Spg039690 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039690
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	histone H4
Location	scaffold10: 45597606 .. 45600140 (-)
RNA-Seq Expression	Spg039690
Synteny	Spg039690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTCGTGGAAAAGGAGGTAAGGGTTTGGGAAAGGGAGGAGCGAAGCGTCACAGGAAGGTTTTGAGAGACAACATTCAGGGCATTACGAAGCCTGCAATTCGCCGATTGGCTCGTAGAGGAGGTGTGAAGCGTATCAGTGGATTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTGACTTACACTGAGCATGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCGCTTAAAAGGCAGGGAAGGACCTTGTATGGTTTTGGTGGTTAGGTTGTACATCGATTACTTGGACTGATTCTGGATCTTAGCTTTAGATCTGGCTTCTCTTTACTCTCGCTTATTAGTTTTAGGTTATCTGTAACTTATTCCCTATTGTTCAGATGATGAATATTTTACTTTACTCAAGAATTATATGATAATCTGCCGTGTGGTTTCTTTCCTTAATTTCTCTCGCGTTATCTTTCTTCCTCTGTTCAACGATTTAACAACTAAACCATTCTAAGTGTAAATTGCTTCGTTCAGTAGTTCGCTTTGAGTTTCCTGCCCAATCTTTAATTACGTTCATCGGAAATTCAATTGTATTGGAAAGAAACCTGGCCTAGCGATGAAAAGATGAAGCAAATTTCGAGTGAAAAGTCGCAAGGAAGTGACATTGCAATTCAGTTTTCGTTGGGACTCACTATTTATTGTTATTAAAATTCAAATTTTATAGAAAATTTTGGAATGTGGCTAGTTTTTCTTTTCTGTAACATTTAGTTGAAGACTACCAGTGATGAATTCTATTATTCTCTTCGTTTATCTCGACAAATAGAGGCTATTTTGTGTGGGTTGATTCTGAGAGCTGCATTTGGTTGCTAGGAGGAGCTGATTGGAATAAATGTTTGGTTATTTTGGGGAACAACTAGCAACTTAATGGATTTTAATCTGAAATTTTTGTAAGGGGTTTGATGTGAAGCGAAAAGATGGGAAAGTTTCGTATTGATTGGAGATTATATTCTCTTCAAATAAGTTCAAAATCACAAGAACAATTTTATAAAAAAAAAAAAAAAAATCACAAGAACAATTGACCCAGAAAAAAAGAAAAATCTCAAGAACGAGTGGGTGAAGGTTTACAAGCCGTTGAAGGGGCGAGAGACGTGGTGGGCCGCAGGCCCAACCTATCCAAAGGAACACGAAAACAGGACAGAAACGAGATGAAAATGGGCTGCAAGAAGATGGCCTATCTAAATTTTAAATGTTTAATTTTCTTTTACATTAATTCTTTTTAAATGTACTAGTTATTTGATTAAATTATAAGTCAATCCATCGTGGTAACTTAATGTGTGTTATCATACTCCCTATGATGGTGTTTTGGTATATACTGATGCTACGGTCTCTCCTGGTAGTGACGGTGCAGGTTATGATGTTGTTGTTGGCTTAACCCTCTAGCTGGTCTCAGATTGATTCAACGAATGCAAATTCGAGAGGCTCAAGTACGCTCTTATTCTCTCAATGCCATGCCTCTGATTAACAAGGAAATTGATATGGTTCCTGAGGTTGCACATTGGATTGTGAGTATCCAGGGTATGTGTAAGAGTTTTCAATCCATTTCCTTCCATTATATTTCTAGGAATAGAAATTTGAGAGCTGATGCTTTAGCTTACATTTACATGAATACAATGTTGTGGTTGTCAAATTTCCCACCATGGTTATTGTCCTTGGGTAATGATGCCCATTGCCTATGTATTTTGAATTATGATTGTTTCTAATTAATGAAATCCTTATTTGTGTAAAAAAAAAAATTGAATTTTCAATTGTGTTTGACATACTTGTGATTTTTAAAAGTCAATTAATCATTAGATATAAAATTGAATTTCATGCTTATTGAAACTCTTAAGCTCCGCTTGATAATCATTTGGTTTTTGAAAATTAAGCTTATACACACATACTTCTACTTATAAGTTTCTTTGTTTTAGTATCAATCTTTTTTATTGTTTTAAAAAACCAAGTCCAATTTTGAAAAAAAAAAGTAGTTTTTAAAAACTTGTTTTGTTTTTAGAATTTGGCTAGAAATTCAAATGGATCTTTAACAAAGATGAATGTTATGATAAGGAATTTAGGAGAAAACAAGCATATTTTTCAAAACCAAATGATTATCAAACGAGGCCTTAACTTTCAGTTCTGTGTCTAGTAAGCCTATTAATTTTTAAATAGGCCAGAGATTTATTAGATAGAAAATTGAAAGTTGAGGGATCTATAGACACAAAAGTGGAAGTTTAACTCTTTACACCGAATACATTTTAAAGTTTAGGGACCTACTGGACAAAAAATTTAAAGTTTTAAATTTTAGGGATCAAAATGACACAACTAAACGTTCATAATTAAACTTATAATTGTACTTGTACCGAGCTATTCTCAATTGATAGGAAAACATCATCCATCTTAAACTCAAGAAAATTTCACGAGATTGATAAATGATTGACTTGGACTTTTATAGGAAATGAATTTATTTGA

mRNA sequence

ATGTCAGGTCGTGGAAAAGGAGGTAAGGGTTTGGGAAAGGGAGGAGCGAAGCGTCACAGGAAGGTTTTGAGAGACAACATTCAGGGCATTACGAAGCCTGCAATTCGCCGATTGGCTCGTAGAGGAGGTGTGAAGCGTATCAGTGGATTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTGACTTACACTGAGCATGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCGCTTAAAAGGCAGGGAAGGACCTTATTGATTCAACGAATGCAAATTCGAGAGGCTCAAGTACGCTCTTATTCTCTCAATGCCATGCCTCTGATTAACAAGGAAATTGATATGGTTCCTGAGGTTGCACATTGGATTGTGAGTATCCAGGGAAATGAATTTATTTGA

Coding sequence (CDS)

ATGTCAGGTCGTGGAAAAGGAGGTAAGGGTTTGGGAAAGGGAGGAGCGAAGCGTCACAGGAAGGTTTTGAGAGACAACATTCAGGGCATTACGAAGCCTGCAATTCGCCGATTGGCTCGTAGAGGAGGTGTGAAGCGTATCAGTGGATTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTGATTCGTGATGCTGTGACTTACACTGAGCATGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCGCTTAAAAGGCAGGGAAGGACCTTATTGATTCAACGAATGCAAATTCGAGAGGCTCAAGTACGCTCTTATTCTCTCAATGCCATGCCTCTGATTAACAAGGAAATTGATATGGTTCCTGAGGTTGCACATTGGATTGTGAGTATCCAGGGAAATGAATTTATTTGA

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAMPLINKEIDMVPEVAHWIVSIQGNEFI

Homology

[Close]

BLAST of Spg039690 vs. NCBI nr
Match: RVW49507.1 (Histone H4 [Vitis vinifera])

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45
Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAM 119
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL    ++ R+ +++ Y LN +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGSPVRTRKEELKPYRLNRL 118

[Close]

BLAST of Spg039690 vs. NCBI nr
Match: KVI11808.1 (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-44
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAM 119
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+     I   Q+ SYSL  +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLI--PASIATQQICSYSLQLL 116

[Close]

BLAST of Spg039690 vs. NCBI nr
Match: PWZ12507.1 (putative ATP-dependent helicase C29A10.10c [Zea mays])

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-44
Identity = 100/107 (93.46%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIRE 108
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL++ R  ++E
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLIVIRDYLQE 107

[Close]

BLAST of Spg039690 vs. NCBI nr
Match: KAF4359793.1 (hypothetical protein F8388_008355 [Cannabis sativa])

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-44
Identity = 103/135 (76.30%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAMPL 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL +  ++I    + +Y  N   L
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYVGILEIHSLSI-NYCTN---L 120

Query: 121 INKEIDMVPEVAHWI 136
           +  ++++      W+
Sbjct: 121 VGFQVNVFASQQVWV 131

[Close]

BLAST of Spg039690 vs. NCBI nr
Match: RZC64679.1 (hypothetical protein C5167_008360 [Papaver somniferum])

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44
Identity = 103/112 (91.96%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRS 113
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL     Q R A +RS
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGAQARGANMRS 112

[Close]

BLAST of Spg039690 vs. ExPASy Swiss-Prot
Match: P62785 (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. ExPASy Swiss-Prot
Match: P59259 (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. ExPASy Swiss-Prot
Match: Q6PMI5 (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. ExPASy Swiss-Prot
Match: Q6WZ83 (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. ExPASy Swiss-Prot
Match: Q6LAF3 (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. ExPASy TrEMBL
Match: A0A438EPA5 (Histone H4 OS=Vitis vinifera OX=29760 GN=H4_0 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.7e-46
Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAM 119
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL    ++ R+ +++ Y LN +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGSPVRTRKEELKPYRLNRL 118

[Close]

BLAST of Spg039690 vs. ExPASy TrEMBL
Match: A0A124SI76 (Histone H4 OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009776 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.7e-45
Identity = 104/118 (88.14%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAM 119
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+     I   Q+ SYSL  +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLI--PASIATQQICSYSLQLL 116

[Close]

BLAST of Spg039690 vs. ExPASy TrEMBL
Match: A0A3L6DXC0 (Histone H4 OS=Zea mays OX=4577 GN=SPBC29A10.10c_3 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.5e-45
Identity = 100/107 (93.46%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIRE 108
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL++ R  ++E
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLIVIRDYLQE 107

[Close]

BLAST of Spg039690 vs. ExPASy TrEMBL
Match: A0A6N2LPB8 (Histone H4 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS264625 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.5e-45
Identity = 104/142 (73.24%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAMPL 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL       +      +S N    
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGNNSSKQSRIPHPFSFNLFLR 120

Query: 121 INKEIDMVPEVAHWIVSIQGNE 143
           +  E+         ++ + GNE
Sbjct: 121 VFPEVSRRARANLGVMPVSGNE 142

[Close]

BLAST of Spg039690 vs. ExPASy TrEMBL
Match: A0A7J6EN14 (Histone H4 OS=Cannabis sativa OX=3483 GN=F8388_008355 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.7e-45
Identity = 103/135 (76.30%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLLIQRMQIREAQVRSYSLNAMPL 120
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL +  ++I    + +Y  N   L
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYVGILEIHSLSI-NYCTN---L 120

Query: 121 INKEIDMVPEVAHWI 136
           +  ++++      W+
Sbjct: 121 VGFQVNVFASQQVWV 131

[Close]

BLAST of Spg039690 vs. TAIR 10
Match: AT1G07660.1 (Histone superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. TAIR 10
Match: AT1G07820.1 (Histone superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. TAIR 10
Match: AT1G07820.2 (Histone superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. TAIR 10
Match: AT2G28740.1 (histone H4 )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

[Close]

BLAST of Spg039690 vs. TAIR 10
Match: AT3G45930.1 (Histone superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
          MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 99
          IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Sbjct: 61 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 98

The following BLAST results are available for this feature:

BLAST of Spg039690 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW49507.1	1.4e-45	86.44	Histone H4 [Vitis vinifera]	[more]
KVI11808.1	1.2e-44	88.14	Histone core [Cynara cardunculus var. scolymus]	[more]
PWZ12507.1	1.5e-44	93.46	putative ATP-dependent helicase C29A10.10c [Zea mays]	[more]
KAF4359793.1	2.0e-44	76.30	hypothetical protein F8388_008355 [Cannabis sativa]	[more]
RZC64679.1	2.6e-44	91.96	hypothetical protein C5167_008360 [Papaver somniferum]	[more]

BLAST of Spg039690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62785	1.7e-46	100.00	Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2	[more]
P59259	1.7e-46	100.00	Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2	[more]
Q6PMI5	1.7e-46	100.00	Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3	[more]
Q6WZ83	1.7e-46	100.00	Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3	[more]
Q6LAF3	1.7e-46	100.00	Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3	[more]

BLAST of Spg039690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438EPA5	6.7e-46	86.44	Histone H4 OS=Vitis vinifera OX=29760 GN=H4_0 PE=3 SV=1	[more]
A0A124SI76	5.7e-45	88.14	Histone H4 OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009776 PE=3 SV=1	[more]
A0A3L6DXC0	7.5e-45	93.46	Histone H4 OS=Zea mays OX=4577 GN=SPBC29A10.10c_3 PE=3 SV=1	[more]
A0A6N2LPB8	7.5e-45	73.24	Histone H4 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS264625 PE=3 SV=1	[more]
A0A7J6EN14	9.7e-45	76.30	Histone H4 OS=Cannabis sativa OX=3483 GN=F8388_008355 PE=3 SV=1	[more]

BLAST of Spg039690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07660.1	1.2e-47	100.00	Histone superfamily protein	[more]
AT1G07820.1	1.2e-47	100.00	Histone superfamily protein	[more]
AT1G07820.2	1.2e-47	100.00	Histone superfamily protein	[more]
AT2G28740.1	1.2e-47	100.00	histone H4	[more]
AT3G45930.1	1.2e-47	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 62..76 score: 95.1 coord: 89..100 score: 81.13 coord: 20..39 score: 93.38 coord: 5..16 score: 95.59 coord: 77..89 score: 90.05 coord: 40..60 score: 93.56
IPR001951	Histone H4	SMART	SM00417	h44	coord: 16..90 e-value: 2.0E-29 score: 113.7
IPR001951	Histone H4	CDD	cd00076	H4	coord: 18..98 e-value: 1.98603E-43 score: 136.092
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..101 e-value: 7.0E-55 score: 185.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..99
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 38..97 e-value: 2.2E-8 score: 34.2
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..98
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 1..98
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039690.1	Spg039690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0045842	positive regulation of mitotic metaphase/anaphase transition
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005680	anaphase-promoting complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046982	protein heterodimerization activity