Spg039941 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCGCTACTGCAGTCGCCACGGACAGCTCGCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACGGTGACGACAACGACCGAGATGAATGAGATCGACAAGTTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA ATGCCTGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCGCTACTGCAGTCGCCACGGACAGCTCGCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACGGTGACGACAACGACCGAGATGAATGAGATCGACAAGTTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA ATGCCTGTGCCGGATCCCGTCTGGGAAGGCCATTTTTACTATGACGCCGCTACTGCAGTCGCCACGGACAGCTCGCAGCTGTCCGGGTATCTGCAGTGGTTGGAGGAGAGAAAATTGGAGAGCGAGACGACGACGGTGACGACAACGACCGAGATGAATGAGATCGACAAGTTGGCGGAGATGTTCATAGCAAGCTGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCAGCAAGAAGATTTCAAGAGATGATGGCTAGAAGCATGTGA MPVPDPVWEGHFYYDAATAVATDSSQLSGYLQWLEERKLESETTTVTTTTEMNEIDKLAEMFIASCHEKFRLEKQESARRFQEMMARSM Homology
BLAST of Spg039941 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.3 bits (386), Expect = 9.9e-34 Identity = 82/92 (89.13%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Spg039941 vs. NCBI nr
Match: XP_022961611.1 (uncharacterized protein LOC111462262 [Cucurbita moschata] >KAG6602421.1 hypothetical protein SDJN03_07654, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 82/91 (90.11%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of Spg039941 vs. NCBI nr
Match: KAG7033099.1 (hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 3.8e-33 Identity = 81/91 (89.01%), Postives = 81/91 (89.01%), Query Frame = 0
BLAST of Spg039941 vs. NCBI nr
Match: XP_008458796.1 (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo] >KAA0037558.1 DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK03114.1 DUF761 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32 Identity = 78/93 (83.87%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Spg039941 vs. NCBI nr
Match: XP_038890518.1 (uncharacterized protein LOC120080048 [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 3.2e-32 Identity = 78/91 (85.71%), Postives = 79/91 (86.81%), Query Frame = 0
BLAST of Spg039941 vs. ExPASy TrEMBL
Match: A0A6J1HAU6 (uncharacterized protein LOC111462262 OS=Cucurbita moschata OX=3662 GN=LOC111462262 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.2e-34 Identity = 82/91 (90.11%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of Spg039941 vs. ExPASy TrEMBL
Match: A0A5D3BVA7 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00500 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32 Identity = 78/93 (83.87%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Spg039941 vs. ExPASy TrEMBL
Match: A0A1S3C8P2 (uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32 Identity = 78/93 (83.87%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Spg039941 vs. ExPASy TrEMBL
Match: A0A0A0KP26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 80/92 (86.96%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Spg039941 vs. ExPASy TrEMBL
Match: A0A6J1JV22 (uncharacterized protein LOC111487754 OS=Cucurbita maxima OX=3661 GN=LOC111487754 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.6e-32 Identity = 79/91 (86.81%), Postives = 80/91 (87.91%), Query Frame = 0
BLAST of Spg039941 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 4.6e-13 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Spg039941 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Spg039941 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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