Tan0000319 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCGTTTGGAAAGTTGGAGAGGAAGTTTTGGCAGGGGATGGGAAATTGGCGCCTTTAGTGCGATCTTATTTACAGATTTCAAGCATCACTATCCTTTCTTATATGGCAAGGAAAATCTTCGAAATCCCCGAGCATTGGAGAGCTTTGGAATTCTGGCTGCTATTTAAAGGAATTTGGACCCTTCTTCTAAACACATCCTGGGCTAGTATTCACCTAATAATGGAATCAATTCAGTTAGGAATGTTGGTCGAGAAGCTGAAGCTCACCTCAGAAGAGAAACAAACAATTTTGGTTCCTGATGATGATATAGATGAAAGTATACAATTACTTCAATTGGCTCTTCTCTGTAAAAGTATCTCGGTCACGCCAATAAATTTAGACTTATTCAAACAAACAATACCGAAGATTTGGGGAGTAGATGCACCGCTTTCTATCGAAAAGGTGGGTTTCAACATATTCTTGTGCAACTTCCATTCTTTGGCGGACAAACGAAGAACGTTAGAAAATGATCCCTGATACTACGACAGAGCAATCCTTCTCCTAGACGAGCTCAGAGGATCACGTTGTTTCGGTGATCATGAATTCTGGTACGCTTCCTTTTGGATTCATATCCACAATCTACCCCCTGCAGGTCAGACTAAGATGATGGCACGGATATGTGGTAACCGACTAGGACAATTCCAAAAGGTGGACTCCTTCGATTTAGACTTCTGCTGGGGGAACACTCTTCACATCAGAATCAGGATTGATGTTACAAAGCCATTGAAAAGAGGGTTGGAGGTGAAAGTCGGAGTGATGGGCGAGGAAACATGGTGTCCGGTGACCTACGAAAAGCTCCCGGATTTCTGTTACAGATGCAGGAGAATTGGCCATAGAAAACGGGAATGCCCTTTCGAAGTTGATATTGATGCTGAGGGAAAGAAATTCGGACCTAGTCTCCGCCACTCCACCTCCTGAGAGGCATCCCTGTCTGGTTTTCGTCCAATGAGCATGGATTGTAGAGGTCGAGTGAGATCCAACTGAGGGTGAAACGAGGGTTCAGGGCAACGAAGAGCAGAAGAGGGAGACTCGGAAGGGGATCCAAACCAAAGCCCCCCCTCAACCCCCTCGGTTCAGGCGAGCAGCGGTGGCTCACCGAAGATACAAAATAAGAAACCGAAAATGACCGGCGACAATGAATCAAGGAAGTTTTCCGATGACTTTCAAATTATATTAAATGCTATTAACTTCTCAGCTACAACGACTACAAAGGAAGGAGATAAAGCGGGATTCAATGAGCATTTAAAGGCACCCCGAAAGATGAAGAAAGTTGTCGTTCAGGAGGTCACCAAAACGTTAGGGTTTGAGGAGTCAGTTTCGGATGGAAAGTACAAAAATGAAAAGAAGAGGGCGATCATTGAAAGAGACGGTTGTGGGGCCCACACCAGTTAG ATGTGCGTTTGGAAAGTTGGAGAGGAAGTTTTGGCAGGGGATGGGAAATTGGCGCCTTTAGTGCGATCTTATTTACAGATTTCAAGCATCACTATCCTTTCTTATATGGCAAGGAAAATCTTCGAAATCCCCGAGCATTGGAGAGCTTTGGAATTCTGGCTGCTATTTAAAGGAATTTGGACCCTTCTTCTAAACACATCCTGGGCTAGTATTCACCTAATAATGGAATCAATTCAGTTAGGAATGTTGGTCGAGAAGCTGAAGCTCACCTCAGAAGAGAAACAAACAATTTTGGTTCCTGATGATGATATAGATGAAAGTCAGACTAAGATGATGGCACGGATATGTGGTAACCGACTAGGACAATTCCAAAAGGTGGACTCCTTCGATTTAGACTTCTGCTGGGGGAACACTCTTCACATCAGAATCAGGATTGATGTTACAAAGCCATTGAAAAGAGGGTTGGAGGTGAAAGTCGGAGTGATGGGCGAGGAAACATGGTGTCCGGTGACCTACGAAAAGCTCCCGGATTTCTGTTACAGATGCAGGAGAATTGGCCATAGAAAACGGGAATGCCCTTTCGAAGTTGATATTGATGCTGAGGGAAAGAAATTCGGACCTAGGCAACGAAGAGCAGAAGAGGGAGACTCGGAAGGGGATCCAAACCAAAGCCCCCCCTCAACCCCCTCGGTTCAGGCGAGCAGCGGTGGCTCACCGAAGATACAAAATAAGAAACCGAAAATGACCGGCGACAATGAATCAAGGAAGTTTTCCGATGACTTTCAAATTATATTAAATGCTATTAACTTCTCAGCTACAACGACTACAAAGGAAGGAGATAAAGCGGGATTCAATGAGCATTTAAAGGCACCCCGAAAGATGAAGAAAGTTGTCGTTCAGGAGGTCACCAAAACGTTAGGGTTTGAGGAGTCAGTTTCGGATGGAAAGTACAAAAATGAAAAGAAGAGGGCGATCATTGAAAGAGACGGTTGTGGGGCCCACACCAGTTAG ATGTGCGTTTGGAAAGTTGGAGAGGAAGTTTTGGCAGGGGATGGGAAATTGGCGCCTTTAGTGCGATCTTATTTACAGATTTCAAGCATCACTATCCTTTCTTATATGGCAAGGAAAATCTTCGAAATCCCCGAGCATTGGAGAGCTTTGGAATTCTGGCTGCTATTTAAAGGAATTTGGACCCTTCTTCTAAACACATCCTGGGCTAGTATTCACCTAATAATGGAATCAATTCAGTTAGGAATGTTGGTCGAGAAGCTGAAGCTCACCTCAGAAGAGAAACAAACAATTTTGGTTCCTGATGATGATATAGATGAAAGTCAGACTAAGATGATGGCACGGATATGTGGTAACCGACTAGGACAATTCCAAAAGGTGGACTCCTTCGATTTAGACTTCTGCTGGGGGAACACTCTTCACATCAGAATCAGGATTGATGTTACAAAGCCATTGAAAAGAGGGTTGGAGGTGAAAGTCGGAGTGATGGGCGAGGAAACATGGTGTCCGGTGACCTACGAAAAGCTCCCGGATTTCTGTTACAGATGCAGGAGAATTGGCCATAGAAAACGGGAATGCCCTTTCGAAGTTGATATTGATGCTGAGGGAAAGAAATTCGGACCTAGGCAACGAAGAGCAGAAGAGGGAGACTCGGAAGGGGATCCAAACCAAAGCCCCCCCTCAACCCCCTCGGTTCAGGCGAGCAGCGGTGGCTCACCGAAGATACAAAATAAGAAACCGAAAATGACCGGCGACAATGAATCAAGGAAGTTTTCCGATGACTTTCAAATTATATTAAATGCTATTAACTTCTCAGCTACAACGACTACAAAGGAAGGAGATAAAGCGGGATTCAATGAGCATTTAAAGGCACCCCGAAAGATGAAGAAAGTTGTCGTTCAGGAGGTCACCAAAACGTTAGGGTTTGAGGAGTCAGTTTCGGATGGAAAGTACAAAAATGAAAAGAAGAGGGCGATCATTGAAAGAGACGGTTGTGGGGCCCACACCAGTTAG MCVWKVGEEVLAGDGKLAPLVRSYLQISSITILSYMARKIFEIPEHWRALEFWLLFKGIWTLLLNTSWASIHLIMESIQLGMLVEKLKLTSEEKQTILVPDDDIDESQTKMMARICGNRLGQFQKVDSFDLDFCWGNTLHIRIRIDVTKPLKRGLEVKVGVMGEETWCPVTYEKLPDFCYRCRRIGHRKRECPFEVDIDAEGKKFGPRQRRAEEGDSEGDPNQSPPSTPSVQASSGGSPKIQNKKPKMTGDNESRKFSDDFQIILNAINFSATTTTKEGDKAGFNEHLKAPRKMKKVVVQEVTKTLGFEESVSDGKYKNEKKRAIIERDGCGAHTS Homology
BLAST of Tan0000319 vs. NCBI nr
Match: XP_039815364.1 (uncharacterized protein LOC120678302 [Panicum virgatum]) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-15 Identity = 67/193 (34.72%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of Tan0000319 vs. NCBI nr
Match: XP_039827601.1 (uncharacterized protein LOC120689378 [Panicum virgatum]) HSP 1 Score: 92.4 bits (228), Expect = 7.8e-15 Identity = 65/193 (33.68%), Postives = 92/193 (47.67%), Query Frame = 0
BLAST of Tan0000319 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-14 Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Tan0000319 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-13 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Tan0000319 vs. NCBI nr
Match: XP_031120295.1 (uncharacterized protein LOC116023434 [Ipomoea triloba]) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-13 Identity = 64/205 (31.22%), Postives = 100/205 (48.78%), Query Frame = 0
BLAST of Tan0000319 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.4e-15 Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Tan0000319 vs. ExPASy TrEMBL
Match: A0A803P119 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 8.4e-15 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Tan0000319 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.5e-14 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of Tan0000319 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.1e-14 Identity = 53/136 (38.97%), Postives = 73/136 (53.68%), Query Frame = 0
BLAST of Tan0000319 vs. ExPASy TrEMBL
Match: A0A7J6FN44 (zf-CCHC_4 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_000357 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|