Tan0000005 (gene) Snake gourd v1

Overview
NameTan0000005
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG05: 23575231 .. 23578696 (+)
RNA-Seq ExpressionTan0000005
SyntenyTan0000005
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGTGGAGAAACTGAGAACGGCACAAGTGGCGACCCGGAATACAATCTTTTACACGAAGTAGAAATGGAAGAAGAAGACGAAGATTACGATGACGAGGGATCCGAAGAGAACGAGGACGATGACGACGACGATGATAAATACATGGTACAGGACGACATGTACGAAACAGATGTCGTATGTTCGTCAGAAGACGTGGAAGAATGCATGGACGATGGATACGTTCCAACTTATGGCCCGCATTTTGACAGCGTACTGGATACGGACTGGTTTGGCTTATCCAACAACTTGAACGATTCTTAGGTAACTCAGTGTTACTTTAAAAGTAATGTTGATGTAGTCGAACCATTTATAGGAGGTCCCTTACACCAATGGGGTGATTACTCAACTGACGATGTCAATATACCCGATGCACAACCCAACACCCAGCCACACAGTTGCACAATAATGGAGAACGGCGATGACATTAACTTGGTGGGCCATGGGTCAGCCAGTTGTACCAGTGTGCCAATCGAACAATGTGGCAGAAGTGGTACAGCAGGTCCATCCGCTCCGGTAAATATCAGACAAACAGGCGATATCGTTCTCCCAGTCGTCGACTGTGAGTTGGTAGTGGGCCAAATATTTTTCTCCAAAAAGAACCTGAAAGTCAAAATCTTTATGACTGCCATGTCCAATAATTTCGAAATAAAGGTACTAAAATCTTCAAAGTTTATCTACGTTGTTCGTTGCACAAACGATAATTGTAACTGGAGACTACGTGCCATACGAATGAAAGGATGCGACATATTTCAGATCTCGAAATACACAAAAGATCATTCGTGTTCCATAGAAATGTTGAACCATGACCATAGGCAAGTCAGTGTCGAAGTTGTTGGTCATTTGATCAAGAACAAGTTTATTGGGGTTGGTCGGCCATACAAGCCTAAACACATTATCGAAGATATTAGGCAGGAGCATGGTATCAACATTAGTTATGGAAATGCTTGGCGTGCGAGGGAGATGGCACACACGTTGGCAAAGGGCACTCCAGAAGAATCTTACGCTGTCATGCATAGATATGGAGAAGGTTTGAAGATTGAAAATCCAGGAACTGTTTTTGAAGTTGAACTAGAAACTGAGTCTATGCACTTCAAATGCGTGTTCATGGTGTTGGGTGCGTGCATAAAGGGGTATGCGAAATGTAATTCAGTAATCATCATCGATGGATCTCATTTGAAGGGGAAATACAAGGGTTGTCTACTAGTAGCGGTTACAATGGACGGGAACCAACAACTGTACCCAGTCGCTTATGGTGTAGTCGACGGAGAAAACAATAGATCATGGACTTGGTTTCTAACGAAATTGAGGAACGCCATTGGTCAACAACAGGATATGGTCGTTGTATTCGATCAACACGTAAGCATCGGCCATGCAGTCAATGTTGTATTCCCCAACGCATTTCACGCATTATGCACGTACCACATAGAACTGAATCTCATCAAACACTTCAAGAACAAAGGTCTTATCAAATTGTTTAACGCGGCGACCCGTGTGCATAGGATATCTGAATTCGAATATTATTGGAATCAAATAAGTGTTATAAACAACGGTGCCGTCGCACGTTACTTGACTGAAATTGGAATAGAACGGTGGGCACGATGTTACCAAAATAATCGCTGGTATGATAATATGACCAGCAATACAGCAGAATGCTTCAATTCATTGACCAAGGATGCACGATTTCTACCCATTACTTCGTTGCTCGAATACATCCGAAACGACCTCCAGCAAAAGTTCCACGATCGCAGAGAGATTTGGAACTCTCACACATTTGCATTTTCAGACTACGTTGGGGAACGGATGACCAAGCAATGCGATATGGACAGACGATTTCTCATTGAACCAATAGACTATTATCGATTTAATTTGAAGGACGGTATGTTTGACGGTATCGTGGATCTGAACATGCGTACATGTACATGCATGGAGTTTCAGTGTTTTGAGATACCATGTGCACACACTATAGCGGCCGCCAGACACCGCAACATAAATCCCCATAGTCTATGTAGCGCAAAATATGGGATCGATGTACTAAGGTCAGTATATGAAGAGTCTATCATTCCGGTTGGACATATTACACAGTGGAAGAGGCGTCTGGATTACAATCAGTTCGTTATACTTCCACCAACAAGAATACCGAGGGTGGGTCGAAGACGAGTGAACAGAATCCCATCTGTCGGTGCACGACGCTTGAATCGAAAATGTGGTAGGTGTGGTAATGCTGGTCACAATCGACAAACATGTAATATGCCCTTGTCCACCAGACAATTCGCTTAAGATTAGTACCGTCTTAATCTTTCATATCATAACACATATATTGTAATATTATATTATAAACATGTTATATATTACATTTGAAGTTTACATGTTTTCTCCGATTTCACTAACTTTATTTCTTTAAAAAACTTAGTAGTTAGTTTTAAATACATGACTGTGGTCCAAACATAGCGACGAGAGCGAGAAGTGCGCAATTAGCGGTTTAAATTGACAGCCTAGACTCTCGGTCAATCAAGGGTAAAAATACATGACATCGAGAGCTATCGAGAGCGGTAGTGTTTGCATCTGAAACGGTGCGACCGAGAGCGCTAGTATTTTGCGTCTGAAACCAAAAAAAACTGCTCGTATATGTATGACAGCGTTAAATGGCGTTGGGTTCGTCTAGTCTTGGCGTTAACGATGGTGTGAGAGCGGTAGTGTTTGGTTTCATCAAAAAACACACGAATATGACTAGATCGAGAGCGGCTGACGACATCAAAAGGTTATCCATCGATAAATTTAAAAATCGGGTCTTCTGTCGATAAAAGAAACGAAAGGAGGTCATCCGTACAAAAACCCCAAAAATGACAATATATAATTAGTATCTTTGTCGCATCGCAATTAACCAAAAGCAACTATCATTATGTATACATCATCAGTACCTAATACTACAACATGAAAGTAACTACGAAGAGAGTACTAATCCTAGTCGATATCAAAGATTGACGTAAGTGTCCAAGATATCGAGTAAAAATGATTCTCAGTTCTCTTATATGTTTTAAGTACCAACCTCTCCATTTTTAATCAACAAAAATAATCGCCCAAAATTAATTAAAATATAAAGAGGTAGAAGCAAATCTATATAACAAATTAAAGATTCAACAACTGCATAACTCGAATTATACCATGACTTTTTGCATAGAAGTGTCACGGGCGTATCAATTTTTACAACATCATTGACATAATTAATATATTCAACTTCCACTCAATTTCATTTCTAATATTCACTTTTTTTTTGTTCAATTAACAAATTAGTACAACTTTCTAGTGTTTAAACAATCACAATCATAATATATGAAATTCTCAAACACATATGTAATTTACTTACATAGGTGCTTTGGAAGAACAAACAGAGGAATTTCTTTTGAAGCCTCTTCAATTGTGA

mRNA sequence

ATGGACTGTGGAGAAACTGAGAACGGCACAAGTGGCGACCCGGAATACAATCTTTTACACGAAGTAGAAATGGAAGAAGAAGACGAAGATTACGATGACGAGGGATCCGAAGAGAACGAGGACGATGACGACGACGATGATAAATACATGGTACAGGACGACATGTACGAAACAGATGTCGTATGTTCGTCAGAAGACGTGGAAGAATGCATGGACGATGGATACGTTCCAACTTATGGCCCGCATTTTGACAGCGTACTGGATACGGACTGTAATGTTGATGTAGTCGAACCATTTATAGGAGGTCCCTTACACCAATGGGGTGATTACTCAACTGACGATGTCAATATACCCGATGCACAACCCAACACCCAGCCACACAGTTGCACAATAATGGAGAACGGCGATGACATTAACTTGGTGGGCCATGGGTCAGCCAGTTGTACCAGTGTGCCAATCGAACAATGTGGCAGAAGTGGTACAGCAGGTCCATCCGCTCCGGTAAATATCAGACAAACAGGCGATATCGTTCTCCCAGTCGTCGACTGTGCTTTGGAAGAACAAACAGAGGAATTTCTTTTGAAGCCTCTTCAATTGTGA

Coding sequence (CDS)

ATGGACTGTGGAGAAACTGAGAACGGCACAAGTGGCGACCCGGAATACAATCTTTTACACGAAGTAGAAATGGAAGAAGAAGACGAAGATTACGATGACGAGGGATCCGAAGAGAACGAGGACGATGACGACGACGATGATAAATACATGGTACAGGACGACATGTACGAAACAGATGTCGTATGTTCGTCAGAAGACGTGGAAGAATGCATGGACGATGGATACGTTCCAACTTATGGCCCGCATTTTGACAGCGTACTGGATACGGACTGTAATGTTGATGTAGTCGAACCATTTATAGGAGGTCCCTTACACCAATGGGGTGATTACTCAACTGACGATGTCAATATACCCGATGCACAACCCAACACCCAGCCACACAGTTGCACAATAATGGAGAACGGCGATGACATTAACTTGGTGGGCCATGGGTCAGCCAGTTGTACCAGTGTGCCAATCGAACAATGTGGCAGAAGTGGTACAGCAGGTCCATCCGCTCCGGTAAATATCAGACAAACAGGCGATATCGTTCTCCCAGTCGTCGACTGTGCTTTGGAAGAACAAACAGAGGAATTTCTTTTGAAGCCTCTTCAATTGTGA

Protein sequence

MDCGETENGTSGDPEYNLLHEVEMEEEDEDYDDEGSEENEDDDDDDDKYMVQDDMYETDVVCSSEDVEECMDDGYVPTYGPHFDSVLDTDCNVDVVEPFIGGPLHQWGDYSTDDVNIPDAQPNTQPHSCTIMENGDDINLVGHGSASCTSVPIEQCGRSGTAGPSAPVNIRQTGDIVLPVVDCALEEQTEEFLLKPLQL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0000005.1Tan0000005.1mRNA