Spg039611 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039611
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	(thale cress) hypothetical protein
Location	scaffold10: 41152666 .. 41153635 (-)
RNA-Seq Expression	Spg039611
Synteny	Spg039611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCCTCCCTTCTCACCCCTTCTTCGAGATCCCATCGCCCGAAATTTTTCCTCCCCAGCCTCCTCGTTTCAATCGAAATTCCCTTCAAAAACCCATTTCTTCAAATGTTGGTTTGTCCCAGATCCTCTATACTCCCAAGCTCAGTGTTGGAAATTCTTCTTTAGCTACTAAATTGAATGGCTATCACTTTGTCTCTAGGTTTAGATTCTTCTCTGTAAAGACTCCGGGTTTTGGGGGCCAAATCAATGGAAATTTTGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCACATTTTCGAGGTATCGGGAAGCCATAGGGTTGCAAATTGAGGCTTTCTTCAGAAGAAACTATCTAGCTCTACTGGGGTTTGGAGCAACTCTTGTTTGTGCATTGCTCTGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTCTCTGAAGGCATGGCCAAGTATGGATTTCTTGCTTTATCTTCAGCTATCGTTGCTTTTGCTGTGAGTTTTCTCTTTTATCTCTTCGCCCTGTGTTACCTTCATTTTGTAAGAGAAAGGATTTATCTCTTCGCCCCTTCCCATGCCGGAGACGGAGGGAGGGAGCCTCCCTCCCCGTTCTCTGTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTAATTTAAAAAAAAAAACAGTGGAAAGAGGGGAGGAAGAAGAAAAAGAGAAGAAAAAAAAATCAGTCGCCGACGGCCGGCGGCGAGCGGTGGCCGCCGGCCGCCGGAGATAGGAAGAAGAAGAAGGATGAAGAGGATGAAGAGGAAGAAGATGGAGAAGAAGAAGAGAGAGAGGGAGAAATAATAAATAATAATAATAATATTTTATTATTTTAATAATTTTCATTTAAAAAAATTTAAAAATAAATTTTTTTTATTAAAATAATAGTGCCTCGTCATCAACCGTTAAAATTTAACAGAAAAGTTGA

mRNA sequence

ATGGCCGCCCTCCCTTCTCACCCCTTCTTCGAGATCCCATCGCCCGAAATTTTTCCTCCCCAGCCTCCTCGTTTCAATCGAAATTCCCTTCAAAAACCCATTTCTTCAAATGTTGGTTTGTCCCAGATCCTCTATACTCCCAAGCTCAGTGTTGGAAATTCTTCTTTAGCTACTAAATTGAATGGCTATCACTTTGTCTCTAGGTTTAGATTCTTCTCTGTAAAGACTCCGGGTTTTGGGGGCCAAATCAATGGAAATTTTGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCACATTTTCGAGGTATCGGGAAGCCATAGGGTTGCAAATTGAGGCTTTCTTCAGAAGAAACTATCTAGCTCTACTGGGGTTTGGAGCAACTCTTGTTTGTGCATTGCTCTGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTCTCTGAAGGCATGGCCAAGTATGGATTTCTTGCTTTATCTTCAGCTATCGTTGCTTTTGCTAAAAGTTGA

Coding sequence (CDS)

ATGGCCGCCCTCCCTTCTCACCCCTTCTTCGAGATCCCATCGCCCGAAATTTTTCCTCCCCAGCCTCCTCGTTTCAATCGAAATTCCCTTCAAAAACCCATTTCTTCAAATGTTGGTTTGTCCCAGATCCTCTATACTCCCAAGCTCAGTGTTGGAAATTCTTCTTTAGCTACTAAATTGAATGGCTATCACTTTGTCTCTAGGTTTAGATTCTTCTCTGTAAAGACTCCGGGTTTTGGGGGCCAAATCAATGGAAATTTTGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCACATTTTCGAGGTATCGGGAAGCCATAGGGTTGCAAATTGAGGCTTTCTTCAGAAGAAACTATCTAGCTCTACTGGGGTTTGGAGCAACTCTTGTTTGTGCATTGCTCTGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTCTCTGAAGGCATGGCCAAGTATGGATTTCTTGCTTTATCTTCAGCTATCGTTGCTTTTGCTAAAAGTTGA

Protein sequence

MAALPSHPFFEIPSPEIFPPQPPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAKS

Homology

[Close]

BLAST of Spg039611 vs. NCBI nr
Match: XP_023551594.1 (uncharacterized protein LOC111809375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61
Identity = 126/147 (85.71%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F+ +S Q   SSN GLSQILYTPK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 48  FSSSSFQSKFSSNPGLSQILYTPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 107

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFG+
Sbjct: 108 GNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGV 167

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVGLSEGMAKYGFLALSSAIVAFA
Sbjct: 168 ANTFVGLSEGMAKYGFLALSSAIVAFA 194

[Close]

BLAST of Spg039611 vs. NCBI nr
Match: XP_022993023.1 (uncharacterized protein LOC111489167 [Cucurbita maxima])

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F+ +S Q   SSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 48  FSSSSFQSKFSSNPGLSQILYAPKVAAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 107

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKP AAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFG+
Sbjct: 108 GNFAKKVLDKPTAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGV 167

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVGLSEGMAKYGFLALSSAIVAFA
Sbjct: 168 ANTFVGLSEGMAKYGFLALSSAIVAFA 194

[Close]

BLAST of Spg039611 vs. NCBI nr
Match: KAG7016058.1 (hypothetical protein SDJN02_21162 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 125/147 (85.03%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 129 FQSKFSSNPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 188

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFGI
Sbjct: 189 GNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGI 248

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVG+SEGMAKYGFLALSSAIVAFA
Sbjct: 249 ANTFVGISEGMAKYGFLALSSAIVAFA 275

[Close]

BLAST of Spg039611 vs. NCBI nr
Match: XP_022938904.1 (uncharacterized protein LOC111444978 [Cucurbita moschata] >KAG6578493.1 hypothetical protein SDJN03_22941, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 125/147 (85.03%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 53  FQSKFSSNPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 112

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFGI
Sbjct: 113 GNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGI 172

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVG+SEGMAKYGFLALSSAIVAFA
Sbjct: 173 ANTFVGISEGMAKYGFLALSSAIVAFA 199

[Close]

BLAST of Spg039611 vs. NCBI nr
Match: XP_004141508.1 (uncharacterized protein LOC101215996 [Cucumis sativus] >KGN52588.1 hypothetical protein Csa_009165 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 3.5e-59
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 23  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQ 82
           P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +H  SRFRFFSVK P FGGQ
Sbjct: 51  PSFQSKFPSKPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQ 110

Query: 83  INGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMF 142
           INGNFAKKV+DKPAAAVSS FSRYREAIGLQIEAFF+RNYL LLGF A L+CALLW+IMF
Sbjct: 111 INGNFAKKVIDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMF 170

Query: 143 GIANTFVGLSEGMAKYGFLALSSAIVAF 171
           GIANTFVGLSEGMAKYGFLALSSAIVAF
Sbjct: 171 GIANTFVGLSEGMAKYGFLALSSAIVAF 198

[Close]

BLAST of Spg039611 vs. ExPASy TrEMBL
Match: A0A6J1K0Y8 (uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F+ +S Q   SSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 48  FSSSSFQSKFSSNPGLSQILYAPKVAAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 107

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKP AAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFG+
Sbjct: 108 GNFAKKVLDKPTAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGV 167

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVGLSEGMAKYGFLALSSAIVAFA
Sbjct: 168 ANTFVGLSEGMAKYGFLALSSAIVAFA 194

[Close]

BLAST of Spg039611 vs. ExPASy TrEMBL
Match: A0A6J1FFG8 (uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC111444978 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 125/147 (85.03%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 25  FNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQIN 84
           F       PISSN GLSQILY PK++ GNSS+ATKLN Y   SRFRFFSVKTPGFGGQIN
Sbjct: 53  FQSKFSSNPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRFFSVKTPGFGGQIN 112

Query: 85  GNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMFGI 144
           GNFAKKVLDKPAAAV S FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIMFGI
Sbjct: 113 GNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCALLWRIMFGI 172

Query: 145 ANTFVGLSEGMAKYGFLALSSAIVAFA 172
           ANTFVG+SEGMAKYGFLALSSAIVAFA
Sbjct: 173 ANTFVGISEGMAKYGFLALSSAIVAFA 199

[Close]

BLAST of Spg039611 vs. ExPASy TrEMBL
Match: A0A0A0KSP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G645130 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.7e-59
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 23  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQ 82
           P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +H  SRFRFFSVK P FGGQ
Sbjct: 51  PSFQSKFPSKPISSNVGLSQFLYSPKLTAGNSSLVTKLNAHHSASRFRFFSVKIPRFGGQ 110

Query: 83  INGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMF 142
           INGNFAKKV+DKPAAAVSS FSRYREAIGLQIEAFF+RNYL LLGF A L+CALLW+IMF
Sbjct: 111 INGNFAKKVIDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFAAALICALLWKIMF 170

Query: 143 GIANTFVGLSEGMAKYGFLALSSAIVAF 171
           GIANTFVGLSEGMAKYGFLALSSAIVAF
Sbjct: 171 GIANTFVGLSEGMAKYGFLALSSAIVAF 198

[Close]

BLAST of Spg039611 vs. ExPASy TrEMBL
Match: A0A6J1H883 (uncharacterized protein LOC111461024 OS=Cucurbita moschata OX=3662 GN=LOC111461024 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.9e-59
Identity = 125/150 (83.33%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 22  PPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGG 81
           P +F  N    PISSN+GLSQILYTPKL  GNSSLAT  N +   SRFR FS KTPGFGG
Sbjct: 59  PSKFPSN----PISSNLGLSQILYTPKLPAGNSSLATNFNAFRSASRFRLFSAKTPGFGG 118

Query: 82  QINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIM 141
           QINGNFAKKVLDKPAAAVSS FSRYREAIGLQIEAFFRRNYL LLGFGA LVCALLWRIM
Sbjct: 119 QINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFRRNYLVLLGFGAVLVCALLWRIM 178

Query: 142 FGIANTFVGLSEGMAKYGFLALSSAIVAFA 172
           FGIANTF+G SEGMAKYGFLALSSAIVAFA
Sbjct: 179 FGIANTFIGFSEGMAKYGFLALSSAIVAFA 204

[Close]

BLAST of Spg039611 vs. ExPASy TrEMBL
Match: A0A5D3BP90 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001650 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.7e-59
Identity = 122/148 (82.43%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 23  PRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKLNGYHFVSRFRFFSVKTPGFGGQ 82
           P F      KPISSNVGLSQ LY+PKL+ GNSSL TKLN +   SRFRFFSVK P FGGQ
Sbjct: 302 PSFQSKFPSKPISSNVGLSQFLYSPKLTAGNSSLVTKLNVHRSASRFRFFSVKIPRFGGQ 361

Query: 83  INGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFGATLVCALLWRIMF 142
           INGNFAKKV+DKPAAAVSS FSRYREA+GLQIEAFF+RNYL LLGFGA L+CALLWRIMF
Sbjct: 362 INGNFAKKVIDKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMF 421

Query: 143 GIANTFVGLSEGMAKYGFLALSSAIVAF 171
           GIANTFVGLSEGMAKYGFLALSSAIVAF
Sbjct: 422 GIANTFVGLSEGMAKYGFLALSSAIVAF 449

[Close]

BLAST of Spg039611 vs. TAIR 10
Match: AT3G56430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in 196 species: Archae - 12; Bacteria - 170; Metazoa - 996; Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes - 1428 (source: NCBI BLink). )

HSP 1 Score: 157.9 bits (398), Expect = 7.3e-39
Identity = 92/164 (56.10%), Postives = 115/164 (70.12%), Query Frame = 0


Query: 12  IPSPEIFPPQPPRFNRNSLQKPISSNVGLSQILYTPKLSVGNSSLATKL----NGYHFVS 71
           +PS  +   QP     + L +P S NVGLSQIL +PKL  G  +    L       +FVS
Sbjct: 72  LPSNGVSQLQPKTSFHSFLSRPTSKNVGLSQILPSPKLVPGLQNCGVALVKPRVNMNFVS 131

Query: 72  RFRFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLG 131
            FR FS  + GF  +++GNFA+KV+DKP  AVSSTF+RYR A+GL ++AF+++N L + G
Sbjct: 132 AFRLFS--SSGF-RKVDGNFARKVVDKPIKAVSSTFARYRMALGLHVDAFWKKNNLLVFG 191

Query: 132 FGATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA 172
            GA  VC  LWR+MFGIA+TFVGLSEGMAKYGFLALSSAIVAFA
Sbjct: 192 AGAVFVCIFLWRVMFGIASTFVGLSEGMAKYGFLALSSAIVAFA 232

[Close]

BLAST of Spg039611 vs. TAIR 10
Match: AT2G40800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 156.0 bits (393), Expect = 2.8e-38
Identity = 93/162 (57.41%), Postives = 115/162 (70.99%), Query Frame = 0


Query: 12  IPSPEIFPPQPPRFNRNSL-QKPISSNVGLSQILYTPKLSVG-NSSLATKLNGYHFVSRF 71
           IPS  +   Q P+F+ +SL  KP S NVGL QIL +PKL+     +L        F S F
Sbjct: 39  IPSNGVSQLQ-PKFSFHSLSSKPTSKNVGLYQILSSPKLNPKLQQALGLPRVNVSFASAF 98

Query: 72  RFFSVKTPGFGGQINGNFAKKVLDKPAAAVSSTFSRYREAIGLQIEAFFRRNYLALLGFG 131
           R  S K+ GF  +++G+FA+KV+DKP  AVSSTF+RYREAIGL I+AF+++N L + G  
Sbjct: 99  RLVSTKSSGF-RKVDGSFARKVVDKPVKAVSSTFARYREAIGLHIDAFWKKNSLVVFGAA 158

Query: 132 ATLVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFA 172
              VC  LWRIMFGIA+TFVGLSEGMAKYGFLALSSAIVAF+
Sbjct: 159 GVFVCIFLWRIMFGIASTFVGLSEGMAKYGFLALSSAIVAFS 198

The following BLAST results are available for this feature:

BLAST of Spg039611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551594.1	2.8e-61	85.71	uncharacterized protein LOC111809375 [Cucurbita pepo subsp. pepo]	[more]
XP_022993023.1	3.1e-60	84.35	uncharacterized protein LOC111489167 [Cucurbita maxima]	[more]
KAG7016058.1	3.1e-60	85.03	hypothetical protein SDJN02_21162 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938904.1	3.1e-60	85.03	uncharacterized protein LOC111444978 [Cucurbita moschata] >KAG6578493.1 hypothet...	[more]
XP_004141508.1	3.5e-59	82.43	uncharacterized protein LOC101215996 [Cucumis sativus] >KGN52588.1 hypothetical ...	[more]

BLAST of Spg039611 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg039611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K0Y8	1.5e-60	84.35	uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167...	[more]
A0A6J1FFG8	1.5e-60	85.03	uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A0A0KSP6	1.7e-59	82.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G645130 PE=4 SV=1	[more]
A0A6J1H883	2.9e-59	83.33	uncharacterized protein LOC111461024 OS=Cucurbita moschata OX=3662 GN=LOC1114610...	[more]
A0A5D3BP90	3.7e-59	82.43	60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Spg039611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56430.1	7.3e-39	56.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G40800.1	2.8e-38	57.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36354	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 30..171
None	No IPR available	PANTHER	PTHR36354:SF2	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 30..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039611.1	Spg039611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome