Spg039824 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039824
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription elongation factor TFIIS-like
Location	scaffold10: 45486056 .. 45488414 (-)
RNA-Seq Expression	Spg039824
Synteny	Spg039824

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTAAAAAAAAGGTTAATATAAAAAACTCCAAAATTATTTAAATGAAATCCAATGATCTTGATATGATTAAAAGTAAAACACGGTACTTTAGGTTGGCGTACAATTCAATTCCTGAAAGGTAAAGGGTTAAACGAAATACCCAAAACCCCCTTCCTCTCTTCACTCTGTCTATGGGTAAATAGGTAAAATTAAAGCTATTTTGACCTGTACTATCGCTCGGGGATCTTACCATAATCCTGTAGGCCACGTGTTTCGGGTTTGACCGTCCGATCTGATTCCTCTCTTGCTCGGTCTATCCTTATACCTCATCCCCAAGGTCGCGTTTTGATTTCTCTACTCTCTCTGCCCTCTCTCTGCCGAAATAATGGATTTTTCCGAAGCCCATTCTCATTGGGTTTCCGCTTATGTTTTCGATTTCTTCTATTTAGTGTGGGATTGCGAGCGTTTTTCCAGTCGTCGATTCAGATCTCTGTAAGTGTTACTCATTCGAAATTGATCAATTGCCATCGCCAGTGCGATGTCTTTTGATTCGATGGTATTCTTTTTCTTTTTCATTGAGAAAATAAGTCGAATTCGATTTTGATTGCGATAACCCCCCCTCCCCCCCCCCCCCCCCCCCCCCTTCTTTGTATGCGTCTGTTTGTATCTTTCCCTTTTATTGTTGTTGTTGGGATCTGATCATTCTTTTCTTGGAATGTGGTGGATAGGTTATATAAAAATTCCAAGTTGGCGGTGATTCGATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGTTGCAGACACCGCTGCAGCATCATCAAATGATGGGGGAGCTGAGGAAAGTCATTGTCTAGATGCGCTACGGCAGCTCAAGAAATTTCCTGTTACTTATCAAATCCTTGTTTCCACTCAGGTTTTCTTCTCATTAGACTTGAAATTTGTTTCTTTTGTTGATGGTGGATGGATAGTCAAAACGTAAAAAGCCGACTAGTTTGTAAAATCATACATCGTTTTTATTATGAATTAAGCCAAAATTCATTGTTTTTTTTTTTTGGCTTACAAATTGGTTTCATATCGAGCTGAGTTCACTCTATTTCATCTGTTATTTGAGTTGTTCACATGACGAAATCATCTCACCTGTGACTCTTTAAGTTTTTGGAATATAACTCTGGTTGGCGCCACAGTTGTTATATATTCTGTTCTGGAATTCTTATAATTCCTTTTCCCGTGTAATTGAGGTTCATTTGCCTGTGTTGATAGTTCCGTTATCTTGTCCTCTGTAGGTTGGGAAGCGGCTTCGGCACCTCACTAAACACCCCAGGAAGAAAATACAGGACTATGCTTCTGACCTGATTGTGAGATGTGGAAGGACATAGTAATGAAGGAGACCAACAAGAATAAGAAAAATGGAAATGCCAACTGTAAAGAGCGACCTAAAATTGGTTCTCCCAGTGCAGAGTTCGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAAAGTTTCCAAGGTTGAGCACTTCGATAGGAATGGTGCTACAAGCTTTGTAGAATTTTCAAGATCAGAAAGTGCCATCTCGGAGAAAAACTCTGTCAAGGTTGAGAAAATTGATTCAGTTGTCAAGGTTGAAAGAATAGTTAAAGAAGAGAAGAAAATCTCAATAGAAAAGAAACCATCAGGTGGGGCTACTGCACCTCCAAAGCTTACTTCCATGATTAAATCAAAAGATGCTGCTCGGGACAAAATTAGAGAACTTCTCTTTGAGGCATTCTCCAAGGTTCCTGGCGAGGCTGATGAAGATGTTATAGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACCGAAGCACAAAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTCCGGAGAAAAGTTCTACTAGGACTTATCAAGCCAGAAAGGCTGATCAACTTGAGCACAGCTGTTATGGCAAGTGATCAGAGAAAACGTGAGAATGAGGAGATTGCACAAAAGGCTTTATTTGTTTGTGAGCATGGAGGAGCTCCTAAAGCTACTACCGATCAGTTCAAGTGTGGTCGATGTGGTCAACGCAAGATGACCTACTATCAGTTGCAAACGCGGAGTGCTGATGAACCTATGACTACCTTTGTAACTTGTGTAAACTGCAATAACCATTGGAAGTTCTGTTGAGTTTCTCGTGAGCTGCTGAAAATGTTATTGTTTGGAACAAATTTACTGAGCTGCTAGTGTTATTTTGCCTTGACACTGTTGCAGTCTGTAATCTCATTCCACATTGCTACATTTAG

mRNA sequence

ATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGTTGCAGACACCGCTGCAGCATCATCAAATGATGGGGGAGCTGAGGAAAGTCATTGTCTAGATGCGCTACGGCAGCTCAAGAAATTTCCTGTTACTTATCAAATCCTTGTTTCCACTCAGGACATAGTAATGAAGGAGACCAACAAGAATAAGAAAAATGGAAATGCCAACTGTAAAGAGCGACCTAAAATTGGTTCTCCCAGTGCAGAGTTCGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAAAGTTTCCAAGGTTGAGCACTTCGATAGGAATGGTGCTACAAGCTTTGTAGAATTTTCAAGATCAGAAAGTGCCATCTCGGAGAAAAACTCTGTCAAGGTTGAGAAAATTGATTCAGTTGTCAAGGTTGAAAGAATAGTTAAAGAAGAGAAGAAAATCTCAATAGAAAAGAAACCATCAGGTGGGGCTACTGCACCTCCAAAGCTTACTTCCATGATTAAATCAAAAGATGCTGCTCGGGACAAAATTAGAGAACTTCTCTTTGAGGCATTCTCCAAGGTTCCTGGCGAGGCTGATGAAGATGTTATAGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACCGAAGCACAAAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTCCGGAGAAAAGTTCTACTAGGACTTATCAAGCCAGAAAGGCTGATCAACTTGAGCACAGCTGTTATGGCAATCTGTAATCTCATTCCACATTGCTACATTTAG

Coding sequence (CDS)

ATGGAGAATGAGCTGGTGGAATTGTTTGAAGCGGCGAAGAAGGTTGCAGACACCGCTGCAGCATCATCAAATGATGGGGGAGCTGAGGAAAGTCATTGTCTAGATGCGCTACGGCAGCTCAAGAAATTTCCTGTTACTTATCAAATCCTTGTTTCCACTCAGGACATAGTAATGAAGGAGACCAACAAGAATAAGAAAAATGGAAATGCCAACTGTAAAGAGCGACCTAAAATTGGTTCTCCCAGTGCAGAGTTCGTTAAGGTGGAGAAGTTTCAAAAATCATCTTCCATGAAGGTTGAGAAAGTTTCCAAGGTTGAGCACTTCGATAGGAATGGTGCTACAAGCTTTGTAGAATTTTCAAGATCAGAAAGTGCCATCTCGGAGAAAAACTCTGTCAAGGTTGAGAAAATTGATTCAGTTGTCAAGGTTGAAAGAATAGTTAAAGAAGAGAAGAAAATCTCAATAGAAAAGAAACCATCAGGTGGGGCTACTGCACCTCCAAAGCTTACTTCCATGATTAAATCAAAAGATGCTGCTCGGGACAAAATTAGAGAACTTCTCTTTGAGGCATTCTCCAAGGTTCCTGGCGAGGCTGATGAAGATGTTATAGATGAAGTAAATGCAAGTGATCCTATCCGTGTTGCTGTTTCTGTAGAATCCGTGATGTTTGAAAATTGGGGAGGTTCTACCGAAGCACAAAAGGCCAAGTACAGATCTATAATGTTTAACCTCAAGGATCCGAAGAACCCAGACTTCCGGAGAAAAGTTCTACTAGGACTTATCAAGCCAGAAAGGCTGATCAACTTGAGCACAGCTGTTATGGCAATCTGTAATCTCATTCCACATTGCTACATTTAG

Protein sequence

MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQDIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQKSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKKISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTAVMAICNLIPHCYI

Homology

[Close]

BLAST of Spg039824 vs. NCBI nr
Match: XP_038884917.1 (transcription elongation factor TFIIS [Benincasa hispida])

HSP 1 Score: 437.6 bits (1124), Expect = 8.4e-119
Identity = 240/303 (79.21%), Postives = 256/303 (84.49%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELF+AAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFQAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+KETNKNKKNGN NCK+ PKIGSPSAE VKVEKFQ
Sbjct: 61  HLTKHPKKKIQEYASDLVEMWKEIVIKETNKNKKNGNGNCKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VSKVE FD+NGAT  V++SR ESA+SE+NSVKVEK DS VKVE  VKEE++
Sbjct: 121 KSSSMKVERVSKVEQFDKNGATGSVKYSRLESAVSERNSVKVEKTDSAVKVEGTVKEERR 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISI+KKPSGG  APPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDV+DEVNASDPI
Sbjct: 181 ISIDKKPSGGTAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTA 300

[Close]

BLAST of Spg039824 vs. NCBI nr
Match: KAG6578486.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.3 bits (1118), Expect = 4.2e-118
Identity = 243/303 (80.20%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+KETNKNKKNGN +CKE PKIGSPSAE VKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKETNKNKKNGNIDCKESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VS+VE FDRNG TS  +FSRSES IS KNSVKVEK DSVVKVERIVKEEK+
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRSESDISGKNSVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS G  APPKLTSMIKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST +QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPERLIN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

[Close]

BLAST of Spg039824 vs. NCBI nr
Match: KAG7016050.1 (Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.0 bits (1112), Expect = 2.1e-117
Identity = 242/303 (79.87%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+KETNKNKKNGN +CKE PKIGSPSAE VKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKETNKNKKNGNIDCKESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VS+VE FDRNG TS  +FSR ES IS KNSVKVEK DSVVKVERIVKEEK+
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRLESDISGKNSVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS G  APPKLTSMIKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST +QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPERLIN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

[Close]

BLAST of Spg039824 vs. NCBI nr
Match: XP_022938772.1 (transcription elongation factor TFIIS-like [Cucurbita moschata])

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-116
Identity = 240/303 (79.21%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+K+TNKNKKNGN +C+E PKIGSPSAE VKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKDTNKNKKNGNIDCEESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VS+VE FDRNG TS  +FSRSES IS KN VKVEK DSVVKVERIVKEEK+
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRSESDISGKNPVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS G  APPKLTSMIKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST +QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPERLIN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

[Close]

BLAST of Spg039824 vs. NCBI nr
Match: XP_022957122.1 (transcription elongation factor TFIIS-like [Cucurbita moschata])

HSP 1 Score: 428.7 bits (1101), Expect = 3.9e-116
Identity = 244/303 (80.53%), Postives = 251/303 (82.84%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           ME ELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 DIV+KETNKNKKNGN N KE  KIGSPSAE VKVE  Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VSKVE FDRNG+TS V+FSRS SA+SEKNSVKVEK DSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS GA  PPKLTSMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDPI
Sbjct: 181 ISIEKKPS-GAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+ NLST 
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTT 300

[Close]

BLAST of Spg039824 vs. ExPASy Swiss-Prot
Match: Q9ZVH8 (Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.0e-52
Identity = 143/310 (46.13%), Postives = 177/310 (57.10%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASS-NDGGAEESHCLDALRQLKKFPVTYQILVSTQ----- 60
           ME++L++LFE AKK AD AA       G E S C+DAL+QLKKFPVTY  LV+TQ     
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  -----------------------DIVMKETNKNKK-NGNANCKE----RPKIGSPSAEF- 120
                                   +V++ET K KK  G   CKE    +  +  PS    
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVEKFQKSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVER 180
           VKV+K Q+  S K  KV + E    N   + V+  R    I   N  K++     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 181 IVKEEKKISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDE 240
           + K+ +  S  K P+  A APPKLT+M+K  D  RDKIRELL EA  +V GEAD+   + 
Sbjct: 181 VSKDNQ--SSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERES 240

Query: 241 VNASDPIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER 276
           VNASDP+RVAVSVES+MFE  G ST AQK KYRSIMFNL+D  NPD RR+VL G I PE+
Sbjct: 241 VNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEK 300

[Close]

BLAST of Spg039824 vs. ExPASy Swiss-Prot
Match: Q15560 (Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 177 DAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTEAQKAK 236
           DA R+K RE+L  A      + D D +     +D  R++  +E  +F + G +    K +
Sbjct: 136 DAVRNKCREMLTAAL-----QTDHDHV--AIGADCERLSAQIEECIFRDVGNTDMKYKNR 195

Query: 237 YRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTAVMA 276
            RS + NLKD KNPD RR VL G I P+++  +++  MA
Sbjct: 196 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMA 227

[Close]

BLAST of Spg039824 vs. ExPASy Swiss-Prot
Match: Q92576 (PHD finger protein 3 OS=Homo sapiens OX=9606 GN=PHF3 PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 48/155 (30.97%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 127  SEKNSVKVEKIDSVVKV--ERIVK----EEKKISIEKKPSGGATAPPKLTSMIKSKDAAR 186
            SE+ S K+ K  + V    E+  K    E++++  +K   G     P  ++   S D  R
Sbjct: 869  SEEKSEKIPKESTTVTCTGEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPSADQIR 928

Query: 187  DKIRELLFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTEAQKAKYRSI 246
              +R  L +   K   +++  V +E  A    +VA  +E  +F  +  +    K KYRS+
Sbjct: 929  QSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNKYRSL 988

Query: 247  MFNLKDPKNPDFRRKVLLGLIKPERLINLSTAVMA 276
            MFNLKDPKN    +KVL G + P+ LI +S   +A
Sbjct: 989  MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELA 1019

[Close]

BLAST of Spg039824 vs. ExPASy Swiss-Prot
Match: Q148K0 (Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 71/269 (26.39%), Postives = 110/269 (40.89%), Query Frame = 0


Query: 7   ELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQDIVMKETNKNKK 66
           E+   A+++       S +G       +D LR+LK  PVT  +L ST+  V    N  +K
Sbjct: 7   EIARIARRLDKMVTKKSAEG------AMDLLRELKAMPVTLHLLQSTR--VGMSVNALRK 66

Query: 67  NGNANCKERPKIGSPSAEFVKVEKFQKSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAI 126
                        S   E V + K    S  K+   S  +  +R    S    S  E++ 
Sbjct: 67  Q------------SSDEEVVTLAKSLIKSWKKLLDASDAKARERRRGGSLPTSSSKEASE 126

Query: 127 SEKNSVKVEKIDSVVKVERIVKEEKKISIEKKPSGGATAPPKLTSMIKSKDAARDKIREL 186
           ++  S K  ++  +    RI                 T PP   +     DA R K RE+
Sbjct: 127 AQDPSRKRPELPRMPSTPRI----------------TTFPPVPVTC----DAVRTKCREM 186

Query: 187 LFEAFSKVPGEADEDVIDEVNASDPIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKD 246
           L  A      + D D +     +D   +A  +E  +F + G +    K + RS + NLKD
Sbjct: 187 LTAAL-----QTDHDHV--AIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKD 228

Query: 247 PKNPDFRRKVLLGLIKPERLINLSTAVMA 276
            KNP  RRKVL G I P+++  +++  MA
Sbjct: 247 AKNPGLRRKVLCGAITPQQIAVMTSEEMA 228

[Close]

BLAST of Spg039824 vs. ExPASy Swiss-Prot
Match: Q9BTC0 (Death-inducer obliterator 1 OS=Homo sapiens OX=9606 GN=DIDO1 PE=1 SV=5)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 34/113 (30.09%), Postives = 58/113 (51.33%), Query Frame = 0


Query: 165 APPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI-RVAVSVESVMF 224
           AP +L +M  +      +IR+ +  +  ++  +   D  D +   + + ++A+ +E  MF
Sbjct: 652 APGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMF 711

Query: 225 ENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVL--------LGLIKPERLIN 269
             +  +    K+KYRSIMFNLKDPKN     +VL        L  +KPE L++
Sbjct: 712 NLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVS 764

[Close]

BLAST of Spg039824 vs. ExPASy TrEMBL
Match: A0A6J1FF11 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111444888 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.0e-117
Identity = 240/303 (79.21%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+K+TNKNKKNGN +C+E PKIGSPSAE VKVEKF+
Sbjct: 61  HLTKHPKKKIQNYASDLIEIWKEIVIKDTNKNKKNGNIDCEESPKIGSPSAESVKVEKFR 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VS+VE FDRNG TS  +FSRSES IS KN VKVEK DSVVKVERIVKEEK+
Sbjct: 121 KSSSMKVERVSQVEQFDRNGVTSSAKFSRSESDISGKNPVKVEKTDSVVKVERIVKEEKR 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS G  APPKLTSMIKSKDAARDKIRELLFEAFSKVP EADEDV+DEVNASDPI
Sbjct: 181 ISIEKKPSSGPDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST +QK KYRSIMFNLKDPKNPDFRRKVLLGLIKPERLIN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINMSTA 300

[Close]

BLAST of Spg039824 vs. ExPASy TrEMBL
Match: A0A6J1GYA3 (transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC111458597 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.9e-116
Identity = 244/303 (80.53%), Postives = 251/303 (82.84%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           ME ELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MEKELVELFEAAKKAADAAAARSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 DIV+KETNKNKKNGN N KE  KIGSPSAE VKVE  Q
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENLQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VSKVE FDRNG+TS V+FSRS SA+SEKNSVKVEK DSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFDRNGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS GA  PPKLTSMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDPI
Sbjct: 181 ISIEKKPS-GAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+ NLST 
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTT 300

[Close]

BLAST of Spg039824 vs. ExPASy TrEMBL
Match: A0A6J1BWY6 (transcription elongation factor TFIIS OS=Momordica charantia OX=3673 GN=LOC111006416 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.2e-116
Identity = 240/305 (78.69%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+KETNKNKKNGN NCKE PKIGSPSAE VKVEKFQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKEIVIKETNKNKKNGNGNCKESPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSV--VKVERIVKEE 180
           KSSSMKVE+VSKVE  DRNG TS V++SRSES ISEKN VKVEK DS+  VK ER+VKEE
Sbjct: 121 KSSSMKVERVSKVEQSDRNGTTSSVKYSRSESVISEKNIVKVEKTDSLEKVKAERVVKEE 180

Query: 181 KKISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASD 240
           KKISI+K+PS G  APPKLTSMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASD
Sbjct: 181 KKISIDKRPSSGTAAPPKLTSMIKSKDAARDKIRELLCEAFSKVPGEADEDVIDEVNASD 240

Query: 241 PIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLS 276
           P+RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRR VL+G IKPERLIN+S
Sbjct: 241 PVRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRNVLVGHIKPERLINMS 300

[Close]

BLAST of Spg039824 vs. ExPASy TrEMBL
Match: A0A6J1JLK7 (transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111486982 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 243/303 (80.20%), Postives = 251/303 (82.84%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           ME ELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MEKELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 DIV+KETNKNKKNGN N KE  KIGSPSAE VKVE FQ
Sbjct: 61  HLTKHPKKKIQDYASDLIEMWKDIVIKETNKNKKNGNGNSKEPSKIGSPSAESVKVENFQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VSKVE F+R G+TS V+FSRS SA+SEKNSVKVEK DSVVKVER+VKEEKK
Sbjct: 121 KSSSMKVERVSKVEQFNRIGSTSSVKFSRSASAVSEKNSVKVEKTDSVVKVERMVKEEKK 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
           ISIEKKPS GA  PPKLTSMIKSKDAARDKIRELL EAFSKVPGEADEDVIDEVNASDPI
Sbjct: 181 ISIEKKPS-GAAGPPKLTSMIKSKDAARDKIRELLVEAFSKVPGEADEDVIDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+ NLST 
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMTNLSTT 300

[Close]

BLAST of Spg039824 vs. ExPASy TrEMBL
Match: A0A0A0KDH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.7e-115
Identity = 237/303 (78.22%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASSNDGGAEESHCLDALRQLKKFPVTYQILVSTQ------ 60
           MENELVELFEAAKK AD AAA SNDGGAEES CLDALRQLKKFPVTYQILVSTQ      
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 61  ----------------------DIVMKETNKNKKNGNANCKERPKIGSPSAEFVKVEKFQ 120
                                 +IV+KETNKNKKNGNA+ K+ PKIGSPSAE VKVEKFQ
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120

Query: 121 KSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVERIVKEEKK 180
           KSSSMKVE+VSKVE FDRNGATS V++S+SES +SE+NSVKVEK DS+VKVER+VKE   
Sbjct: 121 KSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKE--- 180

Query: 181 ISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDEVNASDPI 240
              EKKPS GA APPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADE+ +DEVNASDPI
Sbjct: 181 ---EKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPI 240

Query: 241 RVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTA 276
           RVAVSVESVMFENWGGST AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER+IN+STA
Sbjct: 241 RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTA 297

[Close]

BLAST of Spg039824 vs. TAIR 10
Match: AT2G38560.1 (transcript elongation factor IIS )

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-53
Identity = 143/310 (46.13%), Postives = 177/310 (57.10%), Query Frame = 0


Query: 1   MENELVELFEAAKKVADTAAASS-NDGGAEESHCLDALRQLKKFPVTYQILVSTQ----- 60
           ME++L++LFE AKK AD AA       G E S C+DAL+QLKKFPVTY  LV+TQ     
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 61  -----------------------DIVMKETNKNKK-NGNANCKE----RPKIGSPSAEF- 120
                                   +V++ET K KK  G   CKE    +  +  PS    
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAP 120

Query: 121 VKVEKFQKSSSMKVEKVSKVEHFDRNGATSFVEFSRSESAISEKNSVKVEKIDSVVKVER 180
           VKV+K Q+  S K  KV + E    N   + V+  R    I   N  K++     VK E+
Sbjct: 121 VKVQKLQRGDSAKSIKVERKE--PDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEK 180

Query: 181 IVKEEKKISIEKKPSGGATAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDE 240
           + K+ +  S  K P+  A APPKLT+M+K  D  RDKIRELL EA  +V GEAD+   + 
Sbjct: 181 VSKDNQ--SSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERES 240

Query: 241 VNASDPIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPER 276
           VNASDP+RVAVSVES+MFE  G ST AQK KYRSIMFNL+D  NPD RR+VL G I PE+
Sbjct: 241 VNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEK 300

[Close]

BLAST of Spg039824 vs. TAIR 10
Match: AT4G18720.1 (Transcription factor IIS protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-19
Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 167 PKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFEN 226
           P   +M K+ D+ RDK+RE+L  + +KV  E  D ++   V A DP  VAVSVE+ MFEN
Sbjct: 105 PTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFEN 164

Query: 227 WGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTAVM 275
            G     QKAKYRSI+FN+ D  NPD RRKVLLG I  ERL+ +    M
Sbjct: 165 LGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEM 213

[Close]

BLAST of Spg039824 vs. TAIR 10
Match: AT2G42730.1 (F-box family protein )

HSP 1 Score: 89.7 bits (221), Expect = 4.0e-18
Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 167 PKLTSMIKSKDAARDKIRELLFEAFSKVPGE-ADEDVIDEVNASDPIRVAVSVESVMFEN 226
           P  ++M K+ D+ RDK+RE+L  +  KV  E  D ++   V A DP  VAVSVES MFE 
Sbjct: 594 PTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEK 653

Query: 227 WGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINLSTAVM 275
            G      KAKYRSI+FN+ D  NPD RRKVL+G I  ERL+ +    M
Sbjct: 654 LGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEM 702

[Close]

BLAST of Spg039824 vs. TAIR 10
Match: AT5G42325.1 (Transcription factor IIS protein )

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-09
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 167 PKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEDVIDE--VNASDPIRVAVSVESVMFE 226
           P  ++M K+ D+ RDK+ E+L  + +KV  E  +  +    +   DP  VAVSVES M  
Sbjct: 104 PTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM-- 163

Query: 227 NWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINL 270
                         SI+FN+ D  NPD RRKVL+G I  ERL+ +
Sbjct: 164 --------------SILFNMGDSNNPDLRRKVLIGEISGERLVKM 192

[Close]

BLAST of Spg039824 vs. TAIR 10
Match: AT5G25520.1 (SPOC domain / Transcription elongation factor S-II protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 210 DPIRVAVSVESVMFENWGGSTEAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERLINL 269
           DP  +A  +E  +F+ +GG  +  K K RS++FNLKD  NP+ R  V+ G I PERL N+
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418

Query: 270 STAVMA 276
           +   +A
Sbjct: 419 TAEELA 424

The following BLAST results are available for this feature:

BLAST of Spg039824 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884917.1	8.4e-119	79.21	transcription elongation factor TFIIS [Benincasa hispida]	[more]
KAG6578486.1	4.2e-118	80.20	Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7016050.1	2.1e-117	79.87	Transcription elongation factor TFIIS, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022938772.1	1.0e-116	79.21	transcription elongation factor TFIIS-like [Cucurbita moschata]	[more]
XP_022957122.1	3.9e-116	80.53	transcription elongation factor TFIIS-like [Cucurbita moschata]	[more]

BLAST of Spg039824 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVH8	7.0e-52	46.13	Transcription elongation factor TFIIS OS=Arabidopsis thaliana OX=3702 GN=TFIIS P...	[more]
Q15560	1.5e-06	35.35	Transcription elongation factor A protein 2 OS=Homo sapiens OX=9606 GN=TCEA2 PE=...	[more]
Q92576	2.6e-06	30.97	PHD finger protein 3 OS=Homo sapiens OX=9606 GN=PHF3 PE=1 SV=3	[more]
Q148K0	2.9e-05	26.39	Transcription elongation factor A protein 2 OS=Bos taurus OX=9913 GN=TCEA2 PE=2 ...	[more]
Q9BTC0	8.4e-05	30.09	Death-inducer obliterator 1 OS=Homo sapiens OX=9606 GN=DIDO1 PE=1 SV=5	[more]

BLAST of Spg039824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF11	5.0e-117	79.21	transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GYA3	1.9e-116	80.53	transcription elongation factor TFIIS-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1BWY6	3.2e-116	78.69	transcription elongation factor TFIIS OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1JLK7	1.6e-115	80.20	transcription elongation factor TFIIS-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0KDH9	2.7e-115	78.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014610 PE=4 SV=1	[more]

BLAST of Spg039824 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38560.1	5.0e-53	46.13	transcript elongation factor IIS	[more]
AT4G18720.1	2.1e-19	50.46	Transcription factor IIS protein	[more]
AT2G42730.1	4.0e-18	48.62	F-box family protein	[more]
AT5G42325.1	9.9e-09	38.10	Transcription factor IIS protein	[more]
AT5G25520.1	1.3e-08	42.42	SPOC domain / Transcription elongation factor S-II protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003618	Transcription elongation factor S-II, central domain	SMART	SM00510	mid_6	coord: 177..282 e-value: 7.4E-26 score: 101.9
IPR003618	Transcription elongation factor S-II, central domain	PFAM	PF07500	TFIIS_M	coord: 177..275 e-value: 1.6E-23 score: 83.3
IPR003618	Transcription elongation factor S-II, central domain	PROSITE	PS51321	TFIIS_CENTRAL	coord: 179..285 score: 21.637512
IPR035441	TFIIS/LEDGF domain superfamily	GENE3D	1.20.930.10	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 1..78 e-value: 7.3E-6 score: 27.5
IPR036575	Transcription elongation factor S-II, central domain superfamily	GENE3D	1.10.472.30		coord: 160..276 e-value: 1.9E-24 score: 88.0
IPR036575	Transcription elongation factor S-II, central domain superfamily	SUPERFAMILY	46942	Elongation factor TFIIS domain 2	coord: 165..275
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 54..275
None	No IPR available	PANTHER	PTHR11477:SF36	TRANSCRIPTION ELONGATION FACTOR TFIIS	coord: 1..54
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 1..54
None	No IPR available	PANTHER	PTHR11477:SF36	TRANSCRIPTION ELONGATION FACTOR TFIIS	coord: 54..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039824.1	Spg039824.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006414	translational elongation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0008270	zinc ion binding