Spg040054 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg040054
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor bHLH52
Location	scaffold10: 24286369 .. 24287256 (-)
RNA-Seq Expression	Spg040054
Synteny	Spg040054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCTCACCTTTTACTCCAATTTTTACTCTGACCCTTCTTCAATCACTCACCAATTCCAGTATTTCTCCCCTGAATTCTCGCCGGAGCTCTTCTTTCTCCCTCCGCCGCATCTCGTCCCCGACCCCGCCTTCGATTATGTCCCTGCCGTGGTTGATGACTCCGATTCTTTCCCGACCGCCGCTCCGTTCTTCGACGACACCTTGTCGTTTCTTTTTTCCGATGTCTACCCGTACTTCTCCGCTCCGGTCGCCGATGAATTCGTTCCCGTCTCGGCCGAATTCTTCCCTTCTGATGAATTTGAGTTTCATTGCCCCAAACGACAGAGGGTTGTGTTGGAGCAGAGTTTTTGTTGCGGCGGTGTCGACGGCAATGTCGGTGGCGGAGAAGGCTACTTTCCTCCACCGGAGTTGTTTTTGGATCCTTGGAATGGTGGAATGGACAATGCTGAAATGATCAACGATGGTGGTTGCTTGAAGACTAAACCGTCGCCGTCATCGAGTAACAACTTGTCGGTGCAGACGATTGCAGCCCGGGAACGGCGGAGGAAGATCACGGCGAAGACGCAGGAGCTCGGAGAGCTGGTTCCGGGCGGTAGCAAGATGAACACTGCTGAAATGCTGAATTCTGCTTTCAAATATGTCAAATTCTTGCAAGCCCAAGTCGCCATTTTGCAACTCAAGCAAGAAACAGAGCAAGAGCAAGAAGAAGAAATAGAGGATCTTCAGATTCTCGAATCCACAGTGATTCAAGAGAAATTGTACTCAGAAGAAAAATGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTTCCAATCTCCCTGAGATTCAATCCGATCCGTCCATTTTCAACTCCATCAATCAGATCCTTCAAACGAGCAGCTAG

mRNA sequence

ATGGCGGCTCTCACCTTTTACTCCAATTTTTACTCTGACCCTTCTTCAATCACTCACCAATTCCAGTATTTCTCCCCTGAATTCTCGCCGGAGCTCTTCTTTCTCCCTCCGCCGCATCTCGTCCCCGACCCCGCCTTCGATTATGTCCCTGCCGTGGTTGATGACTCCGATTCTTTCCCGACCGCCGCTCCGTTCTTCGACGACACCTTGTCGTTTCTTTTTTCCGATGTCTACCCGTACTTCTCCGCTCCGGTCGCCGATGAATTCGTTCCCGTCTCGGCCGAATTCTTCCCTTCTGATGAATTTGAGTTTCATTGCCCCAAACGACAGAGGGTTGTGTTGGAGCAGAGTTTTTGTTGCGGCGGTGTCGACGGCAATGTCGGTGGCGGAGAAGGCTACTTTCCTCCACCGGAGTTGTTTTTGGATCCTTGGAATGGTGGAATGGACAATGCTGAAATGATCAACGATGGTGGTTGCTTGAAGACTAAACCGTCGCCGTCATCGAGTAACAACTTGTCGGTGCAGACGATTGCAGCCCGGGAACGGCGGAGGAAGATCACGGCGAAGACGCAGGAGCTCGGAGAGCTGGTTCCGGGCGGTAGCAAGATGAACACTGCTGAAATGCTGAATTCTGCTTTCAAATATGTCAAATTCTTGCAAGCCCAAGTCGCCATTTTGCAACTCAAGCAAGAAACAGAGCAAGAGCAAGAAGAAGAAATAGAGGATCTTCAGATTCTCGAATCCACAGTGATTCAAGAGAAATTGTACTCAGAAGAAAAATGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTTCCAATCTCCCTGAGATTCAATCCGATCCGTCCATTTTCAACTCCATCAATCAGATCCTTCAAACGAGCAGCTAG

Coding sequence (CDS)

ATGGCGGCTCTCACCTTTTACTCCAATTTTTACTCTGACCCTTCTTCAATCACTCACCAATTCCAGTATTTCTCCCCTGAATTCTCGCCGGAGCTCTTCTTTCTCCCTCCGCCGCATCTCGTCCCCGACCCCGCCTTCGATTATGTCCCTGCCGTGGTTGATGACTCCGATTCTTTCCCGACCGCCGCTCCGTTCTTCGACGACACCTTGTCGTTTCTTTTTTCCGATGTCTACCCGTACTTCTCCGCTCCGGTCGCCGATGAATTCGTTCCCGTCTCGGCCGAATTCTTCCCTTCTGATGAATTTGAGTTTCATTGCCCCAAACGACAGAGGGTTGTGTTGGAGCAGAGTTTTTGTTGCGGCGGTGTCGACGGCAATGTCGGTGGCGGAGAAGGCTACTTTCCTCCACCGGAGTTGTTTTTGGATCCTTGGAATGGTGGAATGGACAATGCTGAAATGATCAACGATGGTGGTTGCTTGAAGACTAAACCGTCGCCGTCATCGAGTAACAACTTGTCGGTGCAGACGATTGCAGCCCGGGAACGGCGGAGGAAGATCACGGCGAAGACGCAGGAGCTCGGAGAGCTGGTTCCGGGCGGTAGCAAGATGAACACTGCTGAAATGCTGAATTCTGCTTTCAAATATGTCAAATTCTTGCAAGCCCAAGTCGCCATTTTGCAACTCAAGCAAGAAACAGAGCAAGAGCAAGAAGAAGAAATAGAGGATCTTCAGATTCTCGAATCCACAGTGATTCAAGAGAAATTGTACTCAGAAGAAAAATGTTTGGTTCCAAAAGGGTTCGTCCAAAATCTTTCCAATCTCCCTGAGATTCAATCCGATCCGTCCATTTTCAACTCCATCAATCAGATCCTTCAAACGAGCAGCTAG

Protein sequence

MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFPTAAPFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFCCGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLKTKPSPSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQEQEEEIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQILQTSS

Homology

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BLAST of Spg040054 vs. NCBI nr
Match: XP_038894685.1 (transcription factor bHLH52 [Benincasa hispida])

HSP 1 Score: 448.4 bits (1152), Expect = 4.9e-122
Identity = 246/312 (78.85%), Postives = 257/312 (82.37%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDP-AFDYVPAVVDDSDSF 60
           MAALTFYSNFYSDPSS  HQF YFSPEFSP+L + PPP L+ DP AFDY    VDDS  +
Sbjct: 1   MAALTFYSNFYSDPSSYYHQFHYFSPEFSPDLCYFPPPQLLHDPIAFDY----VDDSVFY 60

Query: 61  P-TAAPFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSF 120
           P TAAPFFDD   FLFSD YPYFS P  DEF+PVS EFFP DEFEFHCPKRQR VLEQSF
Sbjct: 61  PTTAAPFFDDAFPFLFSDAYPYFSTPAVDEFLPVSPEFFPCDEFEFHCPKRQRAVLEQSF 120

Query: 121 CC----GGVDGNVGGGEGYFPPP-------ELFLDPWNGGMDNAEMINDGGCLKTKPS-- 180
            C    GG  GNVGGG GYFPPP       ELF   W+G MDNAEM+NDGGCLKTKP+  
Sbjct: 121 RCGDGGGGGGGNVGGGGGYFPPPPTMTMTSELFSSAWDGRMDNAEMMNDGGCLKTKPTPV 180

Query: 181 PSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAI 240
           P SSNNLS QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAI
Sbjct: 181 PLSSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAI 240

Query: 241 LQLKQET--EQEQEEEIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSI 296
           LQLKQET  EQEQEEE EDL+ILEST+IQEKLYSEEKCLVPKGFVQNL+N PEIQS PSI
Sbjct: 241 LQLKQETEQEQEQEEETEDLRILESTMIQEKLYSEEKCLVPKGFVQNLANFPEIQSHPSI 300

[Close]

BLAST of Spg040054 vs. NCBI nr
Match: XP_023520229.1 (transcription factor bHLH52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 3.0e-119
Identity = 237/306 (77.45%), Postives = 254/306 (83.01%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDPAFDY+PA VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPAFDYLPAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFFDD   F+FSDVYPYF  P  D FVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFDDVSPFVFSDVYPYFPTPAVDSFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLK------TKPSPS-SSNNL 180
            GG  GNVGG  GYFP PE F D W+G + NAEM+N G CLK        PSPS SSNNL
Sbjct: 121 YGGGGGNVGGDGGYFPLPEFFSDQWDGRLGNAEMMNKGDCLKGTLTPAPLPSPSPSSNNL 180

Query: 181 SVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQET 240
           S QTIAARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQET
Sbjct: 181 SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQET 240

Query: 241 EQEQEE---EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQ 296
           EQEQE+   E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL N PEIQS+PSI NSINQ
Sbjct: 241 EQEQEQEQTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPSILNSINQ 300

[Close]

BLAST of Spg040054 vs. NCBI nr
Match: XP_023001636.1 (transcription factor bHLH52 [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 1.5e-118
Identity = 236/306 (77.12%), Postives = 253/306 (82.68%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDP FDY+PA VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPTFDYLPAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFFDD   F+FSDVYPYF  P  DEFVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFDDVSPFVFSDVYPYFPTPAVDEFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLK--------TKPSPS-SSN 180
            GG  GNVGG  GYFP PE F D W+G + NAEM+N G CLK          PSPS SSN
Sbjct: 121 YGGGGGNVGGEGGYFPLPEFFSDQWDGRLGNAEMMNKGDCLKGTPTLVPLPLPSPSPSSN 180

Query: 181 NLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQ 240
           NLS QTIAARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQ
Sbjct: 181 NLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQ 240

Query: 241 ETEQEQEE-EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQ 296
           ETEQEQE+ E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL+N  EIQS+PSI NSINQ
Sbjct: 241 ETEQEQEQTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLANSSEIQSNPSILNSINQ 300

[Close]

BLAST of Spg040054 vs. NCBI nr
Match: KAG6583823.1 (Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431.8 bits (1109), Expect = 4.8e-117
Identity = 230/298 (77.18%), Postives = 249/298 (83.56%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDPAFDY+PA VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPAFDYLPAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFF+D   F+FSDVYPY   P  D FVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFNDVSPFVFSDVYPYLPTPAVDSFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLKTKPSPS-SSNNLSVQTIA 180
            GG  GNVGG  GYFP PE F D W+G + NAE++N G CLK   +P+ SSNNLS QTIA
Sbjct: 121 YGGGGGNVGGDGGYFPLPEFFSDQWDGRLGNAELMNKGDCLKGTRTPAPSSNNLSAQTIA 180

Query: 181 ARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQEQEE 240
           ARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETEQEQE 
Sbjct: 181 ARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQETEQEQEH 240

Query: 241 -EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQILQTSS 296
            E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL N PEIQS+PSI NSINQIL  +S
Sbjct: 241 TETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPSILNSINQILHMNS 298

[Close]

BLAST of Spg040054 vs. NCBI nr
Match: XP_022927111.1 (transcription factor bHLH52-like [Cucurbita moschata])

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116
Identity = 231/302 (76.49%), Postives = 249/302 (82.45%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDPAFDY+ A VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPAFDYLHAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFFDD   F+FSDVYPYF  P  D FVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFDDVSPFVFSDVYPYFPTPAVDSFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLKTKPSPS-----SSNNLSV 180
            GG  GNVGG  GYFP PE F D W+G + NAE++N G CLK   +P+     SSNNLS 
Sbjct: 121 YGGGGGNVGGDGGYFPLPEFFSDQWDGRLGNAELMNKGDCLKGTLTPAPLPAPSSNNLSA 180

Query: 181 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQ 240
           QTIAARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETEQ
Sbjct: 181 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQETEQ 240

Query: 241 EQEE-EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQILQT 296
           EQE  E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL N PEIQS+PSI NSINQIL  
Sbjct: 241 EQERTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPSILNSINQILHM 300

[Close]

BLAST of Spg040054 vs. ExPASy Swiss-Prot
Match: Q9SA82 (Transcription factor bHLH52 OS=Arabidopsis thaliana OX=3702 GN=BHLH52 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.9e-24
Identity = 98/272 (36.03%), Postives = 139/272 (51.10%), Query Frame = 0


Query: 52  VVDDSDSF-----PTAAPFFDD---TLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEF- 111
           ++ ++DSF     P   P + D   + S    D Y +F     + F+P    F PS +  
Sbjct: 2   IIPETDSFFFQEQPQHQPLYPDEALSPSLFGFDHYDHF----YESFLPSQEIFLPSPKTR 61

Query: 112 ---------EFHCPKRQRVVLEQSFCCGGVDGNVGGGEGYFPPPE--LFLDPWNGGMDNA 171
                     FH PK Q+++ + SF       +    + + P PE    LD +     N 
Sbjct: 62  VFNESQELDSFHTPKHQKLI-DSSF-------HFNSHDPFSPSPESNYLLDSYITEASNI 121

Query: 172 EMI---NDGGCLK---TKPSPSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNT 231
                 +     K   T+   +    LS Q+IAAR+RRR+IT KTQELG+L+PG  K NT
Sbjct: 122 SKFQAPDFSSTFKVGWTEQGDTKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNT 181

Query: 232 AEMLNSAFKYVKFLQAQVAILQLKQETEQ--EQEEEIEDLQ-ILESTVIQEKLYSEEKCL 291
           AEM N+A KYVKFLQAQ+ ILQLKQ   Q  +  +   ++Q +L S  IQEKL +EE C+
Sbjct: 182 AEMFNAAAKYVKFLQAQIEILQLKQTKMQTLDSSKVGREMQFLLGSQEIQEKLSTEEVCV 241

Query: 292 VPKGFVQNLSNLPEIQSDPSIFNSINQILQTS 295
           VP+  VQ L     I ++P I   IN++L T+
Sbjct: 242 VPREMVQVLKAEECILTNPKISRDINKLLSTN 261

[Close]

BLAST of Spg040054 vs. ExPASy Swiss-Prot
Match: Q84RD0 (Transcription factor bHLH53 OS=Arabidopsis thaliana OX=3702 GN=BHLH53 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-22
Identity = 100/283 (35.34%), Postives = 139/283 (49.12%), Query Frame = 0


Query: 33  FFLPPPHLVPDPAFDYVPAVVDDSDSFPTAAPFFDD--TLSF---LFSDVYP---YFSAP 92
           F   PP  + D     +  ++ ++DSF     FF     L F   LF +  P   +F  P
Sbjct: 10  FNYDPPVQLQDCFIPEMDMIIPETDSF-----FFQSQPQLEFHQPLFQEEAPSQTHFD-P 69

Query: 93  VADEFVPVSAEFFPSD-----------EFEFHCPKRQRVVLEQSFCCGGVDGNVGGGEGY 152
             D+F+     F P+            +F    PKRQR+V   S+ C   +        +
Sbjct: 70  FCDQFLSPQEIFLPNPKNEIFNETHDLDFFLPTPKRQRLV-NSSYNCNTQNHFQSRNPNF 129

Query: 153 FPP-PELFLDPWNGGMDNAEMINDGGCLKT---KPSPSSSNNLSVQTIAARERRRKITAK 212
           F P  +    P +       + +     K        S    LS Q+IAAR RRR+I  K
Sbjct: 130 FDPFGDTDFVPESCTFQEFRVPDFSLAFKVGRGDQDDSKKPTLSSQSIAARGRRRRIAEK 189

Query: 213 TQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQ-EQEEEIEDLQILES 272
           T ELG+L+PGG+K+NTAEM  +A KYVKFLQ+QV ILQL Q T++     ++E   +LES
Sbjct: 190 THELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQVGILQLMQTTKKGSSNVQMETQYLLES 249

Query: 273 TVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQIL 292
             IQEKL +EE CLVP   VQ+L+    I   P+I   IN++L
Sbjct: 250 QAIQEKLSTEEVCLVPCEMVQDLTTEETICRTPNISREINKLL 285

[Close]

BLAST of Spg040054 vs. ExPASy Swiss-Prot
Match: Q7XAQ6 (Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-08
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 136 PPELFLDPWNGGMDNAEMINDGGCLKTKPSPSSSNNLSVQTIAARERRRKITAKTQELGE 195
           P    L P  GG+    M   G     +  P +  +   Q++AARERR +I+ + + L  
Sbjct: 11  PQPYHLHPTAGGLGEGRMRGGG-----RRRPGAKLSTDPQSVAARERRHRISDRFRVLRS 70

Query: 196 LVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ--LKQETEQEQEEEI 241
           LVPGGSKM+T  ML  A  YVKFL+AQV + Q  L Q  E  Q  ++
Sbjct: 71  LVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEEGCQHADV 112

[Close]

BLAST of Spg040054 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.4e-08
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 175 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 228
           QT+AAR+RR +I+ K + L  LVPGG+KM+TA ML+ A  Y+KFL+AQV  L+
Sbjct: 280 QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

[Close]

BLAST of Spg040054 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 162 TKPSPSSSN---NLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKF 221
           T P P+  N   +   QT+ AR RR +I+ K + L  +VPGG+KM+TA ML+ A +Y KF
Sbjct: 107 TVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKF 166

Query: 222 LQAQVAILQ 228
           L+ QV ILQ
Sbjct: 167 LKRQVRILQ 175

[Close]

BLAST of Spg040054 vs. ExPASy TrEMBL
Match: A0A6J1KJ69 (transcription factor bHLH52 OS=Cucurbita maxima OX=3661 GN=LOC111495708 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 7.2e-119
Identity = 236/306 (77.12%), Postives = 253/306 (82.68%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDP FDY+PA VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPTFDYLPAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFFDD   F+FSDVYPYF  P  DEFVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFDDVSPFVFSDVYPYFPTPAVDEFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLK--------TKPSPS-SSN 180
            GG  GNVGG  GYFP PE F D W+G + NAEM+N G CLK          PSPS SSN
Sbjct: 121 YGGGGGNVGGEGGYFPLPEFFSDQWDGRLGNAEMMNKGDCLKGTPTLVPLPLPSPSPSSN 180

Query: 181 NLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQ 240
           NLS QTIAARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQ
Sbjct: 181 NLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQ 240

Query: 241 ETEQEQEE-EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQ 296
           ETEQEQE+ E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL+N  EIQS+PSI NSINQ
Sbjct: 241 ETEQEQEQTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLANSSEIQSNPSILNSINQ 300

[Close]

BLAST of Spg040054 vs. ExPASy TrEMBL
Match: A0A6J1EGS4 (transcription factor bHLH52-like OS=Cucurbita moschata OX=3662 GN=LOC111434050 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.1e-117
Identity = 231/302 (76.49%), Postives = 249/302 (82.45%), Query Frame = 0


Query: 1   MAALTFYSNFYSDPSSITHQFQYFSPEFSPELFFLPPPHLVPDPAFDYVPAVVDDSDSFP 60
           MAAL+FYSNF SDPSS  HQF  FSPE SPELF LPPP L+PDPAFDY+ A VD S  FP
Sbjct: 1   MAALSFYSNFSSDPSSYHHQFHPFSPEISPELFHLPPPQLLPDPAFDYLHAAVDHSVFFP 60

Query: 61  TA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQSFC 120
           TA APFFDD   F+FSDVYPYF  P  D FVPVSAEFFP DEFEF+CPKRQRVV+EQSFC
Sbjct: 61  TATAPFFDDVSPFVFSDVYPYFPTPAVDSFVPVSAEFFPCDEFEFYCPKRQRVVMEQSFC 120

Query: 121 CGGVDGNVGGGEGYFPPPELFLDPWNGGMDNAEMINDGGCLKTKPSPS-----SSNNLSV 180
            GG  GNVGG  GYFP PE F D W+G + NAE++N G CLK   +P+     SSNNLS 
Sbjct: 121 YGGGGGNVGGDGGYFPLPEFFSDQWDGRLGNAELMNKGDCLKGTLTPAPLPAPSSNNLSA 180

Query: 181 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQ 240
           QTIAARERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETEQ
Sbjct: 181 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLSSAFKYVKFLQAQVAILQVKQETEQ 240

Query: 241 EQEE-EIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQILQT 296
           EQE  E EDLQILEST+IQEKLY+EEKCLVPKGFVQNL N PEIQS+PSI NSINQIL  
Sbjct: 241 EQERTETEDLQILESTMIQEKLYAEEKCLVPKGFVQNLVNSPEIQSNPSILNSINQILHM 300

[Close]

BLAST of Spg040054 vs. ExPASy TrEMBL
Match: A0A5A7U090 (Transcription factor bHLH52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00680 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 228/318 (71.70%), Postives = 251/318 (78.93%), Query Frame = 0


Query: 1   MAALTFYSNFYS-DPSSITHQFQYFSPEFSPELFFLPPPHLVPDP-AFDYVPAVVDDSDS 60
           MAALTF+SNFYS DPSS    F YFSPEFSP+L ++PPPHL+ DP AF Y    VDDS  
Sbjct: 1   MAALTFHSNFYSPDPSS---YFHYFSPEFSPDLSYVPPPHLLSDPAAFPY----VDDSVF 60

Query: 61  FPTAAPFF-DDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQS 120
           +P A   F DD   FLFSD YPYFSAP  DEF+PVS++FFP DEFEFHCPKRQR V EQS
Sbjct: 61  YPAADTLFSDDAFPFLFSDAYPYFSAPSVDEFLPVSSQFFPFDEFEFHCPKRQRAVFEQS 120

Query: 121 FCCG-GV-DGNVGG-------GEGYFPPP--ELFLDPWNGGMDNAEMINDGGCLKTKPSP 180
           FCCG GV DGNVGG       G G+FPPP  E F  PW+  MDNAEM ND  CLK++PSP
Sbjct: 121 FCCGEGVGDGNVGGGGEGAGAGAGFFPPPLAEFFSGPWDSRMDNAEMTND--CLKSQPSP 180

Query: 181 S----SSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ 240
           +    SSNNLS QTIAARERRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ
Sbjct: 181 APPAPSSNNLSAQTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ 240

Query: 241 VAILQLKQETEQEQE-----EEIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEI 296
           VAILQLKQETEQEQE     +E E+L+ILEST+IQEKLY EEKCLVPKGF+QNL++ PEI
Sbjct: 241 VAILQLKQETEQEQEQEQEGQETENLKILESTLIQEKLYLEEKCLVPKGFIQNLADFPEI 300

[Close]

BLAST of Spg040054 vs. ExPASy TrEMBL
Match: A0A1S3BEE9 (transcription factor bHLH52 OS=Cucumis melo OX=3656 GN=LOC103488727 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 228/318 (71.70%), Postives = 251/318 (78.93%), Query Frame = 0


Query: 1   MAALTFYSNFYS-DPSSITHQFQYFSPEFSPELFFLPPPHLVPDP-AFDYVPAVVDDSDS 60
           MAALTF+SNFYS DPSS    F YFSPEFSP+L ++PPPHL+ DP AF Y    VDDS  
Sbjct: 1   MAALTFHSNFYSPDPSS---YFHYFSPEFSPDLSYVPPPHLLSDPAAFPY----VDDSVF 60

Query: 61  FPTAAPFF-DDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQS 120
           +P A   F DD   FLFSD YPYFSAP  DEF+PVS++FFP DEFEFHCPKRQR V EQS
Sbjct: 61  YPAADTLFSDDAFPFLFSDAYPYFSAPSVDEFLPVSSQFFPFDEFEFHCPKRQRAVFEQS 120

Query: 121 FCCG-GV-DGNVGG-------GEGYFPPP--ELFLDPWNGGMDNAEMINDGGCLKTKPSP 180
           FCCG GV DGNVGG       G G+FPPP  E F  PW+  MDNAEM ND  CLK++PSP
Sbjct: 121 FCCGEGVGDGNVGGGGEGAGAGAGFFPPPLAEFFSGPWDSRMDNAEMTND--CLKSQPSP 180

Query: 181 S----SSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ 240
           +    SSNNLS QTIAARERRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ
Sbjct: 181 APPAPSSNNLSAQTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQ 240

Query: 241 VAILQLKQETEQEQE-----EEIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEI 296
           VAILQLKQETEQEQE     +E E+L+ILEST+IQEKLY EEKCLVPKGF+QNL++ PEI
Sbjct: 241 VAILQLKQETEQEQEQEQEGQETENLKILESTLIQEKLYLEEKCLVPKGFIQNLADFPEI 300

[Close]

BLAST of Spg040054 vs. ExPASy TrEMBL
Match: A0A0A0LY56 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G542450 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 3.1e-106
Identity = 225/315 (71.43%), Postives = 247/315 (78.41%), Query Frame = 0


Query: 1   MAALTFYSNFYS-DPSSITHQFQYFSPEFSPELFFLPPPHLVPDP-AFDYVPAVVDDSDS 60
           MAALT+YSNFYS DPS   H F YFSPEFSP+L ++PPP L+  P AFDY    VDDS  
Sbjct: 1   MAALTYYSNFYSPDPSPYYHHFHYFSPEFSPDLSYVPPPQLLNHPAAFDY----VDDSLF 60

Query: 61  FPTA-APFFDDTLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEFEFHCPKRQRVVLEQS 120
           +PTA    FDD L FLFSD YP FSAP  DEF+PVS++FFP DEFEFHCPKRQR V E S
Sbjct: 61  YPTADTLLFDDALPFLFSDTYPCFSAPSVDEFLPVSSQFFPFDEFEFHCPKRQRAVFEHS 120

Query: 121 FCCGG--VDGNVGG-----GEGYFPPP--------ELFLDPWNGGMDNAEMINDGGCLKT 180
           FCCGG   DGNVGG     G G+FP P        E+F  PW+  MDNAEM ND  CLK+
Sbjct: 121 FCCGGGVGDGNVGGGGSGAGAGFFPSPPPPPPPLAEVFSGPWDSRMDNAEMRND--CLKS 180

Query: 181 KPS--PSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQ 240
           +PS  PSS NNLS QTIAARERRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQ
Sbjct: 181 QPSPAPSSHNNLSAQTIAARERRRKITVKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQ 240

Query: 241 AQVAILQLKQETEQEQEEEIEDLQILESTVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSD 296
           AQVAILQLKQETEQE  +E E+L+ILEST+IQEKLYSEEKCLVPKGF+QNL++ PEIQS 
Sbjct: 241 AQVAILQLKQETEQE-GQETENLEILESTMIQEKLYSEEKCLVPKGFIQNLADFPEIQSH 300

[Close]

BLAST of Spg040054 vs. TAIR 10
Match: AT1G30670.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-25
Identity = 98/272 (36.03%), Postives = 139/272 (51.10%), Query Frame = 0


Query: 52  VVDDSDSF-----PTAAPFFDD---TLSFLFSDVYPYFSAPVADEFVPVSAEFFPSDEF- 111
           ++ ++DSF     P   P + D   + S    D Y +F     + F+P    F PS +  
Sbjct: 2   IIPETDSFFFQEQPQHQPLYPDEALSPSLFGFDHYDHF----YESFLPSQEIFLPSPKTR 61

Query: 112 ---------EFHCPKRQRVVLEQSFCCGGVDGNVGGGEGYFPPPE--LFLDPWNGGMDNA 171
                     FH PK Q+++ + SF       +    + + P PE    LD +     N 
Sbjct: 62  VFNESQELDSFHTPKHQKLI-DSSF-------HFNSHDPFSPSPESNYLLDSYITEASNI 121

Query: 172 EMI---NDGGCLK---TKPSPSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNT 231
                 +     K   T+   +    LS Q+IAAR+RRR+IT KTQELG+L+PG  K NT
Sbjct: 122 SKFQAPDFSSTFKVGWTEQGDTKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNT 181

Query: 232 AEMLNSAFKYVKFLQAQVAILQLKQETEQ--EQEEEIEDLQ-ILESTVIQEKLYSEEKCL 291
           AEM N+A KYVKFLQAQ+ ILQLKQ   Q  +  +   ++Q +L S  IQEKL +EE C+
Sbjct: 182 AEMFNAAAKYVKFLQAQIEILQLKQTKMQTLDSSKVGREMQFLLGSQEIQEKLSTEEVCV 241

Query: 292 VPKGFVQNLSNLPEIQSDPSIFNSINQILQTS 295
           VP+  VQ L     I ++P I   IN++L T+
Sbjct: 242 VPREMVQVLKAEECILTNPKISRDINKLLSTN 261

[Close]

BLAST of Spg040054 vs. TAIR 10
Match: AT2G34820.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 100/283 (35.34%), Postives = 139/283 (49.12%), Query Frame = 0


Query: 33  FFLPPPHLVPDPAFDYVPAVVDDSDSFPTAAPFFDD--TLSF---LFSDVYP---YFSAP 92
           F   PP  + D     +  ++ ++DSF     FF     L F   LF +  P   +F  P
Sbjct: 10  FNYDPPVQLQDCFIPEMDMIIPETDSF-----FFQSQPQLEFHQPLFQEEAPSQTHFD-P 69

Query: 93  VADEFVPVSAEFFPSD-----------EFEFHCPKRQRVVLEQSFCCGGVDGNVGGGEGY 152
             D+F+     F P+            +F    PKRQR+V   S+ C   +        +
Sbjct: 70  FCDQFLSPQEIFLPNPKNEIFNETHDLDFFLPTPKRQRLV-NSSYNCNTQNHFQSRNPNF 129

Query: 153 FPP-PELFLDPWNGGMDNAEMINDGGCLKT---KPSPSSSNNLSVQTIAARERRRKITAK 212
           F P  +    P +       + +     K        S    LS Q+IAAR RRR+I  K
Sbjct: 130 FDPFGDTDFVPESCTFQEFRVPDFSLAFKVGRGDQDDSKKPTLSSQSIAARGRRRRIAEK 189

Query: 213 TQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEQ-EQEEEIEDLQILES 272
           T ELG+L+PGG+K+NTAEM  +A KYVKFLQ+QV ILQL Q T++     ++E   +LES
Sbjct: 190 THELGKLIPGGNKLNTAEMFQAAAKYVKFLQSQVGILQLMQTTKKGSSNVQMETQYLLES 249

Query: 273 TVIQEKLYSEEKCLVPKGFVQNLSNLPEIQSDPSIFNSINQIL 292
             IQEKL +EE CLVP   VQ+L+    I   P+I   IN++L
Sbjct: 250 QAIQEKLSTEEVCLVPCEMVQDLTTEETICRTPNISREINKLL 285

[Close]

BLAST of Spg040054 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.0e-09
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 175 QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ 228
           QT+AAR+RR +I+ K + L  LVPGG+KM+TA ML+ A  Y+KFL+AQV  L+
Sbjct: 280 QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

[Close]

BLAST of Spg040054 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-09
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 162 TKPSPSSSN---NLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKF 221
           T P P+  N   +   QT+ AR RR +I+ K + L  +VPGG+KM+TA ML+ A +Y KF
Sbjct: 107 TVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKF 166

Query: 222 LQAQVAILQ 228
           L+ QV ILQ
Sbjct: 167 LKRQVRILQ 175

[Close]

BLAST of Spg040054 vs. TAIR 10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6 )

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-08
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 151 AEMINDGGCLKTKPSPSSSNNLSVQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLN 210
           ++ ++ G   KTKP P++S     Q++AA+ RR +I+ + + L ELVP G+K++   ML 
Sbjct: 183 SKKLSSGVTGKTKPKPTTSPK-DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLE 242

Query: 211 SAFKYVKFLQAQVAIL 227
            A  YVKFLQ QV +L
Sbjct: 243 KAISYVKFLQVQVKVL 257

The following BLAST results are available for this feature:

BLAST of Spg040054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894685.1	4.9e-122	78.85	transcription factor bHLH52 [Benincasa hispida]	[more]
XP_023520229.1	3.0e-119	77.45	transcription factor bHLH52-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001636.1	1.5e-118	77.12	transcription factor bHLH52 [Cucurbita maxima]	[more]
KAG6583823.1	4.8e-117	77.18	Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma ...	[more]
XP_022927111.1	1.1e-116	76.49	transcription factor bHLH52-like [Cucurbita moschata]	[more]

BLAST of Spg040054 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA82	4.9e-24	36.03	Transcription factor bHLH52 OS=Arabidopsis thaliana OX=3702 GN=BHLH52 PE=2 SV=1	[more]
Q84RD0	1.6e-22	35.34	Transcription factor bHLH53 OS=Arabidopsis thaliana OX=3702 GN=BHLH53 PE=2 SV=1	[more]
Q7XAQ6	3.8e-08	39.25	Transcription factor LAX PANICLE 1 OS=Oryza sativa subsp. japonica OX=39947 GN=L...	[more]
Q8S3D2	8.4e-08	56.60	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	1.1e-07	47.83	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of Spg040054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJ69	7.2e-119	77.12	transcription factor bHLH52 OS=Cucurbita maxima OX=3661 GN=LOC111495708 PE=4 SV=...	[more]
A0A6J1EGS4	5.1e-117	76.49	transcription factor bHLH52-like OS=Cucurbita moschata OX=3662 GN=LOC111434050 P...	[more]
A0A5A7U090	1.1e-106	71.70	Transcription factor bHLH52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BEE9	1.1e-106	71.70	transcription factor bHLH52 OS=Cucumis melo OX=3656 GN=LOC103488727 PE=4 SV=1	[more]
A0A0A0LY56	3.1e-106	71.43	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G542450 PE=4 S...	[more]

BLAST of Spg040054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30670.1	3.5e-25	36.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G34820.1	1.1e-23	35.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	6.0e-09	56.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	7.8e-09	47.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G66470.1	1.0e-08	42.11	ROOT HAIR DEFECTIVE6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 216..249
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 53..286
None	No IPR available	PANTHER	PTHR16223:SF49	TRANSCRIPTION FACTOR BHLH52-RELATED	coord: 53..286
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 176..225 e-value: 1.8E-9 score: 47.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 179..220 e-value: 1.2E-5 score: 25.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 170..219 score: 12.042501
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 173..246 e-value: 1.5E-10 score: 43.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 169..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg040054.1	Spg040054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding