+D    K     + SLP   
Sbjct: 75  WRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQK-----LSSLPPMP 134

Query: 214 FKRK-GMGFEAMGRKLYILGGC---SWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFAC 273
              K G     +  KL ++ GC   + S  A+ +VY YDT  NSWS+ A L  AR  FAC
Sbjct: 135 GPAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFAC 194

Query: 274 EVLNEKLYAIGGLCSTSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYI-- 333
             +N  +Y +GG         S +VYDP T TW + +++ +       +   +GK+Y+  
Sbjct: 195 AEVNGHVYVVGGHGVDGESLSSAEVYDPETCTW-TFIESLRRPRWGCFASAFNGKLYVMG 254

Query: 334 --RLRSVDSQAYALVYDPTSGMWQHSDS--KMVSGWRGPAVIVDETLYVLDQSSGTRLMM 391
                ++ +     VY+   G W  S +   MV+      V V + L+ +D  +  ++ +
Sbjct: 255 GRSNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTA----HVEVGKKLFCIDWKNHRKMSV 307

[Close]

BLAST of Tan0000395 vs. TAIR 10
Match: AT1G67480.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 9.0e-28
Identity = 93/308 (30.19%), Postives = 151/308 (49.03%), Query Frame = 0


Query: 94  NGLNFSIGHMDSALGSNCLEELIQPPGRSLIPGLPDDIALSILSRVPRKYHHNLKCVSKR 153
           +G+ FS G++D  LGS   E  +  P   LIPGLPDD+A   L+ VPR    ++  V K+
Sbjct: 15  HGMCFSKGNLD--LGSRLSENFMDDP---LIPGLPDDVAKQCLALVPRARFPSMGSVCKK 74

Query: 154 WKDLVSSEEWYSCREKNNLAETWIYALCRDKSEQVSCY-VLDLNSSKRCWKQMKSLPTCS 213
           W+ +V S+E+ + R    + E W+Y L  +   + + + V+D    K     + SLP   
Sbjct: 75  WRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQK-----LSSLPPMP 134

Query: 214 FKRK-GMGFEAMGRKLYILGGC---SWSEDATGEVYCYDTSKNSWSKAAPLSSARCYFAC 273
              K G     +  KL ++ GC   + S  A+ +VY YDT  NSWS+ A L  AR  FAC
Sbjct: 135 GPAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFAC 194

Query: 274 EVLNEKLYAIGGLCSTSGDRHSWDVYDPCTNTWESHLDTTKIQNEIEGSMVMDGKIYI-- 333
             +N  +Y +GG         S +VYDP T TW + +++ +       +   +GK+Y+  
Sbjct: 195 AEVNGHVYVVGGHGVDGESLSSAEVYDPETCTW-TFIESLRRPRWGCFASAFNGKLYVMG 254

Query: 334 --RLRSVDSQAYALVYDPTSGMWQHSDS--KMVSGWRGPAVIVDETLYVLDQSSGTRLMM 391
                ++ +     VY+   G W  S +   MV+      V V + L+ +D  +  ++ +
Sbjct: 255 GRSNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTA----HVEVGKKLFCIDWKNHRKMSV 307

[Close]

BLAST of Tan0000395 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-26
Identity = 87/320 (27.19%), Postives = 146/320 (45.62%), Query Frame = 0


Query: 123 LIPGLPDDIALSILSRVPRKYHHNLKCVSKRWKDLVSSEEWYSCREKNNLAETWIYALCR 182
           LIP LPD++++ IL+R+PR  + +++ VS+RW+  VS+ E YS R++    E W+Y L +
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 183 DKSEQVSCYVLDLNSSKRCWKQMKSLPTCSFKRK-------------------------- 242
              +++  Y LD  S+K  W+++  +P   ++ +                          
Sbjct: 103 GHEDKLLWYALDPVSTK--WQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFL 162

Query: 243 ------------GMGFEAMGRKLYILGGCSWSEDATGEVYCYDTSKNSWSKAAPLSSARC 302
                       G    A+   LY++GG S S+  +  V+ +D   NSWS+ + + ++R 
Sbjct: 163 GRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSC-VWRFDPILNSWSEVSSMLASRA 222

Query: 303 YFACEVLNEKLYAIGGLCSTSG---DRHSWDVYDPCTNTWES--HLDTTKIQ-------- 362
           Y    VLN+KLY +GG+    G      S +VYDP T+ W     +  +K Q        
Sbjct: 223 YSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMPFSKAQVLPNAFLA 282

Query: 363 ----NEIEGSMVMDGKIYIRLRSVDSQAYAL-----VYDPTSGMWQHSDSKMVSGWRGP- 377
                   G    +G++ +  +S+ S  + +     VYDP + +W    S M  GW    
Sbjct: 283 DLLKPIATGMTCYNGRLCVP-QSLYSWPFFVDVGGEVYDPETNLWVEMPSGMGEGWPARQ 342

The following BLAST results are available for this feature:

BLAST of Tan0000395 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2C9	1.0e-92	48.89	F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana OX=3702 GN=SKIP4 PE=1 S...	[more]
Q93W93	3.3e-35	30.53	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]
Q9CAG8	1.3e-26	30.19	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
Q9LM55	2.4e-25	27.19	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q9C6Z0	1.3e-23	25.61	F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g3009...	[more]

BLAST of Tan0000395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906518.1	1.5e-194	91.34	F-box/kelch-repeat protein SKIP4 [Benincasa hispida]	[more]
XP_008438055.1	5.0e-190	88.83	PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis melo] >KAA0048971.1 F-...	[more]
XP_022147528.1	1.1e-189	89.42	F-box/kelch-repeat protein SKIP4 [Momordica charantia] >XP_022147529.1 F-box/kel...	[more]
XP_022980337.1	1.2e-188	89.11	F-box/kelch-repeat protein SKIP4 [Cucurbita maxima] >XP_022980338.1 F-box/kelch-...	[more]
XP_023526215.1	4.7e-188	88.83	F-box/kelch-repeat protein SKIP4 [Cucurbita pepo subsp. pepo] >XP_023526216.1 F-...	[more]

BLAST of Tan0000395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D086	2.4e-190	88.83	F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AVK1	2.4e-190	88.83	F-box/kelch-repeat protein SKIP4-like OS=Cucumis melo OX=3656 GN=LOC103483276 PE...	[more]
A0A6J1D196	5.4e-190	89.42	F-box/kelch-repeat protein SKIP4 OS=Momordica charantia OX=3673 GN=LOC111016430 ...	[more]
A0A6J1IW00	6.0e-189	89.11	F-box/kelch-repeat protein SKIP4 OS=Cucurbita maxima OX=3661 GN=LOC111479734 PE=...	[more]
A0A6J1EFA9	1.6e-186	88.27	F-box/kelch-repeat protein SKIP4 OS=Cucurbita moschata OX=3662 GN=LOC111431991 P...	[more]

BLAST of Tan0000395 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61350.1	7.2e-94	48.89	SKP1 interacting partner 4	[more]
AT1G55270.1	2.4e-36	30.53	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	9.0e-28	30.19	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.2	9.0e-28	30.19	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	1.7e-26	27.19	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 226..273 e-value: 5.7E-8 score: 42.5
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 262..302 e-value: 2.2E-8 score: 33.6 coord: 215..260 e-value: 3.8E-10 score: 39.2
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 127..167 e-value: 7.1E-6 score: 35.5
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 124..160 e-value: 2.2E-7 score: 30.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 121..167 score: 8.570165
None	No IPR available	GENE3D	1.20.1280.50		coord: 109..164 e-value: 2.1E-5 score: 26.2
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 113..436
None	No IPR available	PANTHER	PTHR24414:SF98	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 113..436
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 165..439 e-value: 8.9E-32 score: 112.3
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 175..421
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 118..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000395.1	Tan0000395.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006637	acyl-CoA metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0047617	acyl-CoA hydrolase activity
molecular_function	GO:0005515	protein binding