Tan0000260 (gene) Snake gourd v1

Overview


Name	Tan0000260
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG01: 29726814 .. 29729443 (-)
RNA-Seq Expression	Tan0000260
Synteny	Tan0000260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTATGAACTTATTTGAAATTTTTTAAATTTATGAACTAATCAAAACAAAAAATGTTTGAAATGTCAGAAGAACTAATCATACCGTTTAATTAATTAAAATATTATAATCTCGAGGAAGAATTCAGATATTCAAATTCTAATCCACAATTTCCAGCCGCCCGACATGTCGTTTATATTGGAATTTGGAATCGAAATCTATGGCTGCAAGCCGAAACAGAGATCGACACAAGGGAAGGGTAAAAAAATCATAACTTCCAAGAGCAACGACGTCTCTATCAGTCTCAGATTCTTCCACTGTTTGATCGCTCGAAACCAACAGCGCTTCCATTCAAATTCCCCCAAGGGATGATTGGAATTTCAAAGCCTTTCGCCGAAACAAAGTTCACTTGAATCTTTTGGTGATGTGGGCGCTTCGGACTCCTCAATCTACCCAATATCCACCTTCTTCTCGTCGCCGTTGCTCGTCTCATTCCACTTCAAAACCCTCCGTTTGTTCCGTCGCCTTAAACCCTTCAACCGCCGCAAACCCAAATAAGAATCAGTTGATTCAATCACTATGCAAACAGGGCAATCTCAAGCAAGCCCTTTTGCTCCTCTCCCACGAATCCAATCCTACCCAACAAACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCATTGACGTTCATCGACACCTCGTCGATGGGGGGTTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTCTCTGAATTGGACTCTGTAGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGCTGTTTAGAGCTCTTGCTTTGGCAGGTCATGGAAAAGAGGTACTGGAATTGTATGCCCGGATGAATATGGTGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCCGAGTGTTTGGTTTCACTTCTCCAGAAGGGTAAGGAGATTCATGCGCATATTTTGAGACATGGGTATGAAGCTCATGTTCATGTAATGACTACACTGGTGGATATGTATGCAAGGTTTGGGTGTGTTTCGTATGCCAATGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCCTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAACACCCACGATTCAGTACCAAATTCCGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCTCTGGAGCAAGGGAAGCTTATCCATGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTAAGTTGGGCCAACTAGTTTTTGACCGCATGCATAAGAGAGATGTTGTCTTATGGAATTCTTTGATTTCGAGTTATGGTGTTCATGGACATGGAAGGAAAGCGATTGAAATTTTCGAAGAGATGATTGATAATGGAGTCTCACCTAGTTACGTTTCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAAGGAAAACAGTTGTTCGAGTCCATGGTAAAAGAACATGGTATACATCCTAGTGTGGAGCACTATGCTTGTATGGTTGATCTTCTCGGGCGTGCCAACCGGTTGGATGATGCAGCCAAGATTGTAGAAGATATGCGTACTGAACCAGGGCCTAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCTGAAAGAGCAAGTAAAAGGCTTTTCGAGCTTGAGCCAACGAATGCTGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTCGATTCTCGTGACCTGCAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCGTTTACGTCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTTCATGCCCTGTTAGTGAATTTGTCAAAGGAGATGAAGCAAAGAGGATATATACCACAAACTAAAGTGGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTTGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGATACCATAAGGATAACTAAGAATTTGAGGCTATGTGAAGATTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGATGGAGTTTGCTCTTGTGGAGATTATTGGTAGTATTTATGCAAATCCTTGTCTTATTCCTTTTTTTCTTTTAAAAAAATACCTATGTAATAATAACAGGTGATGCAACAGTTCTATTGGGCAGCTACATAGTTCAACACTTCACACACCTTGAGACTTGATTTCTGTAGACCTATAATTTTATTGAGATATCTTCTAGAAAAAAAATGTAAAAGAAGAGGCATAAATTGATGCCAAATTTAATTGAGCTGCCAATTCCTTTATGCCATATATGTGAGAGATCAAACCTCAAATTTA

mRNA sequence

CATTTATGAACTTATTTGAAATTTTTTAAATTTATGAACTAATCAAAACAAAAAATGTTTGAAATGTCAGAAGAACTAATCATACCGTTTAATTAATTAAAATATTATAATCTCGAGGAAGAATTCAGATATTCAAATTCTAATCCACAATTTCCAGCCGCCCGACATGTCGTTTATATTGGAATTTGGAATCGAAATCTATGGCTGCAAGCCGAAACAGAGATCGACACAAGGGAAGGGTAAAAAAATCATAACTTCCAAGAGCAACGACGTCTCTATCAGTCTCAGATTCTTCCACTGTTTGATCGCTCGAAACCAACAGCGCTTCCATTCAAATTCCCCCAAGGGATGATTGGAATTTCAAAGCCTTTCGCCGAAACAAAGTTCACTTGAATCTTTTGGTGATGTGGGCGCTTCGGACTCCTCAATCTACCCAATATCCACCTTCTTCTCGTCGCCGTTGCTCGTCTCATTCCACTTCAAAACCCTCCGTTTGTTCCGTCGCCTTAAACCCTTCAACCGCCGCAAACCCAAATAAGAATCAGTTGATTCAATCACTATGCAAACAGGGCAATCTCAAGCAAGCCCTTTTGCTCCTCTCCCACGAATCCAATCCTACCCAACAAACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCATTGACGTTCATCGACACCTCGTCGATGGGGGGTTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTCTCTGAATTGGACTCTGTAGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGCTGTTTAGAGCTCTTGCTTTGGCAGGTCATGGAAAAGAGGTACTGGAATTGTATGCCCGGATGAATATGGTGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCCGAGTGTTTGGTTTCACTTCTCCAGAAGGGTAAGGAGATTCATGCGCATATTTTGAGACATGGGTATGAAGCTCATGTTCATGTAATGACTACACTGGTGGATATGTATGCAAGGTTTGGGTGTGTTTCGTATGCCAATGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCCTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAACACCCACGATTCAGTACCAAATTCCGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCTCTGGAGCAAGGGAAGCTTATCCATGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTAAGTTGGGCCAACTAGTTTTTGACCGCATGCATAAGAGAGATGTTGTCTTATGGAATTCTTTGATTTCGAGTTATGGTGTTCATGGACATGGAAGGAAAGCGATTGAAATTTTCGAAGAGATGATTGATAATGGAGTCTCACCTAGTTACGTTTCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAAGGAAAACAGTTGTTCGAGTCCATGGTAAAAGAACATGGTATACATCCTAGTGTGGAGCACTATGCTTGTATGGTTGATCTTCTCGGGCGTGCCAACCGGTTGGATGATGCAGCCAAGATTGTAGAAGATATGCGTACTGAACCAGGGCCTAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCTGAAAGAGCAAGTAAAAGGCTTTTCGAGCTTGAGCCAACGAATGCTGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTCGATTCTCGTGACCTGCAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCGTTTACGTCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTTCATGCCCTGTTAGTGAATTTGTCAAAGGAGATGAAGCAAAGAGGATATATACCACAAACTAAAGTGGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTTGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGATACCATAAGGATAACTAAGAATTTGAGGCTATGTGAAGATTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGATGGAGTTTGCTCTTGTGGAGATTATTGGTAGTATTTATGCAAATCCTTGTCTTATTCCTTTTTTTCTTTTAAAAAAATACCTATGTAATAATAACAGGTGATGCAACAGTTCTATTGGGCAGCTACATAGTTCAACACTTCACACACCTTGAGACTTGATTTCTGTAGACCTATAATTTTATTGAGATATCTTCTAGAAAAAAAATGTAAAAGAAGAGGCATAAATTGATGCCAAATTTAATTGAGCTGCCAATTCCTTTATGCCATATATGTGAGAGATCAAACCTCAAATTTA

Coding sequence (CDS)

ATGTGGGCGCTTCGGACTCCTCAATCTACCCAATATCCACCTTCTTCTCGTCGCCGTTGCTCGTCTCATTCCACTTCAAAACCCTCCGTTTGTTCCGTCGCCTTAAACCCTTCAACCGCCGCAAACCCAAATAAGAATCAGTTGATTCAATCACTATGCAAACAGGGCAATCTCAAGCAAGCCCTTTTGCTCCTCTCCCACGAATCCAATCCTACCCAACAAACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCATTGACGTTCATCGACACCTCGTCGATGGGGGGTTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTCTCTGAATTGGACTCTGTAGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGCTGTTTAGAGCTCTTGCTTTGGCAGGTCATGGAAAAGAGGTACTGGAATTGTATGCCCGGATGAATATGGTGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCCGAGTGTTTGGTTTCACTTCTCCAGAAGGGTAAGGAGATTCATGCGCATATTTTGAGACATGGGTATGAAGCTCATGTTCATGTAATGACTACACTGGTGGATATGTATGCAAGGTTTGGGTGTGTTTCGTATGCCAATGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCCTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAACACCCACGATTCAGTACCAAATTCCGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCTCTGGAGCAAGGGAAGCTTATCCATGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTAAGTTGGGCCAACTAGTTTTTGACCGCATGCATAAGAGAGATGTTGTCTTATGGAATTCTTTGATTTCGAGTTATGGTGTTCATGGACATGGAAGGAAAGCGATTGAAATTTTCGAAGAGATGATTGATAATGGAGTCTCACCTAGTTACGTTTCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAAGGAAAACAGTTGTTCGAGTCCATGGTAAAAGAACATGGTATACATCCTAGTGTGGAGCACTATGCTTGTATGGTTGATCTTCTCGGGCGTGCCAACCGGTTGGATGATGCAGCCAAGATTGTAGAAGATATGCGTACTGAACCAGGGCCTAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCTGAAAGAGCAAGTAAAAGGCTTTTCGAGCTTGAGCCAACGAATGCTGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTCGATTCTCGTGACCTGCAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCGTTTACGTCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTTCATGCCCTGTTAGTGAATTTGTCAAAGGAGATGAAGCAAAGAGGATATATACCACAAACTAAAGTGGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTTGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGATACCATAAGGATAACTAAGAATTTGAGGCTATGTGAAGATTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGATGGAGTTTGCTCTTGTGGAGATTATTGGTAG

Protein sequence

MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW

Homology

[Close]

BLAST of Tan0000260 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 999.6 bits (2583), Expect = 1.7e-290
Identity = 491/635 (77.32%), Postives = 555/635 (87.40%), Query Frame = 0


Query: 24  STSKPSVCSVAL-NPS----TAANPNKNQLIQSLCKQGNLKQALLLLSHESNPTQQTWEL 83
           S  KP  CSVAL NPS      A  + NQLIQSLCK+G LKQA+ +LS ES+P+QQT+EL
Sbjct: 23  SPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYEL 82

Query: 84  LILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRT 143
           LIL    R+SLSD + VHRH++D G DQDPFLATKLI M+S+L SVD ARKVFDKTRKRT
Sbjct: 83  LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142

Query: 144 IYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYLLKACVASECLVSLLQKGK 203
           IYVWNALFRAL LAGHG+EVL LY +MN +GV SDRFTYTY+LKACVASEC V+ L KGK
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202

Query: 204 EIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNG 263
           EIHAH+ R GY +HV++MTTLVDMYARFGCV YA+ VF  MPVRNVVSWSAMIACYAKNG
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262

Query: 264 KPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPV 323
           K +EAL  FREMM  T DS PNSVTMVSVLQACA+LAALEQGKLIH YILRRGLDSILPV
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322

Query: 324 ISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGV 383
           ISALVTMY RCGKL++GQ VFDRMH RDVV WNSLISSYGVHG+G+KAI+IFEEM+ NG 
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382

Query: 384 SPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAA 443
           SP+ V+FVSVLGACSH GLVEEGK+LFE+M ++HGI P +EHYACMVDLLGRANRLD+AA
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442

Query: 444 KIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAE 503
           K+V+DMRTEPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYVLLADIYAEA+
Sbjct: 443 KMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502

Query: 504 MWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMK 563
           MWDEVKRV+KLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP  EQ+HA LV L+++MK
Sbjct: 503 MWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562

Query: 564 QRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHS 623
           ++GYIPQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITKNLRLCEDCH 
Sbjct: 563 EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHL 622

Query: 624 VTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
            TKFISKF ++EI+VRDVNRFH FK+GVCSCGDYW
Sbjct: 623 FTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of Tan0000260 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.2e-136
Identity = 244/610 (40.00%), Postives = 378/610 (61.97%), Query Frame = 0


Query: 49  IQSLCKQGNLKQALL---LLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFD 108
           I  LC  G L++ALL   +L  E       ++ L+ +   + +L DG  VH H++   + 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMG--FHGYDALLNACLDKRALRDGQRVHAHMIKTRYL 86

Query: 109 QDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARM 168
              +L T+L+  + + D +++ARKV D+  ++ +  W A+    +  GH  E L ++A M
Sbjct: 87  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 146

Query: 169 NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYAR 228
                  + FT+  +L +C+ +    S L  GK+IH  I++  Y++H+ V ++L+DMYA+
Sbjct: 147 MRSDGKPNEFTFATVLTSCIRA----SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 206

Query: 229 FGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMV 288
            G +  A  +F+ +P R+VVS +A+IA YA+ G   EALE+F    L++    PN VT  
Sbjct: 207 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR--LHSEGMSPNYVTYA 266

Query: 289 SVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKR 348
           S+L A + LA L+ GK  H ++LRR L     + ++L+ MY++CG L   + +FD M +R
Sbjct: 267 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 326

Query: 349 DVVLWNSLISSYGVHGHGRKAIEIFEEMID-NGVSPSYVSFVSVLGACSHAGLVEEGKQL 408
             + WN+++  Y  HG GR+ +E+F  M D   V P  V+ ++VL  CSH  + + G  +
Sbjct: 327 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 386

Query: 409 FESMVK-EHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIH 468
           F+ MV  E+G  P  EHY C+VD+LGRA R+D+A + ++ M ++P   V GSLLGACR+H
Sbjct: 387 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 446

Query: 469 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSW 528
             V++ E   +RL E+EP NAGNYV+L+++YA A  W +V  VR ++  + + K PGRSW
Sbjct: 447 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 506

Query: 529 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVL 588
           I+  + ++ F + D  +P+ E++ A +  +S +MKQ GY+P    VLYD+DEE+KE+++L
Sbjct: 507 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 566

Query: 589 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 648
           GHSEKLA+ FGLI T +G  IR+ KNLR+C DCH+  K  SK  +RE+ +RD NRFH   
Sbjct: 567 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 626

Query: 649 DGVCSCGDYW 654
           DG+CSCGDYW
Sbjct: 627 DGICSCGDYW 628

[Close]

BLAST of Tan0000260 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 486.9 bits (1252), Expect = 3.6e-136
Identity = 251/625 (40.16%), Postives = 390/625 (62.40%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLS----HESNPTQQTWELLILSAARRNSLSDGIDVHRH-LV 105
           N ++ SLC+   L +AL  L         P + T   ++ + +    L  G ++H + L 
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 106 DGGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLE 165
           +G  D++ F+ + L++M+     V + R+VFD    R I +WNA+    +   H KE L 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 166 LYARM-NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTL 225
           L+  M    G+ ++  T   ++ ACV S        + + IH  +++ G +    V  TL
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRS----GAFSRKEAIHGFVVKRGLDRDRFVQNTL 450

Query: 226 VDMYARFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV- 285
           +DMY+R G +  A  +F +M  R++V+W+ MI  Y  +    +AL L  +M  N    V 
Sbjct: 451 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ-NLERKVS 510

Query: 286 ---------PNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARC 345
                    PNS+T++++L +CAAL+AL +GK IHAY ++  L + + V SALV MYA+C
Sbjct: 511 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 570

Query: 346 GKLKLGQLVFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVL 405
           G L++ + VFD++ +++V+ WN +I +YG+HG+G++AI++   M+  GV P+ V+F+SV 
Sbjct: 571 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 630

Query: 406 GACSHAGLVEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDM-RTEP 465
            ACSH+G+V+EG ++F  M  ++G+ PS +HYAC+VDLLGRA R+ +A +++  M R   
Sbjct: 631 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 690

Query: 466 GPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRK 525
               W SLLGA RIH ++E+ E A++ L +LEP  A +YVLLA+IY+ A +WD+   VR+
Sbjct: 691 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 750

Query: 526 LLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKV 585
            +  + ++K PG SWIE   +++ F + D  +PQ E+L   L  L + M++ GY+P T  
Sbjct: 751 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 810

Query: 586 VLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFAD 645
           VL++++E+EKE ++ GHSEKLA+AFG++NTS G  IR+ KNLR+C DCH  TKFISK  D
Sbjct: 811 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 870

Query: 646 REIMVRDVNRFHHFKDGVCSCGDYW 654
           REI++RDV RFH FK+G CSCGDYW
Sbjct: 871 REIILRDVRRFHRFKNGTCSCGDYW 890

[Close]

BLAST of Tan0000260 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 484.2 bits (1245), Expect = 2.3e-135
Identity = 240/609 (39.41%), Postives = 380/609 (62.40%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFD 105
           N +I   C+ GN K+AL L +        T   L+ +       + G+ +H + +  G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279

Query: 106 QDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARM 165
            + F++ KLI++++E   + + +KVFD+   R +  WN++ +A  L       + L+  M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339

Query: 166 NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHG-YEAHVHVMTTLVDMYA 225
            +  +  D  T   L  A + S+  +  ++  + +    LR G +   + +   +V MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399

Query: 226 RFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 285
           + G V  A AVF+ +P  +V+SW+ +I+ YA+NG   EA+E++  +M    +   N  T 
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY-NIMEEEGEIAANQGTW 459

Query: 286 VSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHK 345
           VSVL AC+   AL QG  +H  +L+ GL   + V+++L  MY +CG+L+    +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519

Query: 346 RDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQL 405
            + V WN+LI+ +G HGHG KA+ +F+EM+D GV P +++FV++L ACSH+GLV+EG+  
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579

Query: 406 FESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHC 465
           FE M  ++GI PS++HY CMVD+ GRA +L+ A K ++ M  +P   +WG+LL ACR+H 
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639

Query: 466 HVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWI 525
           +V+L + AS+ LFE+EP + G +VLL+++YA A  W+ V  +R +   + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699

Query: 526 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLG 585
           EV  K+  F + ++ +P  E+++  L  L  ++K  GY+P  + VL D++++EKE I++ 
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759

Query: 586 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKD 645
           HSE+LA+AF LI T    TIRI KNLR+C DCHSVTKFISK  +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819

Query: 646 GVCSCGDYW 654
           GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823

[Close]

BLAST of Tan0000260 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 5.2e-135
Identity = 246/616 (39.94%), Postives = 384/616 (62.34%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLSHESN----PTQQTWELLILSAARRNSLSDGIDVHRHLVD 105
           N +I  L + G+  +ALL  S        PT+ ++   I + +    +  G   H+    
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 106 GGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLEL 165
            G+  D F+++ LI M+S    +++ARKVFD+  KR I  W ++ R   L G+  + + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 166 YARMNMVGVPSD--RFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTL 225
           +  + +     D   F  +  L + +++   V      + IH+ +++ G++  V V  TL
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 226 VDMYAR--FGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDS 285
           +D YA+   G V+ A  +FD++  ++ VS++++++ YA++G   EA E+FR ++ N   +
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 286 VPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQL 345
             N++T+ +VL A +   AL  GK IH  ++R GL+  + V ++++ MY +CG+++  + 
Sbjct: 285 F-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 344

Query: 346 VFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGL 405
            FDRM  ++V  W ++I+ YG+HGH  KA+E+F  MID+GV P+Y++FVSVL ACSHAGL
Sbjct: 345 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 404

Query: 406 VEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLL 465
             EG + F +M    G+ P +EHY CMVDLLGRA  L  A  +++ M+ +P   +W SLL
Sbjct: 405 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 464

Query: 466 GACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQK 525
            ACRIH +VELAE +  RLFEL+ +N G Y+LL+ IYA+A  W +V+RVR ++ +R L K
Sbjct: 465 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 524

Query: 526 VPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEE 585
            PG S +E+  +++ F   DE +PQ E+++  L  L++++ + GY+  T  V +D+DEEE
Sbjct: 525 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEE 584

Query: 586 KERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVN 645
           KE  +  HSEKLA+AFG++NT  G T+ + KNLR+C DCH+V K ISK  DRE +VRD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 646 RFHHFKDGVCSCGDYW 654
           RFHHFKDG CSCGDYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

[Close]

BLAST of Tan0000260 vs. NCBI nr
Match: XP_038895613.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa hispida])

HSP 1 Score: 1270.0 bits (3285), Expect = 0.0e+00
Identity = 624/653 (95.56%), Postives = 640/653 (98.01%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTPQSTQYPPSSRR CS+HSTSKPSVCSV+LNPSTAAN NKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTQYPPSSRRHCSAHSTSKPSVCSVSLNPSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQQTWELLILSAARRNSLSDG+DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGLDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVD ARKVFDKTRKRTIYVWNALFRALALAGHG +VLELYARMN +G+PSDRFTYTYL
Sbjct: 121 LDSVDYARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYARMNTMGLPSDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVASECLVS LQKGKEIHAHILRHGYE HVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASECLVSFLQKGKEIHAHILRHGYEGHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+L QLVFDRMHKRDVVLWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELSQLVFDRMHKRDVVLWNSLISSYGVH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMID GVSPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDRGVSPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKIVED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY PQTKVVLYDLDEEEKERIVLGHSEK+AVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHSEKIAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. NCBI nr
Match: XP_022141898.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Momordica charantia])

HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 624/653 (95.56%), Postives = 641/653 (98.16%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTPQST YPPSSRR CS+HSTS+PSVCS+ALNPS AANPNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTPYPPSSRRHCSAHSTSRPSVCSLALNPSIAANPNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQQT ELLILSAARRNSLSDG+DVHRHLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTCELLILSAARRNSLSDGLDVHRHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVD+ARKVFDKTR RTIYVWNALFRALALAGHGKEVLELYARMNM GVPSDRFTYTYL
Sbjct: 121 LDSVDDARKVFDKTRNRTIYVWNALFRALALAGHGKEVLELYARMNMTGVPSDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVASECLVSLL+KGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASECLVSLLRKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           VRNVVSWSA+IACYAKNGKPYEALELF EMMLNTHDSVPNSVTMVSVLQACAALAALEQG
Sbjct: 241 VRNVVSWSAIIACYAKNGKPYEALELFCEMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIH YILRRGLDSILPVISALVTMYARCGKL+LGQLVFDRMHKRDVVLWNSLIS YGVH
Sbjct: 301 KLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRDVVLWNSLISGYGVH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMID+G SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGIHPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKELFESMVKEHGIHPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKIVEDMR EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWD+VKRV+KLLDSR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. NCBI nr
Match: KAA0067772.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 597/653 (91.42%), Postives = 632/653 (96.78%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTP STQYPPSSRR  S+HSTSK SVCS +LNPST+AN NK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQQT ELLILSAARR SLSD +DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSAARRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHG +VLELY RM+M+GVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVAS+CLVS LQKGKEIHAHILRHGY AHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQ++FDR+HK+DV+LWNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMIDNG+SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKI+ED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY+PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. NCBI nr
Match: XP_008457445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis melo] >TYJ97374.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 596/653 (91.27%), Postives = 632/653 (96.78%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTP STQYPPSSRR  S+HSTSK SVCS +LNPST+AN NK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQQT ELLILSA+RR SLSD +DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHG +VLELY RM+M+GVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVAS+CLVS LQKGKEIHAHILRHGY AHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQ++FDR+HK+DV+LWNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMIDNG+SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKI+ED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY+PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. NCBI nr
Match: XP_022964690.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita moschata] >KAG7019172.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 598/653 (91.58%), Postives = 626/653 (95.87%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTPQ TQYPP SRR  S+HS SKPS+CSV+LN STAAN NKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQ+TWELLILSAARRNSLSDG+DVHR LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           L+SVDN RKVFDKTRKRTI+VWNALFRALALAGHGK+VLELYA+MNM+GVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKAC ASECLVS LQKGKEIHAHILRHGYEAHVH MTTLVDMYARFGCVSYA AVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD+VPNSVTMVSVLQ+CAAL+ALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQLVFD MHKRDVV+WNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEM+D+GVSPSY+SFVSVLGACSHAGLVEEGK+LFESM K+HGI P  EH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKIVED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLAD+YAEA MWDEVKRVRKLLDSR+L+KVPGRSWIEVRRKIYSFTSVDEF 
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALL+NLS EMKQRGY P TKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRI+KNLRLCEDCHS TKFISKFAD EIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. ExPASy TrEMBL
Match: A0A6J1CLW0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012148 PE=3 SV=1)

HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 624/653 (95.56%), Postives = 641/653 (98.16%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTPQST YPPSSRR CS+HSTS+PSVCS+ALNPS AANPNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTPYPPSSRRHCSAHSTSRPSVCSLALNPSIAANPNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQQT ELLILSAARRNSLSDG+DVHRHLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTCELLILSAARRNSLSDGLDVHRHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVD+ARKVFDKTR RTIYVWNALFRALALAGHGKEVLELYARMNM GVPSDRFTYTYL
Sbjct: 121 LDSVDDARKVFDKTRNRTIYVWNALFRALALAGHGKEVLELYARMNMTGVPSDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVASECLVSLL+KGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASECLVSLLRKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           VRNVVSWSA+IACYAKNGKPYEALELF EMMLNTHDSVPNSVTMVSVLQACAALAALEQG
Sbjct: 241 VRNVVSWSAIIACYAKNGKPYEALELFCEMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIH YILRRGLDSILPVISALVTMYARCGKL+LGQLVFDRMHKRDVVLWNSLIS YGVH
Sbjct: 301 KLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRDVVLWNSLISGYGVH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMID+G SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGIHPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKELFESMVKEHGIHPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKIVEDMR EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWD+VKRV+KLLDSR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. ExPASy TrEMBL
Match: A0A5A7VHC3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00960 PE=3 SV=1)

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 597/653 (91.42%), Postives = 632/653 (96.78%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTP STQYPPSSRR  S+HSTSK SVCS +LNPST+AN NK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQQT ELLILSAARR SLSD +DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSAARRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHG +VLELY RM+M+GVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVAS+CLVS LQKGKEIHAHILRHGY AHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQ++FDR+HK+DV+LWNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMIDNG+SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKI+ED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY+PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. ExPASy TrEMBL
Match: A0A5D3BEB8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001880 PE=3 SV=1)

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 596/653 (91.27%), Postives = 632/653 (96.78%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTP STQYPPSSRR  S+HSTSK SVCS +LNPST+AN NK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQQT ELLILSA+RR SLSD +DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHG +VLELY RM+M+GVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVAS+CLVS LQKGKEIHAHILRHGY AHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQ++FDR+HK+DV+LWNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMIDNG+SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKI+ED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY+PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. ExPASy TrEMBL
Match: A0A1S3C5N6 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497132 PE=3 SV=1)

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 596/653 (91.27%), Postives = 632/653 (96.78%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTP STQYPPSSRR  S+HSTSK SVCS +LNPST+AN NK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQQT ELLILSA+RR SLSD +DVH+HLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHG +VLELY RM+M+GVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKACVAS+CLVS LQKGKEIHAHILRHGY AHVHVMTTLVDMYARFGCVSYA+AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQ++FDR+HK+DV+LWNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEMIDNG+SPSY+SFVSVLGACSHAGLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKI+ED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SR+LQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLS EMKQRGY+PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. ExPASy TrEMBL
Match: A0A6J1HLJ1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464697 PE=3 SV=1)

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 598/653 (91.58%), Postives = 626/653 (95.87%), Query Frame = 0


Query: 1   MWALRTPQSTQYPPSSRRRCSSHSTSKPSVCSVALNPSTAANPNKNQLIQSLCKQGNLKQ 60
           MWALRTPQ TQYPP SRR  S+HS SKPS+CSV+LN STAAN NKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQ+TWELLILSAARRNSLSDG+DVHR LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYL 180
           L+SVDN RKVFDKTRKRTI+VWNALFRALALAGHGK+VLELYA+MNM+GVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMP 240
           LKAC ASECLVS LQKGKEIHAHILRHGYEAHVH MTTLVDMYARFGCVSYA AVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHD+VPNSVTMVSVLQ+CAAL+ALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKL+LGQLVFD MHKRDVV+WNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEH 420
           G+GRKAIEIFEEM+D+GVSPSY+SFVSVLGACSHAGLVEEGK+LFESM K+HGI P  EH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLD+AAKIVED+R EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLAD+YAEA MWDEVKRVRKLLDSR+L+KVPGRSWIEVRRKIYSFTSVDEF 
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALL+NLS EMKQRGY P TKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRI+KNLRLCEDCHS TKFISKFAD EIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of Tan0000260 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 999.6 bits (2583), Expect = 1.2e-291
Identity = 491/635 (77.32%), Postives = 555/635 (87.40%), Query Frame = 0


Query: 24  STSKPSVCSVAL-NPS----TAANPNKNQLIQSLCKQGNLKQALLLLSHESNPTQQTWEL 83
           S  KP  CSVAL NPS      A  + NQLIQSLCK+G LKQA+ +LS ES+P+QQT+EL
Sbjct: 23  SPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYEL 82

Query: 84  LILSAARRNSLSDGIDVHRHLVDGGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRT 143
           LIL    R+SLSD + VHRH++D G DQDPFLATKLI M+S+L SVD ARKVFDKTRKRT
Sbjct: 83  LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142

Query: 144 IYVWNALFRALALAGHGKEVLELYARMNMVGVPSDRFTYTYLLKACVASECLVSLLQKGK 203
           IYVWNALFRAL LAGHG+EVL LY +MN +GV SDRFTYTY+LKACVASEC V+ L KGK
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202

Query: 204 EIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNG 263
           EIHAH+ R GY +HV++MTTLVDMYARFGCV YA+ VF  MPVRNVVSWSAMIACYAKNG
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262

Query: 264 KPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPV 323
           K +EAL  FREMM  T DS PNSVTMVSVLQACA+LAALEQGKLIH YILRRGLDSILPV
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322

Query: 324 ISALVTMYARCGKLKLGQLVFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGV 383
           ISALVTMY RCGKL++GQ VFDRMH RDVV WNSLISSYGVHG+G+KAI+IFEEM+ NG 
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382

Query: 384 SPSYVSFVSVLGACSHAGLVEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAA 443
           SP+ V+FVSVLGACSH GLVEEGK+LFE+M ++HGI P +EHYACMVDLLGRANRLD+AA
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442

Query: 444 KIVEDMRTEPGPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAE 503
           K+V+DMRTEPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYVLLADIYAEA+
Sbjct: 443 KMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502

Query: 504 MWDEVKRVRKLLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMK 563
           MWDEVKRV+KLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP  EQ+HA LV L+++MK
Sbjct: 503 MWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562

Query: 564 QRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHS 623
           ++GYIPQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITKNLRLCEDCH 
Sbjct: 563 EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHL 622

Query: 624 VTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 654
            TKFISKF ++EI+VRDVNRFH FK+GVCSCGDYW
Sbjct: 623 FTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of Tan0000260 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 488.4 bits (1256), Expect = 8.9e-138
Identity = 244/610 (40.00%), Postives = 378/610 (61.97%), Query Frame = 0


Query: 49  IQSLCKQGNLKQALL---LLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFD 108
           I  LC  G L++ALL   +L  E       ++ L+ +   + +L DG  VH H++   + 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMG--FHGYDALLNACLDKRALRDGQRVHAHMIKTRYL 86

Query: 109 QDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARM 168
              +L T+L+  + + D +++ARKV D+  ++ +  W A+    +  GH  E L ++A M
Sbjct: 87  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 146

Query: 169 NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTLVDMYAR 228
                  + FT+  +L +C+ +    S L  GK+IH  I++  Y++H+ V ++L+DMYA+
Sbjct: 147 MRSDGKPNEFTFATVLTSCIRA----SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 206

Query: 229 FGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMV 288
            G +  A  +F+ +P R+VVS +A+IA YA+ G   EALE+F    L++    PN VT  
Sbjct: 207 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR--LHSEGMSPNYVTYA 266

Query: 289 SVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHKR 348
           S+L A + LA L+ GK  H ++LRR L     + ++L+ MY++CG L   + +FD M +R
Sbjct: 267 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 326

Query: 349 DVVLWNSLISSYGVHGHGRKAIEIFEEMID-NGVSPSYVSFVSVLGACSHAGLVEEGKQL 408
             + WN+++  Y  HG GR+ +E+F  M D   V P  V+ ++VL  CSH  + + G  +
Sbjct: 327 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 386

Query: 409 FESMVK-EHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIH 468
           F+ MV  E+G  P  EHY C+VD+LGRA R+D+A + ++ M ++P   V GSLLGACR+H
Sbjct: 387 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 446

Query: 469 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSW 528
             V++ E   +RL E+EP NAGNYV+L+++YA A  W +V  VR ++  + + K PGRSW
Sbjct: 447 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 506

Query: 529 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVL 588
           I+  + ++ F + D  +P+ E++ A +  +S +MKQ GY+P    VLYD+DEE+KE+++L
Sbjct: 507 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 566

Query: 589 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 648
           GHSEKLA+ FGLI T +G  IR+ KNLR+C DCH+  K  SK  +RE+ +RD NRFH   
Sbjct: 567 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 626

Query: 649 DGVCSCGDYW 654
           DG+CSCGDYW
Sbjct: 627 DGICSCGDYW 628

[Close]

BLAST of Tan0000260 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 486.9 bits (1252), Expect = 2.6e-137
Identity = 251/625 (40.16%), Postives = 390/625 (62.40%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLS----HESNPTQQTWELLILSAARRNSLSDGIDVHRH-LV 105
           N ++ SLC+   L +AL  L         P + T   ++ + +    L  G ++H + L 
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 106 DGGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLE 165
           +G  D++ F+ + L++M+     V + R+VFD    R I +WNA+    +   H KE L 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 166 LYARM-NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTL 225
           L+  M    G+ ++  T   ++ ACV S        + + IH  +++ G +    V  TL
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRS----GAFSRKEAIHGFVVKRGLDRDRFVQNTL 450

Query: 226 VDMYARFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV- 285
           +DMY+R G +  A  +F +M  R++V+W+ MI  Y  +    +AL L  +M  N    V 
Sbjct: 451 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ-NLERKVS 510

Query: 286 ---------PNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARC 345
                    PNS+T++++L +CAAL+AL +GK IHAY ++  L + + V SALV MYA+C
Sbjct: 511 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 570

Query: 346 GKLKLGQLVFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVL 405
           G L++ + VFD++ +++V+ WN +I +YG+HG+G++AI++   M+  GV P+ V+F+SV 
Sbjct: 571 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 630

Query: 406 GACSHAGLVEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDM-RTEP 465
            ACSH+G+V+EG ++F  M  ++G+ PS +HYAC+VDLLGRA R+ +A +++  M R   
Sbjct: 631 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 690

Query: 466 GPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRK 525
               W SLLGA RIH ++E+ E A++ L +LEP  A +YVLLA+IY+ A +WD+   VR+
Sbjct: 691 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 750

Query: 526 LLDSRDLQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKV 585
            +  + ++K PG SWIE   +++ F + D  +PQ E+L   L  L + M++ GY+P T  
Sbjct: 751 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 810

Query: 586 VLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFAD 645
           VL++++E+EKE ++ GHSEKLA+AFG++NTS G  IR+ KNLR+C DCH  TKFISK  D
Sbjct: 811 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 870

Query: 646 REIMVRDVNRFHHFKDGVCSCGDYW 654
           REI++RDV RFH FK+G CSCGDYW
Sbjct: 871 REIILRDVRRFHRFKNGTCSCGDYW 890

[Close]

BLAST of Tan0000260 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 484.2 bits (1245), Expect = 1.7e-136
Identity = 240/609 (39.41%), Postives = 380/609 (62.40%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLSHESNPTQQTWELLILSAARRNSLSDGIDVHRHLVDGGFD 105
           N +I   C+ GN K+AL L +        T   L+ +       + G+ +H + +  G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279

Query: 106 QDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLELYARM 165
            + F++ KLI++++E   + + +KVFD+   R +  WN++ +A  L       + L+  M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339

Query: 166 NMVGVPSDRFTYTYLLKACVASECLVSLLQKGKEIHAHILRHG-YEAHVHVMTTLVDMYA 225
            +  +  D  T   L  A + S+  +  ++  + +    LR G +   + +   +V MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399

Query: 226 RFGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 285
           + G V  A AVF+ +P  +V+SW+ +I+ YA+NG   EA+E++  +M    +   N  T 
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY-NIMEEEGEIAANQGTW 459

Query: 286 VSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQLVFDRMHK 345
           VSVL AC+   AL QG  +H  +L+ GL   + V+++L  MY +CG+L+    +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519

Query: 346 RDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGLVEEGKQL 405
            + V WN+LI+ +G HGHG KA+ +F+EM+D GV P +++FV++L ACSH+GLV+EG+  
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579

Query: 406 FESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLLGACRIHC 465
           FE M  ++GI PS++HY CMVD+ GRA +L+ A K ++ M  +P   +WG+LL ACR+H 
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639

Query: 466 HVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQKVPGRSWI 525
           +V+L + AS+ LFE+EP + G +VLL+++YA A  W+ V  +R +   + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699

Query: 526 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLG 585
           EV  K+  F + ++ +P  E+++  L  L  ++K  GY+P  + VL D++++EKE I++ 
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759

Query: 586 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKD 645
           HSE+LA+AF LI T    TIRI KNLR+C DCHSVTKFISK  +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819

Query: 646 GVCSCGDYW 654
           GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823

[Close]

BLAST of Tan0000260 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 483.0 bits (1242), Expect = 3.7e-136
Identity = 246/616 (39.94%), Postives = 384/616 (62.34%), Query Frame = 0


Query: 46  NQLIQSLCKQGNLKQALLLLSHESN----PTQQTWELLILSAARRNSLSDGIDVHRHLVD 105
           N +I  L + G+  +ALL  S        PT+ ++   I + +    +  G   H+    
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 106 GGFDQDPFLATKLINMFSELDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGKEVLEL 165
            G+  D F+++ LI M+S    +++ARKVFD+  KR I  W ++ R   L G+  + + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 166 YARMNMVGVPSD--RFTYTYLLKACVASECLVSLLQKGKEIHAHILRHGYEAHVHVMTTL 225
           +  + +     D   F  +  L + +++   V      + IH+ +++ G++  V V  TL
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 226 VDMYAR--FGCVSYANAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDS 285
           +D YA+   G V+ A  +FD++  ++ VS++++++ YA++G   EA E+FR ++ N   +
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 286 VPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLKLGQL 345
             N++T+ +VL A +   AL  GK IH  ++R GL+  + V ++++ MY +CG+++  + 
Sbjct: 285 F-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 344

Query: 346 VFDRMHKRDVVLWNSLISSYGVHGHGRKAIEIFEEMIDNGVSPSYVSFVSVLGACSHAGL 405
            FDRM  ++V  W ++I+ YG+HGH  KA+E+F  MID+GV P+Y++FVSVL ACSHAGL
Sbjct: 345 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 404

Query: 406 VEEGKQLFESMVKEHGIHPSVEHYACMVDLLGRANRLDDAAKIVEDMRTEPGPKVWGSLL 465
             EG + F +M    G+ P +EHY CMVDLLGRA  L  A  +++ M+ +P   +W SLL
Sbjct: 405 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 464

Query: 466 GACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRDLQK 525
            ACRIH +VELAE +  RLFEL+ +N G Y+LL+ IYA+A  W +V+RVR ++ +R L K
Sbjct: 465 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 524

Query: 526 VPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEE 585
            PG S +E+  +++ F   DE +PQ E+++  L  L++++ + GY+  T  V +D+DEEE
Sbjct: 525 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEE 584

Query: 586 KERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVN 645
           KE  +  HSEKLA+AFG++NT  G T+ + KNLR+C DCH+V K ISK  DRE +VRD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 646 RFHHFKDGVCSCGDYW 654
           RFHHFKDG CSCGDYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

The following BLAST results are available for this feature:

BLAST of Tan0000260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	1.7e-290	77.32	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9LIC3	1.2e-136	40.00	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
Q7Y211	3.6e-136	40.16	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
O81767	2.3e-135	39.41	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX...	[more]
Q9LW32	5.2e-135	39.94	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]

BLAST of Tan0000260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895613.1	0.0e+00	95.56	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa ...	[more]
XP_022141898.1	0.0e+00	95.56	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Momordica ...	[more]
KAA0067772.1	0.0e+00	91.42	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008457445.1	0.0e+00	91.27	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic ...	[more]
XP_022964690.1	0.0e+00	91.58	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita ...	[more]

BLAST of Tan0000260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLW0	0.0e+00	95.56	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordic...	[more]
A0A5A7VHC3	0.0e+00	91.42	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BEB8	0.0e+00	91.27	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5N6	0.0e+00	91.27	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis ...	[more]
A0A6J1HLJ1	0.0e+00	91.58	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbit...	[more]

BLAST of Tan0000260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	1.2e-291	77.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13770.1	8.9e-138	40.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	2.6e-137	40.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G33990.1	1.7e-136	39.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	3.7e-136	39.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 345..392 e-value: 6.9E-10 score: 39.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 46..65 e-value: 1.3 score: 9.4 coord: 216..243 e-value: 0.019 score: 15.2 coord: 421..446 e-value: 0.51 score: 10.7 coord: 245..271 e-value: 1.1E-8 score: 34.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 138..185 e-value: 0.0019 score: 18.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 245..271 e-value: 4.1E-7 score: 27.8 coord: 348..381 e-value: 3.7E-8 score: 31.0 coord: 383..417 e-value: 5.7E-5 score: 21.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 243..277 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..172 score: 8.801982
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..416 score: 8.999285
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 346..380 score: 12.75901
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 519..643 e-value: 4.4E-40 score: 136.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 43..193 e-value: 2.1E-22 score: 81.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 302..399 e-value: 9.1E-21 score: 76.0 coord: 194..301 e-value: 2.5E-22 score: 81.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 400..590 e-value: 1.4E-13 score: 52.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 308..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR24015:SF96	OS01G0848300 PROTEIN	coord: 42..642
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 42..642

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000260.1	Tan0000260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding