Tan0000109 (gene) Snake gourd v1

Overview


Name	Tan0000109
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ribosome biogenesis NEP1-like protein
Location	LG06: 18911206 .. 18911996 (-)
RNA-Seq Expression	Tan0000109
Synteny	Tan0000109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCAGACCCTCTCTCACAGTGAGTTCTATCCGTCAACCCTTTTGTTTTTTGTTCTGTTTTTTAATTTGTAGGAATGAATTGATTTGTGTCTGTCTGTCTGATGGGCATTGCATTGCAGAATAATGTGTGGAAATCAATGCTTAGGACTATGGAAGGGAAGCGTCGTTTAGCTTCGTCTACCACCAGCGCTTCGGGCGTTGAAAATAATGCTGCGAATTCGTCTTCTTCTAAGTTAATAAACAAACAAAAACCCAACCCAACTCAACCCAACCCATTATTATTTATTAATGAATGAATTGTTGATTATATTTATGGGACACCACAGGTCGGGCGGTTCGAGTGGGGAAAGCGAGTACATGAAGAGTGAGTACGCACCAATCTACATTGTGATGGGGTTTGTGGGGGTTGCTTTGACGATCGCAACCCACACGGCGAAGCAGCAGTTGATGCATTCGCCGGTGGTCAACTTCAGCAAGAAGAAGAGAGAGAGCGTTCCGGAGGTGGAGGATCCCGACACCGTCATTAATTCCGCCGATAAATTTATCAACAAATCCTTTCTTAGGAAGGTCGCTCACATCCAGGACGACACCAACACCCTCACTGATCCCGTCCACCCTGACCCTTTTACCAGGTTTCTCTCTCCATATCCCAAATCAATTTTTTTTCTATAACCTAATTATTATAAATCCATGCTTTATAATTTTAATATAAAAATGCTCTTTGCTTTCAGGCCTCGTAATGCCGAGACTCTCAAAACGGCTGGGGTGAATCCTGCCCGACATTGA

mRNA sequence

ATGGCTTTCAGACCCTCTCTCACAAATAATGTGTGGAAATCAATGCTTAGGACTATGGAAGGGAAGCGTCGTTTAGCTTCGTCTACCACCAGCGCTTCGGGCGTTGAAAATAATGCTGCGAATTCGTCTTCTTCTAAGTCGGGCGGTTCGAGTGGGGAAAGCGAGTACATGAAGAGTGAGTACGCACCAATCTACATTGTGATGGGGTTTGTGGGGGTTGCTTTGACGATCGCAACCCACACGGCGAAGCAGCAGTTGATGCATTCGCCGGTGGTCAACTTCAGCAAGAAGAAGAGAGAGAGCGTTCCGGAGGTGGAGGATCCCGACACCGTCATTAATTCCGCCGATAAATTTATCAACAAATCCTTTCTTAGGAAGGTCGCTCACATCCAGGACGACACCAACACCCTCACTGATCCCGTCCACCCTGACCCTTTTACCAGGCCTCGTAATGCCGAGACTCTCAAAACGGCTGGGGTGAATCCTGCCCGACATTGA

Coding sequence (CDS)

ATGGCTTTCAGACCCTCTCTCACAAATAATGTGTGGAAATCAATGCTTAGGACTATGGAAGGGAAGCGTCGTTTAGCTTCGTCTACCACCAGCGCTTCGGGCGTTGAAAATAATGCTGCGAATTCGTCTTCTTCTAAGTCGGGCGGTTCGAGTGGGGAAAGCGAGTACATGAAGAGTGAGTACGCACCAATCTACATTGTGATGGGGTTTGTGGGGGTTGCTTTGACGATCGCAACCCACACGGCGAAGCAGCAGTTGATGCATTCGCCGGTGGTCAACTTCAGCAAGAAGAAGAGAGAGAGCGTTCCGGAGGTGGAGGATCCCGACACCGTCATTAATTCCGCCGATAAATTTATCAACAAATCCTTTCTTAGGAAGGTCGCTCACATCCAGGACGACACCAACACCCTCACTGATCCCGTCCACCCTGACCCTTTTACCAGGCCTCGTAATGCCGAGACTCTCAAAACGGCTGGGGTGAATCCTGCCCGACATTGA

Protein sequence

MAFRPSLTNNVWKSMLRTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSEYAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPARH

Homology

[Close]

BLAST of Tan0000109 vs. NCBI nr
Match: XP_008459927.1 (PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-55
Identity = 124/164 (75.61%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 3   FRPSLTNNVWKSML--RTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSE 62
           FR SL N +WKSML    ++G RR ASSTT+ S    NA++SSSS S G SG SEYMK E
Sbjct: 4   FRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSA---NASSSSSSSSKGGSGGSEYMKGE 63

Query: 63  YAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFIN 122
           YAPIYIVMG V V ++IATHTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFIN
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPAR 165
           KSFLRKVAHIQDDT TL DPVH DPFTRPRNAETLKTAGV+P R
Sbjct: 124 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTR 164

[Close]

BLAST of Tan0000109 vs. NCBI nr
Match: XP_004140656.2 (uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical protein Csa_005593 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55
Identity = 120/164 (73.17%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 3   FRPSLTNNVWKSML--RTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSE 62
           FR SL N +WKSML    ++G RR +SSTT+ S      A+S SS S G SG SEYMK E
Sbjct: 4   FRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGE 63

Query: 63  YAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFIN 122
           YAPIYIVMG V V ++IATHTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFIN
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPAR 165
           KSFLRKVAHIQ DT TL+DPVHPDPFTRPRNAETLKTAG++P R
Sbjct: 124 KSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTR 167

[Close]

BLAST of Tan0000109 vs. NCBI nr
Match: XP_038906484.1 (uncharacterized protein LOC120092464 [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.9e-55
Identity = 121/167 (72.46%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 3   FRPSLTNNVWKSML--RTMEGKRRLASSTT--SASGVEN-NAANSSSSKSGGSSGESEYM 62
           F  SLTN VWK+ML    ++GKRRLASSTT  +A+ ++  ++++SSSS S G S  SEYM
Sbjct: 4   FTTSLTNKVWKAMLVGSRIQGKRRLASSTTAPAANNIQKASSSSSSSSSSKGGSSSSEYM 63

Query: 63  KSEYAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADK 122
           K EYAPIYIV+G V VA++I THTAKQQL+HSPVVNFSKKKRES+PEV+DPDT+INSA+K
Sbjct: 64  KGEYAPIYIVVGMVAVAVSIGTHTAKQQLLHSPVVNFSKKKRESIPEVDDPDTIINSANK 123

Query: 123 FINKSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPAR 165
           FINKSFLRKVAHIQ+DT TL DPVHP+PFTRPRNAETLKTAGV+P R
Sbjct: 124 FINKSFLRKVAHIQEDTKTLPDPVHPNPFTRPRNAETLKTAGVDPTR 170

[Close]

BLAST of Tan0000109 vs. NCBI nr
Match: KAA0039866.1 (putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24635.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52
Identity = 115/146 (78.77%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 19  MEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSEYAPIYIVMGFVGVALTIA 78
           ++G RR ASSTT+ S   N +++SSSS S G SGESEYMK EYAPIYIVMG V V ++IA
Sbjct: 7   IQGNRRFASSTTAPSA--NASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIA 66

Query: 79  THTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQDDTNTLT 138
           THTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFINKSFLRKVAHIQDDT TL 
Sbjct: 67  THTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLP 126

Query: 139 DPVHPDPFTRPRNAETLKTAGVNPAR 165
           DPVHPDPFTRPRNAETLKTAGV+P R
Sbjct: 127 DPVHPDPFTRPRNAETLKTAGVDPTR 150

[Close]

BLAST of Tan0000109 vs. NCBI nr
Match: ADN33694.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 114/146 (78.08%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 19  MEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSEYAPIYIVMGFVGVALTIA 78
           ++G RR ASSTT+ S    NA++SSSS S G SG SEYMK EYAPIYIVMG V V ++IA
Sbjct: 7   IQGNRRFASSTTAPSA---NASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVVSIA 66

Query: 79  THTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQDDTNTLT 138
           THTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFINKSFLRKVAHIQDDT TL 
Sbjct: 67  THTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLP 126

Query: 139 DPVHPDPFTRPRNAETLKTAGVNPAR 165
           DPVH DPFTRPRNAETLKTAGV+P R
Sbjct: 127 DPVHLDPFTRPRNAETLKTAGVDPTR 149

[Close]

BLAST of Tan0000109 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.3e-56
Identity = 124/164 (75.61%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 3   FRPSLTNNVWKSML--RTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSE 62
           FR SL N +WKSML    ++G RR ASSTT+ S    NA++SSSS S G SG SEYMK E
Sbjct: 4   FRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSA---NASSSSSSSSKGGSGGSEYMKGE 63

Query: 63  YAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFIN 122
           YAPIYIVMG V V ++IATHTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFIN
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPAR 165
           KSFLRKVAHIQDDT TL DPVH DPFTRPRNAETLKTAGV+P R
Sbjct: 124 KSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTR 164

[Close]

BLAST of Tan0000109 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 120/164 (73.17%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 3   FRPSLTNNVWKSML--RTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSE 62
           FR SL N +WKSML    ++G RR +SSTT+ S      A+S SS S G SG SEYMK E
Sbjct: 4   FRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGE 63

Query: 63  YAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFIN 122
           YAPIYIVMG V V ++IATHTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFIN
Sbjct: 64  YAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFIN 123

Query: 123 KSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNPAR 165
           KSFLRKVAHIQ DT TL+DPVHPDPFTRPRNAETLKTAG++P R
Sbjct: 124 KSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTR 167

[Close]

BLAST of Tan0000109 vs. ExPASy TrEMBL
Match: A0A5D3DLZ1 (Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001820 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.0e-53
Identity = 115/146 (78.77%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 19  MEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSEYAPIYIVMGFVGVALTIA 78
           ++G RR ASSTT+ S   N +++SSSS S G SGESEYMK EYAPIYIVMG V V ++IA
Sbjct: 7   IQGNRRFASSTTAPSA--NASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIA 66

Query: 79  THTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQDDTNTLT 138
           THTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFINKSFLRKVAHIQDDT TL 
Sbjct: 67  THTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLP 126

Query: 139 DPVHPDPFTRPRNAETLKTAGVNPAR 165
           DPVHPDPFTRPRNAETLKTAGV+P R
Sbjct: 127 DPVHPDPFTRPRNAETLKTAGVDPTR 150

[Close]

BLAST of Tan0000109 vs. ExPASy TrEMBL
Match: E5GB52 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 114/146 (78.08%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 19  MEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEYMKSEYAPIYIVMGFVGVALTIA 78
           ++G RR ASSTT+ S    NA++SSSS S G SG SEYMK EYAPIYIVMG V V ++IA
Sbjct: 7   IQGNRRFASSTTAPSA---NASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVAVVVSIA 66

Query: 79  THTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQDDTNTLT 138
           THTAKQQL+HSP+VN SKKKRES+PEVEDPDTVI SADKFINKSFLRKVAHIQDDT TL 
Sbjct: 67  THTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLP 126

Query: 139 DPVHPDPFTRPRNAETLKTAGVNPAR 165
           DPVH DPFTRPRNAETLKTAGV+P R
Sbjct: 127 DPVHLDPFTRPRNAETLKTAGVDPTR 149

[Close]

BLAST of Tan0000109 vs. ExPASy TrEMBL
Match: A0A6J1D5L1 (uncharacterized protein LOC111017496 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.3e-48
Identity = 116/166 (69.88%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 1   MAFRPSLTNNVWKSML----RTMEGKRRLASSTTSASGVENNAANSSSSKSGGSSGESEY 60
           MAFR +L    WKSML      +EGKR  ASSTT        A++SSSSK       SEY
Sbjct: 1   MAFRRTL----WKSMLVGIPSRIEGKRCFASSTT--------ASSSSSSK-------SEY 60

Query: 61  MKSEYAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSAD 120
           MK EYAPIYIVMG V VA+TI THTAKQQL+HSPVV  SKKKRES+PEV+DPDTVI SAD
Sbjct: 61  MKGEYAPIYIVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSAD 120

Query: 121 KFINKSFLRKVAHIQDDTNTLTDPVHPDPFTRPRNAETLKTAGVNP 163
           KF+NKSFLRKVAHIQD   TL DP HPDPFTRPRNAETLKTAGV+P
Sbjct: 121 KFVNKSFLRKVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDP 147

[Close]

BLAST of Tan0000109 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-28
Identity = 58/104 (55.77%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 60  EYAPIYIVMGFVGVALTIATHTAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFI 119
           E+AP+ I+ GFVG+A+ +A H+ KQQLMH+P ++  K +R +V EV+DP+  ++SADKFI
Sbjct: 42  EFAPVAIIGGFVGLAVLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFI 101

Query: 120 NKSFLRKVAHIQDDTNT-LTDPVHPDPFTRPRNAETLKTAGVNP 163
           NKS+LRKV  IQD +   L+DP  P+PFT PRNAETL + GV P
Sbjct: 102 NKSWLRKVGQIQDKSKAILSDPTRPNPFTTPRNAETLNSVGVAP 145

[Close]

BLAST of Tan0000109 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 51/144 (35.42%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 23  RRLASSTTSASGVENNAANSSSSKSGG--SSGESEYMKSEYAPIYIVMGFVGVALTIATH 82
           +RL + T + +   + A ++++++ GG  ++  +   K ++ P+Y+ +G + +++T   +
Sbjct: 14  QRLRTYTKATTVPRSKAYSTAATEYGGQRTATTAAATKGDFTPVYVSIGLISLSVTFGVY 73

Query: 83  TAKQQLMHSPVVNFSKKKRESVPEVEDPDTVINSADKFINKSFLRKVAHIQ--DDTNTLT 142
           TA   L  +P V  +KK RE+VPE+EDPD V+N AD+F N+S+ RK+AH+Q  D  + ++
Sbjct: 74  TAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDKQDVIS 133

Query: 143 DPVHPDPFTRPRNAETLKTAGVNP 163
           DP+  D F     A TLK  GV+P
Sbjct: 134 DPIRKDQFAHKPRALTLKDVGVDP 157

The following BLAST results are available for this feature:

BLAST of Tan0000109 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459927.1	1.3e-55	75.61	PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]	[more]
XP_004140656.2	2.2e-55	73.17	uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical ...	[more]
XP_038906484.1	2.9e-55	72.46	uncharacterized protein LOC120092464 [Benincasa hispida]	[more]
KAA0039866.1	1.0e-52	78.77	putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24...	[more]
ADN33694.1	2.5e-51	78.08	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of Tan0000109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBE5	6.3e-56	75.61	uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=...	[more]
A0A0A0KC39	1.1e-55	73.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1	[more]
A0A5D3DLZ1	5.0e-53	78.77	Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=11...	[more]
E5GB52	1.2e-51	78.08	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1D5L1	8.3e-48	69.88	uncharacterized protein LOC111017496 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Tan0000109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63060.1	9.4e-28	55.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G07330.1	1.2e-19	35.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..165
None	No IPR available	PANTHER	PTHR33919:SF9	RIBOSOME BIOGENESIS NEP1-LIKE PROTEIN	coord: 1..164
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 1..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000109.1	Tan0000109.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane