Tan0000016 (gene) Snake gourd v1

Overview
NameTan0000016
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
LocationLG02: 39600148 .. 39619981 (+)
RNA-Seq ExpressionTan0000016
SyntenyTan0000016
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAAAGCTTATTGAATTTCCTACAACTTTCGTGAAGAATTCGTGAATAGAAAATGACTGTAAGATGTTGTAATTAGCAGGTCAAGTTTCGGGTTGCAGCAGAAAATCGAATCTGGAATAGCAGAAGTTAGTTCCGGGGAAAGGAGCTTTCGAGGTATTTCTGAACCAATCTATTGGGAATCGCATTTTCATGTCTTCATACGAGTTTTAGAAGGTTCAAAAAGGAAGAGTTTGGTATAAAGTACATTATTTTTGGATAAGTAATAAAGAAGTTATGAGTATCTGAATACAGGGCATAAAATCTGTTAAATGCTGGAATTTTTGTTGGAGTGTTTTCTTGTAGTTTAAAGGTTAAAAACCATGAGCTTGAGGTTCTAAAACATGGTTTTGGTTTGTTTGACAGGCCAAGAACAAAAGGTCGAGTGTACGGGTCAAGACTTTAGTTCTAACACTGTGAGTGACAAACGAACCTTGAAAATGGTTTATAGGCTTGTATTATGCTTATGAAATGCAAGGTTTTGCTAAAACGAAATGGTTTAGATGTTTATTGTTTTCTTGAACACTTGTTTATGAGCATTCATGATTTCTTAGAAATGTTTTAAAGTGTTCATGATGAGCCTAAAAGTCTTTATAAAGTTTATACATGAGCATATGTCCAATGGTTGCCAAAACTTATGAAAATGTGATGATTTCAAGCAAGCATGTACTAGCAAGTATGTTTTAAAGATTTCCAGTTTTATGAACAAGCTAAGTAAGCTTGAGTTTTATGAAAGAAAAAGATAAGCTGGCATGTTCAAATGTTTTCATGTGATCTTCTAAGATATTGAGCCCGAGGCTATGTAGTACCGTAGTGCACACAGTAGTCTTATTCTCGTTGTCGACGTTGAGTGTACTCGTGACAACAACATTGTTGCGTGAGTGTTGGGCGGGCCCCACTCGACAAAAGACGATGGGAGTAATGGGCGGGCCCCACTACATCGTAGAATAAACGTTGGTGTCTCGGGCGTGCCCTACACAACGTAGGCTCGTGACATGTTTTAAAAAGAGTTTATATCATTTACATGCCTTACGAGATTTTAACGGTGTCTTGCTTGTTTTCATGAAAAGCTATAATGTTTACACGATTACTTTTAACGCTTGATTACGGATGCATATGCTCATAGATGGCGTGTGATATGATTTACGAGTTAATAGCTTTCTTTTAAACTCAAGTCACTCATCGAGCTTCATAGCTCATTCTTCCATGTTTTTCCCACTTTTCGGTGAGAGATCGAGCTCCCGGTGCACGAGAACCTCGCCATAGTCTGTTTGAAGCTTCACATGTTGATATTTTGCGTACGTGGTGGTGTGGTTTAGCAAGTCCATATGTCTCAGTAAATTATTTTAAGAGAACTATGTAATTATAGTCGTATGTGCTTTAGAGGTTGTGGTTGCTTAATTAGTGGTTTGGATTGTTTGTGGTTCGATGTTCTTGCTCATCTTAGTTTCCAAGAGAGACTTAAGAAGAGTTTCTCCTCATGTACGCCTTATAGATGTCCAGTTTCACTGAGTTAAGTTAAAAGTGTTCCATATGCGAACATAGTTTGTTTTCGTGTAATGTAGTGTCGCAGGTATTGTTAAGAGGTAACAATGTCATTGGCTTCATGTCGCCTCTCTGGCTAAGTTAGCAAGTGGTTCGGAGAGGGTGTGACAACTTGGTATCGTGAGCGCTTAGCTCCATGGGAATGAGACAGAGCAAGTTAGCTCTAGAAGAAACTAAAAAGTAAATAGCAAGTTATTGAGTTAGTTCAATAGAACTAGCAGAGCATGGTCCAAATAAGGACAAGAGTAAGTCCAATCAGACTAGAATGTGAACACAAGTCTAGAATTGTGCATTTGAGTTGAGTACTCATTACATGTCTAGTATGTTAATATGTTATAGAAGTCATGCCACCACGTACTAGCGAGGCGATGCAGAGCAAGATCGGGGCGGGGCGCGGGATCCTACCCAAGATCAATCCCGGTGGAGATCTAGTGCCTCAAGAGTTCAGATAGGGGCGAGTGCGGCGTGCTAATTCCTCACACGAGGTAGGTAGGTAAGCCATAGAGAAGCGAGGGTTAAGTAATCCGGATAAGACATATAGAATAGATCACCTAAAAGAATTAGGAGCCACAAAGTGTTTGAGGGTTCCAAAGATCCATTGAAGAGCGAGGTTTGGCTAAATAAGCTTGATAAATTGTTTTGATGTTATGAGTTGCTCTCGAGGAGCGAAATGTTAAGTTGGCCACATTCTTGCTAAAGAAGGTAGTAGAAGAATGATGGAAATCGATGTTAGCTTGATTGTAGTGATGCACGTACTTCACACCGCAAACTTTCGTGAGGTATACTTAAAAATAAATATTACCCTAGCACGTACCGAGAGGCAAAGAGGGATGAATTCTTAGAACTAAAACAAGAGACACTTTCAGTGGCTGAGTATGAGAGAAGATATACCGAGTTTTCGCGGTATGTTGATGTGATTGTGGCATCTGAGAGTGACAGGTGTCGAAGATTTGGAAGAGGGTTACGACCTGAGATACGTACCCCAGTTACAGCCATTGCTAAGTGGATTGATTTCTCCCAGCTGGTAGAGACTGCTCTACGTGTTGAGCAGAGTATAGCAGAGGTGCAGTCAGTAGTGAAGCCTAATTGTGAAGGCTTCGACAACAAGCGATTTCAAGGTTGTGAGCAATGAGATTCACACTTGGAGTAAATGTTTCTAAGTCAATATGACTTTAAGGAGCAAGCTAGTAGCCAAGTAGCCAGGCATCGAGGCAGATGATTGTGGGTAGTGCCTATCAGAGGCAGAATTAAAAAGAACCTAATTAGTTTGTTTGATTAGCAGCAAGACTGCAAAGAGGGCAAGAGTCTATTGCCAGTATAGCAAGGAAAACTCCATGTATGATCTGTTGCAAGAATCATCAAGATCATTGTCTTGTGAGTGTTAGTACATGCTACCAGTGCTGACAACCAGGACATGTCAAGAGGGATTGTCCACAGCTATGGACAGCCGCACAGAGGGACTAGGGAGTTGAGTCCCAGACAGTAGAGCAGCCGAGAGTTTCAGTAGCTGCAAGAGAGGGCACCAGTGGTGTTAGACTAAAGAGAGTTGTAGGAAGGCCTAGGCAACACGGAAAGGTCTAGGTTATGACTCAAAGAAGAAGTGAGGATGCACCATATGATTATTGGTACAATTACTATTTGAAATGTACCGCACTGCTTTAATAGAACAATGTGCTACACATTTCTTTGCTTTAGTATGTTCTTTGACTAAGTTGAACAGAAGCTAGAACCTTTATGTAAAAGGTTAGTTATATACACTCCAGCTTGGTGATGCTTTATTAGTCAATTCAAGATGCGGAATTGTGAGGTCTTAGTAAAAGGTCTCAATTTGTTAGTGGATCTTCTTCCACTAGACTTGCAGGTGTGAGATGCAATCTTAAAGATGGATTTCCTATTTACTCATTATGCTTCCAGAGATTGCCATATAAAGGAAGTTGTTTTCAAGAAACCGAGATTAGTGAAGTGGTTTTATGGGATGAAAGAAAGACTATCCCTACGAGTTTGTTTTCTCATTCAAAGCTCGGTTATTGAGGAAAGGTTGCACGACGCTTCTTGCACATGTAGTTGAGGTGCAGGAAGAAAAGCTAAAAAGAAAATGTTCTTGTTGTGAATAAATTTTCTTGTTGTTTTTCTAGCAGATCTATCGTGATTACTACCGATAGGAAGTTGAGTTCACCATTGAATCTGTTACCATGAATAACACCTATTTCGCAAGCGCCGTATAGAATGGCTCCAAGTGAGATCGTGGAGCTAAAGATGCGATTATAAGGACTAGTTGATAAGGGATACATCGGACCTAGTGTATCGCCTTGAGAGCTCCAAAGTTATCTCAGTGAAAAAGAAAGATGGTACCCGTGAGATTATGCATTGATTACGCATAGTTAAACAAAGTCACGATACGTAACAAGTATCCTCTACCCCGTATAGATGACTTGTTTGACCATTCTGAGGAGCATCGGTGTTTTCTAAGATTGATTTGAGATCGAGATATCATCGGGCTAAAGGTCGAGAATCGACATTCCTAAGACATTATTCATAATGAGGAACGAGCATTATAAGTGTTTAGTAATGCCATTCGGTTTAACAATGCACTAGCGGGTTTCATGGGCCCCATGGATAGGTTTTCCACCAAAGATTTGGATCGCTTTATAATAGTATTTATTGAGGATATACTAGTTTACTCGGTTGCTGACAGAAAGCCTACGAGGAACGCATGAGTATTATTCTACAAACACTACGAGATAAACAGTTGTACGCTAAATTCACCAAAGGTGAGTTTTGGTTGAACTAGGTAATGTTTTTGGGGCATGTTGCCTCAGCAAATGGTGTTAGTATGGATCCAAATAAAGTTAAAGTTGTAGTCAACTCGAGAGAGACCAGCTAGTACGACAGAGGTAATGTAGTTTCCTAGGCTTGGCAGATACTCGCAGATGATTTGTTGAGAACTTCTCACGATTAGTATTACCCTTAACAGCTTATAACAAGAAAGAATGCTAAGATTGAATGGTCGATAAGTGTGAACAGAGTTTTTTCGTGGAGCTGAAAAGAGATTAGTTACAAAGACCTATTTTGACACTTCCTATAACGGAAAAGAGTATGTGGTTTATCGTGATACCTCGAGGAAAGATTTAGGTGTGTACCGATGCAAGAAGGAAAAGTAATAACTTATGCGTTAAGGCAATTGAAAAAGCACGAATGTAATTACCCTACCCATGATCTTGAGTTAGCAGCAAGCTTGTTCTAGCATTAAAGATCCGAGACATTACTGCTTGGTGAAAGGTGTCACATTTACACGCATCATAAGAGTCGATGTATATCTTTGATCAAAGGGAGTTGAAAATGAGACAGAGAAGATGGTTAGAATCGATTAAAGATTATGATTGTACCATAAAATACCATCCCGGTAAGGTGAATGTGGTAGCAGATGGCATTGAGCAGAAGTGAAGACTTCCTAAGGACGCCTTGTGTGGTATTCGAGCAACATTTTTAAGTACTCTAAGGGGATTCTAAGGCGCTTGTAACTCAGAGAAATTGAGAGGGTCTTTAGTTTAATTTCGAGATCGCCTTCACTGTAATAGAGATTGTGAGAAGACAATCGAAGAATAGTAACTTGCAAAAGATGTTTGGGAAGTCCAAACAGGGCTCAGAAGCAGAGTTTAAGATGAGATCAGACGGGGCCATAGAAAGGCAAGGAAGACTATGTGTTCCGAATTTTAGTGAGCTTAAAGATGCTATTCTAGAAGAAGCTCACAGCCATTCGGCTATACATGCATCCAGGAAGCACCAAGATGTGTAAAACCATGAATGGGACTTATTGGTGTCCTGGGTTGAAGCGGGAGATAGTTGATTATGTTGATAGATGTTTAATCTGTCAGCAAGTTAAACCAGTTAGACAGAAGCAAAAAGGACTCCTTAACCCATTGCTAGTGTCGGAATGGAAATGGGAGCGTATTACTATGGTTTTCTGTTTAGATTACCACGTACTTCAAATGGACATGATGGTACTTGGGTAATGGTGGATAGACTCACTAAGATAACACGGTTTATACCGATTAAAATCGACGCTCACGCTTGATCATCACTAGCTAAGCTTATACGTCGGCGTAATTGTAAGACAATACAGAGTGCCAAAGTGTCCATAGTATCGATAGAGATTCGAGATTTACTTCTAAGTTTTGGCCTAGTTTACGAAACGTATGGGAACAGAATCAAGTTTAGTACAACATTCCATCCTTAGACAGATGGGCAAATCAGAGAGGACCATCCGCACTCTAGAAGACATGTTGCAAGCATGTGTCTTTCAAGTTAAGGGAAGTTGAGATACACACCTATCACTTATGGAATTTGCTTACAATAACAATTATCGGTCTAGTTTTGACATGGCACCATTTGAAGCTCTAGATAAAAGACCGTGTAGAACGCTCGTATATTGGAATGAATCGAAGAGCGGAAGCTAATCGATCCTGAGTTGGTGCAACTTATGACAAACAATATTAACGTGAATCAGAGAGAATCAAGGTAGCACAAGACCGCCGTAAGAGTTATGTAGATAAGCAACGAAAGGACTTAGAATTCCGTGTTGAGATCAAGTTTTCTTGAAGTTATCTCCATGGAGAGGTGTCCTTCGCTTTTGGTAAGAAAGGTAAACTAAGCCCTAGATATATTGGTCCTTATCAAGTAACGGACAAGTTGGGCCAAAGCGACCTACTGACTAGAATTGCCGCAGAACTATCTTGTGTACATGATGTTTTCCATGTGTCCATGTTGAGAAGTATATTCCAGATCCGACACATGTGCTACAAGCACAACCCGTTGAGTGAAAAAGACATGAGTTACGCAGAGGATGCAGTTCAAATCCTCGGCGAAAAAGAACAAGTTTTAAGAAACAAGACGATCCCACACGTGAAGGTTCGTTGGAGACATCACTGGAGTGGAAGAGGCAACTTTGAGAGTTAGAAGACTAAATGAGGAGGAAGTATCCGATGATTTTCACCTAAGAACTACTAAATTTGAGAGGACGAAATTTCTTAAGGGGAGGTAGGTTGTAAACCCAAGATCTTTCTTTGGAACCTCCTTATTATCAAACAACAAAAGAAAGGAAGAAATGAATGCTTAAAGCTTGGTTTTCCTTGTTTTAAAAAGAAAAGTAATGAAGTGAAAGGCAAAAGGAAAACAAGAAAGGAAAAACATAAACCATTTTGGTTTGGTTTGGTCTAAGAATAATGAAGAAAGAAAATGAAAGGAAAGGTTATAATGTTGTGTTTTGTTAGGAATGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAAAAGGAAAAAAGAAAGAAAGTGGAAGGTGGGCCCCCACCTTGGTTTTTCTTATTAAACAACCAAGAACCTTCAATTTTCTTCTCATTTTCATCAAAGAGGAGCTGAGGGTTCGTGGGAGAAGCTTAAAGGAAGAAGAAGAAGAGGGTTTCAGCTGGAAATTGAAGAAGAGAGGGAGAGAACTCAAGCAAATTAGTAGAACAACAAGGTAATCACTCTGCCATGTTCTGCTATTTGGTTCATCTCGAGCTCCACAGAAAGAGGTAAGAGCTGAAATTTTGTTTCGTGCAAGTTAACTCATATTGGAACAAAATTCGTGAAGGATGCTCGAGCAAATTCGGACCCTAAGCTACTGATTTATGAAGAGGAAGTCAGAACACAGAATTTACTGTCAAATCCGAGAAGTCTCTGATGTTTTGGTTGTACTGACCTGTAGAATTGGAATCCGAAGCTCTATTAGGTATGGTTGGAACGCTTATTGAATTTCCTACAACTTTCGTGAAGAATTCGTGAATAGAAAATGACTGTAAGATGTTGTAATTAGCAGGTCAAGTTTCGGGTTGCAGCAGAAAATCGAATCTGGAATAGCAGAAGTTAGTTCCGGGGAAAGGAGCTTTCGAGGTATTTCTGAACCAATCTATTGGGAATCTCATTTTCATGTCTTCTTAAGAGTTTTAGAGGGTTCAAAAAGGAAGAGTTTGGTATAAAGTACATTATTTTTGGATAAGTAATGAAGAAGTTATGAGTATCTGAATACAGGGCATAAAATCTGTTAAATGCTGGAATTTTTGTTGGAGTGTTTTCTTGTAGTTTAAAGGTTAAAAACCATGAGCTTGAGGTTCTAAAACATGGTTTTGGTTTGTTTGACAGGCCAAGAACAAAAGGTCGAGTGTACGGGTCAAGACTTTAGTTCTAACACTGTGAGTGACAAACGAACCTTGAAAATGGTTTATAGGCTTGTATTATGCTTATGAAATGCAAGGTTTTGCTAAAACGAAATGGTTTAGATGTTTATTGTTTTCTTGAACACTTGTTTATGAGCATTCATGATTTCTTAGAAATGTTTTCAAGTGTTCATGATGAGCCTAAAAGTCTTTATAAAGTTTATACATGAGCATATGTCCAATGGTTGCCAAAACTTATGAAAATGTGATGATTTCAAGCAAGCATGTACTAGCAAGTATGTTTTAAAGATTTCCAGCTTATGAACAAGCTAAGTAAGCTTGAGTTTTATGAAAGAAAAGATAAGTTCTGCATGTTCAAATGTTTTCATGTGATCTTCTAAGATATCGAGCCCGAGGCTATGTAGTACCGCAGTGTACACATAGTCTTATTCTCGTTGTCGACGCTTGAGTGTACTCCGTGACAACAAATACTGCCGTGAGTGGCCGGGCGGGCCCCACTATTTACAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGAATAAACGTTGGTGTATCAAGGCGTGCCTACTACAAACGTAGATCGTGACATGTTTTAAAAAGAGTTTATATCATTTACATGCCTTACGAGATTTTAATCTGTCTTGCTTGTTTTCATGAAAAGCTATAATGTTTAAACGATTACTTTTAACGCTTGATTACGTATGCATATGCTCATAGATGGCGGTGATATGATTTACGAGTTAATAGCTTTCTTTTAAACTCAAGTCACTCAACGAGCTTCATAGCTCATTCTTCCAAAGTTGTTTTTCCCACTTTTCGTGTAGAGATCGAGCTCCTGCAGCTCGAGAACTCGCCATAGTCTGCTGAAGCTTCACATGTTGATATTTTGTACGTGGTCGGTGTGGTTTAGCAAGTCCATATGTCTCAGTAAATTATTTTAAGAGAACTATGTAATTATAGTCGTATGTGCTTTAGAGGTTGTGGTTGCTTAATTAGTGGTTTGGATTGTTTGTGGTTCTCGATGTTCTTGCTCATCTTAGTTTCCAAGAGAGACTTAAGAAGAGTTTCTCCTCATGTACGCCTTATAGATGTCCGGGGCTCACTGAGTTAAGTTAAAAGTGTTCCATATGCGAACATAGTTTGTTTTCGTGTAAAGTAGTGTCGGCAGTATTGTTAAGAGGTAACAATGTCTGCTGGCTTCATGCCGCTCTCCGGGCTAAGTTAGCAAGTGGTTCGGGAGGGGTGTGACAAAGAACGCACTCTGCTTCCATAGTGGAATCGGCGATGCATCCCTCTTGATGCTTCGCCATACTACGCCTCCTCCATTCGAATGAAGGCTTACCCCGCGGGATTTCCTAGAATCCTTATCGGTCCCAAAGTCGAAATTGCGTGTATCCCGTAAGGATCAAATCCTCATTGCCATACACTAAGTTGTAGTTCCTCGTTCTCCTAAGATACTTGAGGATTGCCTTTACAGTTGTCTAGTGATCTAATCCTGGATTGGATTGATATCTACTGACAATCCCTCTTGCATAACGGATGCTCCGGCCTAGTTCACAACATGGCATACATGAGGCTCCCTACAAACAAGCATAAGGTATCCGTCTCATATCCTCAACCTCTTGAGGAGTCTTAGGACACTGATCCTTAGACAGGTGAACTCCATGCCTGAAAGGGAGTAAGCCTTTCTTGGAGTTCTGCATCTTATATCTAGACAATATCTTGTCAATAAAAGACGCTTGAGACATGGCCAGCGTTTGTTCTTCCGGTTCCGGACTATCTGGATACCTAGAACATACTGAGCTTCTCCCAAATCTTTCATTTGGAATTGCGAGCTAGTTATTTCTTTACGTCAGTAAGGAATTCTACCTCATTCCCAATGAGAAGAATATCATCTACGTAAAATATCAGAAATGCGACACTTTTGTCAACGATTTTCTTGTAAATACAAGGCTCGTCAACATTCTGATCAAAGCCATAAGATTTGATTGCCTCATCAAACCTTATATTCCAAGACCTCGAGGCTTGTTTCAGTCCATAAATAGACCTATGAAGCCAGCAAACTTTTTGCTCTTGGTCTTGGGTAATGAACCCTTTGGGCTGGTCCATGTAGATGGTTCCGTCAAGGTTGTCATTCAGAAAGGCGGTCCTGCCATCTATCTGCCATACCTCGTAGTCATAATACGCGACAATGGCTAGAAGGATCCTAATCGACTTTACCATGGCAACAGGTGAAAAGGTTTCCTCATTGTCAACCCCTTCGACCTGGGTAAACCCCTTTGCCACTAGTCGTGCTTTGAAGGTCTACACCTTCCCATCTACGTCACGTTTACGCTTGTAGATCCATTTGCAACCTATAGGTTTTACCCCTTCCGGTTGATCCACAAGCTCCCAGACAGAATTGAAGTACATCGACTCCATTTCCTTGTCCATAGCTTTAATCCATTCGTCCTTGTCAACATCAGCCATAGCCTGTTCATAGGTCAATGGATCCTCGCAGTCATCATCAGGACTGACGACTTGGGTTTCAGCTAAACCCATGTAACGTTCAGGCTATCTCACAACCCTCCCACTACGTCGAGGCATTCCCAACTCTTGGGAACGGATTTGACTTGACGTGCTAGGATCAACAACACTTGTTGACGTACTAGCCCCATTAGCAACTCTTGTTGATGTAATGTCCATTTCATTTAACACGATTTTGCTCCTAGGCAAATGATCCGTAACATGATCTTCCTCAAGGAAAGTGGCGTTTGTCGACACAAGCACCCTATTATCCTTAGGATCGTAAAACAAACCATCTGTGGTCTCTTTTGGGTAACCTACGAATAGGCACAACTTTGAACGGGGTTCCAGCTTCTTCGGGTTTGACATCAAGACATGGGTCGGGCATCTCCAAATTCTGAAATGGTGTAAACTGCCTTTACGGCCATTCCAGAGTTCGAACGGTGTTTCACAAACACTTTTCGACGGAACGTTGTTCAAAATATACACCGCAGTCTCCACTGCGTAACCCCAAAAAGAATCAGGGAGACGAGCATAGCTCATCATCGATCGAACCATGTCCAACAGGGTTCTGTTTCTCCTCTCCGATACACCATTCTGCTGTGGCATACCAGGTGTTGAGAGTTGGGATGTAATTCTGTGTTCTATCATATAGTCTTGGAATTTAGTGTCCATATACTCTCCACCTCGATCCGATCAAAGTGTTTTTATCGTTTTACCTAACAGGTTCTCAACCTCAGTCTTGTATTCCTTGAACTTTTCAAGAGTTTCAGACTTCCTATGCATTAGGTAAATATAACCATACCTCGAATAATCATTAATGAAAGATACGAAGTATTCGTAACCACCTCGTGCTTTAACACTCATCGGACCACAGGGGTCATAATGTATAAGCTCAAGGGGCTCCTTGGCTCTATATCCTTTTCCACTATAGGGACGTTTGGTCATTTTGCCTCCGAGGCATGACTCACACACCGGGGTAAAGAGTTTTCTTCTAACTGACTTAGAAGTCCACTCTTTACTAGTCGCTCAATTCCGATTGAGATTAATGTGGCCTAACCTTAGATGTCAAAGATGGGCATTTTCTTTAAGAGAAACCTTAACTTTCTTAGTTCGCGTTTCTGCAGTTTTAAACAATTCAGTATTCAAAACGCTTTTGACCGAATTTGGCTTTAAAATATATAAGTTAGACTTAAGTGAAGCAGAACAAATAAGATTACCATTTCTGGAAATAAACGCTTTATTACCATTAAATGAAACGGATATACATTGTTCTAATAAGCAAGAAATAGAAACAAGGTTTCTAGTAAACTCTGGAACTATATACATATTGTCCAACAATAAAAAATTCCTGCCAAAATAAAGCTTCACTTTGCCGATCGTTGCATCAGAGACTATCTCCCCGGATCCAACCCGTAGAGTCACCTCACACTCTAGCAATTACCGAGAATCAATTCCTAAAAGAAAAACAAACGTGGTTAGTGGCGCCCAATCTAAAATCCAGCAGAGTCACTACTCTCCACTAAACATGTTTGATGTCAGTAAATCACATTTACCTTGATTCTTCCTCTCGCCAAGGAACTTGGGACAGTTTCTCTTCCAGTGGTCGTCCCCATTTTAGTGGAAACACTTTCCTTTTTCTGCAACTTCCTTGACCTTCTTGCCCTTTTGGGCGGTAGCTCGGTCTGCCTTACCCCTCTTCATCTTCTTCTTCCCTTTCGGGCGTGAAGGAGCAACAAGTTTAGTCCCAGAGGTCGAACCCCTGTGATAGGACCTGTAGGCAACATTTGCCTCAGATTCCGATGCCCTAATCCTCATCAAGGACTGGAAATTCTGTAGCTCATTGAGGAGGGTAGTAAGTGTGTAGCTAATCTTGTTCATAACAGCGTTGCTACGAAACTGAAGGAAACTCTTCGAAATAGTCTCCAGAATAAAGCTAACCTGGCTCGACTCGTCGATCGAAGCCCTGTTCATCTCCGCCAGATTAAAGTGGGTCATCATGTCTAGAACGTGTTCTCGGACAGATGTCCATTCTTTCATCTGGGCGTTGAAGACGTGTTTGAGCGAGTCGTGCCTGACCTGAAAGGACTGTTGTCCAAACATGTCCTACAACGACTCCATGGTCTCCTTAGCGGTGACCATCAACTCATGCTTCTTTGCCAAGACTTCAGACAAGCTGGCAATTATGTAGACCTTGGCCTTTTCATTGGCCCTAATCCATCGATCGTGAGCATCACAAACACTTCGTGATGCAATCGAGGTCGGCAACTGAGGACATTCCTCAGTAAGCACGAACTTCAGGTCGTCAGTTACTAAGATCGTGTTGATATTATTCTTTCAAGTTTGGAAGTTATCTCCCATTAATTTGTCGGAAGCTAACAAAGCTATAACTGAGCTAGACATGTTTTTAGCTAGAAAATCAAATACAATTTTGTGTCAGTTTCGCATAAACTTTTGAAAACCAATCAAGTTTTAGCAAAATTTAATCCTATGATCCCTAGGTCATAAAAAAATTGCAATGATATCCTAAAGGTTTAGAATGACCACCACCGAAGGGTGAACAGAAACACTCCTCCTCTAGGAAGAGAGTTTCTCGACTAGACCCTAATCCCAGAATACATCTTATTCCATTAGGCGTCCAGTTACCCTCAATCTTTAAGTTTCCAAGTATCCGTCCAAACAATAGCCACAGAAGGGTGAACCACGAAGGAAAACCAACAAGGAAACTATATCCCTTTCAGGAATTCACGGTGTTCCGACTCCCATGATCAAGGCCCTCCGAAGGGATTGTCTTGTCCAGGCCAAACTAGCAGGCGAATCATAGGGGTCTCACGGTGTGAATCGAAAGAAGAGACCATGGGTCCCGTTTTCACAGGTCGCACTCCCACTCATTATAAGTACTCTCTCCATCCACTATGATATTGATCCATACAAATACCATTCAAAGGGGGACGCTCCCATTTGCGTCACGAGACCGAGTATGGATATCAGGGTGTGGACTTAACGGAGAGTTGTGGTCGGAAATTAAATGTATCTTATACACTATATTTCCTCCCACTTTGCACTTTATAAATTTTGGGATTGACCTAGATAAACCGACTTAAATTTACCTAAGTCTACCAATATAACTCTTATATGGTATTTAGCCTAAGTTTATAATCACATTATTACTTAGGCCTATGTGAGTAAATTAAAACTCTTTTAATTAACGACACTCACGATAAGTATAATCTAAGAATCTCCGGACCGAATTCACTCCCAAGTCGGTTACTAATCAGGTCACCATTCATAGACTATACTTTCATTTCCTAATTCTAATCTTATTAGAACTAGAAAACCTAAGTCTAATTATTCAAGTTCTAAACACTTTAAAACTAATAATTAACTTTAGTTGCATGCATTTCTATGTTATAGTGCTTGATCATTCATCACATGAATAACTATATACTATAACATAAATTATTTCATCACATGAATATAAATGCATGAGCATACTTTAGTTTAAAAAATATAACACTTATACTAATTAAATTAAAACATGCATTTAATTACATTATAAATCTTATAATATAATCTATCATGCAAACTATATATTATAACTCTTCTAATATAAACGATGCATGAAATGTTTAACCTAAGGTGGGATTTTAAATCAATATGACATACAATATGCACATAGAATTTGATTAAATCCTACATCTCATGCATAAAATAATTAAACAGCAAAAATGGACCTGTTTTGGCACCTAGGGGAAATTATTTAATTAAATAACATTAATATAACAATTATATTAATAATATTTAATAAAATAATTAAATGAACAAATAAAATATATTTTACAAATTAATTTTAAATAAAAAACGTCAAAAAATTGCCCAACTAAGGAACTGCCCACTTTCTTGCAGAAAAGTCTCGCAAACTGCCCACTACCACACGCAGCGTTGCAACGCTGTAGAAGCGCTGCAGCGTCAGTAGCGTTCACCTCACCCAGGCGTCCTCAACGCCAAGGTAGCGTTGTAACGCTGATCGCAACATGCAATACTCCTGCGGGCACAGCGTTGAGATGCCTATGAACAGCGTCTCAACGTCGTCACCTGTACAGCAAACACCTTTGTTGTTTTGCCTCGAATTCTGCCTGTTTCCGCTTCGATTTATTCACAGCAACTCTTACCACGAACTTCTCGGACTTACAGACTCGATTTACAACTAAATGCCCAAAAACAACGGGCCTTTACATTGATCTAATCAACATAAATTGTAAATCTATTCTAGTGCTAAAAACCGAAACATCCATTATGCAAACCAAACATTTATCTCATAAACCAAGGCTTTACCCACCTAATTTTAACGAAAAAATAGTGCACAAACTTCGAACCAACATAAGGCTCTAATACCAATTGAGGGGAATGAGAATCCTCGCACAGCGGAAGACGATGAAATCGTCGTGGTGAAGTTGTGCACTTGAGTTTCATTAAAATGATTTAACTATTAAATCTAGGCTAAACATGCTTGAAACGGGAAGGAAAAATAGTAAGTTATCATTACTAACTTGTTGAAGACCTTCTTCAAGAACTCCTTTCCAGCGAATCACGAACTCTTCGTGCAATCTCGATCTCTACGAATCCGAAAACTTCTCACGAACAAGAACACCACCAAAGGCTTCTCGGTTGTTCTTCTTTTGAAAGAAGAAAAGTGGTGGGACTTTTGTGTTTTGGAGAAGGGAGGAGAGTTGAGAGAGTTGAGAGAGAATGGTTCAAGTGAGAATCCAAAAAATGAGAGATTGCCTTAAGTTCCTTCTTGCAAGAAGGTTTTAAATAGTGAAAATTGATGGAGTTAAAATCTCACATTATTACCAATTTACCACAACTATATGTTATGCAAATCATATTTGCATAACCATATATTATAAGATATCTCATATCTCATATTACAAATCACATTTGCAATAATGTGGATTTATTAAATTGAATCACATTCAATTTAATTTCTCTCAATTAATTTCTCCAATTAGCCTTAATGCAACAATTAGGCTAACCTATAGTTTATTATGAATCTCAATAACATTAAACTATATATTATATCATTCATATCTCATATAAATGACATAAATGCCATTTAAGTGAAATTGAAAACTTCAATTCACACCAAAACATTAACCCTTCTTTTAACCAAAATTGAGCCAATTGAGGGACCTAATGGACCTACAGTGAGAAGCTCCAATGATCCGAGACTAACCTATCAAACTCTTTGACCCAGTTAATCAACCTTCATTAGCTACGGTAACACTCCACTAAAGCCCGTAGCTGCATTCCCGTCAGTGCAGAATATTACGTGTCCACTGATATAACCAATGCCCATGAGTCGACCCTTCACAGGTTGTTCGTAGACACTGTTGAGTCAAATTACCGTTTTACTCCTATGTCTACTTCTTGCTCCTTAAGTCCCCACTACTCCTCTAATGAACCACAACGTTGTTATCATCCGACCATACACAACAACTCTCTCGTGCCAGTGAGAGAGTGGGTGACCGTTGTCCAAGCCCTAGAGACAATACTTAAGGGAACAACCCCTAGTTTCCCTAAAGGCGGGAACGAGTGAATTCCATCTCGCGTAGTTAAGTTCCCAGCTCCTTACTTGGTTTTGTCCCTGAGAAGATAGGCATATTGGGCGAGTAATCGTGACCACCTCACCCAGTACTAGTCAAAGGGCGGACTCCATGCATGTGAGAGTTCGTAACATGCTCAGAATTCAAGCCGAGTCACTAATGGTCATCTATAAAGTTATTAGTTCTTACTGTCAACGGTGTTACATCAGTAGATCTAATAATTCACGGTCCGGTCTTGTACAATCTCATTGCACAGGATTCCCTCACTCGCATGTCAACCACATGAACGAGTCAGATCACCTCGTTTGTATCTTAATACAAATCGGGTCGCATCCACAGTGTATCCAAGATTAGGTCTCCAACCCTATCCATATACTGTAGACCGTTCGGGTCATTTACTCGAACGTGATCCTCCCTGTGTGTCCACTACACACCGTTCAAGTTCTAGTTCTCTCATGAATTCAATGACCCTGGAGCTTAGTTTATTGGTCAAAGTTGTATAAAATGCGAGACACAAAATTATGAAATGAATAACACTTTATTAATTTCAAATAGTAATTTACAAACACGAGATTAGGATAAAAATCACAACAAGATGTAGATGCAAAACCTGGAAAAGGTTGCAACAAATTTTTCTTGTTAGCATAAGAAAAGTTTTCATGATTGCGCAAACCTAGATGATAATGGGTGGGCAGTTGATTTTGTGCTTGATTTCCACGATATCCATAGCCCCTAATTATTCACATATTGAGCTTGCAAAAGATCATGATCCTTACCACCTGCAGACTTATTGGCAGTTGCAACTGCAGTTATGGATTCACTATTTCCTGTACCTGCAAGCTTATTAAGAGCACTAGTCAGAGAAGCCATATGAAACTTTATGAAACTTACATCATCAATCTCGTACATCCCTGCCACAGGTTTCGAACTTGACCGTTCAGAATGCAAATTATAACTTGTGGCAGCCATCTCTTCTAACAAAGTACGATCATCTTCTGCAAATTTGGAAAATATGGGCCCCCCAGCAGCTACATCCAAAAGAGCTTTGTTATTACCAGATAATCCATTATAGAAAAGTTGAATTTGTAACCAGTTTGGATAACCGTGATGTGGGCATTTTCTCAACAGATCTTTATATCGTTCCCATGCTTCGAACATCTATTCTCCATCTTGCTGTCTGAAAGTGTCAACCTCAGTTCATAGCCTCGTAGTTTTGGCAGGTGAAAAATATTTGGCGAAAAACGTCTAAGCTAATTCCTCCCAAGTACTGATGCTACCTATGGGCAAAGGCTCCAACCAAAATTTGGCTTTATCCTGCAGAGAGAAAGGAAAAAGTCGTAGGGAATAACATCAAGAGATACACCATTAATTTTTATCGTGCCACAAATTTCAGTAAAGGATCTGAGATGCAGATTTGGATCCTCAGTGGCATGTTCTCTGAACGCATTTTCCCAAACCATCTGAATGAGACCAGTCTTAATCTCAAAATTATTTGCATTAAGTAGGGCATAGACAATCCCATACTGGTTCCCAGTGAAAGTGGGTTGAAAGTTGTAAACCCGAGATCTCTCCTTGAACTTTCTTAGAAAAAAAAAAAACAAAACAAAATAAAAGAAAAAGGAAATGTTGGATATATTTGGTCTTTTTTGTTTTAAAAAGAAAAGAAAAGAAAAGAAAGGAAAGAAAAGAAAAGGAAAGAAAATGAAAAGAAATAAAGAAAAGGACAATAGGGAAAAAGACAAAAAAAATCTTTCCACCACCTATGTTTATTTAAATCATTTTCTTTCCATTTCCTTCTCATTTTAACAAAAGAAATCTGAGGGTTTCGTGGGGGAAGGATAAATAAAGAGGAAGAAGGTGATTTTTTGGAGCTAGAATTGCAAAAGAGAGGGAGAGAACTCAAGCAAATTAGTATGGCAGCAAGGTAATCATTTTGCCCTGTTCTGATTTCTTGATCATTTCGAGCTCCACAAGAAGAGGTAAGAGTTAAGGTTTAATTTTCCTTAAATTTAACTCACATTTGAACAAAATTCGTTAAGGAAGCTCGAGCAAATTCTGAAGCTAAGTTACTGTTTTGTTAAGGGGAAGGCAGAGGACAGATTTTGCTGTCAAATCTGAGAAGTCTCTGGTTTTTGGGTCGTCCTGATCTGTAGAGATTGAATCAGAAGCTCTAATAGATATGATTGGAAAGCTTATTGAATTTCCTACAACTTTCATGCAGCAATCGTGAGTAGAAAATGGCTGGAAGATGTTTAAAATTGCAGGTCAATGTCGGGTTGCAGCAAGGAAACGAATCTGGAATAGCAGAAGTTTGTTTTTGGGGAAAAAGCTTTCGAGGTATTTTCGAAAAATCCGTTGGGAATCTCAATTTCATTTCTTCATATGATTTTTAGAGGGTTCAAAGAGGAAGAGTTGTGTATAAAGTACATCCTTTTTGGCTAAGTAATGAAGATGTTATGAATGTTTGAACATAGGGTATGGAATCTGTAAAATGCTGGAAAAAATGATAAAGTGGTTTTTGTAATTTTAAGGTTGAAATTCATGAGCTCGAGGTTCTAATACTTGGATTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTGTACGAGACAAGGTTCTAGTTCTAACACTGTGAGTGACAAAACAAACCTCGAAAATGATTTATATGCTTGTATTAAGCCTATGAAAATACATGATTTTGATAGAATGAAATGGTTTCAATGCTTATTATTTTCCTTTGGAACACATATTTATAAGCATTCATGTTTTCCTACAAATGATTTTAAGTGCTCGTTGTGAGCCTAGATGTCCTGATGAATTTATTCGTGAGCATATGTATATTGTTTACCAAAATTTAGAGAAAATGTTATGATTTTAGGCAAGCATGTACTAGCAAGTATGATTTAAAGATTTCCAGTTTTATAAACAAGCTAAGTAAGCTTGAGTTTTACAAAAGGAAAGATAAGTAGGCATGTTTAAGTATTTTATTGTGTTTTTCTTAGACTTGAATAGTAAATGGTTGGGATATTGAGCCCAAGGCTATATCGTACCGTGTCCACACAGGTCATTTTCTGTTGTCGACGTTGAGTGTACTCCGTGACCACAATGCTGTCGTGAGTATTGGGCGGGCCCCACTACGACAAAGACGATGGAAGTGCTGGGTGGGCCCCACTACATCGTAGAGTAAACGTTGGTTGTACTGGGTGTGTCCTACACAACGTAGATTGTCATATGTTTTATAAGTGTTAATATTACTGATATGCCTTACGAGATTTTAACAACATACTTGCTGGTTTTCTGAAAAGCTATTATGATTACACATTTACTTTTAACGTTTGATTACAGATGCATATGCTCATAGATGGTCGGTGATATGATCTACGAGTCAATAGTTCTTTTAAACTCAATCACTCACTGAGCTTCGTAGCTCATTCTTTCAGTGTTTTCCAAATTTTTTAGGTAGAGATCGAGCTCCCAATGCCTGACATCCTGCCATAGTCTACTGGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTGGAGTTGCATAGCAAGTCCATATGTGTTGTAGTTTATAGTCGAGGGGACTATGTATTTATATTGCGTGTGCATTAGAGGTTGTGGTTGTATAAACCATAGTTTGATATGTTTTTGGTTGTGATGCTCTTACCCGTTCTAGTTTCAAGAGAGACTTAAGAAGAGTTTCTCCTTACGTATGTTTAGTAATTGTTTAGTTTCCGTTTTTTTATGTTTAAAGTGTTCCATGTGCAAGTATAGTATGTTTATCGATAAAAACAGGGTCAACAGGTATTGTTAAGAGGTAAACAATGTTTTTTGGCTTCACGCGATCTTCCGGGCTAAGTTAGCAGGTAGTACGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

mRNA sequence

ATGGTTGGAAAGCTTATTGAATTTCCTACAACTTTCGTGAAGAATTCGCCAAGAGGAAATAGGTCGAGTGTACGAGACAAGGTTCTACCCAAGGCTATATCGTACCGTGTCCACACAGGTCATTTTCTGTTGTCGACGTTGAGTGTACTCCGTGACCACAATGCTGTCGTGAGTATTGGGCGGGCCCCACTACGACAAAGACGATGGAATAAACGTTGGTTGTACTGGGTGTGTCCTACACAACGTAGATTGTCATATTCTACTGGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTAAACAATGTTTTTTGGCTTCACGCGATCTTCCGGGCTAAGTTAGCAGGTAGTACGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Coding sequence (CDS)

ATGGTTGGAAAGCTTATTGAATTTCCTACAACTTTCGTGAAGAATTCGCCAAGAGGAAATAGGTCGAGTGTACGAGACAAGGTTCTACCCAAGGCTATATCGTACCGTGTCCACACAGGTCATTTTCTGTTGTCGACGTTGAGTGTACTCCGTGACCACAATGCTGTCGTGAGTATTGGGCGGGCCCCACTACGACAAAGACGATGGAATAAACGTTGGTTGTACTGGGTGTGTCCTACACAACGTAGATTGTCATATTCTACTGGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTAAACAATGTTTTTTGGCTTCACGCGATCTTCCGGGCTAAGTTAGCAGGTAGTACGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Protein sequence

MVGKLIEFPTTFVKNSPRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIGRAPLRQRRWNKRWLYWVCPTQRRLSYSTGSSTSLIFCTWVNNVFWLHAIFRAKLAGSTGGGVTTWYQSS
Homology
[Close]
BLAST of Tan0000016 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 6.9e-12
Identity = 58/160 (36.25%), Postives = 75/160 (46.88%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIGRAPLRQRRWNKRW--- 76
           PRGNR S++ + + K +        F LSTLSVL D++AVVS G+APLRQRRW  R    
Sbjct: 83  PRGNRLSLQTEEIDKTVI-------FPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPT 142

Query: 77  -----------------LYWVCPTQRRLSYSTGSS------------------------- 129
                            +  + PT    S S  S+                         
Sbjct: 143 TSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQ 202

[Close]
BLAST of Tan0000016 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 6.9e-12
Identity = 58/160 (36.25%), Postives = 75/160 (46.88%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIGRAPLRQRRWNKRW--- 76
           PRGNR S++ + + K +        F LSTLSVL D++AVVS G+APLRQRRW  R    
Sbjct: 83  PRGNRLSLQTEEIDKTVI-------FPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPT 142

Query: 77  -----------------LYWVCPTQRRLSYSTGSS------------------------- 129
                            +  + PT    S S  S+                         
Sbjct: 143 TSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQ 202

[Close]
BLAST of Tan0000016 vs. NCBI nr
Match: TYJ96574.1 (uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11
Identity = 58/165 (35.15%), Postives = 78/165 (47.27%), Query Frame = 0 

Query: 1   MVGKLIEFPTTFVKNSPRGNRSSVRDKVLPKAISYRVHTG--------------HFLLST 60
           +V KLI++PTTF+K  P GNR S++   L K +S    T                F LST
Sbjct: 112 IVRKLIQYPTTFMKIVPIGNRLSLQAGELDKTLSIDYMTEILSMRLYGTVCTQIIFPLST 171

Query: 61  LSVLRDHNAVVSIG---------------RAPLRQRRWNKRWLYWVCPTQRRLSYSTGSS 120
           LSVLRD+NA V +                + P+  R W+     ++     RL Y     
Sbjct: 172 LSVLRDNNAFVEMSSWCLIHCQRLLKVSDQTPV--RGWSCISSLFMLKCFVRLFYKPSDV 231

Query: 121 TSLIFCTWV--------NNVFWLHAIFRAKLAGSTGGGVTTWYQS 129
            +  +  W         ++V+WLHA+FRAK  G  GGGVTTWYQS
Sbjct: 232 RAASYVCWKGSAEIVRGDDVYWLHAVFRAKTTGGPGGGVTTWYQS 274

[Close]
BLAST of Tan0000016 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-11
Identity = 59/146 (40.41%), Postives = 69/146 (47.26%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIG------------RAPL 76
           PRGNRSS++   L K +        F LSTLSVLRD++AVVS G            RAPL
Sbjct: 520 PRGNRSSLQTGELDKTV-------RFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPL 579

Query: 77  RQRRWNKRWLYWVCPTQRR------------------------LSYSTGSSTSLIFCTWV 124
             RR +KRWLYW CPT RR                        L  S  SS S      +
Sbjct: 580 -HRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGI 639

[Close]
BLAST of Tan0000016 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-11
Identity = 59/146 (40.41%), Postives = 69/146 (47.26%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIG------------RAPL 76
           PRGNRSS++   L K +        F LSTLSVLRD++AVVS G            RAPL
Sbjct: 106 PRGNRSSLQTGELDKTV-------RFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPL 165

Query: 77  RQRRWNKRWLYWVCPTQRR------------------------LSYSTGSSTSLIFCTWV 124
             RR +KRWLYW CPT RR                        L  S  SS S      +
Sbjct: 166 -HRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGI 225

[Close]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12
Identity = 58/160 (36.25%), Postives = 75/160 (46.88%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIGRAPLRQRRWNKRW--- 76
           PRGNR S++ + + K +        F LSTLSVL D++AVVS G+APLRQRRW  R    
Sbjct: 83  PRGNRLSLQTEEIDKTVI-------FPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPT 142

Query: 77  -----------------LYWVCPTQRRLSYSTGSS------------------------- 129
                            +  + PT    S S  S+                         
Sbjct: 143 TSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQ 202

[Close]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12
Identity = 58/160 (36.25%), Postives = 75/160 (46.88%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIGRAPLRQRRWNKRW--- 76
           PRGNR S++ + + K +        F LSTLSVL D++AVVS G+APLRQRRW  R    
Sbjct: 83  PRGNRLSLQTEEIDKTVI-------FPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPT 142

Query: 77  -----------------LYWVCPTQRRLSYSTGSS------------------------- 129
                            +  + PT    S S  S+                         
Sbjct: 143 TSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQ 202

[Close]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match: A0A5D3BC77 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold791G00040 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11
Identity = 58/165 (35.15%), Postives = 78/165 (47.27%), Query Frame = 0 

Query: 1   MVGKLIEFPTTFVKNSPRGNRSSVRDKVLPKAISYRVHTG--------------HFLLST 60
           +V KLI++PTTF+K  P GNR S++   L K +S    T                F LST
Sbjct: 112 IVRKLIQYPTTFMKIVPIGNRLSLQAGELDKTLSIDYMTEILSMRLYGTVCTQIIFPLST 171

Query: 61  LSVLRDHNAVVSIG---------------RAPLRQRRWNKRWLYWVCPTQRRLSYSTGSS 120
           LSVLRD+NA V +                + P+  R W+     ++     RL Y     
Sbjct: 172 LSVLRDNNAFVEMSSWCLIHCQRLLKVSDQTPV--RGWSCISSLFMLKCFVRLFYKPSDV 231

Query: 121 TSLIFCTWV--------NNVFWLHAIFRAKLAGSTGGGVTTWYQS 129
            +  +  W         ++V+WLHA+FRAK  G  GGGVTTWYQS
Sbjct: 232 RAASYVCWKGSAEIVRGDDVYWLHAVFRAKTTGGPGGGVTTWYQS 274

[Close]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11
Identity = 59/146 (40.41%), Postives = 69/146 (47.26%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIG------------RAPL 76
           PRGNRSS++   L K +        F LSTLSVLRD++AVVS G            RAPL
Sbjct: 520 PRGNRSSLQTGELDKTV-------RFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPL 579

Query: 77  RQRRWNKRWLYWVCPTQRR------------------------LSYSTGSSTSLIFCTWV 124
             RR +KRWLYW CPT RR                        L  S  SS S      +
Sbjct: 580 -HRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGI 639

[Close]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11
Identity = 59/146 (40.41%), Postives = 69/146 (47.26%), Query Frame = 0 

Query: 17  PRGNRSSVRDKVLPKAISYRVHTGHFLLSTLSVLRDHNAVVSIG------------RAPL 76
           PRGNRSS++   L K +        F LSTLSVLRD++AVVS G            RAPL
Sbjct: 106 PRGNRSSLQTGELDKTV-------RFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPL 165

Query: 77  RQRRWNKRWLYWVCPTQRR------------------------LSYSTGSSTSLIFCTWV 124
             RR +KRWLYW CPT RR                        L  S  SS S      +
Sbjct: 166 -HRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSRSAGI 225

The following BLAST results are available for this feature:
BLAST of Tan0000016 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0000016 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037581.16.9e-1236.25reverse transcriptase [Cucumis melo var. makuwa][more]
TYK03091.16.9e-1236.25reverse transcriptase [Cucumis melo var. makuwa][more]
TYJ96574.12.6e-1135.15uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa][more]
KAA0065516.13.4e-1140.41uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa][more]
TYJ98800.13.4e-1140.41uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa][more]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BTP33.3e-1236.25Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M63.3e-1236.25Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5D3BC771.3e-1135.15CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7VGQ51.7e-1140.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BG851.7e-1140.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Tan0000016 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000016.1Tan0000016.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016779 nucleotidyltransferase activity