Tan0000164 (gene) Snake gourd v1

Overview
NameTan0000164
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAllyl alcohol dehydrogenase-like protein
LocationLG07: 71060230 .. 71061172 (+)
RNA-Seq ExpressionTan0000164
SyntenyTan0000164
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGTAAAAAAAGTAGATAAGAAATGAAGTTTAAAAATTCTTGAACGAAAATGAACCTGCTACTTTCTATGCTAGTACATATATAAATCAAGTTAAGTTCAGAAGACGGTCCGAATCATTTCTAGAAGACATCAGAAGGATCGCAACGTTACGACACGACGTTACCTCCAAAGCCTTTATCCTCTTGAAACAATTTTCAGTTCCAAAACCCTAAACCAATCTTCACTCTTATCTCCGGCGAAATCTTTCGATGGGTCTTCTCTCGTGGTGGAAAGGCGAATCTGCACCATCGGAGTCCAATTCGAAGCCACAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCCGAAGTCCCTGGCCTGAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACAGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCTGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGATGCGCCTCTTTTTCGCGTCGTCTTCTGAGGATGCTTTGAGATGTAAGCGAAATTGAAATTCATAAACGCTTATTCTATAGAGCGAGCTTTGCGAATTACGACATCTTTGAGGAGAATTGATTTTTCTTCCTCTTCTTCTTTTTTTTGCATATAATTGATTGTCGTGATTTATCTTCGGAAATTGTTGAATCTTCTTGCTTCTCACGATCCATTACTGGGTTTTTTGATAAACGAAAGACAAAACTGCATTTGCATTTTTCATCTTTTAAATCTTAAATTCGGGACAATGGAGTCTATATCTTCAATGCTTAATTGGTTCTGTTTGATGCTTTGATTGCTTTGGCCAAGTTCTCGACTGTACTTGAAATTACAGGTTCATGGCCAGCCTCCATTTTATGCCTCCATGGATAGTTGTTGGGTG

mRNA sequence

AAAAAAGTAAAAAAAGTAGATAAGAAATGAAGTTTAAAAATTCTTGAACGAAAATGAACCTGCTACTTTCTATGCTAGTACATATATAAATCAAGTTAAGTTCAGAAGACGGTCCGAATCATTTCTAGAAGACATCAGAAGGATCGCAACGTTACGACACGACGTTACCTCCAAAGCCTTTATCCTCTTGAAACAATTTTCAGTTCCAAAACCCTAAACCAATCTTCACTCTTATCTCCGGCGAAATCTTTCGATGGGTCTTCTCTCGTGGTGGAAAGGCGAATCTGCACCATCGGAGTCCAATTCGAAGCCACAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCCGAAGTCCCTGGCCTGAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACAGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCTGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGATGCGCCTCTTTTTCGCGTCGTCTTCTGAGGATGCTTTGAGATGTAAGCGAAATTGAAATTCATAAACGCTTATTCTATAGAGCGAGCTTTGCGAATTACGACATCTTTGAGGAGAATTGATTTTTCTTCCTCTTCTTCTTTTTTTTGCATATAATTGATTGTCGTGATTTATCTTCGGAAATTGTTGAATCTTCTTGCTTCTCACGATCCATTACTGGGTTTTTTGATAAACGAAAGACAAAACTGCATTTGCATTTTTCATCTTTTAAATCTTAAATTCGGGACAATGGAGTCTATATCTTCAATGCTTAATTGGTTCTGTTTGATGCTTTGATTGCTTTGGCCAAGTTCTCGACTGTACTTGAAATTACAGGTTCATGGCCAGCCTCCATTTTATGCCTCCATGGATAGTTGTTGGGTG

Coding sequence (CDS)

ATGGGTCTTCTCTCGTGGTGGAAAGGCGAATCTGCACCATCGGAGTCCAATTCGAAGCCACAGCCTCCTCCGAAGAACGTCTCTCAGCCGGCCGAAGTCCCTGGCCTGAACGGCGCCGTCGAAGTCCCCCGACCGGCCGCCACTGTGACAGTCTTCGAGTTCGGCTCCGTCTCCTCTTCCTCCGATAAGGTCACGCTCGCCGGTTACTGCCCTGTCTCCGACGACCTCGAGCCCTGCCGCTGGGAGATTCTGCCGGCGAGCGGCTCCGATGCGCCTCTTTTTCGCGTCGTCTTCTGA

Protein sequence

MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSSSDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Homology
[Close]
BLAST of Tan0000164 vs. NCBI nr
Match: XP_022952897.1 (uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothetical protein SDJN02_26421, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. NCBI nr
Match: XP_023554244.1 (uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 9.5e-46
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSESNSKPQPPPKNVSQP EVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPPEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. NCBI nr
Match: XP_038886991.1 (uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 uncharacterized protein LOC120077159 [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG+S PS+SNSKP PP KNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGQSPPSDSNSKPPPPQKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. NCBI nr
Match: XP_022972011.1 (uncharacterized protein LOC111470658 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSESNSK QPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. NCBI nr
Match: XP_022157409.1 (uncharacterized protein LOC111024112 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-43
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKGE+APSESNSKPQPP  NVSQPAEVPGLNGAVEVPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPA+GSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match: A0A6J1GLN4 (uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC111455443 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match: A0A6J1I4S4 (uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 93/98 (94.90%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKG SAPSESNSK QPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVS+S
Sbjct: 1  MGLLSWWKGGSAPSESNSKSQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSAS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SD VTL GYCPVSDDLEPCRWEILPASGSDAPLFRVVF
Sbjct: 61 SDSVTLTGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 98

[Close]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match: A0A6J1DWE4 (uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024112 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MGLLSWWKGE+APSESNSKPQPP  NVSQPAEVPGLNGAVEVPRP  +VTVFEFGSVSSS
Sbjct: 1  MGLLSWWKGEAAPSESNSKPQPPLXNVSQPAEVPGLNGAVEVPRP-GSVTVFEFGSVSSS 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SDKVTLAGYCPVSDDLEPCRWEILPA+GSDAPLFRVVF
Sbjct: 61 SDKVTLAGYCPVSDDLEPCRWEILPATGSDAPLFRVVF 97

[Close]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match: A0A5D3E692 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004090 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.9e-42
Identity = 85/99 (85.86%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSK-PQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG+S PS+S SK PQPP KN+SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SSDKVTLAGYCPVSDD EPCRWEI+PASGSDAPLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match: A0A1S3CQC7 (uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.9e-42
Identity = 85/99 (85.86%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSK-PQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSS 60
          MGLLSWWKG+S PS+S SK PQPP KN+SQPAEVPGLNGA+EVPRPAA+VTVFEFGSV++
Sbjct: 1  MGLLSWWKGQSPPSDSTSKPPQPPSKNLSQPAEVPGLNGALEVPRPAASVTVFEFGSVTA 60

Query: 61 SSDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
          SSDKVTLAGYCPVSDD EPCRWEI+PASGSDAPLFR+VF
Sbjct: 61 SSDKVTLAGYCPVSDDFEPCRWEIMPASGSDAPLFRIVF 99

[Close]
BLAST of Tan0000164 vs. TAIR 10
Match: AT3G59840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 72 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 8.6e-29
Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0 

Query: 1  MGLLSWWKGESAPSESNSKPQPPPKNVSQPAEVPGLNGAVEVPRPAATVTVFEFGSVSSS 60
          MG+LSW+ G   PS+S +      +        PG+NGA+EVPRP    TVFEFGSV+++
Sbjct: 1  MGILSWFTGSPKPSQSETSKPEMIQMPKSETPAPGMNGAIEVPRP-DRATVFEFGSVAAT 60

Query: 61 SDKVTLAGYCPVSDDLEPCRWEILPASGSDAPLFRVVF 99
           D+VTLAGYCPVSDDLEPCRWEILPA G DAP FRVVF
Sbjct: 61 GDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97

The following BLAST results are available for this feature:
BLAST of Tan0000164 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0000164 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022952897.12.5e-4695.92uncharacterized protein LOC111455443 [Cucurbita moschata] >KAG7011515.1 hypothet... [more]
XP_023554244.19.5e-4694.90uncharacterized protein LOC111811567 [Cucurbita pepo subsp. pepo][more]
XP_038886991.11.2e-4594.90uncharacterized protein LOC120077159 [Benincasa hispida] >XP_038886992.1 unchara... [more]
XP_022972011.12.1e-4594.90uncharacterized protein LOC111470658 [Cucurbita maxima][more]
XP_022157409.13.4e-4392.86uncharacterized protein LOC111024112 [Momordica charantia][more]
BLAST of Tan0000164 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GLN41.2e-4695.92uncharacterized protein LOC111455443 OS=Cucurbita moschata OX=3662 GN=LOC1114554... [more]
A0A6J1I4S41.0e-4594.90uncharacterized protein LOC111470658 OS=Cucurbita maxima OX=3661 GN=LOC111470658... [more]
A0A6J1DWE41.6e-4392.86uncharacterized protein LOC111024112 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5D3E6926.9e-4285.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CQC76.9e-4285.86uncharacterized protein LOC103503504 OS=Cucumis melo OX=3656 GN=LOC103503504 PE=... [more]
BLAST of Tan0000164 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59840.18.6e-2961.22unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000164.1Tan0000164.1mRNA