Tan0000051 (gene) Snake gourd v1

Overview


Name	Tan0000051
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG04: 17744663 .. 17745273 (+)
RNA-Seq Expression	Tan0000051
Synteny	Tan0000051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCAGTCTTAGGCATCTGGGTTCGAGTAATAGCCCTCAACAATACTACTGGTCAAAAACACCAGACTCCAGAGGTAGGGGGCGATCCAGTCGTGGACGAGGTGGGACTTCAGACGCAAAAAAGCAGATGGAAGAGGAATAGGGAGACGAACCATACCAGAGCCCTAACATAACAGACTGAAACAATTTGAACGGGGGAGAAAGAACAGATTCGGTAGCGGGAGAACGAAATCTGAGGAAGGAGTCGGGCGGTGGCGGGAACGACGGGCAGTTTTCCGATGAGTTTCAGAGCATCTTAAATGTCATTAATTTCTCGGCTACAACGGCTACAATTGCGGATTCAACGGCAAGCTTGAAGGAGCATTCAAGGGCTTCGCGACGGATCCAGTCGGATCTTATTTTCGAGGTTTCAAAAAGTCTCCTCTTTGAGGATGAAATTAATAAGCTGACTGGCGAGAAATCAAGGGGAGCAGCTGGTTTCCAAAAGGAAATTATGGGCCCCTCACCAACAAAGGCAGTGACTGGAAACGACACTGTTGATCAAAAGGATGGTGGGGCCAAAAGACCAGGTCAAACTGCGGAGCCCAAATGCTGTGATGGGATCTAG

mRNA sequence

ATGGACCCAGTCTTAGGCATCTGGGTTCGAGTAATAGCCCTCAACAATACTACTGGTCAAAAACACCAGACTCCAGAGGTAGGGGGCGATCCAGTCGTGGACGAGGAGTCGGGCGGTGGCGGGAACGACGGGCAGTTTTCCGATGAGTTTCAGAGCATCTTAAATGTCATTAATTTCTCGGCTACAACGGCTACAATTGCGGATTCAACGGCAAGCTTGAAGGAGCATTCAAGGGCTTCGCGACGGATCCAGTCGGATCTTATTTTCGAGGTTTCAAAAAGTCTCCTCTTTGAGGATGAAATTAATAAGCTGACTGGCGAGAAATCAAGGGGAGCAGCTGGTTTCCAAAAGGAAATTATGGGCCCCTCACCAACAAAGGCAGTGACTGGAAACGACACTGTTGATCAAAAGGATGGTGGGGCCAAAAGACCAGGTCAAACTGCGGAGCCCAAATGCTGTGATGGGATCTAG

Coding sequence (CDS)

ATGGACCCAGTCTTAGGCATCTGGGTTCGAGTAATAGCCCTCAACAATACTACTGGTCAAAAACACCAGACTCCAGAGGTAGGGGGCGATCCAGTCGTGGACGAGGAGTCGGGCGGTGGCGGGAACGACGGGCAGTTTTCCGATGAGTTTCAGAGCATCTTAAATGTCATTAATTTCTCGGCTACAACGGCTACAATTGCGGATTCAACGGCAAGCTTGAAGGAGCATTCAAGGGCTTCGCGACGGATCCAGTCGGATCTTATTTTCGAGGTTTCAAAAAGTCTCCTCTTTGAGGATGAAATTAATAAGCTGACTGGCGAGAAATCAAGGGGAGCAGCTGGTTTCCAAAAGGAAATTATGGGCCCCTCACCAACAAAGGCAGTGACTGGAAACGACACTGTTGATCAAAAGGATGGTGGGGCCAAAAGACCAGGTCAAACTGCGGAGCCCAAATGCTGTGATGGGATCTAG

Protein sequence

MDPVLGIWVRVIALNNTTGQKHQTPEVGGDPVVDEESGGGGNDGQFSDEFQSILNVINFSATTATIADSTASLKEHSRASRRIQSDLIFEVSKSLLFEDEINKLTGEKSRGAAGFQKEIMGPSPTKAVTGNDTVDQKDGGAKRPGQTAEPKCCDGI

Homology

The following BLAST results are available for this feature:

BLAST of Tan0000051 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000051 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000051 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000051 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000051.1	Tan0000051.1	mRNA