Tan0000289 (gene) Snake gourd v1

Overview


Name	Tan0000289
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG01: 107226333 .. 107227712 (+)
RNA-Seq Expression	Tan0000289
Synteny	Tan0000289

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACCCACAAACCAATTTCTCCCTTTCGCCTGTGTTCACTTCTTCGTCTCCAAAACGATCCAAAACTCGCTTTTCAACTCTTCCAGAACCCTAATCCCAGTTCTTCGAAACCCCCAAAACCCTTCCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTTGGCAGGGCCAAAATGTTCCATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGGTTTGCTCCTCATGAGATTATTTTTTGTAATGTCATTTCCTTCTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCACGTGTTCGATAAAATTCCATCCTTTGGTTGCAAGCGGACGGTGAAATCCGCAAATTCGTTGTTGGATGCATTGTTGAAGTGCAGTGAATTTGAGAAAATGGCGGAAGTTTTTGTGGGTATTGGTAAGTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGTATGGGAAGTGTTCGATGAAATGCAAAAGAGAGGTGTGAACCCAAATGTGGTTACTTTTGGAACTTTGATCTATGGGCTCTCTCTGAATTCTAACTTGAAAGAAGCATTGAAGTTGAAAGAGGATATGGTGAGAGTATACAGGACTTTGCCTAATGCGTCAATATATGCTACTTTGATCAAAGCGTTCTGTGGGATTGGAGAATTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTAATCAGTGCGCTCTTCAAACATGGTAGAAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGAGAATGGATGCAAACCCAATACGATCACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAACGATTTCAAATCTGCGTATAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAACCAGATGTGATCAGTTTCAATACAATCATTGGAGGGTTATGCAAGGAGAGGAAATGGGATAAAGCTATGGACTTGCTTGAAGATATGCCAAGACGAGGTTGCTCTCCTGATGTGGTATCCTACAGGACACTTTTTGATGGGCTGTGTGAAATCATGCAGTTACAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATGAACCTCGTTCGGAAAGCATAAACAAACTCGTTGATAGGTTGTGCCAGGAATGCAATATGGAGTTGTTGTGGATGGTTCTGAACAGTTTAGGAAGAGGAAATGTCATGAATGTGGATATATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTAACAGAAGCCTCCGAGTTACTTGATTCATTGATTAATTAA

mRNA sequence

ATGAAGACCCACAAACCAATTTCTCCCTTTCGCCTGTGTTCACTTCTTCGTCTCCAAAACGATCCAAAACTCGCTTTTCAACTCTTCCAGAACCCTAATCCCAGTTCTTCGAAACCCCCAAAACCCTTCCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTTGGCAGGGCCAAAATGTTCCATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGGTTTGCTCCTCATGAGATTATTTTTTGTAATGTCATTTCCTTCTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCACGTGTTCGATAAAATTCCATCCTTTGGTTGCAAGCGGACGGTGAAATCCGCAAATTCGTTGTTGGATGCATTGTTGAAGTGCAGTGAATTTGAGAAAATGGCGGAAGTTTTTGTGGGTATTGGTAAGTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGTATGGGAAGTGTTCGATGAAATGCAAAAGAGAGGTGTGAACCCAAATGTGGTTACTTTTGGAACTTTGATCTATGGGCTCTCTCTGAATTCTAACTTGAAAGAAGCATTGAAGTTGAAAGAGGATATGGTGAGAGTATACAGGACTTTGCCTAATGCGTCAATATATGCTACTTTGATCAAAGCGTTCTGTGGGATTGGAGAATTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTAATCAGTGCGCTCTTCAAACATGGTAGAAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGAGAATGGATGCAAACCCAATACGATCACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAACGATTTCAAATCTGCGTATAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAACCAGATGTGATCAGTTTCAATACAATCATTGGAGGGTTATGCAAGGAGAGGAAATGGGATAAAGCTATGGACTTGCTTGAAGATATGCCAAGACGAGGTTGCTCTCCTGATGTGGTATCCTACAGGACACTTTTTGATGGGCTGTGTGAAATCATGCAGTTACAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATGAACCTCGTTCGGAAAGCATAAACAAACTCGTTGATAGGTTGTGCCAGGAATGCAATATGGAGTTGTTGTGGATGGTTCTGAACAGTTTAGGAAGAGGAAATGTCATGAATGTGGATATATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTAACAGAAGCCTCCGAGTTACTTGATTCATTGATTAATTAA

Coding sequence (CDS)

ATGAAGACCCACAAACCAATTTCTCCCTTTCGCCTGTGTTCACTTCTTCGTCTCCAAAACGATCCAAAACTCGCTTTTCAACTCTTCCAGAACCCTAATCCCAGTTCTTCGAAACCCCCAAAACCCTTCCGTTACTCTTTACTTTCCTATGATCTCATCATCACCAAGCTTGGCAGGGCCAAAATGTTCCATGAAATGGAAGAAATCCTCCACCAGCTCAAGCAAGAGACTCGGTTTGCTCCTCATGAGATTATTTTTTGTAATGTCATTTCCTTCTATGGCCGAGCCCGCCTCCCTGACCGTGCCTTCCACGTGTTCGATAAAATTCCATCCTTTGGTTGCAAGCGGACGGTGAAATCCGCAAATTCGTTGTTGGATGCATTGTTGAAGTGCAGTGAATTTGAGAAAATGGCGGAAGTTTTTGTGGGTATTGGTAAGTATGGCTCCCCTGATGCTTGTACTTTTAACATTTTGATTCATGCTGCTTGTTTGTGTGGGGATTTGGATGATGTATGGGAAGTGTTCGATGAAATGCAAAAGAGAGGTGTGAACCCAAATGTGGTTACTTTTGGAACTTTGATCTATGGGCTCTCTCTGAATTCTAACTTGAAAGAAGCATTGAAGTTGAAAGAGGATATGGTGAGAGTATACAGGACTTTGCCTAATGCGTCAATATATGCTACTTTGATCAAAGCGTTCTGTGGGATTGGAGAATTGAATTTGGCTTTCAAGCTAAAAGAGGAGATGGTGACTAACAAGGTAAAATTGGACTCGGCAATTTATTCTACTTTAATCAGTGCGCTCTTCAAACATGGTAGAAAAGAAGAAGTTTCTGACATTTTAGGAGAAATGGGAGAGAATGGATGCAAACCCAATACGATCACCTACAATGCCATGATCAATGGGCACTGTAAAGAAAACGATTTCAAATCTGCGTATAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAACCAGATGTGATCAGTTTCAATACAATCATTGGAGGGTTATGCAAGGAGAGGAAATGGGATAAAGCTATGGACTTGCTTGAAGATATGCCAAGACGAGGTTGCTCTCCTGATGTGGTATCCTACAGGACACTTTTTGATGGGCTGTGTGAAATCATGCAGTTACAGGAAGCAACTTCCATACTGGATGAGATGATCTTCAAGGGTTATGAACCTCGTTCGGAAAGCATAAACAAACTCGTTGATAGGTTGTGCCAGGAATGCAATATGGAGTTGTTGTGGATGGTTCTGAACAGTTTAGGAAGAGGAAATGTCATGAATGTGGATATATGGGCTAGAGTTGTTGCTTTTGTTTGCAAGGAGAAGCTAACAGAAGCCTCCGAGTTACTTGATTCATTGATTAATTAA

Protein sequence

MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKSANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQKRGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMINGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCSPDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMVLNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN

Homology

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BLAST of Tan0000289 vs. ExPASy Swiss-Prot
Match: Q9MAG8 (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 3.9e-153
Identity = 261/459 (56.86%), Postives = 337/459 (73.42%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           M   K +S FRL SLLR +NDP  A +LF+NP+P S+ P +PFRYSLL YD+IITKLG +
Sbjct: 1   MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGS 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF E++++L  LK +TR  P EIIFCNVI+F+GR +LP RA H+FD++P + C+RTVKS
Sbjct: 61  KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
            NSLL ALLKC E EKM E    I ++G PDACT+NILIH     G  DD  ++FDEM K
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           + V P  VTFGTLI+GL  +S +KEALK+K DM++VY   P   IYA+LIKA C IGEL+
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELS 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
            AFKLK+E    K+K+D+AIYSTLIS+L K GR  EVS IL EM E GCKP+T+TYN +I
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG C END +SA RVLDEMVEKG KPDVIS+N I+G   + +KW++A  L EDMPRRGCS
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PD +SYR +FDGLCE +Q +EA  ILDEM+FKGY+PR + +   + +LC+   +E+L  V
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           ++SL RG   + D+W+ ++  +CKE +   S+ +D L+N
Sbjct: 421 ISSLHRGIAGDADVWSVMIPTMCKEPV--ISDSIDLLLN 457

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BLAST of Tan0000289 vs. ExPASy Swiss-Prot
Match: Q3E9F0 (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-52
Identity = 135/463 (29.16%), Postives = 238/463 (51.40%), Query Frame = 0


Query: 5   KPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKMFH 64
           K IS     SL++ + DP+    +F     + +   K F ++  +Y +++  L R K F 
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIF-----NKASQQKGFNHNNATYSVLLDNLVRHKKFL 111

Query: 65  EMEEILHQLKQET-RFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFG-CKRTVKSAN 124
            ++ ILHQ+K ET RF   E +F N++  + R+ L D+   +F+ I      K ++ + +
Sbjct: 112 AVDAILHQMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 171

Query: 125 SLLDALLKCSEFEKMAEVFVGIGKYG---SPDACTFNILIHAACLCGDLDDVWEVFDEMQ 184
           + L+ L+   E     ++ +   K+     P+ C FNIL+   C  GD++  + V +EM+
Sbjct: 172 TCLNLLIDSGEVNLSRKLLL-YAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMK 231

Query: 185 KRGVN-PNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGE 244
           + G++ PN +T+ TL+  L  +S  KEA++L EDM+      P+   +  +I  FC  GE
Sbjct: 232 RSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGE 291

Query: 245 LNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNA 304
           +  A K+ + M  N    +   YS L++   K G+ +E      E+ + G K +T+ Y  
Sbjct: 292 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 351

Query: 305 MINGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRG 364
           ++N  C+  +   A ++L EM    C+ D +++N I+ GL  E + ++A+ +L+     G
Sbjct: 352 LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 411

Query: 365 CSPDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMEL-L 424
              +  SYR + + LC   +L++A   L  M  +G  P   + N+LV RLC+    E+ +
Sbjct: 412 VHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGV 471

Query: 425 WMVLNSLGRGNVMNVDIWARVVAFVCKE-KLTEASELLDSLIN 460
            +++  L  G +     W  VV  +CKE KL    ELLDSL++
Sbjct: 472 RVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506

[Close]

BLAST of Tan0000289 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-52
Identity = 119/415 (28.67%), Postives = 216/415 (52.05%), Query Frame = 0


Query: 43  FRYSLLSYDLIITKLGRAKMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRA 102
           F   +LSY+ ++    R+K      E + +   E++ +P+   +  +I  +  A   D A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224

Query: 103 FHVFDKIPSFGCKRTVKSANSLLDALLKCSEFEKMAEVFVGIGKYG-SPDACTFNILIHA 162
             +FDK+ + GC   V + N+L+D   K  + +   ++   +   G  P+  ++N++I+ 
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284

Query: 163 ACLCGDLDDVWEVFDEMQKRGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLP 222
            C  G + +V  V  EM +RG + + VT+ TLI G     N  +AL +  +M+R +   P
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTP 344

Query: 223 NASIYATLIKAFCGIGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDIL 282
           +   Y +LI + C  G +N A +  ++M    +  +   Y+TL+    + G   E   +L
Sbjct: 345 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 404

Query: 283 GEMGENGCKPNTITYNAMINGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKE 342
            EM +NG  P+ +TYNA+INGHC     + A  VL++M EKG  PDV+S++T++ G C+ 
Sbjct: 405 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 464

Query: 343 RKWDKAMDLLEDMPRRGCSPDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESI 402
              D+A+ +  +M  +G  PD ++Y +L  G CE  + +EA  + +EM+  G  P   + 
Sbjct: 465 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 524

Query: 403 NKLVDRLCQECNMELLWMVLNSL-GRGNVMNVDIWARVVAFVCKEKLT-EASELL 455
             L++  C E ++E    + N +  +G + +V  ++ ++  + K+  T EA  LL
Sbjct: 525 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578

[Close]

BLAST of Tan0000289 vs. ExPASy Swiss-Prot
Match: Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.9e-51
Identity = 136/408 (33.33%), Postives = 201/408 (49.26%), Query Frame = 0


Query: 3   THKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKM 62
           T KP       + L+   DP+ A  LF             FR+   SY  +I KL +++ 
Sbjct: 43  TRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMG------FRHDYPSYSSLIYKLAKSRN 102

Query: 63  FHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKSAN 122
           F  +++IL +L +       E +F  +I  YG+A   D+A  VF KI SF C RT++S N
Sbjct: 103 FDAVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLN 162

Query: 123 SLLDALLKCSEFEKMAEVFVGIGKYG-SPDACTFNILIHAACLCGDLDDVWEVFDEMQKR 182
           +L++ L+   E EK    F G       P++ +FNILI       D +   +VFDEM + 
Sbjct: 163 TLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEM 222

Query: 183 GVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELNL 242
            V P+VVT+ +LI  L  N ++ +A  L EDM++  R  PNA  +  L+K  C  GE N 
Sbjct: 223 EVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNE 282

Query: 243 AFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMIN 302
           A KL  +M     K     Y  L+S L K GR +E   +LGEM +   KP+ + YN ++N
Sbjct: 283 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 342

Query: 303 GHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCSP 362
             C E     AYRVL EM  KGCKP+  ++  +I G C+   +D  +++L  M      P
Sbjct: 343 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 402

Query: 363 DVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLC 410
              ++  +  GL +   L  A  +L+ M  K     S +   L+  LC
Sbjct: 403 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442

[Close]

BLAST of Tan0000289 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.4e-47
Identity = 114/412 (27.67%), Postives = 220/412 (53.40%), Query Frame = 0


Query: 9   PFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKMFHEMEE 68
           P RL S++  Q +  LA Q+F      + K    F ++  +Y  I+ KL RA+ F  +E 
Sbjct: 49  PKRLVSMITQQQNIDLALQIFL----YAGKSHPGFTHNYDTYHSILFKLSRARAFDPVES 108

Query: 69  ILHQLKQETRFAP---HEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKSANSLL 128
           ++  L+    + P    E +F +++  YG A   + +  +F +IP FG KR+V+S N+LL
Sbjct: 109 LMADLRNS--YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 168

Query: 129 DALLKCSEFEKMAEVFVGIGK-YG-SPDACTFNILIHAACLCGDLDDVWEVFDEMQKRGV 188
           + L++   F+ +  +F    + +G +P+  T N+L+ A C   D++  ++V DE+   G+
Sbjct: 169 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 228

Query: 189 NPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELNLAF 248
            PN+VT+ T++ G     +++ A ++ E+M+      P+A+ Y  L+  +C +G  + A 
Sbjct: 229 VPNLVTYTTILGGYVARGDMESAKRVLEEMLD-RGWYPDATTYTVLMDGYCKLGRFSEAA 288

Query: 249 KLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMINGH 308
            + ++M  N+++ +   Y  +I AL K  +  E  ++  EM E    P++     +I+  
Sbjct: 289 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 348

Query: 309 CKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCSPDV 368
           C+++    A  +  +M++  C PD    +T+I  LCKE +  +A  L ++   +G  P +
Sbjct: 349 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSL 408

Query: 369 VSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNME 416
           ++Y TL  G+CE  +L EA  + D+M  +  +P + + N L++ L +  N++
Sbjct: 409 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452

[Close]

BLAST of Tan0000289 vs. NCBI nr
Match: XP_022941521.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita moschata])

HSP 1 Score: 847.0 bits (2187), Expect = 7.4e-242
Identity = 415/459 (90.41%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHK ISPFRLCSLLRLQ DPKLAFQLF NPNPSS+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 19  MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 78

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRFAPHEIIFCNVISFYGRARL DRAF VFDKIPSFGCKRTVKS
Sbjct: 79  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 138

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFVGIG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 139 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 198

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCG G+LN
Sbjct: 199 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGSGDLN 258

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV  IL EMGENGCKP+T+TYNAMI
Sbjct: 259 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMI 318

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+G LCKE KWDKAMDLL DMPRRGCS
Sbjct: 319 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCS 378

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKLVDRLCQE NMELLWMV
Sbjct: 379 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLVDRLCQESNMELLWMV 438

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           +NSL RGNVMNVDIWARVVAFVCKEK +EAS+L D LI+
Sbjct: 439 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 477

[Close]

BLAST of Tan0000289 vs. NCBI nr
Match: KAG6607949.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 844.7 bits (2181), Expect = 3.7e-241
Identity = 414/459 (90.20%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKT K ISPFRLCSLLRLQ DPKLAFQLF NPNPSS+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRFAPHEIIFCNVISFYGRARL DRAF VFDKIPSFGCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFVGIG YGSPDAC+FNILIHAACLCGDLDD WEVFDEM K
Sbjct: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACSFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCGIG+LN
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLN 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV  IL EMGENGCKP+T+TYNAMI
Sbjct: 241 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+G LCKE KWDKAMDLL DMPRRGCS
Sbjct: 301 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKLVDRLCQE NMELLWMV
Sbjct: 361 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLVDRLCQESNMELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           +NSL RGNVMNVDIWARVVAFVCKEK +EAS+L D LI+
Sbjct: 421 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 459

[Close]

BLAST of Tan0000289 vs. NCBI nr
Match: KAG7037464.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 844.3 bits (2180), Expect = 4.8e-241
Identity = 413/459 (89.98%), Postives = 427/459 (93.03%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKT K ISPFRLCSLLRLQ DPKLAFQLF NPNPSS+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTQKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRFAPHEIIFCNVISFYGRARL DRAF VFDKIPSFGCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFVGIG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 121 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RG  PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCGIG+LN
Sbjct: 181 RGAKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLN 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISA FKHGRKEEV +IL EMGENGCKP+T+TYNAMI
Sbjct: 241 LAFKLKEEMVTNKVKLDSAIYSTFISAFFKHGRKEEVPEILAEMGENGCKPDTVTYNAMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+G LCKE KWDKAMDLL DMPRRGCS
Sbjct: 301 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKLVDRLCQE NMELLWMV
Sbjct: 361 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLVDRLCQESNMELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           +NSL RGNVMNVDIWARVVAFVCKEK +EAS+L D LI+
Sbjct: 421 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 459

[Close]

BLAST of Tan0000289 vs. NCBI nr
Match: XP_022982178.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita maxima])

HSP 1 Score: 842.4 bits (2175), Expect = 1.8e-240
Identity = 410/459 (89.32%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHK ISPFRLCSLLRLQ DPKLAFQLF NPNP+S+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPNSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRF+PHEIIFCNVISFYGRARL DRAF VFDKIPS+GCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFSPHEIIFCNVISFYGRARLLDRAFQVFDKIPSYGCKRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFE+MAEVFVGIG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 121 ANSLLDALLKCREFERMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCGIG+LN
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLN 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV +IL EMGENGCKP+T+TYN MI
Sbjct: 241 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPEILAEMGENGCKPDTVTYNTMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+  LCKE KWDKAMDLL DMPRRGCS
Sbjct: 301 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMERLCKEGKWDKAMDLLADMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKL+DRLCQE NMELLWMV
Sbjct: 361 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLIDRLCQESNMELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
            NSLGRGNVMNVDIWARVVAFVCKEK +EAS+L+D LI+
Sbjct: 421 ANSLGRGNVMNVDIWARVVAFVCKEKPSEASKLVDLLIS 459

[Close]

BLAST of Tan0000289 vs. NCBI nr
Match: XP_023523314.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 840.9 bits (2171), Expect = 5.3e-240
Identity = 411/459 (89.54%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHK ISPFRLCSLLRLQ DPKLAFQLF NPNPSS+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRFAP+EIIFCNVISFYGRARL DRAF VFDKIPS+GCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFAPNEIIFCNVISFYGRARLLDRAFQVFDKIPSYGCKRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFV IG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 121 ANSLLDALLKCREFEKMAEVFVSIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVY  LPNASIYATLIK FCGIG+LN
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYGILPNASIYATLIKGFCGIGDLN 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV +IL EMGENGCKP+T+TYNAMI
Sbjct: 241 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPEILAEMGENGCKPDTVTYNAMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAY+VLDEMV+KGCKPDVISFNTI+G LCKE KWDKAMDLL DMPRRGCS
Sbjct: 301 NGQCKENDLESAYKVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKL+DRLCQE NMELLWMV
Sbjct: 361 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLIDRLCQESNMELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           LNSLGRGNVMNVDIWARVVAFVCK K +EAS+L D LI+
Sbjct: 421 LNSLGRGNVMNVDIWARVVAFVCKVKASEASKLCDLLIS 459

[Close]

BLAST of Tan0000289 vs. ExPASy TrEMBL
Match: A0A6J1FLC2 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita moschata OX=3662 GN=LOC111446799 PE=4 SV=1)

HSP 1 Score: 847.0 bits (2187), Expect = 3.6e-242
Identity = 415/459 (90.41%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHK ISPFRLCSLLRLQ DPKLAFQLF NPNPSS+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 19  MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPSSTKPPKPFRYSLLSYDLIITKLGRA 78

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRFAPHEIIFCNVISFYGRARL DRAF VFDKIPSFGCKRTVKS
Sbjct: 79  KMFDEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLLDRAFQVFDKIPSFGCKRTVKS 138

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFVGIG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 139 ANSLLDALLKCREFEKMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 198

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCG G+LN
Sbjct: 199 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGSGDLN 258

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV  IL EMGENGCKP+T+TYNAMI
Sbjct: 259 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMI 318

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+G LCKE KWDKAMDLL DMPRRGCS
Sbjct: 319 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCS 378

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKLVDRLCQE NMELLWMV
Sbjct: 379 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLVDRLCQESNMELLWMV 438

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           +NSL RGNVMNVDIWARVVAFVCKEK +EAS+L D LI+
Sbjct: 439 VNSLARGNVMNVDIWARVVAFVCKEKASEASKLCDLLIS 477

[Close]

BLAST of Tan0000289 vs. ExPASy TrEMBL
Match: A0A6J1J467 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxima OX=3661 GN=LOC111481084 PE=4 SV=1)

HSP 1 Score: 842.4 bits (2175), Expect = 8.8e-241
Identity = 410/459 (89.32%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHK ISPFRLCSLLRLQ DPKLAFQLF NPNP+S+KPPKPFRYSLLSYDLIITKLGRA
Sbjct: 1   MKTHKLISPFRLCSLLRLQKDPKLAFQLFLNPNPNSTKPPKPFRYSLLSYDLIITKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEILHQLKQETRF+PHEIIFCNVISFYGRARL DRAF VFDKIPS+GCKRTVKS
Sbjct: 61  KMFDEMEEILHQLKQETRFSPHEIIFCNVISFYGRARLLDRAFQVFDKIPSYGCKRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFE+MAEVFVGIG YGSPDACTFNILIHAACLCGDLDD WEVFDEM K
Sbjct: 121 ANSLLDALLKCREFERMAEVFVGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS L EAL+LKEDMVRVYR LPNASIYATLIK FCGIG+LN
Sbjct: 181 RGVKPNVVTFGTLIYGLSLNSKLDEALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLN 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAFKLKEEMVTNKVKLDSAIYST ISALFKHGRKEEV +IL EMGENGCKP+T+TYN MI
Sbjct: 241 LAFKLKEEMVTNKVKLDSAIYSTFISALFKHGRKEEVPEILAEMGENGCKPDTVTYNTMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG CKEND +SAYRVLDEMV+KGCKPDVISFNTI+  LCKE KWDKAMDLL DMPRRGCS
Sbjct: 301 NGQCKENDLESAYRVLDEMVKKGCKPDVISFNTIMERLCKEGKWDKAMDLLADMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE+MQLQEATSILDEMIFKGY PRSESINKL+DRLCQE NMELLWMV
Sbjct: 361 PDVVSYRTLFDGLCEMMQLQEATSILDEMIFKGYVPRSESINKLIDRLCQESNMELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
            NSLGRGNVMNVDIWARVVAFVCKEK +EAS+L+D LI+
Sbjct: 421 ANSLGRGNVMNVDIWARVVAFVCKEKPSEASKLVDLLIS 459

[Close]

BLAST of Tan0000289 vs. ExPASy TrEMBL
Match: A0A6J1BRW9 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica charantia OX=3673 GN=LOC111004838 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 2.2e-231
Identity = 390/459 (84.97%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKTHKPISPFRLCSLLRLQ DPK+AFQ FQ+PNPS++KPPKPFRYSLLSYDLII+KLGRA
Sbjct: 1   MKTHKPISPFRLCSLLRLQKDPKIAFQHFQSPNPSAAKPPKPFRYSLLSYDLIISKLGRA 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           K+F EME++L QLKQETRFAP EIIFCNVISFYGRARLPDRAF VF++IPSFGC RTVKS
Sbjct: 61  KLFDEMEQVLLQLKQETRFAPSEIIFCNVISFYGRARLPDRAFQVFERIPSFGCNRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
           ANSLLDALLKC EFEKMAEVFVGIG YGSPDACTFNILIHAA LCG+ DD WEVFDEM+K
Sbjct: 121 ANSLLDALLKCREFEKMAEVFVGIGSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RG++PNVVTFGTLIYGLSLNS LKEALKLKEDMVRV   LPNASIYATLIK FCGIGEL 
Sbjct: 181 RGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELI 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
           LAF+LKEEMVT+KVK+DSAIYSTLISALFKHGRKEEV DILGEM ENGCKP+T+TYNAMI
Sbjct: 241 LAFELKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           +GHCKEND +SA+RVLDEMVEKGCKPDVISFN+IIG LCK+ KW++A+DLLEDMPRRGCS
Sbjct: 301 SGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDVVSYRTLFDGLCE MQLQ+ATSILDEMIFKGY PRSESINKLVD LCQEC++ELLWMV
Sbjct: 361 PDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQECDVELLWMV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           L+SLGRGN MN+D WARV+A VCKE ++EAS+L+DSL++
Sbjct: 421 LDSLGRGNAMNMDTWARVIALVCKENMSEASKLVDSLVS 459

[Close]

BLAST of Tan0000289 vs. ExPASy TrEMBL
Match: A0A5A7VBA5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004190 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 3.8e-228
Identity = 391/459 (85.19%), Postives = 417/459 (90.85%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKT KPISPFRL SLLRL+ DPKLA QLF NPNPSSS+PPKPFRYSLLSYDLII+KLGRA
Sbjct: 19  MKTQKPISPFRLSSLLRLEKDPKLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 78

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEIL QLKQETRFAPHE+IFCNVI+FYGRARLPDRAF VF++IP+F CKRTVKS
Sbjct: 79  KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRARLPDRAFQVFERIPTFRCKRTVKS 138

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
            NSLLDALLK  EF KM EV VGIG +GSPDACTFNILIHAACLCGDLD VW VFDEM+K
Sbjct: 139 VNSLLDALLKSREFGKMMEVLVGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRK 198

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS LKEAL+LKEDMVRVY   PNASIY TLIK FCG+GELN
Sbjct: 199 RGVQPNVVTFGTLIYGLSLNSKLKEALRLKEDMVRVYMIKPNASIYTTLIKGFCGVGELN 258

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
            AFKLKEEMVT+KVKLDS IYSTLISALFKHGRKEEVSDIL EMGENGCKP+T TYNAMI
Sbjct: 259 FAFKLKEEMVTSKVKLDSKIYSTLISALFKHGRKEEVSDILREMGENGCKPDTATYNAMI 318

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NGHCKEND +SA RV+DEMVEKGCKPDVISFNTIIGGLCKE K DKAMDLLEDMPRRGC 
Sbjct: 319 NGHCKENDLESANRVVDEMVEKGCKPDVISFNTIIGGLCKEGKLDKAMDLLEDMPRRGCP 378

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCE+MQL+EATSILDEMIFKGY PR+ESINKLVDRLCQECNMELLWMV
Sbjct: 379 PDVLSYRIVFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMV 438

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           LNSLGRGN MN+D WARVVAF+ KE L E+S L+DSLI+
Sbjct: 439 LNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS 477

[Close]

BLAST of Tan0000289 vs. ExPASy TrEMBL
Match: A0A1S3BT71 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo OX=3656 GN=LOC103493464 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 3.8e-228
Identity = 391/459 (85.19%), Postives = 417/459 (90.85%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           MKT KPISPFRL SLLRL+ DPKLA QLF NPNPSSS+PPKPFRYSLLSYDLII+KLGRA
Sbjct: 67  MKTQKPISPFRLSSLLRLEKDPKLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRA 126

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF EMEEIL QLKQETRFAPHE+IFCNVI+FYGRARLPDRAF VF++IP+F CKRTVKS
Sbjct: 127 KMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRARLPDRAFQVFERIPTFRCKRTVKS 186

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
            NSLLDALLK  EF KM EV VGIG +GSPDACTFNILIHAACLCGDLD VW VFDEM+K
Sbjct: 187 VNSLLDALLKSREFGKMMEVLVGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRK 246

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           RGV PNVVTFGTLIYGLSLNS LKEAL+LKEDMVRVY   PNASIY TLIK FCG+GELN
Sbjct: 247 RGVQPNVVTFGTLIYGLSLNSKLKEALRLKEDMVRVYMIKPNASIYTTLIKGFCGVGELN 306

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
            AFKLKEEMVT+KVKLDS IYSTLISALFKHGRKEEVSDIL EMGENGCKP+T TYNAMI
Sbjct: 307 FAFKLKEEMVTSKVKLDSKIYSTLISALFKHGRKEEVSDILREMGENGCKPDTATYNAMI 366

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NGHCKEND +SA RV+DEMVEKGCKPDVISFNTIIGGLCKE K DKAMDLLEDMPRRGC 
Sbjct: 367 NGHCKENDLESANRVVDEMVEKGCKPDVISFNTIIGGLCKEGKLDKAMDLLEDMPRRGCP 426

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PDV+SYR +FDGLCE+MQL+EATSILDEMIFKGY PR+ESINKLVDRLCQECNMELLWMV
Sbjct: 427 PDVLSYRIVFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMV 486

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           LNSLGRGN MN+D WARVVAF+ KE L E+S L+DSLI+
Sbjct: 487 LNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS 525

[Close]

BLAST of Tan0000289 vs. TAIR 10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 542.7 bits (1397), Expect = 2.8e-154
Identity = 261/459 (56.86%), Postives = 337/459 (73.42%), Query Frame = 0


Query: 1   MKTHKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRA 60
           M   K +S FRL SLLR +NDP  A +LF+NP+P S+ P +PFRYSLL YD+IITKLG +
Sbjct: 1   MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGS 60

Query: 61  KMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKS 120
           KMF E++++L  LK +TR  P EIIFCNVI+F+GR +LP RA H+FD++P + C+RTVKS
Sbjct: 61  KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120

Query: 121 ANSLLDALLKCSEFEKMAEVFVGIGKYGSPDACTFNILIHAACLCGDLDDVWEVFDEMQK 180
            NSLL ALLKC E EKM E    I ++G PDACT+NILIH     G  DD  ++FDEM K
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180

Query: 181 RGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELN 240
           + V P  VTFGTLI+GL  +S +KEALK+K DM++VY   P   IYA+LIKA C IGEL+
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELS 240

Query: 241 LAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMI 300
            AFKLK+E    K+K+D+AIYSTLIS+L K GR  EVS IL EM E GCKP+T+TYN +I
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300

Query: 301 NGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCS 360
           NG C END +SA RVLDEMVEKG KPDVIS+N I+G   + +KW++A  L EDMPRRGCS
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360

Query: 361 PDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMELLWMV 420
           PD +SYR +FDGLCE +Q +EA  ILDEM+FKGY+PR + +   + +LC+   +E+L  V
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKV 420

Query: 421 LNSLGRGNVMNVDIWARVVAFVCKEKLTEASELLDSLIN 460
           ++SL RG   + D+W+ ++  +CKE +   S+ +D L+N
Sbjct: 421 ISSLHRGIAGDADVWSVMIPTMCKEPV--ISDSIDLLLN 457

[Close]

BLAST of Tan0000289 vs. TAIR 10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 9.5e-54
Identity = 135/463 (29.16%), Postives = 238/463 (51.40%), Query Frame = 0


Query: 5   KPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKMFH 64
           K IS     SL++ + DP+    +F     + +   K F ++  +Y +++  L R K F 
Sbjct: 52  KFISHESAVSLMKRERDPQGVLDIF-----NKASQQKGFNHNNATYSVLLDNLVRHKKFL 111

Query: 65  EMEEILHQLKQET-RFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFG-CKRTVKSAN 124
            ++ ILHQ+K ET RF   E +F N++  + R+ L D+   +F+ I      K ++ + +
Sbjct: 112 AVDAILHQMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIS 171

Query: 125 SLLDALLKCSEFEKMAEVFVGIGKYG---SPDACTFNILIHAACLCGDLDDVWEVFDEMQ 184
           + L+ L+   E     ++ +   K+     P+ C FNIL+   C  GD++  + V +EM+
Sbjct: 172 TCLNLLIDSGEVNLSRKLLL-YAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMK 231

Query: 185 KRGVN-PNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGE 244
           + G++ PN +T+ TL+  L  +S  KEA++L EDM+      P+   +  +I  FC  GE
Sbjct: 232 RSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGE 291

Query: 245 LNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNA 304
           +  A K+ + M  N    +   YS L++   K G+ +E      E+ + G K +T+ Y  
Sbjct: 292 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 351

Query: 305 MINGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRG 364
           ++N  C+  +   A ++L EM    C+ D +++N I+ GL  E + ++A+ +L+     G
Sbjct: 352 LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 411

Query: 365 CSPDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNMEL-L 424
              +  SYR + + LC   +L++A   L  M  +G  P   + N+LV RLC+    E+ +
Sbjct: 412 VHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGV 471

Query: 425 WMVLNSLGRGNVMNVDIWARVVAFVCKE-KLTEASELLDSLIN 460
            +++  L  G +     W  VV  +CKE KL    ELLDSL++
Sbjct: 472 RVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506

[Close]

BLAST of Tan0000289 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-53
Identity = 119/415 (28.67%), Postives = 216/415 (52.05%), Query Frame = 0


Query: 43  FRYSLLSYDLIITKLGRAKMFHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRA 102
           F   +LSY+ ++    R+K      E + +   E++ +P+   +  +I  +  A   D A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224

Query: 103 FHVFDKIPSFGCKRTVKSANSLLDALLKCSEFEKMAEVFVGIGKYG-SPDACTFNILIHA 162
             +FDK+ + GC   V + N+L+D   K  + +   ++   +   G  P+  ++N++I+ 
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284

Query: 163 ACLCGDLDDVWEVFDEMQKRGVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLP 222
            C  G + +V  V  EM +RG + + VT+ TLI G     N  +AL +  +M+R +   P
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTP 344

Query: 223 NASIYATLIKAFCGIGELNLAFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDIL 282
           +   Y +LI + C  G +N A +  ++M    +  +   Y+TL+    + G   E   +L
Sbjct: 345 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 404

Query: 283 GEMGENGCKPNTITYNAMINGHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKE 342
            EM +NG  P+ +TYNA+INGHC     + A  VL++M EKG  PDV+S++T++ G C+ 
Sbjct: 405 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 464

Query: 343 RKWDKAMDLLEDMPRRGCSPDVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESI 402
              D+A+ +  +M  +G  PD ++Y +L  G CE  + +EA  + +EM+  G  P   + 
Sbjct: 465 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 524

Query: 403 NKLVDRLCQECNMELLWMVLNSL-GRGNVMNVDIWARVVAFVCKEKLT-EASELL 455
             L++  C E ++E    + N +  +G + +V  ++ ++  + K+  T EA  LL
Sbjct: 525 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578

[Close]

BLAST of Tan0000289 vs. TAIR 10
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-52
Identity = 136/408 (33.33%), Postives = 201/408 (49.26%), Query Frame = 0


Query: 3   THKPISPFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKM 62
           T KP       + L+   DP+ A  LF             FR+   SY  +I KL +++ 
Sbjct: 43  TRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMG------FRHDYPSYSSLIYKLAKSRN 102

Query: 63  FHEMEEILHQLKQETRFAPHEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKSAN 122
           F  +++IL +L +       E +F  +I  YG+A   D+A  VF KI SF C RT++S N
Sbjct: 103 FDAVDQIL-RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLN 162

Query: 123 SLLDALLKCSEFEKMAEVFVGIGKYG-SPDACTFNILIHAACLCGDLDDVWEVFDEMQKR 182
           +L++ L+   E EK    F G       P++ +FNILI       D +   +VFDEM + 
Sbjct: 163 TLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEM 222

Query: 183 GVNPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELNL 242
            V P+VVT+ +LI  L  N ++ +A  L EDM++  R  PNA  +  L+K  C  GE N 
Sbjct: 223 EVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK-KRIRPNAVTFGLLMKGLCCKGEYNE 282

Query: 243 AFKLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMIN 302
           A KL  +M     K     Y  L+S L K GR +E   +LGEM +   KP+ + YN ++N
Sbjct: 283 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 342

Query: 303 GHCKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCSP 362
             C E     AYRVL EM  KGCKP+  ++  +I G C+   +D  +++L  M      P
Sbjct: 343 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 402

Query: 363 DVVSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLC 410
              ++  +  GL +   L  A  +L+ M  K     S +   L+  LC
Sbjct: 403 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442

[Close]

BLAST of Tan0000289 vs. TAIR 10
Match: AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 6.0e-48
Identity = 114/412 (27.67%), Postives = 220/412 (53.40%), Query Frame = 0


Query: 9   PFRLCSLLRLQNDPKLAFQLFQNPNPSSSKPPKPFRYSLLSYDLIITKLGRAKMFHEMEE 68
           P RL S++  Q +  LA Q+F      + K    F ++  +Y  I+ KL RA+ F  +E 
Sbjct: 49  PKRLVSMITQQQNIDLALQIFL----YAGKSHPGFTHNYDTYHSILFKLSRARAFDPVES 108

Query: 69  ILHQLKQETRFAP---HEIIFCNVISFYGRARLPDRAFHVFDKIPSFGCKRTVKSANSLL 128
           ++  L+    + P    E +F +++  YG A   + +  +F +IP FG KR+V+S N+LL
Sbjct: 109 LMADLRNS--YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 168

Query: 129 DALLKCSEFEKMAEVFVGIGK-YG-SPDACTFNILIHAACLCGDLDDVWEVFDEMQKRGV 188
           + L++   F+ +  +F    + +G +P+  T N+L+ A C   D++  ++V DE+   G+
Sbjct: 169 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 228

Query: 189 NPNVVTFGTLIYGLSLNSNLKEALKLKEDMVRVYRTLPNASIYATLIKAFCGIGELNLAF 248
            PN+VT+ T++ G     +++ A ++ E+M+      P+A+ Y  L+  +C +G  + A 
Sbjct: 229 VPNLVTYTTILGGYVARGDMESAKRVLEEMLD-RGWYPDATTYTVLMDGYCKLGRFSEAA 288

Query: 249 KLKEEMVTNKVKLDSAIYSTLISALFKHGRKEEVSDILGEMGENGCKPNTITYNAMINGH 308
            + ++M  N+++ +   Y  +I AL K  +  E  ++  EM E    P++     +I+  
Sbjct: 289 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 348

Query: 309 CKENDFKSAYRVLDEMVEKGCKPDVISFNTIIGGLCKERKWDKAMDLLEDMPRRGCSPDV 368
           C+++    A  +  +M++  C PD    +T+I  LCKE +  +A  L ++   +G  P +
Sbjct: 349 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSL 408

Query: 369 VSYRTLFDGLCEIMQLQEATSILDEMIFKGYEPRSESINKLVDRLCQECNME 416
           ++Y TL  G+CE  +L EA  + D+M  +  +P + + N L++ L +  N++
Sbjct: 409 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452

The following BLAST results are available for this feature:

BLAST of Tan0000289 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAG8	3.9e-153	56.86	Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th...	[more]
Q3E9F0	1.3e-52	29.16	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	1.7e-52	28.67	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LQQ1	1.9e-51	33.33	Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop...	[more]
Q9FFE3	8.4e-47	27.67	Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop...	[more]

BLAST of Tan0000289 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941521.1	7.4e-242	90.41	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53...	[more]
KAG6607949.1	3.7e-241	90.20	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
KAG7037464.1	4.8e-241	89.98	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022982178.1	1.8e-240	89.32	putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita maxima...	[more]
XP_023523314.1	5.3e-240	89.54	putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo s...	[more]

BLAST of Tan0000289 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLC2	3.6e-242	90.41	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53...	[more]
A0A6J1J467	8.8e-241	89.32	putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxi...	[more]
A0A6J1BRW9	2.2e-231	84.97	putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica char...	[more]
A0A5A7VBA5	3.8e-228	85.19	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3BT71	3.8e-228	85.19	putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo O...	[more]

BLAST of Tan0000289 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53330.1	2.8e-154	56.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G18475.1	9.5e-54	29.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	1.2e-53	28.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G07740.1	1.4e-52	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G16420.1	6.0e-48	27.67	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 447..459
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..457
None	No IPR available	PANTHER	PTHR47933:SF24	OS05G0207200 PROTEIN	coord: 1..457
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 319..459 e-value: 1.6E-30 score: 108.6 coord: 147..249 e-value: 3.8E-26 score: 94.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..146 e-value: 1.7E-14 score: 55.7 coord: 250..318 e-value: 9.1E-20 score: 73.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 291..340 e-value: 6.4E-20 score: 71.1 coord: 150..197 e-value: 4.7E-15 score: 55.5
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 357..389 e-value: 7.8E-8 score: 31.9 coord: 221..250 e-value: 7.7E-6 score: 25.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 364..396 e-value: 2.6E-4 score: 19.0 coord: 294..328 e-value: 7.2E-13 score: 45.9 coord: 153..187 e-value: 3.9E-10 score: 37.3 coord: 329..363 e-value: 1.1E-11 score: 42.1 coord: 85..117 e-value: 0.0012 score: 16.9 coord: 260..293 e-value: 1.5E-7 score: 29.1 coord: 225..257 e-value: 1.2E-4 score: 20.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 85..114 e-value: 0.043 score: 14.1 coord: 260..289 e-value: 2.1E-5 score: 24.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 222..256 score: 9.426776
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 151..185 score: 13.26323
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 362..396 score: 11.049048
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 13.898986
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 14.403206
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 257..291 score: 11.761533

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000289.1	Tan0000289.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0048364	root development
biological_process	GO:0048367	shoot system development
molecular_function	GO:0005515	protein binding