Tan0000353 (gene) Snake gourd v1

Overview


Name	Tan0000353
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Chlorophyll A-B binding protein
Location	LG11: 6599192 .. 6600191 (-)
RNA-Seq Expression	Tan0000353
Synteny	Tan0000353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAATTTTAAATATAAAAATAAGCAAATAGAAACCACAAATATAAAGAACGAAAAAAATAGAAAACAAAAAACAAAATATAAGGCCCAAACGGTTACAGCGAACACACAGAGGGGTCATTTTATCCTCAAACTCAGATTTCTCCATCCATGGCGGCCATTCCATCTTCCTCCCTGCAATTCCCAAACTCTCTCGCACTCCCTTCCAATTCAAAACCTCACAAGCCGAATCCCCTCACCTTCTTAACCAGAGCAGCAGATCCAGATTCCCCAGCCGCCGATCCCGAACCTGGATCGGATGGCGATGATTTCGAGGACCGACTGGCCAAGGTCCGGCTCCGATACCGAAGCGGAACGGGAAAGAAGGCGGAGATACGGAAGGCTCGAAAGTCCAAGAAAGGATCCACCGCCGCCGCCTCGTCGGTGTACCTTCCGCCGGTGCCGCTGAAGGAGGCGGTTTCCGGCGGTCTAAAAGTGGAATTCGGATTCAGTCCGTACAGCGAGAGGATAAATGGATGGATTGCGATCCTCGGAATATCGGCCCTGGTTTTGGTGGAATTGGCCACCGGAAAAGGCGTCATCAATTACCACACGCCGGCGATTATACTGATTCAGGTGTATTTTGTAGCGGCGGTTGCTGCTCTGTATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGACGAAATTAAGAATTAGAATTCAATCGACAGTATCTTTAGCTTGTTTTTCCACTCAGCGTTTCGAATTCACTTGTTAAATGTTGACATTGAAGCAATGTTTGAGTTATAAATGAATGTGATAGATGTGCATCGTTGAAGGAAACATTCTTGTTTTTTTTTTTTTTCAAGCTCCATAAAAATATTTTTGGAGAGTTTTAAAATAAAATGAAATTAGATATGATTGAAAATTTGGGCATAGCTAAAGTGGATCAAGACACCCTTTATCATTCAAAAGGGGGTTTAATTCTCACTTCGGTTGAACATTAATTGAG

mRNA sequence

GGAGAATTTTAAATATAAAAATAAGCAAATAGAAACCACAAATATAAAGAACGAAAAAAATAGAAAACAAAAAACAAAATATAAGGCCCAAACGGTTACAGCGAACACACAGAGGGGTCATTTTATCCTCAAACTCAGATTTCTCCATCCATGGCGGCCATTCCATCTTCCTCCCTGCAATTCCCAAACTCTCTCGCACTCCCTTCCAATTCAAAACCTCACAAGCCGAATCCCCTCACCTTCTTAACCAGAGCAGCAGATCCAGATTCCCCAGCCGCCGATCCCGAACCTGGATCGGATGGCGATGATTTCGAGGACCGACTGGCCAAGGTCCGGCTCCGATACCGAAGCGGAACGGGAAAGAAGGCGGAGATACGGAAGGCTCGAAAGTCCAAGAAAGGATCCACCGCCGCCGCCTCGTCGGTGTACCTTCCGCCGGTGCCGCTGAAGGAGGCGGTTTCCGGCGGTCTAAAAGTGGAATTCGGATTCAGTCCGTACAGCGAGAGGATAAATGGATGGATTGCGATCCTCGGAATATCGGCCCTGGTTTTGGTGGAATTGGCCACCGGAAAAGGCGTCATCAATTACCACACGCCGGCGATTATACTGATTCAGGTGTATTTTGTAGCGGCGGTTGCTGCTCTGTATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGACGAAATTAAGAATTAGAATTCAATCGACAGTATCTTTAGCTTGTTTTTCCACTCAGCGTTTCGAATTCACTTGTTAAATGTTGACATTGAAGCAATGTTTGAGTTATAAATGAATGTGATAGATGTGCATCGTTGAAGGAAACATTCTTGTTTTTTTTTTTTTTCAAGCTCCATAAAAATATTTTTGGAGAGTTTTAAAATAAAATGAAATTAGATATGATTGAAAATTTGGGCATAGCTAAAGTGGATCAAGACACCCTTTATCATTCAAAAGGGGGTTTAATTCTCACTTCGGTTGAACATTAATTGAG

Coding sequence (CDS)

ATGGCGGCCATTCCATCTTCCTCCCTGCAATTCCCAAACTCTCTCGCACTCCCTTCCAATTCAAAACCTCACAAGCCGAATCCCCTCACCTTCTTAACCAGAGCAGCAGATCCAGATTCCCCAGCCGCCGATCCCGAACCTGGATCGGATGGCGATGATTTCGAGGACCGACTGGCCAAGGTCCGGCTCCGATACCGAAGCGGAACGGGAAAGAAGGCGGAGATACGGAAGGCTCGAAAGTCCAAGAAAGGATCCACCGCCGCCGCCTCGTCGGTGTACCTTCCGCCGGTGCCGCTGAAGGAGGCGGTTTCCGGCGGTCTAAAAGTGGAATTCGGATTCAGTCCGTACAGCGAGAGGATAAATGGATGGATTGCGATCCTCGGAATATCGGCCCTGGTTTTGGTGGAATTGGCCACCGGAAAAGGCGTCATCAATTACCACACGCCGGCGATTATACTGATTCAGGTGTATTTTGTAGCGGCGGTTGCTGCTCTGTATATCAAATACGAGAAGGAGAAGGTTAGCGTTTGGCCGCCGGACGAAATTAAGAATTAG

Protein sequence

MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAKVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPDEIKN

Homology

[Close]

BLAST of Tan0000353 vs. NCBI nr
Match: XP_022133568.1 (uncharacterized protein LOC111006119 [Momordica charantia])

HSP 1 Score: 321.6 bits (823), Expect = 4.3e-84
Identity = 167/186 (89.78%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAK 60
           MAAIPSSSLQFPNSL  PSNSKPHK  PLTF+TRAADP++PAADPEPGSDGDDFE+RLAK
Sbjct: 1   MAAIPSSSLQFPNSLPFPSNSKPHKTKPLTFVTRAADPETPAADPEPGSDGDDFENRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAAA--SSVYLPPVPLKEAVSGGLKVEFGFSPYSE 120
           VRL+YRSGTGKKAEIRKARKS KGSTA A  SSVYLPPVPLKEAVSGGLKVEFGFSP+SE
Sbjct: 61  VRLKYRSGTGKKAEIRKARKSNKGSTAGAGGSSVYLPPVPLKEAVSGGLKVEFGFSPFSE 120

Query: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWP 180
           RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAA+Y+K+EKEKVSVWP
Sbjct: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAAVYVKFEKEKVSVWP 180

Query: 181 PDEIKN 185
           P+E+KN
Sbjct: 181 PEEVKN 186

[Close]

BLAST of Tan0000353 vs. NCBI nr
Match: XP_038890345.1 (uncharacterized protein LOC120079944 [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 4.1e-82
Identity = 170/184 (92.39%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAK 60
           MAAIPSSSLQFPNSL L     P KP  LTF+TRAADP+SPAAD E GSDGDDFEDRLAK
Sbjct: 1   MAAIPSSSLQFPNSLTL-----PRKPKLLTFVTRAADPESPAADSESGSDGDDFEDRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120
           VRLRYRSGTGKKAEIRKARKSKKGSTAA SSVYLPPVPLKEAVSGGLKVEFGFSPYSERI
Sbjct: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAANSSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD
Sbjct: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 179

Query: 181 EIKN 185
           EIKN
Sbjct: 181 EIKN 179

[Close]

BLAST of Tan0000353 vs. NCBI nr
Match: XP_004149820.1 (uncharacterized protein LOC101221723 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 168/185 (90.81%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPE-PGSDGDDFEDRLA 60
           MAAIPSSSLQFPNSL LPSNSKP KP  LTFLTRAADP+SPA D E PGSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR+RYRSGTGKKAEIRKARKSK+GST AASSVYLPPV LKEAVSGGLKVEFGFSPYSER
Sbjct: 61  KVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSER 120

Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPS 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Tan0000353 vs. NCBI nr
Match: TYK05751.1 (uncharacterized protein E5676_scaffold98G002400 [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80
Identity = 167/185 (90.27%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPE-PGSDGDDFEDRLA 60
           MAAIPSSSLQFPNSL LPSNSK HKP  LTFLTRAADP+S  +D E PGSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGST AASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Tan0000353 vs. NCBI nr
Match: XP_023550096.1 (uncharacterized protein LOC111808391 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 166/184 (90.22%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAK 60
           MAAIPSSSLQFPNSLA  SNSKPHKP  LTF+TRAADP+SPAAD EP SDGDDFEDRLA 
Sbjct: 1   MAAIPSSSLQFPNSLAFASNSKPHKPKSLTFVTRAADPESPAADSEPRSDGDDFEDRLA- 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120
            RL+ R GTGKKAEIRKARKS+KGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI
Sbjct: 61  -RLQLRRGTGKKAEIRKARKSRKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILG+SALVLVELATGKGVINYHTPAIILIQVYFVAA AALYIKYEKEKVSVWP D
Sbjct: 121 NGWIAILGLSALVLVELATGKGVINYHTPAIILIQVYFVAAAAALYIKYEKEKVSVWPQD 180

Query: 181 EIKN 185
           EIK+
Sbjct: 181 EIKS 182

[Close]

BLAST of Tan0000353 vs. ExPASy TrEMBL
Match: A0A6J1BZH5 (uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006119 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 167/186 (89.78%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAK 60
           MAAIPSSSLQFPNSL  PSNSKPHK  PLTF+TRAADP++PAADPEPGSDGDDFE+RLAK
Sbjct: 1   MAAIPSSSLQFPNSLPFPSNSKPHKTKPLTFVTRAADPETPAADPEPGSDGDDFENRLAK 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAAA--SSVYLPPVPLKEAVSGGLKVEFGFSPYSE 120
           VRL+YRSGTGKKAEIRKARKS KGSTA A  SSVYLPPVPLKEAVSGGLKVEFGFSP+SE
Sbjct: 61  VRLKYRSGTGKKAEIRKARKSNKGSTAGAGGSSVYLPPVPLKEAVSGGLKVEFGFSPFSE 120

Query: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWP 180
           RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAA+Y+K+EKEKVSVWP
Sbjct: 121 RINGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAAVYVKFEKEKVSVWP 180

Query: 181 PDEIKN 185
           P+E+KN
Sbjct: 181 PEEVKN 186

[Close]

BLAST of Tan0000353 vs. ExPASy TrEMBL
Match: A0A0A0KS45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.7e-82
Identity = 168/185 (90.81%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPE-PGSDGDDFEDRLA 60
           MAAIPSSSLQFPNSL LPSNSKP KP  LTFLTRAADP+SPA D E PGSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKPPKPKLLTFLTRAADPESPAGDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR+RYRSGTGKKAEIRKARKSK+GST AASSVYLPPV LKEAVSGGLKVEFGFSPYSER
Sbjct: 61  KVRIRYRSGTGKKAEIRKARKSKQGSTTAASSVYLPPVSLKEAVSGGLKVEFGFSPYSER 120

Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPS 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Tan0000353 vs. ExPASy TrEMBL
Match: A0A5D3C1D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002400 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81
Identity = 167/185 (90.27%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPE-PGSDGDDFEDRLA 60
           MAAIPSSSLQFPNSL LPSNSK HKP  LTFLTRAADP+S  +D E PGSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGST AASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAVAA+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVAAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Tan0000353 vs. ExPASy TrEMBL
Match: A0A1S3CJX9 (uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 166/185 (89.73%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPE-PGSDGDDFEDRLA 60
           MAAIPSSSLQFPNSL LPSNSK HKP  LTFLTRAADP+S  +D E PGSDGDDFEDRLA
Sbjct: 1   MAAIPSSSLQFPNSLTLPSNSKSHKPRLLTFLTRAADPESTPSDSEQPGSDGDDFEDRLA 60

Query: 61  KVRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSER 120
           KVR RYRSGTGKKAEIRKARKSKKGST AASSVYLPPVPLKE VSGGLKVEFGFSPYSER
Sbjct: 61  KVRFRYRSGTGKKAEIRKARKSKKGSTTAASSVYLPPVPLKEPVSGGLKVEFGFSPYSER 120

Query: 121 INGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPP 180
           INGWIAILGISALVLVELATGK VI+YHTPAIILIQVYFVAAV A+YIKYEKEKVSVWP 
Sbjct: 121 INGWIAILGISALVLVELATGKSVISYHTPAIILIQVYFVAAVTAVYIKYEKEKVSVWPR 180

Query: 181 DEIKN 185
           DEIK+
Sbjct: 181 DEIKS 185

[Close]

BLAST of Tan0000353 vs. ExPASy TrEMBL
Match: A0A6J1JUJ1 (uncharacterized protein LOC111489022 OS=Cucurbita maxima OX=3661 GN=LOC111489022 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 164/184 (89.13%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MAAIPSSSLQFPNSLALPSNSKPHKPNPLTFLTRAADPDSPAADPEPGSDGDDFEDRLAK 60
           MAAIPSSSLQFPNSLAL SNSKPHKP  LTF+ RAADP+SPAAD EP SDGDDFEDRLA 
Sbjct: 1   MAAIPSSSLQFPNSLALASNSKPHKPKTLTFVIRAADPESPAADSEPRSDGDDFEDRLA- 60

Query: 61  VRLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120
            RL+ R GTGKKAEIRKARKS+KGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI
Sbjct: 61  -RLQLRRGTGKKAEIRKARKSRKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERI 120

Query: 121 NGWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 180
           NGWIAILG+ ALVLVELATGKGVINYHTPAIILIQ YFVAA AALYIKYEKEKVSVWP D
Sbjct: 121 NGWIAILGLWALVLVELATGKGVINYHTPAIILIQAYFVAAAAALYIKYEKEKVSVWPQD 180

Query: 181 EIKN 185
           EIK+
Sbjct: 181 EIKS 182

[Close]

BLAST of Tan0000353 vs. TAIR 10
Match: AT3G12345.1 (unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 191.4 bits (485), Expect = 6.3e-49
Identity = 103/179 (57.54%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 11  FPNSLALPSNSKPHKPNPLTFLTRAA---------DPDSPAADPEPGSDGDDFEDRLAKV 70
           FP+   +P+     KPN L   T  A          PD      E G+D D FE RL+ +
Sbjct: 12  FPSLRFIPAG----KPNALRIFTVHATDVESTEDTQPDPETTQSESGTDPDQFESRLSNI 71

Query: 71  RLRYRSGTGKKAEIRKARKSKKGSTAAASSVYLPPVPLKEAVSGGLKVEFGFSPYSERIN 130
           RLRYRSGTGKKAE+RK++K   GS +  + +YLPPV LKEAVSGGLKVE GFSP+SERIN
Sbjct: 72  RLRYRSGTGKKAEVRKSKKGSSGSPSKGTGIYLPPVSLKEAVSGGLKVEPGFSPFSERIN 131

Query: 131 GWIAILGISALVLVELATGKGVINYHTPAIILIQVYFVAAVAALYIKYEKEKVSVWPPD 181
           G IA LG++AL+LVELATGK V+NYHTP+++ +Q+YFVAAV+A+++K EKEKVSVWP D
Sbjct: 132 GRIAGLGLTALLLVELATGKSVLNYHTPSVVFLQIYFVAAVSAMFVKIEKEKVSVWPKD 186

The following BLAST results are available for this feature:

BLAST of Tan0000353 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000353 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133568.1	4.3e-84	89.78	uncharacterized protein LOC111006119 [Momordica charantia]	[more]
XP_038890345.1	4.1e-82	92.39	uncharacterized protein LOC120079944 [Benincasa hispida]	[more]
XP_004149820.1	2.0e-81	90.81	uncharacterized protein LOC101221723 [Cucumis sativus]	[more]
TYK05751.1	1.0e-80	90.27	uncharacterized protein E5676_scaffold98G002400 [Cucumis melo var. makuwa]	[more]
XP_023550096.1	1.3e-80	90.22	uncharacterized protein LOC111808391 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0000353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZH5	2.1e-84	89.78	uncharacterized protein LOC111006119 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0KS45	9.7e-82	90.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505130 PE=4 SV=1	[more]
A0A5D3C1D6	4.8e-81	90.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJX9	1.4e-80	89.73	uncharacterized protein LOC103501667 OS=Cucumis melo OX=3656 GN=LOC103501667 PE=...	[more]
A0A6J1JUJ1	2.0e-79	89.13	uncharacterized protein LOC111489022 OS=Cucurbita maxima OX=3661 GN=LOC111489022...	[more]

BLAST of Tan0000353 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12345.1	6.3e-49	57.54	unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 22..180
None	No IPR available	PANTHER	PTHR14154:SF15	FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 22..180
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 110..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000353.1	Tan0000353.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane