Tan0000003 (gene) Snake gourd v1

Overview


Name	Tan0000003
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	VQ motif-containing protein 4-like
Location	LG01: 100498752 .. 100499673 (+)
RNA-Seq Expression	Tan0000003
Synteny	Tan0000003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATTGGTACCGTTATAAAAATCATCCACAGAGCTCGAAGAATAACTTCCAAAAGCTCAAAAGCACTCACTCACTTTTCTCTCTTCGCACCCACTCTACTCTCTCTCTCCATAATGGAAAAACATCTAATCACCGTCTCATCGCCGCCGCCGCCAACTTCTCCGACCACCTTCGTCCAAGCCGACACCAATTCCTTCAGAGACCTCGTCCAGAAGCTCACCGGCTTTTCCGGTGACTCCGAAAAGCTTCCGGTCACCCACCTCTCTAAGCTTTCCTCCTCCAAGCCCTTCCCTTCCGTCGCCGACCACCTTACCGGACCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATCCAAAAGCTGGAGATCAAACTCGGCCTCACCGGACCTTTCAAAAACTCGCCGCCGAGTCTTAATTCGCCGTGTCACACTTACCGGTTGGATTCGCCCGTTCAGAGTCCTGTTACGCCTCTCGCCACCGAGTCGCTGTTTTTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCACCGCCGGTCACGGCGGAGGATAAGGCTATAGCAGATGGAGGGTTTTATCTTCACCCGTCGCCGATTAATACTCCGAGGAATTCTCAGCCACCGGAGCTCTTGAATTTGTTCCCTTCCAATTCGCCAACGGATCAATCTCAAAATGCATAAAAGGACAAAAATGGAAATTAGTTTTGTTTTTTGGGGAGTAATGTCTCTCTCTCTATATTTTTTATTTTCGTGCTATTTTTTAATTTCAAGCATTCTGAAGCTGGTCCATTGGAGTTATTGAATTTTATTTAGTTCCATTACTATGGTCAATTTCTGCATTCATGTTTTTATTTCCCCTTTTCCCTTTTTTAAAAAAACAACTATATATCATTGGAAAAAAAATCAATTTTCTGGATTG

mRNA sequence

GTGATTGGTACCGTTATAAAAATCATCCACAGAGCTCGAAGAATAACTTCCAAAAGCTCAAAAGCACTCACTCACTTTTCTCTCTTCGCACCCACTCTACTCTCTCTCTCCATAATGGAAAAACATCTAATCACCGTCTCATCGCCGCCGCCGCCAACTTCTCCGACCACCTTCGTCCAAGCCGACACCAATTCCTTCAGAGACCTCGTCCAGAAGCTCACCGGCTTTTCCGGTGACTCCGAAAAGCTTCCGGTCACCCACCTCTCTAAGCTTTCCTCCTCCAAGCCCTTCCCTTCCGTCGCCGACCACCTTACCGGACCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATCCAAAAGCTGGAGATCAAACTCGGCCTCACCGGACCTTTCAAAAACTCGCCGCCGAGTCTTAATTCGCCGTGTCACACTTACCGGTTGGATTCGCCCGTTCAGAGTCCTGTTACGCCTCTCGCCACCGAGTCGCTGTTTTTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCACCGCCGGTCACGGCGGAGGATAAGGCTATAGCAGATGGAGGGTTTTATCTTCACCCGTCGCCGATTAATACTCCGAGGAATTCTCAGCCACCGGAGCTCTTGAATTTGTTCCCTTCCAATTCGCCAACGGATCAATCTCAAAATGCATAAAAGGACAAAAATGGAAATTAGTTTTGTTTTTTGGGGAGTAATGTCTCTCTCTCTATATTTTTTATTTTCGTGCTATTTTTTAATTTCAAGCATTCTGAAGCTGGTCCATTGGAGTTATTGAATTTTATTTAGTTCCATTACTATGGTCAATTTCTGCATTCATGTTTTTATTTCCCCTTTTCCCTTTTTTAAAAAAACAACTATATATCATTGGAAAAAAAATCAATTTTCTGGATTG

Coding sequence (CDS)

ATGGAAAAACATCTAATCACCGTCTCATCGCCGCCGCCGCCAACTTCTCCGACCACCTTCGTCCAAGCCGACACCAATTCCTTCAGAGACCTCGTCCAGAAGCTCACCGGCTTTTCCGGTGACTCCGAAAAGCTTCCGGTCACCCACCTCTCTAAGCTTTCCTCCTCCAAGCCCTTCCCTTCCGTCGCCGACCACCTTACCGGACCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACCATCCAAAAGCTGGAGATCAAACTCGGCCTCACCGGACCTTTCAAAAACTCGCCGCCGAGTCTTAATTCGCCGTGTCACACTTACCGGTTGGATTCGCCCGTTCAGAGTCCTGTTACGCCTCTCGCCACCGAGTCGCTGTTTTTTCTGAGGCCCGGCGTGGCCTCGCCGCTGTCACCGCCGGTCACGGCGGAGGATAAGGCTATAGCAGATGGAGGGTTTTATCTTCACCCGTCGCCGATTAATACTCCGAGGAATTCTCAGCCACCGGAGCTCTTGAATTTGTTCCCTTCCAATTCGCCAACGGATCAATCTCAAAATGCATAA

Protein sequence

MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFPSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPSNSPTDQSQNA

Homology

[Close]

BLAST of Tan0000003 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-15
Identity = 76/201 (37.81%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 3   KHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSKLSSSK 62
           +H+ T S    P  PTTFVQADT+SF+ +VQ LTG +     G S K   TH      S 
Sbjct: 43  RHVTTRSESGNP-YPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRST 102

Query: 63  PFP-SVADHLTGPRR-------SPFKLQERRHTIQKLEIK------LGLTGPFKNSPPSL 122
           P   S+      P +       S F+L ERR++++ L+I         +   F    P +
Sbjct: 103 PSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEI 162

Query: 123 NSPCHTYRLDSP--VQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSP 182
            SP     LD P  V SPVTPL  +   F R G ++     + AE+KA+ + GFYLHPSP
Sbjct: 163 LSPS---ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLHPSP 222

[Close]

BLAST of Tan0000003 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-15
Identity = 81/207 (39.13%), Postives = 102/207 (49.28%), Query Frame = 0


Query: 17  PTTFVQADTNSFRDLVQKLTGFSGDS-------EKLPVTHLSKLSSSKPFPSVADHLTGP 76
           PTTFVQADT++F+ +VQ LTG S D+          PV + +K  SS   P +       
Sbjct: 48  PTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNK-GSSFSIPPI------K 107

Query: 77  RRSPFKLQERRHT-----------IQKLEI----KLGLTG-----------PFKNSPPSL 136
           + + FKL ERR             I  L +    +L  TG             +NS  S 
Sbjct: 108 KTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSE 167

Query: 137 NSPCHTYRLDSP---VQSPVTPLATESLFFLRPGVASPLS-PPVTAEDKAIADGGFYLHP 187
           N       LD P   + SPVTPL +    F +   +SPLS    + EDKAIAD GFYLHP
Sbjct: 168 NILLSPSMLDFPKLGLNSPVTPLRSNDDPFNK---SSPLSLGNSSEEDKAIADKGFYLHP 227

[Close]

BLAST of Tan0000003 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.3e-13
Identity = 76/204 (37.25%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSG----DSEKLPVTHLSKLSSS 60
           +  H+IT S       PTTFVQAD++SF+ +VQ LTG S     DS + P T   K +  
Sbjct: 24  LHHHIITRSD----HYPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFV 83

Query: 61  KPFPSVADHLTGPRRSPFKLQERRH------------TIQKLEIKLGLTGPFKNSPPS-- 120
            P    A      + S  KL ERR              I  L I  G  G  + SP +  
Sbjct: 84  IPPIKTAQ---PKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQE 143

Query: 121 -LNSPCHTYRLDSP---VQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLH 180
            L+  C    LD P   + SPVTPL   +      G       P++ E++ IAD G+YLH
Sbjct: 144 ILSPSC----LDFPKLALNSPVTPLKQGTNG--NEGDPFDKMSPLSEEERGIADKGYYLH 203

Query: 181 PSPINTPRNSQPPELLNLFPSNSP 183
            SPI+TPR+S+ P+LL LFP  SP
Sbjct: 204 RSPISTPRDSE-PQLLPLFPVTSP 213

[Close]

BLAST of Tan0000003 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-11
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 0


Query: 18  TTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFPSVADHLTGPRRSPFKLQ 77
           TTFVQ DTN+FR++VQ+LTG + ++        + + ++             +R   KL 
Sbjct: 17  TTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAI-----------QKRPTSKLH 76

Query: 78  ERRHTIQ-KLEI-KLGLTGPFKNSPPSLNSPCHTYRLDSPVQSPVTPLATESLFFLRPGV 137
           ERR  ++ KLEI K  L+     + PS  S  +T  L SPV +P +  +  SL     G 
Sbjct: 77  ERRQCMRPKLEIVKPPLSFKPTGTTPSSKSG-NTNLLTSPVGTPSSLFSNLSLI---EGE 136

Query: 138 ASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPSNSPTDQSQ 188
               +  +  E+KAI +  FYLHPSP + P  ++ PELL LFP  SP    +
Sbjct: 137 PDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTE-PELLTLFPLTSPNSSGK 172

[Close]

BLAST of Tan0000003 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 0


Query: 18  TTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFPSVADHLTGPRRSPFKLQ 77
           TTF++ D +SF+ +VQ LTG   +    P        S  P  +V +     + S F+L 
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNK---KQSSSFRLS 95

Query: 78  ERRHTIQK-LEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSPVTPLATESLFFLRPGVA 137
           ERR++++  L I      P  + PP + +P       +   SP TPL ++   F RPG  
Sbjct: 96  ERRNSMKHYLNI-----NPTHSGPPEILTPT-ILNFPALDLSPDTPLMSDP--FYRPGSF 155

Query: 138 SPL---SPPVTAED--KAIADGGFYLHPSPINTPRNSQPPELLNLFP 179
           S     S P   +D  ++I + GFYL PSP  TPR+++ P LL+LFP
Sbjct: 156 SQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTE-PRLLSLFP 190

[Close]

BLAST of Tan0000003 vs. NCBI nr
Match: XP_022138667.1 (VQ motif-containing protein 4-like [Momordica charantia])

HSP 1 Score: 311.6 bits (797), Expect = 4.6e-81
Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MEKHLITVSSPPPP------TSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS 60
           ME+H+  ++ PPPP      TSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS
Sbjct: 1   MEQHVNPMTLPPPPSPPPWLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS 60

Query: 61  SSKPFPSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDS 120
            SKP P  ADHLTGPRRSPFKLQERRHT++KLEIKLGLT  F+NSPPS  SP    R DS
Sbjct: 61  CSKPSPPAADHLTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDS 120

Query: 121 PVQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELL 180
           PV SPVTPLATESL FLRPGVASPLSPPVTAEDKAIADGGFYLHPSP++TPRN QPPELL
Sbjct: 121 PVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELL 180

Query: 181 NLFPSNSPTDQSQNA 190
           NLFPSNSP++QSQNA
Sbjct: 181 NLFPSNSPSEQSQNA 195

[Close]

BLAST of Tan0000003 vs. NCBI nr
Match: XP_038899085.1 (VQ motif-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-75
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPF- 60
           MEKHLI  SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPF 
Sbjct: 1   MEKHLIAASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  PSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
           PS  D+LTGPRRSPFKLQERRHTI+KLEI LG TGPFKN PPSL SP  T R+DSPV SP
Sbjct: 61  PSATDYLTGPRRSPFKLQERRHTIRKLEINLGFTGPFKNLPPSLKSPNPTRRVDSPVPSP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA +SLFF +P +ASPLSPPVTAEDKAIADGGFYLHPS    PR+SQPPELLNLFP+
Sbjct: 121 VTPLAADSLFFRKPSMASPLSPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFPT 176

[Close]

BLAST of Tan0000003 vs. NCBI nr
Match: XP_008452821.1 (PREDICTED: VQ motif-containing protein 31-like [Cucumis melo] >KAA0064567.1 VQ motif-containing protein 31-like [Cucumis melo var. makuwa] >TYK20023.1 VQ motif-containing protein 31-like [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFP 60
           MEKH I  SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPFP
Sbjct: 1   MEKHFIAASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  SV-ADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
            + AD+ TGPRRSPFKLQERRHTI+KLEIKL LTGPFKNS     SP HT R+DSPV SP
Sbjct: 61  PLAADYHTGPRRSPFKLQERRHTIRKLEIKLSLTGPFKNS-----SPSHTRRVDSPVPSP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP VASPL+PPVTAEDKAIADG FYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of Tan0000003 vs. NCBI nr
Match: XP_004145579.1 (VQ motif-containing protein 11 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 147/183 (80.33%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPF- 60
           ME+H+IT SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPF 
Sbjct: 1   MERHVITASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  PSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
           P  AD+ TGPRRSPFKLQERRHTI+KLEI+L LT PFKNS     SP HT R+DSPV  P
Sbjct: 61  PPAADYHTGPRRSPFKLQERRHTIRKLEIQLALTRPFKNS-----SPSHTRRVDSPVPGP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP V SPLSPPVTAEDKAIAD GFYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVTSPLSPPVTAEDKAIADSGFYLHPS----PRSSQPPELLNLFPS 174

Query: 181 NSP 183
             P
Sbjct: 181 KFP 174

[Close]

BLAST of Tan0000003 vs. NCBI nr
Match: KAE8649934.1 (hypothetical protein Csa_012580 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 2.5e-71
Identity = 147/189 (77.78%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPF- 60
           ME+H+IT SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPF 
Sbjct: 1   MERHVITASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  PSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
           P  AD+ TGPRRSPFKLQERRHTI+KLEI+L LT PFKNS     SP HT R+DSPV  P
Sbjct: 61  PPAADYHTGPRRSPFKLQERRHTIRKLEIQLALTRPFKNS-----SPSHTRRVDSPVPGP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP V SPLSPPVTAEDKAIAD GFYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVTSPLSPPVTAEDKAIADSGFYLHPS----PRSSQPPELLNLFPS 180

Query: 181 NSPTDQSQN 189
             P  ++ +
Sbjct: 181 KFPNAKTNS 180

[Close]

BLAST of Tan0000003 vs. ExPASy TrEMBL
Match: A0A6J1CBS5 (VQ motif-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC111009767 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81
Identity = 159/195 (81.54%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MEKHLITVSSPPPP------TSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS 60
           ME+H+  ++ PPPP      TSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS
Sbjct: 1   MEQHVNPMTLPPPPSPPPWLTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLS 60

Query: 61  SSKPFPSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDS 120
            SKP P  ADHLTGPRRSPFKLQERRHT++KLEIKLGLT  F+NSPPS  SP    R DS
Sbjct: 61  CSKPSPPAADHLTGPRRSPFKLQERRHTMRKLEIKLGLTTNFRNSPPSHYSPSQIRRFDS 120

Query: 121 PVQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELL 180
           PV SPVTPLATESL FLRPGVASPLSPPVTAEDKAIADGGFYLHPSP++TPRN QPPELL
Sbjct: 121 PVPSPVTPLATESLLFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPVSTPRNFQPPELL 180

Query: 181 NLFPSNSPTDQSQNA 190
           NLFPSNSP++QSQNA
Sbjct: 181 NLFPSNSPSEQSQNA 195

[Close]

BLAST of Tan0000003 vs. ExPASy TrEMBL
Match: A0A5A7VC76 (VQ motif-containing protein 31-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001410 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.0e-73
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFP 60
           MEKH I  SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPFP
Sbjct: 1   MEKHFIAASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  SV-ADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
            + AD+ TGPRRSPFKLQERRHTI+KLEIKL LTGPFKNS     SP HT R+DSPV SP
Sbjct: 61  PLAADYHTGPRRSPFKLQERRHTIRKLEIKLSLTGPFKNS-----SPSHTRRVDSPVPSP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP VASPL+PPVTAEDKAIADG FYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of Tan0000003 vs. ExPASy TrEMBL
Match: A0A1S3BVZ0 (VQ motif-containing protein 31-like OS=Cucumis melo OX=3656 GN=LOC103493731 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.0e-73
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFP 60
           MEKH I  SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPFP
Sbjct: 1   MEKHFIAASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  SV-ADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
            + AD+ TGPRRSPFKLQERRHTI+KLEIKL LTGPFKNS     SP HT R+DSPV SP
Sbjct: 61  PLAADYHTGPRRSPFKLQERRHTIRKLEIKLSLTGPFKNS-----SPSHTRRVDSPVPSP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP VASPL+PPVTAEDKAIADG FYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVASPLTPPVTAEDKAIADGEFYLHPS----PRSSQPPELLNLFPS 171

[Close]

BLAST of Tan0000003 vs. ExPASy TrEMBL
Match: A0A0A0L104 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G651800 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.4e-72
Identity = 147/183 (80.33%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPF- 60
           ME+H+IT SSPPP TSPTTFVQADTNSFRDLVQKLTGF+GDSEKLPVTHLSKLSSSKPF 
Sbjct: 1   MERHVITASSPPPSTSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSSKPFP 60

Query: 61  PSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPVQSP 120
           P  AD+ TGPRRSPFKLQERRHTI+KLEI+L LT PFKNS     SP HT R+DSPV  P
Sbjct: 61  PPAADYHTGPRRSPFKLQERRHTIRKLEIQLALTRPFKNS-----SPSHTRRVDSPVPGP 120

Query: 121 VTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPS 180
           VTPLA ESLFF RP V SPLSPPVTAEDKAIAD GFYLHPS    PR+SQPPELLNLFPS
Sbjct: 121 VTPLAAESLFFRRPSVTSPLSPPVTAEDKAIADSGFYLHPS----PRSSQPPELLNLFPS 174

Query: 181 NSP 183
             P
Sbjct: 181 KFP 174

[Close]

BLAST of Tan0000003 vs. ExPASy TrEMBL
Match: A0A6J1IP36 (VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477285 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 144/183 (78.69%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 1   MEKHLITVSSPPPP----TSPTTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSS 60
           MEKHL TVSSPPPP    TSPTTFVQAD NSFRDLVQKLTGFSG SEKLPVTHLSKLSSS
Sbjct: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSS 60

Query: 61  KPFPSVADHLTGPRRSPFKLQERRHTIQKLEIKLGLTGPFKNSPPSLNSPCHTYRLDSPV 120
            P P   DH TGPRRSPFKLQERRHTI+KLEIKLG TG FK      NSP H  R DSP+
Sbjct: 61  NPLPPATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFK------NSPSHPRRFDSPI 120

Query: 121 QSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNL 180
            SPVTPLA E LF  +PGVASPL+PPVTAEDKAIADGGFYLHPS    PR+SQPPELLNL
Sbjct: 121 PSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNL 173

[Close]

BLAST of Tan0000003 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 76/201 (37.81%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 3   KHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSKLSSSK 62
           +H+ T S    P  PTTFVQADT+SF+ +VQ LTG +     G S K   TH      S 
Sbjct: 43  RHVTTRSESGNP-YPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRST 102

Query: 63  PFP-SVADHLTGPRR-------SPFKLQERRHTIQKLEIK------LGLTGPFKNSPPSL 122
           P   S+      P +       S F+L ERR++++ L+I         +   F    P +
Sbjct: 103 PSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEI 162

Query: 123 NSPCHTYRLDSP--VQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSP 182
            SP     LD P  V SPVTPL  +   F R G ++     + AE+KA+ + GFYLHPSP
Sbjct: 163 LSPS---ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLHPSP 222

[Close]

BLAST of Tan0000003 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 76/201 (37.81%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 3   KHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFS-----GDSEKLPVTHLSKLSSSK 62
           +H+ T S    P  PTTFVQADT+SF+ +VQ LTG +     G S K   TH      S 
Sbjct: 43  RHVTTRSESGNP-YPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRST 102

Query: 63  PFP-SVADHLTGPRR-------SPFKLQERRHTIQKLEIK------LGLTGPFKNSPPSL 122
           P   S+      P +       S F+L ERR++++ L+I         +   F    P +
Sbjct: 103 PSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEI 162

Query: 123 NSPCHTYRLDSP--VQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLHPSP 182
            SP     LD P  V SPVTPL  +   F R G ++     + AE+KA+ + GFYLHPSP
Sbjct: 163 LSPS---ILDFPSLVLSPVTPLIPDP--FDRSGSSNQSPNELAAEEKAMKERGFYLHPSP 222

[Close]

BLAST of Tan0000003 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-16
Identity = 81/207 (39.13%), Postives = 102/207 (49.28%), Query Frame = 0


Query: 17  PTTFVQADTNSFRDLVQKLTGFSGDS-------EKLPVTHLSKLSSSKPFPSVADHLTGP 76
           PTTFVQADT++F+ +VQ LTG S D+          PV + +K  SS   P +       
Sbjct: 48  PTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNK-GSSFSIPPI------K 107

Query: 77  RRSPFKLQERRHT-----------IQKLEI----KLGLTG-----------PFKNSPPSL 136
           + + FKL ERR             I  L +    +L  TG             +NS  S 
Sbjct: 108 KTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSE 167

Query: 137 NSPCHTYRLDSP---VQSPVTPLATESLFFLRPGVASPLS-PPVTAEDKAIADGGFYLHP 187
           N       LD P   + SPVTPL +    F +   +SPLS    + EDKAIAD GFYLHP
Sbjct: 168 NILLSPSMLDFPKLGLNSPVTPLRSNDDPFNK---SSPLSLGNSSEEDKAIADKGFYLHP 227

[Close]

BLAST of Tan0000003 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-14
Identity = 76/204 (37.25%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 1   MEKHLITVSSPPPPTSPTTFVQADTNSFRDLVQKLTGFSG----DSEKLPVTHLSKLSSS 60
           +  H+IT S       PTTFVQAD++SF+ +VQ LTG S     DS + P T   K +  
Sbjct: 24  LHHHIITRSD----HYPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFV 83

Query: 61  KPFPSVADHLTGPRRSPFKLQERRH------------TIQKLEIKLGLTGPFKNSPPS-- 120
            P    A      + S  KL ERR              I  L I  G  G  + SP +  
Sbjct: 84  IPPIKTAQ---PKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQE 143

Query: 121 -LNSPCHTYRLDSP---VQSPVTPLATESLFFLRPGVASPLSPPVTAEDKAIADGGFYLH 180
            L+  C    LD P   + SPVTPL   +      G       P++ E++ IAD G+YLH
Sbjct: 144 ILSPSC----LDFPKLALNSPVTPLKQGTNG--NEGDPFDKMSPLSEEERGIADKGYYLH 203

Query: 181 PSPINTPRNSQPPELLNLFPSNSP 183
            SPI+TPR+S+ P+LL LFP  SP
Sbjct: 204 RSPISTPRDSE-PQLLPLFPVTSP 213

[Close]

BLAST of Tan0000003 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-12
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 0


Query: 18  TTFVQADTNSFRDLVQKLTGFSGDSEKLPVTHLSKLSSSKPFPSVADHLTGPRRSPFKLQ 77
           TTFVQ DTN+FR++VQ+LTG + ++        + + ++             +R   KL 
Sbjct: 17  TTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAI-----------QKRPTSKLH 76

Query: 78  ERRHTIQ-KLEI-KLGLTGPFKNSPPSLNSPCHTYRLDSPVQSPVTPLATESLFFLRPGV 137
           ERR  ++ KLEI K  L+     + PS  S  +T  L SPV +P +  +  SL     G 
Sbjct: 77  ERRQCMRPKLEIVKPPLSFKPTGTTPSSKSG-NTNLLTSPVGTPSSLFSNLSLI---EGE 136

Query: 138 ASPLSPPVTAEDKAIADGGFYLHPSPINTPRNSQPPELLNLFPSNSPTDQSQ 188
               +  +  E+KAI +  FYLHPSP + P  ++ PELL LFP  SP    +
Sbjct: 137 PDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTE-PELLTLFPLTSPNSSGK 172

The following BLAST results are available for this feature:

BLAST of Tan0000003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M750	2.7e-15	37.81	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9FHZ3	4.6e-15	39.13	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q9LDZ1	7.3e-13	37.25	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FNP0	4.0e-11	34.88	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
O23660	1.2e-10	34.13	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]

BLAST of Tan0000003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138667.1	4.6e-81	81.54	VQ motif-containing protein 4-like [Momordica charantia]	[more]
XP_038899085.1	1.3e-75	83.33	VQ motif-containing protein 4-like [Benincasa hispida]	[more]
XP_008452821.1	1.0e-72	82.78	PREDICTED: VQ motif-containing protein 31-like [Cucumis melo] >KAA0064567.1 VQ m...	[more]
XP_004145579.1	1.9e-71	80.33	VQ motif-containing protein 11 [Cucumis sativus]	[more]
KAE8649934.1	2.5e-71	77.78	hypothetical protein Csa_012580 [Cucumis sativus]	[more]

BLAST of Tan0000003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS5	2.2e-81	81.54	VQ motif-containing protein 4-like OS=Momordica charantia OX=3673 GN=LOC11100976...	[more]
A0A5A7VC76	5.0e-73	82.78	VQ motif-containing protein 31-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BVZ0	5.0e-73	82.78	VQ motif-containing protein 31-like OS=Cucumis melo OX=3656 GN=LOC103493731 PE=4...	[more]
A0A0A0L104	9.4e-72	80.33	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G651800 PE=4 SV=...	[more]
A0A6J1IP36	2.6e-69	78.69	VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477285 ...	[more]

BLAST of Tan0000003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28280.1	1.9e-16	37.81	VQ motif-containing protein	[more]
AT1G28280.2	1.9e-16	37.81	VQ motif-containing protein	[more]
AT5G53830.1	3.2e-16	39.13	VQ motif-containing protein	[more]
AT3G15300.1	5.2e-14	37.25	VQ motif-containing protein	[more]
AT5G08480.2	2.8e-12	34.88	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 15..40 e-value: 4.0E-11 score: 42.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..73
None	No IPR available	PANTHER	PTHR33402:SF3	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 9..185
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 9..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000003.1	Tan0000003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus