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Tan0000394 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAAATTCCAAGACATGAACAAATTCTCACGCTGCGACAGAGTATTCAAAAGCATAGACACAGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTCAGTCGGTTCGCGGCGGTGACAGGGGACGAGCTCACAGAGGCGGTGGCGGCCTTCGATTCGGACGGCGATGGACTGCTGGAGATTGCGGAGTTCGAGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGAGGATGAAGGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCAATACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCCTCGGCAGTTATAAGAGAATGATTGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTTACAGTTATGATGTTGCTCTGAAATTGTAAATCTGTAAGCTGGTTCAGGCATATGTTTATGTTTGGGAAAACAGGCCTTGAAGTTTAGAAGTTCTTTTCTCATTTATTTATTTATTAAATGTTGGCTATAAAAAAAATATATGTTAACTACGTCAATTATCTCGAAGTTATGGTCACTTTGCCAACAAATTTGATACTTTAAATTTGATATGTTTGTGTCCGTCTAGGTTCTTAATTAAAAAGGAAATCAAGTACGTTTCTCGAGGCTTCAATTATTCACTATTATTCACTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTACTACATTGTAGTTGTTGTTGCCAAAATCCGGACAGGATAACTCACCTGACTTTCACGTGACAACCACTGTGAATTTGTTTGAAGGGGGAAAAACGTGACCTGCAAAAGAAGAAAGATTTGAACACCGGTGTGGTGCTTGCCACACAGGCTCCAATGCTTAAGTCAAAGAGTGTTTAGATGAGTTTAGCAAAGGTTTCTAGAGTCGAGAAGAAGTTACATTTCCTTTGATAAGAGGAATATTTATAGGTCTTTCTAGGGTGTCAACTCTAATCCATCATGA CAAATTCCAAGACATGAACAAATTCTCACGCTGCGACAGAGTATTCAAAAGCATAGACACAGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTCAGTCGGTTCGCGGCGGTGACAGGGGACGAGCTCACAGAGGCGGTGGCGGCCTTCGATTCGGACGGCGATGGACTGCTGGAGATTGCGGAGTTCGAGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGAGGATGAAGGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCAATACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCCTCGGCAGTTATAAGAGAATGATTGCTAAATTTGATGGTGTCAACTCTAATCCATCATGA ATGAACAAATTCTCACGCTGCGACAGAGTATTCAAAAGCATAGACACAGACTGCGACGGCAAGGTCTCCCCTCACGATCTGCTCAGTCGGTTCGCGGCGGTGACAGGGGACGAGCTCACAGAGGCGGTGGCGGCCTTCGATTCGGACGGCGATGGACTGCTGGAGATTGCGGAGTTCGAGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGAGGATGAAGGAGGCTTTCGAGATGTATGAAATGGAGGGTTTGGGAGTCAATACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCCTCGGCAGTTATAAGAGAATGATTGCTAAATTTGATGGTGTCAACTCTAATCCATCATGA MNKFSRCDRVFKSIDTDCDGKVSPHDLLSRFAAVTGDELTEAVAAFDSDGDGLLEIAEFERFVEEGDEQGKRMKEAFEMYEMEGLGVNTPVSLRRMLSRLGESRTLGSYKRMIAKFDGVNSNPS Homology
BLAST of Tan0000394 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15 Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.5e-14 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.3e-14 Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy Swiss-Prot
Match: Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of Tan0000394 vs. NCBI nr
Match: XP_022989992.1 (putative calcium-binding protein CML19 [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 1.9e-38 Identity = 90/122 (73.77%), Postives = 101/122 (82.79%), Query Frame = 0
BLAST of Tan0000394 vs. NCBI nr
Match: XP_023520938.1 (probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165.2 bits (417), Expect = 3.5e-37 Identity = 89/122 (72.95%), Postives = 101/122 (82.79%), Query Frame = 0
BLAST of Tan0000394 vs. NCBI nr
Match: XP_022962715.1 (probable calcium-binding protein CML31 [Cucurbita moschata] >KAG6601838.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032546.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 3.0e-36 Identity = 87/122 (71.31%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Tan0000394 vs. NCBI nr
Match: XP_038875509.1 (putative calcium-binding protein CML23 [Benincasa hispida]) HSP 1 Score: 144.8 bits (364), Expect = 4.9e-31 Identity = 79/122 (64.75%), Postives = 97/122 (79.51%), Query Frame = 0
BLAST of Tan0000394 vs. NCBI nr
Match: XP_004150479.1 (probable calcium-binding protein CML31 [Cucumis sativus] >KGN51513.1 hypothetical protein Csa_008833 [Cucumis sativus]) HSP 1 Score: 142.9 bits (359), Expect = 1.9e-30 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy TrEMBL
Match: A0A6J1JHC9 (putative calcium-binding protein CML19 OS=Cucurbita maxima OX=3661 GN=LOC111487021 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 9.0e-39 Identity = 90/122 (73.77%), Postives = 101/122 (82.79%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy TrEMBL
Match: A0A6J1HFW4 (probable calcium-binding protein CML31 OS=Cucurbita moschata OX=3662 GN=LOC111463121 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36 Identity = 87/122 (71.31%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy TrEMBL
Match: A0A0A0KPM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571560 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 9.0e-31 Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy TrEMBL
Match: A0A5D3E2X7 (Putative calcium-binding protein CML31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00150 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Tan0000394 vs. ExPASy TrEMBL
Match: A0A1S3AUA4 (probable calcium-binding protein CML31 OS=Cucumis melo OX=3656 GN=LOC103483041 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Tan0000394 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 ) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of Tan0000394 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 ) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 0
BLAST of Tan0000394 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 ) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14 Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of Tan0000394 vs. TAIR 10
Match: AT1G76650.2 (calmodulin-like 38 ) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Tan0000394 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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