Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCTGGAGATCAGTAAGAGGAGGAGGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATCGGCTAATCTTCTCCAAACTCTCTATCTCCAATTTGCCTGTCTGCAGGCTTGTCTGTAAATCTTGGAATTGTCTAATTTTAGATTACGCTTCTTCTTCTTCTAAATTACTCCTTTCAAACATTCTCCTTTTCTCCAATTTCGTTCCTCCGAGACGTAGTCTACGTAATAGTCTTAGTCATAGTCTTAGTCGTTGGAAGACCAAGATCCATTGTCTCGACTTGAGTTTGACGACACTGATGGGTCAGACATCATCTACATCATCTTTCTCAACTCCTGCAACGGCCTGCTCTTTATTTCCAAACATTTCTCCTGTGACTATTGCAAAGATGTCTCCTCTTCGAAAGATTCCCCATGTGAGTGTTTCTATGATGATGGCATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAGCCCTAAGACCAAGCAATACAAATTGTTCAAAGCAAACTGTCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGAACCAATCAAAATCAAAACCAATGGAGGTCCCTGCCTTTTGCCCTAACACTTTCCAGTAGTGGTACTTACTTCAATGGAGTGATGTATTGGATCGGAGCACAAAATGAAAATGAGTGTGCCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATCTATTGCGGTTTTGGAAGTTCGCTCTTTCCCCAAATGGGCGAGGATTCAGGCCTTGAATGACACCATTTATGCAATTATTCACGTGTACCCATTCGCACCAAAAATGGATAGAGAATTCCCACCAACTCATAAGATTCAAGTGTGGAGGATGCGGAGGAAAGATTTATGGGTCAAAAGATTTTGTTATTCATGA
mRNA sequence
ATGGAGAAGCTGGAGATCAGTAAGAGGAGGAGGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATCGGCTAATCTTCTCCAAACTCTCTATCTCCAATTTGCCTGTCTGCAGGCTTTCGTTGGAAGACCAAGATCCATTGTCTCGACTTGAGTTTGACGACACTGATGGGTCAGACATCATCTACATCATCTTTCTCAACTCCTGCAACGGCCTGCTCTTTATTTCCAAACATTTCTCCTGTGACTATTGCAAAGATGTCTCCTCTTCGAAAGATTCCCCATGTGAGTGTTTCTATGATGATGGCATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAGCCCTAAGACCAAGCAATACAAATTGTTCAAAGCAAACTGTCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGAACCAATCAAAATCAAAACCAATGGAGGTCCCTGCCTTTTGCCCTAACACTTTCCAGTAGTGGTACTTACTTCAATGGAGTGATGTATTGGATCGGAGCACAAAATGAAAATGAGTGTGCCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATCTATTGCGGTTTTGGAAGTTCGCTCTTTCCCCAAATGGGCGAGGATTCAGGCCTTGAATGACACCATTTATGCAATTATTCACGTGTACCCATTCGCACCAAAAATGGATAGAGAATTCCCACCAACTCATAAGATTCAAGTGTGGAGGATGCGGAGGAAAGATTTATGGGTCAAAAGATTTTGTTATTCATGA
Coding sequence (CDS)
ATGGAGAAGCTGGAGATCAGTAAGAGGAGGAGGATTATGAAGGGCAATTGGGAGCTTCTGCCTCATATTCATCGGCTAATCTTCTCCAAACTCTCTATCTCCAATTTGCCTGTCTGCAGGCTTTCGTTGGAAGACCAAGATCCATTGTCTCGACTTGAGTTTGACGACACTGATGGGTCAGACATCATCTACATCATCTTTCTCAACTCCTGCAACGGCCTGCTCTTTATTTCCAAACATTTCTCCTGTGACTATTGCAAAGATGTCTCCTCTTCGAAAGATTCCCCATGTGAGTGTTTCTATGATGATGGCATATTTAATCCAATGACTGGGGAATTCTTCAAACTTAATGGACCTGTATCAGAAGATGATAATTTCGTATTCGGATTTGGTTTCAGCCCTAAGACCAAGCAATACAAATTGTTCAAAGCAAACTGTCTAGAATCCAGTCTTACAATGGAGATTTTCACGATTGGTAGAGGTGGAACCAATCAAAATCAAAACCAATGGAGGTCCCTGCCTTTTGCCCTAACACTTTCCAGTAGTGGTACTTACTTCAATGGAGTGATGTATTGGATCGGAGCACAAAATGAAAATGAGTGTGCCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATCTATTGCGGTTTTGGAAGTTCGCTCTTTCCCCAAATGGGCGAGGATTCAGGCCTTGAATGACACCATTTATGCAATTATTCACGTGTACCCATTCGCACCAAAAATGGATAGAGAATTCCCACCAACTCATAAGATTCAAGTGTGGAGGATGCGGAGGAAAGATTTATGGGTCAAAAGATTTTGTTATTCATGA
Protein sequence
MEKLEISKRRRIMKGNWELLPHIHRLIFSKLSISNLPVCRLSLEDQDPLSRLEFDDTDGSDIIYIIFLNSCNGLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGFSPKTKQYKLFKANCLESSLTMEIFTIGRGGTNQNQNQWRSLPFALTLSSSGTYFNGVMYWIGAQNENECAIYGLDVETEKIESIAVLEVRSFPKWARIQALNDTIYAIIHVYPFAPKMDREFPPTHKIQVWRMRRKDLWVKRFCYS
Homology
BLAST of Spg039890 vs. NCBI nr
Match:
XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])
HSP 1 Score: 166.4 bits (420), Expect = 3.5e-37
Identity = 127/335 (37.91%), Postives = 160/335 (47.76%), Query Frame = 0
Query: 1 MEKLEISKRRRIMKGNWELLPHIHRLIFSKLSISNLPVCR-------------------- 60
ME LE +K+R M N L PHI R IFSKLSISNLP CR
Sbjct: 1 MEILE-TKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFL 60
Query: 61 ------LSLEDQ--------------------DPLSRLEFDDTDG--SDIIYIIFLNSCN 120
LS+ D+ D S+ + + G D YI +NSCN
Sbjct: 61 PTTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCN 120
Query: 121 GLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGF 180
GLL+I K + DS CE GI NPMT EF ++ P E D GFGF
Sbjct: 121 GLLYICKF-----------TFDSLCE-----GILNPMTNEFMEIPQPEIELDVHSIGFGF 180
Query: 181 SPKTKQYKLFKA------NCLESSLTMEIFTIGRGGTNQNQNQWR---SLPFALTLSSSG 240
SP+TKQYKLF+ N + MEIFT G QWR LPF + G
Sbjct: 181 SPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFDNG-----YKQWRHFERLPF--VVFHHG 240
Query: 241 TYFNGVMYWIG--AQNENECAIYGLDVETEKIESIAVLEVRSFPKWARIQALNDTIYAII 276
Y NGV+YWIG + E E IY LDV+TE++E A LE+ K I+ + +YAII
Sbjct: 241 QYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIGPSLKNGSIKIFEERVYAII 300
BLAST of Spg039890 vs. NCBI nr
Match:
XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])
HSP 1 Score: 161.4 bits (407), Expect = 1.1e-35
Identity = 110/292 (37.67%), Postives = 153/292 (52.40%), Query Frame = 0
Query: 4 LEISKRRRIMKGNWELLPHIHRLIFSKLSISNLPVCRLSLEDQDPLSRLEFDDT------ 63
L+ S +++ ++ L I S+ N + L+D D S +EF+
Sbjct: 42 LDYSSSSKLLTNDFILFTRDGNPICGSSSLYNPKMHCFRLDDLDVDSDMEFEVNKFASLR 101
Query: 64 -DGSDIIYIIFLNSCNGLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKL 123
DG D +I+ + SCNGLL ISK S Y C C GIFNPMT EFF++
Sbjct: 102 FDG-DWSFILPIRSCNGLLLISK--STFY-----------CSCM---GIFNPMTNEFFRV 161
Query: 124 NGPVSEDDNFVFGFGFSPKTKQYKLFKANCLES---SLTMEIFTIGRGGTN----QNQNQ 183
+ + +V+GFGF P TK YKLF+ + S ME+ T GRGG N Q+QNQ
Sbjct: 162 PRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYSSRMEVLTFGRGGINPNPKQSQNQ 221
Query: 184 WRSL-PFALTLSSSGTYFNGVMYWIGAQ--NENECAIYGLDVETEKIESIAVLEVRSFPK 243
WR L + G YFNG++YW+G + +NE IY LDVE+EKI+ AVL+V F
Sbjct: 222 WRHLYSIPSDICCKGAYFNGIIYWLGREKDEQNEYVIYTLDVESEKIKLSAVLKVGPFSH 281
Query: 244 WAR--IQALNDTIYAIIHVYPFAPKMDREFPPTH-KIQVWRMRRKDLWVKRF 276
+ + IQ N ++YAI H+ P P T+ +IQVW+M KD W++ F
Sbjct: 282 YNKVYIQQFNGSVYAIFHILP---------PTTNERIQVWKMEEKDSWIRDF 307
BLAST of Spg039890 vs. NCBI nr
Match:
XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])
HSP 1 Score: 156.4 bits (394), Expect = 3.6e-34
Identity = 94/225 (41.78%), Postives = 122/225 (54.22%), Query Frame = 0
Query: 64 YIIFLNSCNGLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSED 123
++ +N C+GLL I K + C DGIFNPMT EF ++ ++
Sbjct: 108 FMAIMNYCSGLLLICKCANYTRC----------------DGIFNPMTNEFLQVPRGQLDN 167
Query: 124 DNFVFGFGFSPKTKQYKLFKA------NC-LESSLTMEIFTIGRGGTNQNQNQWRSLPF- 183
D + FGFGF+ TKQYKLF+ NC ES M++ T R GTN N NQWR L +
Sbjct: 168 DIYYFGFGFTTTTKQYKLFRVCDSFSRNCEFESGSIMDVLTFSRSGTNANHNQWRYLHYL 227
Query: 184 ALTLSSSGTYFNGVMYWIG--AQNENECAIYGLDVETEKIESIAVLEV---RSFPKWARI 243
L + S+G Y NG +YWIG + ENE AIY LDVETEKIE VLE+ K +
Sbjct: 228 PLDIHSNGAYLNGFIYWIGKEEEKENEYAIYVLDVETEKIELSIVLEICPPLCTSKVGGM 287
Query: 244 QALNDTIYAIIHVYPFAPKMDREFPPTHKIQVWRMRRKDLWVKRF 276
Q ND++YAI + P + IQVWRM+ KDLW++ F
Sbjct: 288 QQFNDSVYAIFLI---------NQPTGNSIQVWRMQEKDLWIREF 307
BLAST of Spg039890 vs. NCBI nr
Match:
KAA0039382.1 (F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 153.7 bits (387), Expect = 2.4e-33
Identity = 102/259 (39.38%), Postives = 133/259 (51.35%), Query Frame = 0
Query: 31 LSISNLPVCRLSLEDQDPLSRLEFDDTDG--SDIIYIIFLNSCNGLLFISKHFSCDYCKD 90
+ + P C + D S+ + + G D YI +NSCNGLL+I K
Sbjct: 9 IPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKF-------- 68
Query: 91 VSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGFSPKTKQYKLFKA---- 150
+ DS CE GI NPMT EF ++ P E D GFGFSP+TKQYKLF+
Sbjct: 69 ---TFDSLCE-----GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 128
Query: 151 --NCLESSLTMEIFTIGRGGTNQNQNQWR---SLPFALTLSSSGTYFNGVMYWIG--AQN 210
N + MEIFT G QWR LPF + G Y NGV+YWIG +
Sbjct: 129 LENLKKCHYIMEIFTFDNG-----YKQWRHFERLPF--VVFHHGQYLNGVIYWIGKKLEK 188
Query: 211 ENECAIYGLDVETEKIESIAVLEVRSFPKWARIQALNDTIYAIIHVYPFAPKMDREFPPT 270
E E IY LDV+TE++E IA LE+ F K I+ + +YAII + MD+ PT
Sbjct: 189 EGEAVIYALDVDTEQMECIATLEIGPFLKNGSIKIFEERVYAIISL------MDKRVSPT 238
Query: 271 -HKIQVWRMRRKDLWVKRF 276
+KI++WRM+ KD W+K F
Sbjct: 249 SYKIELWRMQTKDSWIKEF 238
BLAST of Spg039890 vs. NCBI nr
Match:
KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 149.8 bits (377), Expect = 3.4e-32
Identity = 102/270 (37.78%), Postives = 136/270 (50.37%), Query Frame = 0
Query: 15 GNWELLPHIHRLIFSKLSISNLPV-CRLSLEDQDPLSRLEFDDTDGSDIIYIIFL-NSCN 74
GN +L P ++ + F +L + L LE P S L FD D +I + NSCN
Sbjct: 74 GNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPS-LSFD----GDWSFIPMMDNSCN 133
Query: 75 GLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGF 134
GL+FI K C F+ DGIFNPMT EF ++ + DN+ +G GF
Sbjct: 134 GLVFIRK-----------------C-AFFSDGIFNPMTNEFLQVPRHELDGDNYFYGLGF 193
Query: 135 SPKTKQYKLFKANCLESSLTMEIFTIGRGGTNQNQNQWRSL-PFALTLSSSGTYFNGVMY 194
SP TKQYK+F+ N +S M I T R TN NQWR L + + G Y NG +Y
Sbjct: 194 SPTTKQYKMFRVNPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIY 253
Query: 195 WIGAQ--NENECAIYGLDVETEKIESIAVLEVRSFP----KWARIQALNDTIYAIIHVYP 254
W+G + ENE IY L+VETE+IE AVL + F ++ N ++YA ++ P
Sbjct: 254 WMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDP 312
Query: 255 FAPKMDREFPPTHKIQVWRMRRKDLWVKRF 276
IQVWRM+ KDLW+K F
Sbjct: 314 KT--------CNSVIQVWRMQEKDLWIKEF 312
BLAST of Spg039890 vs. ExPASy TrEMBL
Match:
A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 1.7e-37
Identity = 127/335 (37.91%), Postives = 160/335 (47.76%), Query Frame = 0
Query: 1 MEKLEISKRRRIMKGNWELLPHIHRLIFSKLSISNLPVCR-------------------- 60
ME LE +K+R M N L PHI R IFSKLSISNLP CR
Sbjct: 1 MEILE-TKKRIPMNINLRLPPHIVRAIFSKLSISNLPTCRVVCKTWNNLVLEYASSTKFL 60
Query: 61 ------LSLEDQ--------------------DPLSRLEFDDTDG--SDIIYIIFLNSCN 120
LS+ D+ D S+ + + G D YI +NSCN
Sbjct: 61 PTTTLFLSMADEISNYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCN 120
Query: 121 GLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGF 180
GLL+I K + DS CE GI NPMT EF ++ P E D GFGF
Sbjct: 121 GLLYICKF-----------TFDSLCE-----GILNPMTNEFMEIPQPEIELDVHSIGFGF 180
Query: 181 SPKTKQYKLFKA------NCLESSLTMEIFTIGRGGTNQNQNQWR---SLPFALTLSSSG 240
SP+TKQYKLF+ N + MEIFT G QWR LPF + G
Sbjct: 181 SPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFDNG-----YKQWRHFERLPF--VVFHHG 240
Query: 241 TYFNGVMYWIG--AQNENECAIYGLDVETEKIESIAVLEVRSFPKWARIQALNDTIYAII 276
Y NGV+YWIG + E E IY LDV+TE++E A LE+ K I+ + +YAII
Sbjct: 241 QYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIGPSLKNGSIKIFEERVYAII 300
BLAST of Spg039890 vs. ExPASy TrEMBL
Match:
A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 9.4e-36
Identity = 117/353 (33.14%), Postives = 164/353 (46.46%), Query Frame = 0
Query: 1 MEKLEISKRRRIMKGNWELLPHIHRLIFSKLSISNLPVCRL------------------- 60
+E +EIS+RR + L P I + IFSKL IS+LP CRL
Sbjct: 8 IENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDYASSTQLQ 67
Query: 61 ---------------------------SLEDQDPLSRLEFD-----------DTDGSDII 120
+L+ + + +FD DG
Sbjct: 68 FLKNAFLLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTY 127
Query: 121 YIIFLNSCNGLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSED 180
II SCNGL+ ISK +C+ GIFNPMT EF +++ + D
Sbjct: 128 TIIMAGSCNGLMLISKCSDYTWCQ----------------GIFNPMTNEFLQVSEHGTFD 187
Query: 181 DNFVFGFGFSPKTKQYKLFK-----------ANCLESSLTMEIFTIGRGGTNQN---QNQ 240
D +++GFGFSP TKQYKLF+ ++ +++ TME+ T GR GTN + NQ
Sbjct: 188 DFYLYGFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQ 247
Query: 241 WR---SLPFALTLSSSGTYFNGVMYWI----GAQNENECAIYGLDVETEKIESIAVLEVR 276
WR +LPF + + G Y NG++YW+ G E + IY LDVETE IE VL+V
Sbjct: 248 WRRLHTLPFEIV--ADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVP 307
BLAST of Spg039890 vs. ExPASy TrEMBL
Match:
A0A5A7T7C6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 102/259 (39.38%), Postives = 133/259 (51.35%), Query Frame = 0
Query: 31 LSISNLPVCRLSLEDQDPLSRLEFDDTDG--SDIIYIIFLNSCNGLLFISKHFSCDYCKD 90
+ + P C + D S+ + + G D YI +NSCNGLL+I K
Sbjct: 9 IPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKF-------- 68
Query: 91 VSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGFSPKTKQYKLFKA---- 150
+ DS CE GI NPMT EF ++ P E D GFGFSP+TKQYKLF+
Sbjct: 69 ---TFDSLCE-----GILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEV 128
Query: 151 --NCLESSLTMEIFTIGRGGTNQNQNQWR---SLPFALTLSSSGTYFNGVMYWIG--AQN 210
N + MEIFT G QWR LPF + G Y NGV+YWIG +
Sbjct: 129 LENLKKCHYIMEIFTFDNG-----YKQWRHFERLPF--VVFHHGQYLNGVIYWIGKKLEK 188
Query: 211 ENECAIYGLDVETEKIESIAVLEVRSFPKWARIQALNDTIYAIIHVYPFAPKMDREFPPT 270
E E IY LDV+TE++E IA LE+ F K I+ + +YAII + MD+ PT
Sbjct: 189 EGEAVIYALDVDTEQMECIATLEIGPFLKNGSIKIFEERVYAIISL------MDKRVSPT 238
Query: 271 -HKIQVWRMRRKDLWVKRF 276
+KI++WRM+ KD W+K F
Sbjct: 249 SYKIELWRMQTKDSWIKEF 238
BLAST of Spg039890 vs. ExPASy TrEMBL
Match:
A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 1.7e-32
Identity = 102/270 (37.78%), Postives = 136/270 (50.37%), Query Frame = 0
Query: 15 GNWELLPHIHRLIFSKLSISNLPV-CRLSLEDQDPLSRLEFDDTDGSDIIYIIFL-NSCN 74
GN +L P ++ + F +L + L LE P S L FD D +I + NSCN
Sbjct: 74 GNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPS-LSFD----GDWSFIPMMDNSCN 133
Query: 75 GLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGF 134
GL+FI K C F+ DGIFNPMT EF ++ + DN+ +G GF
Sbjct: 134 GLVFIRK-----------------C-AFFSDGIFNPMTNEFLQVPRHELDGDNYFYGLGF 193
Query: 135 SPKTKQYKLFKANCLESSLTMEIFTIGRGGTNQNQNQWRSL-PFALTLSSSGTYFNGVMY 194
SP TKQYK+F+ N +S M I T R TN NQWR L + + G Y NG +Y
Sbjct: 194 SPTTKQYKMFRVNPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIY 253
Query: 195 WIGAQ--NENECAIYGLDVETEKIESIAVLEVRSFP----KWARIQALNDTIYAIIHVYP 254
W+G + ENE IY L+VETE+IE AVL + F ++ N ++YA ++ P
Sbjct: 254 WMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDP 312
Query: 255 FAPKMDREFPPTHKIQVWRMRRKDLWVKRF 276
IQVWRM+ KDLW+K F
Sbjct: 314 KT--------CNSVIQVWRMQEKDLWIKEF 312
BLAST of Spg039890 vs. ExPASy TrEMBL
Match:
A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 4.8e-32
Identity = 103/270 (38.15%), Postives = 136/270 (50.37%), Query Frame = 0
Query: 15 GNWELLPHIHRLIFSKLSISNLPV-CRLSLEDQDPLSRLEFDDTDGSDIIYIIFL-NSCN 74
GN +L P ++ + F +L + L LE P S L FD D +I + NSCN
Sbjct: 77 GNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPS-LSFD----GDWSFIPMMDNSCN 136
Query: 75 GLLFISKHFSCDYCKDVSSSKDSPCECFYDDGIFNPMTGEFFKLNGPVSEDDNFVFGFGF 134
GL+FI K C S S DGIFNPMT EF ++ + DN+ +G GF
Sbjct: 137 GLVFIRK------CAFFSRS----------DGIFNPMTNEFLQVPRHELDGDNYFYGLGF 196
Query: 135 SPKTKQYKLFKANCLESSLTMEIFTIGRGGTNQNQNQWRSL-PFALTLSSSGTYFNGVMY 194
SP TKQYK+F+ N +S M I T R TN NQWR L + + G Y NG +Y
Sbjct: 197 SPTTKQYKMFRVNPNNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIY 256
Query: 195 WIGAQ--NENECAIYGLDVETEKIESIAVLEVRSFP----KWARIQALNDTIYAIIHVYP 254
W+G + ENE IY L+VETE+IE AVL + F ++ N ++YA ++ P
Sbjct: 257 WMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDP 316
Query: 255 FAPKMDREFPPTHKIQVWRMRRKDLWVKRF 276
IQVWRM+ KDLW+K F
Sbjct: 317 KT--------CNSVIQVWRMQEKDLWIKEF 317
BLAST of Spg039890 vs. TAIR 10
Match:
AT3G07870.1 (F-box and associated interaction domains-containing protein )
HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 43/176 (24.43%), Postives = 71/176 (40.34%), Query Frame = 0
Query: 68 LNSCNGLLFISKHFSCDYCKDVSSSKDSPCECFYDDG--IFNPMTGEFFKLNGPVSE--D 127
+ SCNGLL +S + Y+D ++NP T +L ++ D
Sbjct: 120 VGSCNGLLCLS-------------------DSLYNDSLYLYNPFTTNSLELPECSNKYHD 179
Query: 128 DNFVFGFGFSPKTKQYKLFKANCLESSLT------------------MEIFTIGRGGTNQ 187
VFGFGF TK+YK+ K S + ++I T+ T+Q
Sbjct: 180 QELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQ 239
Query: 188 NQNQWRSL---PFALTLSSSGTYFNGVMYWIGAQNEN--ECAIYGLDVETEKIESI 217
+ + WRSL P+ SS NG ++++ + + D+E E+ + I
Sbjct: 240 SLS-WRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEI 275
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CB99 | 1.7e-37 | 37.91 | F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1 | [more] |
A0A0A0LWG1 | 9.4e-36 | 33.14 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ... | [more] |
A0A5A7T7C6 | 1.1e-33 | 39.38 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850... | [more] |
A0A5A7TCF3 | 1.7e-32 | 37.78 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ... | [more] |
A0A5D3DMB7 | 4.8e-32 | 38.15 | F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140... | [more] |
Match Name | E-value | Identity | Description | |
AT3G07870.1 | 3.2e-04 | 24.43 | F-box and associated interaction domains-containing protein | [more] |