Tan0000146 (gene) Snake gourd v1

Overview


Name	Tan0000146
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein RALF-like 33
Location	LG04: 79175991 .. 79176505 (-)
RNA-Seq Expression	Tan0000146
Synteny	Tan0000146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAGTTTAAAGTAATGAAGAAGCCAACCATGGGAAACTTTTCTTTTCCTCCTGCCTTATGTTTGCTCTTTTTCACCATAGCCTTCTTCATCTCTTCGTCCTCTTTAACGGTCACGGCAACGAGTAGCGACCGTAGTACTCTTAGCTGGCTCTTGGCAGAAGCTCGATGCAATGGGCGTTCGATAAGCGAATGCATGATGGACGTTGAGTTTGACATGGATTCTGAGATCAATCGTCGCATCTTAGCTACTTCGAGTTACATAAGTTACAAGTCATTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCAACGCCATTACTCGTTGCAGAAGCTAAGCAAAACTCATTTTCATGTTCTTGTCTTTGTAACATAGAATAAATTTGAGAAAGGAAGTTGCCATGTTTGTGTTTATTATGGAGTGTGTGTTTAATTGGTCTTGCACTTTCATTGTGACC

mRNA sequence

TCAAGTTTAAAGTAATGAAGAAGCCAACCATGGGAAACTTTTCTTTTCCTCCTGCCTTATGTTTGCTCTTTTTCACCATAGCCTTCTTCATCTCTTCGTCCTCTTTAACGGTCACGGCAACGAGTAGCGACCGTAGTACTCTTAGCTGGCTCTTGGCAGAAGCTCGATGCAATGGGCGTTCGATAAGCGAATGCATGATGGACGTTGAGTTTGACATGGATTCTGAGATCAATCGTCGCATCTTAGCTACTTCGAGTTACATAAGTTACAAGTCATTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCAACGCCATTACTCGTTGCAGAAGCTAAGCAAAACTCATTTTCATGTTCTTGTCTTTGTAACATAGAATAAATTTGAGAAAGGAAGTTGCCATGTTTGTGTTTATTATGGAGTGTGTGTTTAATTGGTCTTGCACTTTCATTGTGACC

Coding sequence (CDS)

ATGAAGAAGCCAACCATGGGAAACTTTTCTTTTCCTCCTGCCTTATGTTTGCTCTTTTTCACCATAGCCTTCTTCATCTCTTCGTCCTCTTTAACGGTCACGGCAACGAGTAGCGACCGTAGTACTCTTAGCTGGCTCTTGGCAGAAGCTCGATGCAATGGGCGTTCGATAAGCGAATGCATGATGGACGTTGAGTTTGACATGGATTCTGAGATCAATCGTCGCATCTTAGCTACTTCGAGTTACATAAGTTACAAGTCATTGAAGGCGAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCCGAAGCTAACCCGTATCAGCGGGGTTGCAACGCCATTACTCGTTGCAGAAGCTAA

Protein sequence

MKKPTMGNFSFPPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCRS

Homology

[Close]

BLAST of Tan0000146 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-24
Identity = 63/119 (52.94%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 12  PPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLL---AEARCNGRSISECMM-DVEFD 71
           P  L L     AFFIS       A + D     W++   +   C G SI EC+  + EF+
Sbjct: 4   PSGLILCVLIGAFFIS------MAAAGDSGAYDWVMPARSGGGCKG-SIGECIAEEEEFE 63

Query: 72  MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCRS 127
           +DSE NRRILAT  YISY +L+ N++PCSRRG+SYYNC+PGA+ANPY RGC+AITRCRS
Sbjct: 64  LDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Tan0000146 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-24
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 12  PPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMM---DVEFDM 71
           P A+ +   T+ F  ++    VT+ SS      ++  E++CNG +I+EC +   + EF+M
Sbjct: 8   PVAIIIAILTVHFLFAA----VTSQSSG----DFVPIESKCNG-TIAECSLSTAEEEFEM 67

Query: 72  DSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCR 126
           DSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNC+ GA+ANPY RGC+AITRCR
Sbjct: 68  DSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Tan0000146 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 15  LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLA---EARCNGRSISECMMDVEFDMDSE 74
           L L    +  FI SS       ++D   ++W       + C+G SI+EC+   E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSE 66

Query: 75  INRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCRS 127
           INRRILAT+ YISY+SLK N++PCSRRG+SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Tan0000146 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 62  MDVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAI 121
           M  EF+MDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

Query: 122 TRCR 126
           TRCR
Sbjct: 133 TRCR 136

[Close]

BLAST of Tan0000146 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-20
Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 52  CNGRSISECMM-DVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 111
           C G SI+EC+  + E + DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 112 ANPYQRGCNAITRCR 126
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Tan0000146 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.9e-46
Identity = 100/121 (82.64%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 6   MGNFSFPPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDVE 65
           MGN S PPA  +L FTIA F+SSSSL VTA SSD+S L+WL  E RC+GRSISECMM +E
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQS-LNWLSTEVRCHGRSISECMMKIE 60

Query: 66  FDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCR 125
           F+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC AITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120

Query: 126 S 127
           S
Sbjct: 121 S 120

[Close]

BLAST of Tan0000146 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 6   MGNFSFPPA-LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDV 65
           MGN S PPA   +L FTIAFF+SSSSL V A S DRS LSWL  EARC+GRS+SECMMDV
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRS-LSWLSTEARCHGRSLSECMMDV 60

Query: 66  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC  ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 126 RS 127
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Tan0000146 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_014956 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 9.3e-46
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 6   MGNFSFPPALCLLFFTIAFFI--SSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMD 65
           MG+ S PPAL +L FTIAFF+  SSSSL VT  SSDRS L+WL  EARC+GRSISECMM 
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRS-LNWLSTEARCHGRSISECMMH 60

Query: 66  VEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITR 125
           +EF+MDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNCQPGAEANPYQRGC AITR
Sbjct: 61  IEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITR 120

Query: 126 CRS 127
           CRS
Sbjct: 121 CRS 122

[Close]

BLAST of Tan0000146 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.9e-45
Identity = 100/122 (81.97%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 6   MGNFSFPPA-LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDV 65
           MGN S PPA   +L FTIAFF+SSSSL V A S DRS LSWL  EARC+GR +SECMM+V
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRS-LSWLSTEARCHGRLLSECMMNV 60

Query: 66  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC  ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 126 RS 127
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Tan0000146 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.7 bits (478), Expect = 3.0e-44
Identity = 99/122 (81.15%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 6   MGNFSFPPA-LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDV 65
           MGN S PPA   +L FTIAFF+ SSSL V A S D S LSWL  EARC+GRS+SECMM+V
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVYSSSLMVMAMSGDHS-LSWLSTEARCHGRSLSECMMNV 60

Query: 66  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC  ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 126 RS 127
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Tan0000146 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 9.1e-47
Identity = 100/121 (82.64%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 6   MGNFSFPPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDVE 65
           MGN S PPA  +L FTIA F+SSSSL VTA SSD+S L+WL  E RC+GRSISECMM +E
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQS-LNWLSTEVRCHGRSISECMMKIE 60

Query: 66  FDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCR 125
           F+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC AITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCR 120

Query: 126 S 127
           S
Sbjct: 121 S 120

[Close]

BLAST of Tan0000146 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 6   MGNFSFPPA-LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDV 65
           MGN S PPA   +L FTIAFF+SSSSL V A S DRS LSWL  EARC+GRS+SECMMDV
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRS-LSWLSTEARCHGRSLSECMMDV 60

Query: 66  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC  ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 126 RS 127
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Tan0000146 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.5e-46
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 0


Query: 6   MGNFSFPPALCLLFFTIAFFI--SSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMD 65
           MG+ S PPAL +L FTIAFF+  SSSSL VT  SSDRS L+WL  EARC+GRSISECMM 
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRS-LNWLSTEARCHGRSISECMMH 60

Query: 66  VEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITR 125
           +EF+MDSEINRRILATSSYISYKSL+ANNIPCSRRGSSYYNCQPGAEANPYQRGC AITR
Sbjct: 61  IEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITR 120

Query: 126 CRS 127
           CRS
Sbjct: 121 CRS 122

[Close]

BLAST of Tan0000146 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 100/122 (81.97%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 6   MGNFSFPPA-LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMMDV 65
           MGN S PPA   +L FTIAFF+SSSSL V A S DRS LSWL  EARC+GR +SECMM+V
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRS-LSWLSTEARCHGRLLSECMMNV 60

Query: 66  EFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
           EF+MDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGC  ITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120

Query: 126 RS 127
           RS
Sbjct: 121 RS 121

[Close]

BLAST of Tan0000146 vs. ExPASy TrEMBL
Match: A0A5B6YRQ5 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_003848 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 72/108 (66.67%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 20  FTIAFFISSSSLTVTATSS-DRSTLSWLLAEARCNGRSISECMMDVEFDMDSEINRRILA 79
           F  A  I+SSS TV AT        SW+ A+  C G SI+ECM   EFDMDSEINRRILA
Sbjct: 19  FITALIIASSSSTVDATGDHHHHQFSWMPAKPACQG-SIAECMAAGEFDMDSEINRRILA 78

Query: 80  TSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCRS 127
           TSSYISY +L+ N +PCSRRG+SYYNCQPGAEANPY RGC+ ITRCRS
Sbjct: 79  TSSYISYGALQRNTVPCSRRGASYYNCQPGAEANPYSRGCSTITRCRS 125

[Close]

BLAST of Tan0000146 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 12  PPALCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLAEARCNGRSISECMM---DVEFDM 71
           P A+ +   T+ F  ++    VT+ SS      ++  E++CNG +I+EC +   + EF+M
Sbjct: 8   PVAIIIAILTVHFLFAA----VTSQSSG----DFVPIESKCNG-TIAECSLSTAEEEFEM 67

Query: 72  DSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCR 126
           DSEINRRILAT+ YISY +L+ N +PCSRRG+SYYNC+ GA+ANPY RGC+AITRCR
Sbjct: 68  DSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Tan0000146 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 15  LCLLFFTIAFFISSSSLTVTATSSDRSTLSWLLA---EARCNGRSISECMMDVEFDMDSE 74
           L L    +  FI SS       ++D   ++W       + C+G SI+EC+   E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSE 66

Query: 75  INRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRCRS 127
           INRRILAT+ YISY+SLK N++PCSRRG+SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Tan0000146 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 104.0 bits (258), Expect = 9.1e-23
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 62  MDVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCNAI 121
           M  EF+MDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

Query: 122 TRCR 126
           TRCR
Sbjct: 133 TRCR 136

[Close]

BLAST of Tan0000146 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 52  CNGRSISECMM-DVEFDMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 111
           C G SI+EC+  + E + DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 112 ANPYQRGCNAITRCR 126
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Tan0000146 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 84.0 bits (206), Expect = 9.7e-17
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 31  LTVTATSSDRSTLSWLLAEARCNGRSISECMMDVEFDMDSEINRRILAT-SSYISYKSLK 90
           L   A  ++ +  +W L ++  NG+       ++++ MDSE NRR LA   SYISY +L+
Sbjct: 11  LLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALR 70

Query: 91  ANNIPCSRRGSSYYNCQPGAEANPYQRGCNAITRC 125
            NN+PCSRRG SYY+C+    ANPY+RGC+ IT C
Sbjct: 71  KNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of Tan0000146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945T0	2.1e-24	52.94	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	2.1e-24	52.14	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	1.8e-23	53.04	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9LUS7	1.3e-21	75.00	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	5.4e-20	61.33	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Tan0000146 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044366.1	1.9e-46	82.64	protein RALF-like 33 [Cucumis melo var. makuwa]	[more]
XP_022934551.1	3.2e-46	83.61	protein RALF-like 1 [Cucurbita moschata]	[more]
KGN52797.1	9.3e-46	82.11	hypothetical protein Csa_014956 [Cucumis sativus]	[more]
XP_022983404.1	7.9e-45	81.97	protein RALF-like 1 [Cucurbita maxima]	[more]
XP_023529110.1	3.0e-44	81.15	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0000146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQI0	9.1e-47	82.64	Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G...	[more]
A0A6J1F244	1.6e-46	83.61	protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1	[more]
A0A0A0KWI2	4.5e-46	82.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1	[more]
A0A6J1J798	3.8e-45	81.97	protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1	[more]
A0A5B6YRQ5	1.1e-28	66.67	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_003848 PE=3 SV=1	[more]

BLAST of Tan0000146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	1.5e-25	52.14	ralf-like 33	[more]
AT1G02900.1	1.3e-24	53.04	rapid alkalinization factor 1	[more]
AT3G16570.1	9.1e-23	75.00	rapid alkalinization factor 23	[more]
AT3G05490.1	3.8e-21	61.33	ralf-like 22	[more]
AT2G33775.1	9.7e-17	45.26	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 65..125 e-value: 3.1E-27 score: 95.3
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 16..126
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 16..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000146.1	Tan0000146.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane