Tan0000046 (gene) Snake gourd v1

Overview
NameTan0000046
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
LocationLG03: 59874670 .. 59877099 (+)
RNA-Seq ExpressionTan0000046
SyntenyTan0000046
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTACTTACTGTATCATGCATTATAATGAATGTTTTAATTACAATATGTATATTATATATATAGTTCAATATATACATAATATCCATTTGATTTTTTTGTTGTTTTTATTATATAGGGAGTTTTGTTGTACCTATGCTTTATGGTGGATATTGGAACGATTCTGATAATTTCATTGGTTACCAAGTATCTGATATTTCATTACATGATGGAATGAAATTCAGTCATTTACAACAATGTATCATTGAAACTTTGGGCAATGTAGGTCATATTCAAGCTCCCGACATATATGTTTGCATAGGATCACAATCATTCATTAAGAAAGATGCACAAATCAATACAGATGTTGATGTTCAATGGTTAATTACCATAATGACATACAATATAGATGAGTATTGTGCACTAGTTATTGATTACAAGAACGCCCTATCAGGTATGTTGGACAACGTATCCCATTCTGCCTCAAATACCAATTCCCACAGTGTACAAGGACGTGTTTTTCGTAACATTGATGTTACAAAGATATCGTCTAATTTTTCCATACATGTTGAAGATATATATATGTTGGTAAGGGTATATTACACAATGCCTTACGGGGTATTGCCATTAGAGATAGTTTTCAATATAAAACAGTAAAATCCAACAAGAAAATTCTGACTGTTCAATGTGTTAGTGAGAATTGTAAATGGTTGCTTAGAGCTTGTCGCTATGGAGACAATGACAGCGAATCATGGATTATTGTGAGGTTTGATAGTGAACATACATGTTCACTTGATATTGTTTTAATGGATCATAAGCAAGCTTCATACTCTGTCATAAAAGATTGTATTCAATCTTTGATTAACATAGATGGTAACTCGTTACCTACACCGAAGGAGATTAGAAATTATGTCCTTACTCAACATGGTTTAAGAATAAGCTATCAGAAAGCTTGGCGTGCACGTGAGTTAGCAATGAATGAAATTAGAGGTTCACCTGAGGACTCCTACAAAATGATTCCATCATTTGCATATATGTTAAAGATGACAAATCCAGGTATTATTCTTTTTAATATAAAATATATATTATAATAACTTTCGGATATAACATATATACATACGATTAAATACATAATAACATTCTAATATATCAAATATATGGCAGGTTCCATCACTGAACTTAAACTTGATGATGATGGAAGGTTCAAGTTCTTCTTTATGGCATTTGCTGCTTGTATCAATGGTTGGAAACACTGTCGACCAGTTATTTCTGTTGATGGCACTCATTTGAAGAATAAATATGTCGGTACCTTAATAACAACTTCTGCATATGATCCTAATGATCAAATTTTTTCCTATAGCCTTTTGCATTGTTGTTTCTGAGAATGATAATTCCTGGTTATGGTTCTTCTCTCAACTAAAACAAATAGTCCTAGAACAGAATGACCTCGTGATTGTATCTGATAGACACAAAAGTATTGGCAAGGTTGTTCAGATTGCATTCCCCAATGCATTCCATTGCATATGCATGTTTCATCTGTTGAAGAACCTAAAGCTCATATACAAGTTGAAGATTAATGATACTATTTTTTACGCATGTGCGAAAGCATTTAATGTTGTTGATTTTGAAGCTCAGATGCGTCAATTGGAGTTGGGTGCTCGAGGTATTCGTAATAAATTACTTACCATAGGATTTGCAAAATGGTCTCGTGCCTTCTCACCCTGTAGTCGATATAAGATGATGACCACTAGTATTTCTGAAAGTCTCAATGCTGCCATAAAGAAAGCACGTGATTTACCTATTGTGTCCATGTTGGAGGTCCTCAGAATGACTATGCAAAGATGGTTTTACGAAAGGAGAAATGATTGTGCTTTTTAAGTTACTACTTTTACAAAAGCCACTGAAGAACATTTAAGGGAGCAAATACAGATGACTCGTTTTATGAAGGTAAGTTATCAATATTTATATATCAACCACTTTATAATCTATATTCTATTAATGATATGGCATATACCCCAAGTGAATCCAATAGACAATATTGAATATCAAGTGATAGATCAGACTCGTCAATACAATGTGCATCTTGCAAAGAAGAGATGCAGTTGCAGAATGTGGGACACATTGCAGATACCTTGCTCTCATGTATGTGCTGTTTTGACAACCGAAATACATATCGACCAAGGAATATATCTCACCATATTACTTGAACACTACACTTTCATCAATATATAGTGGGTTGTTATATCCACTAGGTCATGAAGATAGTAGGGTTATTCCAGAAGATGTGCAACAAACCGTTGTTCTCCCGCCAAACGTGAAACGGTCGGTTGGTAGGCCGAAGAAGAATAGAATTCCTTCACAAATCGAGTTTAAGAGACGTGTTAAATGTGGTCGATATGGAAAACTTGATCACAATAGAAAGTCTTGCAGATTTGCTCTTACACAATAA

mRNA sequence

ATGTGGAGTTTTGTTGTACCTATGCTTTATGGTGGATATTGGAACGATTCTGATAATTTCATTGGTTACCAAGTATCTGATATTTCATTACATGATGGAATGAAATTCAGTCATTTACAACAATGTATCATTGAAACTTTGGGCAATGTAGATGAGTATTGTGCACTAGTTATTGATTACAAGAACGCCCTATCAGGTATGTTGGACAACGTATCCCATTCTGCCTCAAATACCAATTCCCACAGTGTACAAGGACGTGTTTTTCGTAACATTGATGTTACAAAGATATCGTCTAATTTTTCCATACATGTTGAAGATATATATATAGATAGTTTTCAATATAAAACAGTAAAATCCAACAAGAAAATTCTGACTGTTCAATGTGTTAGTGAGAATTGTAAATGGTTGCTTAGAGCTTGTCGCTATGGAGACAATGACAGCGAATCATGGATTATTGTGAGGTTTGATAGTGAACATACATGTTCACTTGATATTGTTTTAATGGATCATAAGCAAGCTTCATACTCTGTCATAAAAGATTGTATTCAATCTTTGATTAACATAGATGGTAACTCGTTACCTACACCGAAGGAGATTAGAAATTATGTCCTTACTCAACATGGTTTAAGAATAAGCTATCAGAAAGCTTGGCGTGCACGTGAGTTAGCAATGAATGAAATTAGAGGTTCACCTGAGGACTCCTACAAAATGATTCCATCATTTGCATATATGTTAAAGATGACAAATCCAGGTTCCATCACTGAACTTAAACTTGATGATGATGGAAGGTTCAAGTTCTTCTTTATGGCATTTGCTGCTTGTATCAATGGTTGGAAACACTGTCGACCAGTTATTTCTATGCGTCAATTGGAGTTGGGTGCTCGAGGTATTCGTAATAAATTACTTACCATAGGATTTGCAAAATGGTCTCGTGCCTTCTCACCCTGTAGTCGATATAAGATGATGACCACTAGTATTTCTGAAAGTCTCAATGCTGCCATAAAGAAAGCACGTGATTTACCTATTGTGTCCATGTTGGAGACTCGTCAATACAATGTGCATCTTGCAAAGAAGAGATGCAGTTGCAGAATGTGGGACACATTGCAGATACCTTGCTCTCATGTATGTGCTGAATATATCTCACCATATTACTTGAACACTACACTTTCATCAATATATAGTGGGTTGTTATATCCACTAGGTCATGAAGATAGTAGGGTTATTCCAGAAGATGTGCAACAAACCGTTGTTCTCCCGCCAAACGTGAAACGGTCGGTTGGTAGGCCGAAGAAGAATAGAATTCCTTCACAAATCGAGTTTAAGAGACGTGTTAAATGTGGTCGATATGGAAAACTTGATCACAATAGAAAGTCTTGCAGATTTGCTCTTACACAATAA

Coding sequence (CDS)

ATGTGGAGTTTTGTTGTACCTATGCTTTATGGTGGATATTGGAACGATTCTGATAATTTCATTGGTTACCAAGTATCTGATATTTCATTACATGATGGAATGAAATTCAGTCATTTACAACAATGTATCATTGAAACTTTGGGCAATGTAGATGAGTATTGTGCACTAGTTATTGATTACAAGAACGCCCTATCAGGTATGTTGGACAACGTATCCCATTCTGCCTCAAATACCAATTCCCACAGTGTACAAGGACGTGTTTTTCGTAACATTGATGTTACAAAGATATCGTCTAATTTTTCCATACATGTTGAAGATATATATATAGATAGTTTTCAATATAAAACAGTAAAATCCAACAAGAAAATTCTGACTGTTCAATGTGTTAGTGAGAATTGTAAATGGTTGCTTAGAGCTTGTCGCTATGGAGACAATGACAGCGAATCATGGATTATTGTGAGGTTTGATAGTGAACATACATGTTCACTTGATATTGTTTTAATGGATCATAAGCAAGCTTCATACTCTGTCATAAAAGATTGTATTCAATCTTTGATTAACATAGATGGTAACTCGTTACCTACACCGAAGGAGATTAGAAATTATGTCCTTACTCAACATGGTTTAAGAATAAGCTATCAGAAAGCTTGGCGTGCACGTGAGTTAGCAATGAATGAAATTAGAGGTTCACCTGAGGACTCCTACAAAATGATTCCATCATTTGCATATATGTTAAAGATGACAAATCCAGGTTCCATCACTGAACTTAAACTTGATGATGATGGAAGGTTCAAGTTCTTCTTTATGGCATTTGCTGCTTGTATCAATGGTTGGAAACACTGTCGACCAGTTATTTCTATGCGTCAATTGGAGTTGGGTGCTCGAGGTATTCGTAATAAATTACTTACCATAGGATTTGCAAAATGGTCTCGTGCCTTCTCACCCTGTAGTCGATATAAGATGATGACCACTAGTATTTCTGAAAGTCTCAATGCTGCCATAAAGAAAGCACGTGATTTACCTATTGTGTCCATGTTGGAGACTCGTCAATACAATGTGCATCTTGCAAAGAAGAGATGCAGTTGCAGAATGTGGGACACATTGCAGATACCTTGCTCTCATGTATGTGCTGAATATATCTCACCATATTACTTGAACACTACACTTTCATCAATATATAGTGGGTTGTTATATCCACTAGGTCATGAAGATAGTAGGGTTATTCCAGAAGATGTGCAACAAACCGTTGTTCTCCCGCCAAACGTGAAACGGTCGGTTGGTAGGCCGAAGAAGAATAGAATTCCTTCACAAATCGAGTTTAAGAGACGTGTTAAATGTGGTCGATATGGAAAACTTGATCACAATAGAAAGTCTTGCAGATTTGCTCTTACACAATAA

Protein sequence

MWSFVVPMLYGGYWNDSDNFIGYQVSDISLHDGMKFSHLQQCIIETLGNVDEYCALVIDYKNALSGMLDNVSHSASNTNSHSVQGRVFRNIDVTKISSNFSIHVEDIYIDSFQYKTVKSNKKILTVQCVSENCKWLLRACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPKEIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELKLDDDGRFKFFFMAFAACINGWKHCRPVISMRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDLPIVSMLETRQYNVHLAKKRCSCRMWDTLQIPCSHVCAEYISPYYLNTTLSSIYSGLLYPLGHEDSRVIPEDVQQTVVLPPNVKRSVGRPKKNRIPSQIEFKRRVKCGRYGKLDHNRKSCRFALTQ
Homology
BLAST of Tan0000046 vs. NCBI nr
Match: XP_022155207.1 (uncharacterized protein LOC111022347 [Momordica charantia])

HSP 1 Score: 382.9 bits (982), Expect = 4.0e-102
Identity = 223/574 (38.85%), Postives = 321/574 (55.92%), Query Frame = 0

Query: 8   MLYGGYWNDSDNFIGYQVSDISLHDGMKFSHLQQCIIETLG------------------- 67
           M +GG+WND DN++ Y+VS++ +H  M ++ L + I+E LG                   
Sbjct: 3   MFHGGFWNDRDNYVEYKVSELIIHQEMSYAKLLKDIMEQLGLVGSSDYPDIFSCIGTTQF 62

Query: 68  ---------------------NVDEYCALVIDYKNALSGMLDN--VSHSASNTNSHSVQG 127
                                 V + C+LV+D +N LS +LD   ++ S+S  N     G
Sbjct: 63  MKDMKISDDKDVHWLYNVIFNGVAQCCSLVVDCRNCLSNVLDRMPINTSSSIDNGIPSIG 122

Query: 128 RVFRNIDVTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVS 187
           +   +IDVT I  NF I V D +                D+FQ++T+KSN+ +L V+   
Sbjct: 123 QFHYSIDVTNILRNFHIEVNDKFCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFFM 182

Query: 188 ENCKWLLRACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDG 247
           +NC+W L A ++GD  SE WI+ +F  EHTCSL+IVL DH+QA++SVIK+ I+   N+ G
Sbjct: 183 DNCQWYLHASKFGDQGSEIWIVKKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMFG 242

Query: 248 NSLPTPKEIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNP 307
             L + K++ ++V    G+ I+YQKAWR R+ A+ EI+GSPE+SY ++PSF +M+K+ NP
Sbjct: 243 TDLLSVKDVISHVRRGLGISINYQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKNP 302

Query: 308 GSITELKLDDDGRFKFFFMAFAACINGWKHCRPV---ISMRQ-----------LELGARG 367
           GS+ + K+D+ GRF + FMA ++ I+G+++CRP+   I  RQ           +   A  
Sbjct: 303 GSVCDFKVDNHGRFHYLFMALSSSIDGYQYCRPLKPCIGPRQDLVTVFDRHKSIVKSAEK 362

Query: 368 I----------------RNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDL 427
           +                  +L  IGF+KWS A+SP SRY  MTT+IS+SLNAA+K A +L
Sbjct: 363 VFTTACHCICAFYCTRHSEELSGIGFSKWSYAYSPSSRYNFMTTNISKSLNAAMKDAMEL 422

Query: 428 PIVSMLE------------------------TRQYNVHLAKKRCSCRMWDTL----QIPC 466
           PI SMLE                        T+     L+++  +CR          I  
Sbjct: 423 PITSMLEVVRMMLQRWFYKRQNDVDFQITKFTKSAESKLSEQISACRTMKVYAVNNDIYQ 482

BLAST of Tan0000046 vs. NCBI nr
Match: XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia])

HSP 1 Score: 298.5 bits (763), Expect = 9.9e-77
Identity = 194/557 (34.83%), Postives = 265/557 (47.58%), Query Frame = 0

Query: 54  CALVIDYKNALSGMLDNVSHSASNTNSHSVQ--GRVFRNIDVTKISSNFSIHVEDIYI-- 113
           C+LV+D +N LS +LD +  + S++  + +Q  G+ +R IDV  IS+ F I V D +   
Sbjct: 62  CSLVVDCRNCLSNILDXMPINTSSSMDNGIQSFGQFYRXIDVANISATFHIXVNDKFCGK 121

Query: 114 -------------DSFQYKTVKSNKKILTVQCVSENCKWLLRACRYGDNDSESWIIVRFD 173
                         +F ++TVKSN+++L V C++ NC+W L A ++GD  SE WI+ +F 
Sbjct: 122 RNLQNALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIVKKFV 181

Query: 174 SEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPKEIRNYVLTQHGLRISYQKA 233
            EHTCSL+IVL DH+QA++SVIK+ I+  IN  G  LP+ K+  ++V  +  + I+YQKA
Sbjct: 182 HEHTCSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISINYQKA 241

Query: 234 WRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELKLDDDGRFKFFFMAFAACIN 293
             ARE A+ EIRGSPE SY +IP F +M+K  NPGS+ + K D++GRF++ FMA ++ I+
Sbjct: 242 XXAREXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFZYJFMAXSSSIS 301

Query: 294 GWKHCRPVIS-------------------------------------------------- 353
           GWK+C PVIS                                                  
Sbjct: 302 GWKYCXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFFEQLK 361

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 362 RCIGVRQDLVIVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLFFPCA 421

Query: 414 -----------MRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIK 435
                      MR L+   RGIR +L  IGF+KWS AFS  SRY  MTT+ISESLNAA+K
Sbjct: 422 KAYNVEDFEDNMRLLDSTVRGIREELSVIGFSKWSCAFSSSSRYNFMTTNISESLNAAMK 481

BLAST of Tan0000046 vs. NCBI nr
Match: XP_008463110.1 (PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 5.1e-73
Identity = 173/464 (37.28%), Postives = 247/464 (53.23%), Query Frame = 0

Query: 93  VTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSENCKWLL 152
           ++K+ SNF++ V+D++                D+FQY  VKSNK+++ +QC  ENCKW L
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 153 RACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPK 212
           RA      D   W++ RFD EHT S+D+ L DH+QA+++VIKD I++ I++ G+ L TPK
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 213 EIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELK 272
            I +++  +HGL ISYQKAWRA ++A+++IRGS EDSYKM+P FAY+L++ N GS+ E K
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYK 180

Query: 273 LDDDGRFKFFFMAFAACINGWKHCRPVI-------------------------------- 332
           +D D RF +FFMA +A I+GW+HC  VI                                
Sbjct: 181 VDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAF 240

Query: 333 -------------------------------SMRQLELGARGIRNKLLTIGFAKWSRAFS 392
                                          S R  +  A GIR +L  IGFAKWSRA+S
Sbjct: 241 CVVDSKNDSSWTWFSNQMKRIIGGRNEVVIVSNRHKKSSAPGIREELEPIGFAKWSRAYS 300

Query: 393 PCSRYKMMTTSISESLNAAIKKARDLPIVSMLETRQ---------------YNVHLAKKR 452
           P  RY +MTT+ISESLN+A+ KA++LPI SMLE  +               Y V    K 
Sbjct: 301 PRRRYNVMTTNISESLNSAMLKAKELPICSMLEVLRMMLQIWFFERRNEVDYQVTNFTKT 360

Query: 453 CSCRMWDTLQIPCSHVCAEYISPYYLNTTLSSIYSGLL------YPLGHEDSRVIPEDVQ 458
               + D ++   S       +  Y     +S Y   L      + + H   +++   + 
Sbjct: 361 IEGTLRDQIERSRSMKVNSVNNMKYQAIDETSQYVIYLPTKHFEFTMKHLSIKLLRGRMT 420

BLAST of Tan0000046 vs. NCBI nr
Match: KAA0039149.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 4.8e-71
Identity = 176/499 (35.27%), Postives = 249/499 (49.90%), Query Frame = 0

Query: 93  VTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSENCKWLL 152
           ++K+ SNF++ V+D++                D+FQY  VKSNK+++ +QC  ENCKW L
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 153 RACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPK 212
           RA      D   W++ RFD EHT S+D+ L DH+QA+++VIKD I++ I++ G+ L TPK
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 213 EIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELK 272
            I +++  +HGL ISYQKAWRA ++A+++IRGS EDSYKM+P FAY+L++ N GS+ E K
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYK 180

Query: 273 LDDDGRFKFFFMAFAACINGWKHCRPVI-------------------------------- 332
           +D D RF +FFMA +A I+GW+HC  VI                                
Sbjct: 181 VDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAF 240

Query: 333 ------------------------------------------------------------ 392
                                                                       
Sbjct: 241 CVVDSKNDSSWTWFSNQMKRIIGGRNEVVIVSNRHKRTSSWRVVDTIFHACEKTFNIVNF 300

Query: 393 --SMRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDLPIV 452
              MR LE  A GIR +L  IGFAKWSRA+SP  RY +MTT+ISESLN+A+ KA++LPI 
Sbjct: 301 KHEMRLLESSAPGIREELEPIGFAKWSRAYSPRRRYNVMTTNISESLNSAMLKAKELPIC 360

Query: 453 SMLETRQ---------------YNVHLAKKRCSCRMWDTLQIPCSHVCAEYISPYYLNTT 462
           SMLE  +               Y V    K     + D ++   S       +  Y    
Sbjct: 361 SMLEVLRMMLQIWFFERRNEVDYQVTNFTKTIEGTLRDQIERSRSMKVNSVNNMKYQAID 420

BLAST of Tan0000046 vs. NCBI nr
Match: TYJ96591.1 (uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 252.3 bits (643), Expect = 8.2e-63
Identity = 154/485 (31.75%), Postives = 232/485 (47.84%), Query Frame = 0

Query: 87  VFRNIDVTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSE 146
           +FR++D+T      +   +D++                 +F++KT++SN + + ++C  +
Sbjct: 127 IFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKTLRSNSRSIELRCNED 186

Query: 147 NCKWLLRACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGN 206
            C W +RA RY    SE W+I ++ S+H+CS+ IV   HKQAS   +  C+   +     
Sbjct: 187 GCLWFVRASRY--KRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRY-SY 246

Query: 207 SLPTPKEIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPG 266
           S  TPK+I +++   +G+ +SY KAWRA+E  M  ++G  +DSY +IP F   LK  NPG
Sbjct: 247 SHSTPKDIIHHMRMNYGVSVSYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINPG 306

Query: 267 SITELKLDDDGRFKFFFMAFAACINGWKHCRPVIS------------------------- 326
           S T  ++D +G FK+ FMA A+ I GW++CRP I+                         
Sbjct: 307 SFTAYEIDPNGHFKYCFMAIASSIEGWRYCRPNIAVDGTFLKCKYGGTLLTAATMDDDFE 366

Query: 327 --MRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDLPIVS 386
             MR +E     IR  L+ +GF +WSRA+S   RY++MTT+I ESLN+ +K  RDLP+ S
Sbjct: 367 LYMRWMESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVAS 426

Query: 387 MLET-------------------------------------------------------- 446
           +LE                                                         
Sbjct: 427 LLEAIREFLQRWFYERRKAASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDG 486

Query: 447 -RQYNVHLAKKRCSCRMWDTLQIPCSHVCA----------EYISPYYLNTTLSSIYSGLL 462
            + + V L    CSC  WD  +IPC+H              ++S YY  T LS+ Y GL+
Sbjct: 487 GKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLV 546

BLAST of Tan0000046 vs. ExPASy TrEMBL
Match: A0A6J1DNQ8 (uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022347 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 223/574 (38.85%), Postives = 321/574 (55.92%), Query Frame = 0

Query: 8   MLYGGYWNDSDNFIGYQVSDISLHDGMKFSHLQQCIIETLG------------------- 67
           M +GG+WND DN++ Y+VS++ +H  M ++ L + I+E LG                   
Sbjct: 3   MFHGGFWNDRDNYVEYKVSELIIHQEMSYAKLLKDIMEQLGLVGSSDYPDIFSCIGTTQF 62

Query: 68  ---------------------NVDEYCALVIDYKNALSGMLDN--VSHSASNTNSHSVQG 127
                                 V + C+LV+D +N LS +LD   ++ S+S  N     G
Sbjct: 63  MKDMKISDDKDVHWLYNVIFNGVAQCCSLVVDCRNCLSNVLDRMPINTSSSIDNGIPSIG 122

Query: 128 RVFRNIDVTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVS 187
           +   +IDVT I  NF I V D +                D+FQ++T+KSN+ +L V+   
Sbjct: 123 QFHYSIDVTNILRNFHIEVNDKFCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFFM 182

Query: 188 ENCKWLLRACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDG 247
           +NC+W L A ++GD  SE WI+ +F  EHTCSL+IVL DH+QA++SVIK+ I+   N+ G
Sbjct: 183 DNCQWYLHASKFGDQGSEIWIVKKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMFG 242

Query: 248 NSLPTPKEIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNP 307
             L + K++ ++V    G+ I+YQKAWR R+ A+ EI+GSPE+SY ++PSF +M+K+ NP
Sbjct: 243 TDLLSVKDVISHVRRGLGISINYQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKNP 302

Query: 308 GSITELKLDDDGRFKFFFMAFAACINGWKHCRPV---ISMRQ-----------LELGARG 367
           GS+ + K+D+ GRF + FMA ++ I+G+++CRP+   I  RQ           +   A  
Sbjct: 303 GSVCDFKVDNHGRFHYLFMALSSSIDGYQYCRPLKPCIGPRQDLVTVFDRHKSIVKSAEK 362

Query: 368 I----------------RNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDL 427
           +                  +L  IGF+KWS A+SP SRY  MTT+IS+SLNAA+K A +L
Sbjct: 363 VFTTACHCICAFYCTRHSEELSGIGFSKWSYAYSPSSRYNFMTTNISKSLNAAMKDAMEL 422

Query: 428 PIVSMLE------------------------TRQYNVHLAKKRCSCRMWDTL----QIPC 466
           PI SMLE                        T+     L+++  +CR          I  
Sbjct: 423 PITSMLEVVRMMLQRWFYKRQNDVDFQITKFTKSAESKLSEQISACRTMKVYAVNNDIYQ 482

BLAST of Tan0000046 vs. ExPASy TrEMBL
Match: A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-77
Identity = 194/557 (34.83%), Postives = 265/557 (47.58%), Query Frame = 0

Query: 54  CALVIDYKNALSGMLDNVSHSASNTNSHSVQ--GRVFRNIDVTKISSNFSIHVEDIYI-- 113
           C+LV+D +N LS +LD +  + S++  + +Q  G+ +R IDV  IS+ F I V D +   
Sbjct: 62  CSLVVDCRNCLSNILDXMPINTSSSMDNGIQSFGQFYRXIDVANISATFHIXVNDKFCGK 121

Query: 114 -------------DSFQYKTVKSNKKILTVQCVSENCKWLLRACRYGDNDSESWIIVRFD 173
                         +F ++TVKSN+++L V C++ NC+W L A ++GD  SE WI+ +F 
Sbjct: 122 RNLQNALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIVKKFV 181

Query: 174 SEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPKEIRNYVLTQHGLRISYQKA 233
            EHTCSL+IVL DH+QA++SVIK+ I+  IN  G  LP+ K+  ++V  +  + I+YQKA
Sbjct: 182 HEHTCSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISINYQKA 241

Query: 234 WRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELKLDDDGRFKFFFMAFAACIN 293
             ARE A+ EIRGSPE SY +IP F +M+K  NPGS+ + K D++GRF++ FMA ++ I+
Sbjct: 242 XXAREXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFEYLFMAXSSSIS 301

Query: 294 GWKHCRPVIS-------------------------------------------------- 353
           GWK+C PVIS                                                  
Sbjct: 302 GWKYCXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFFEQLK 361

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 362 RCIGVRQDLVIVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLFFPCA 421

Query: 414 -----------MRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIK 435
                      MR L+   RGIR +L  IGF+KWS AFS  SRY  MTT+ISESLNAA+K
Sbjct: 422 KAYNVEDFEDNMRLLDSTVRGIREELSVIGFSKWSCAFSSSSRYNFMTTNISESLNAAMK 481

BLAST of Tan0000046 vs. ExPASy TrEMBL
Match: A0A1S3CIV7 (uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.5e-73
Identity = 173/464 (37.28%), Postives = 247/464 (53.23%), Query Frame = 0

Query: 93  VTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSENCKWLL 152
           ++K+ SNF++ V+D++                D+FQY  VKSNK+++ +QC  ENCKW L
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 153 RACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPK 212
           RA      D   W++ RFD EHT S+D+ L DH+QA+++VIKD I++ I++ G+ L TPK
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 213 EIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELK 272
            I +++  +HGL ISYQKAWRA ++A+++IRGS EDSYKM+P FAY+L++ N GS+ E K
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYK 180

Query: 273 LDDDGRFKFFFMAFAACINGWKHCRPVI-------------------------------- 332
           +D D RF +FFMA +A I+GW+HC  VI                                
Sbjct: 181 VDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAF 240

Query: 333 -------------------------------SMRQLELGARGIRNKLLTIGFAKWSRAFS 392
                                          S R  +  A GIR +L  IGFAKWSRA+S
Sbjct: 241 CVVDSKNDSSWTWFSNQMKRIIGGRNEVVIVSNRHKKSSAPGIREELEPIGFAKWSRAYS 300

Query: 393 PCSRYKMMTTSISESLNAAIKKARDLPIVSMLETRQ---------------YNVHLAKKR 452
           P  RY +MTT+ISESLN+A+ KA++LPI SMLE  +               Y V    K 
Sbjct: 301 PRRRYNVMTTNISESLNSAMLKAKELPICSMLEVLRMMLQIWFFERRNEVDYQVTNFTKT 360

Query: 453 CSCRMWDTLQIPCSHVCAEYISPYYLNTTLSSIYSGLL------YPLGHEDSRVIPEDVQ 458
               + D ++   S       +  Y     +S Y   L      + + H   +++   + 
Sbjct: 361 IEGTLRDQIERSRSMKVNSVNNMKYQAIDETSQYVIYLPTKHFEFTMKHLSIKLLRGRMT 420

BLAST of Tan0000046 vs. ExPASy TrEMBL
Match: A0A5A7TCZ3 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00480 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.3e-71
Identity = 176/499 (35.27%), Postives = 249/499 (49.90%), Query Frame = 0

Query: 93  VTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSENCKWLL 152
           ++K+ SNF++ V+D++                D+FQY  VKSNK+++ +QC  ENCKW L
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 153 RACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGNSLPTPK 212
           RA      D   W++ RFD EHT S+D+ L DH+QA+++VIKD I++ I++ G+ L TPK
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 213 EIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPGSITELK 272
            I +++  +HGL ISYQKAWRA ++A+++IRGS EDSYKM+P FAY+L++ N GS+ E K
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYK 180

Query: 273 LDDDGRFKFFFMAFAACINGWKHCRPVI-------------------------------- 332
           +D D RF +FFMA +A I+GW+HC  VI                                
Sbjct: 181 VDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAF 240

Query: 333 ------------------------------------------------------------ 392
                                                                       
Sbjct: 241 CVVDSKNDSSWTWFSNQMKRIIGGRNEVVIVSNRHKRTSSWRVVDTIFHACEKTFNIVNF 300

Query: 393 --SMRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDLPIV 452
              MR LE  A GIR +L  IGFAKWSRA+SP  RY +MTT+ISESLN+A+ KA++LPI 
Sbjct: 301 KHEMRLLESSAPGIREELEPIGFAKWSRAYSPRRRYNVMTTNISESLNSAMLKAKELPIC 360

Query: 453 SMLETRQ---------------YNVHLAKKRCSCRMWDTLQIPCSHVCAEYISPYYLNTT 462
           SMLE  +               Y V    K     + D ++   S       +  Y    
Sbjct: 361 SMLEVLRMMLQIWFFERRNEVDYQVTNFTKTIEGTLRDQIERSRSMKVNSVNNMKYQAID 420

BLAST of Tan0000046 vs. ExPASy TrEMBL
Match: A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.0e-63
Identity = 154/485 (31.75%), Postives = 232/485 (47.84%), Query Frame = 0

Query: 87  VFRNIDVTKISSNFSIHVEDIYI---------------DSFQYKTVKSNKKILTVQCVSE 146
           +FR++D+T      +   +D++                 +F++KT++SN + + ++C  +
Sbjct: 127 IFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKTLRSNSRSIELRCNED 186

Query: 147 NCKWLLRACRYGDNDSESWIIVRFDSEHTCSLDIVLMDHKQASYSVIKDCIQSLINIDGN 206
            C W +RA RY    SE W+I ++ S+H+CS+ IV   HKQAS   +  C+   +     
Sbjct: 187 GCLWFVRASRY--KRSELWMIRKYVSDHSCSM-IVHSSHKQASSEFVSHCMIDYLRY-SY 246

Query: 207 SLPTPKEIRNYVLTQHGLRISYQKAWRARELAMNEIRGSPEDSYKMIPSFAYMLKMTNPG 266
           S  TPK+I +++   +G+ +SY KAWRA+E  M  ++G  +DSY +IP F   LK  NPG
Sbjct: 247 SHSTPKDIIHHMRMNYGVSVSYYKAWRAKESVMKLLKGDADDSYALIPKFFSKLKEINPG 306

Query: 267 SITELKLDDDGRFKFFFMAFAACINGWKHCRPVIS------------------------- 326
           S T  ++D +G FK+ FMA A+ I GW++CRP I+                         
Sbjct: 307 SFTAYEIDPNGHFKYCFMAIASSIEGWRYCRPNIAVDGTFLKCKYGGTLLTAATMDDDFE 366

Query: 327 --MRQLELGARGIRNKLLTIGFAKWSRAFSPCSRYKMMTTSISESLNAAIKKARDLPIVS 386
             MR +E     IR  L+ +GF +WSRA+S   RY++MTT+I ESLN+ +K  RDLP+ S
Sbjct: 367 LYMRWMESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVAS 426

Query: 387 MLET-------------------------------------------------------- 446
           +LE                                                         
Sbjct: 427 LLEAIREFLQRWFYERRKAASCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDG 486

Query: 447 -RQYNVHLAKKRCSCRMWDTLQIPCSHVCA----------EYISPYYLNTTLSSIYSGLL 462
            + + V L    CSC  WD  +IPC+H              ++S YY  T LS+ Y GL+
Sbjct: 487 GKNFLVKLNCNSCSCLFWDLEEIPCAHALIVIRSLNLNPYAFVSQYYYATVLSATYGGLV 546

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022155207.14.0e-10238.85uncharacterized protein LOC111022347 [Momordica charantia][more]
XP_022134813.19.9e-7734.83uncharacterized protein LOC111006994 [Momordica charantia][more]
XP_008463110.15.1e-7337.28PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo][more]
KAA0039149.14.8e-7135.27protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
TYJ96591.18.2e-6331.75uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1DNQ81.9e-10238.85uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1C3284.8e-7734.83uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A1S3CIV72.5e-7337.28uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=... [more]
A0A5A7TCZ32.3e-7135.27Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BD684.0e-6331.75SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 358..386
e-value: 0.0053
score: 22.1
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 112..142
e-value: 4.5E-5
score: 23.3
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 349..377
e-value: 7.8E-6
score: 25.4
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 351..383
score: 9.779547
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 309..459
coord: 112..285
NoneNo IPR availablePANTHERPTHR31973:SF153FAMILY TRANSPOSASE, PUTATIVE ISOFORM 1-RELATEDcoord: 309..459
coord: 112..285

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000046.1Tan0000046.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding