Spg039565 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039565
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA replication complex GINS protein PSF3-like
Location	scaffold10: 45866437 .. 45869718 (-)
RNA-Seq Expression	Spg039565
Synteny	Spg039565

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATTCATCACTTTCCCCTGAAAATTTGATTCAATCAATGTTTTGAAAGCCGGGGCCTCTGTCTCCTTCGTCAACCTCGCTTCCTTTTCTCGACTGCAAATTCACCATTTCGAACTCTTCTTTCTCATCCCAAATCATCGCCAATTCGCAATTGGTTGAATTATTATTTATTCAATGGCTTTTACTTTGTTCTTGATTGTTTTTGTATTTCGTCTCATTTTCCTTTTTGTATGCAAGTGCGTTATTTGGTGTTGTTTGTGTATCTTTGTATGTATCTATTCTCAGAAGTTCGTATTATGTTTCAATTTTTCATTTTAGTGGCTAGATGCAAAAGCTGTTGACAATTTTCTATTGATGCAATTAAGTTAGAATTTACTCATCTGTTGATTGGAAAACTGAAAAAAAATGGTTTACTTAGTATTCCCAACGAGAAGTGAATCTGAATTTGTAATTTGGATGTGACATTTGAAAGATTTGAAGATCTCTGCATAATTTACATTGAACTGTTGAATTTTTTTTGTACTTTACTGTCTAGTTTAACAATATGTTTTCATTTTTTTTAATATCAGAGAAAATATTCTTGATTTCCTCAGTATTTTGACTGTTGTAACTGTCATTACATTTCAGGCAGTTCCAGTAAACATTTTACAGTAGAAGTGGATGGTGCCAGTTGAAAATATATCATGCTGGAAGTTGAGTAATTTCTTCTAGAGGCATTGAACATTGGAGCAAAGTGTTGAATAGCCTCAGAAATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGGTCAATATCTTATTCTTTTACCTGATAAGGTCTTATAAACTTGCAATCTCAATATTGAGTCTTTTTTTCCCCTCTTGACAGCTTGTCTCGGTTTTGTTCCAAAAGGCAGTTAACGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTGAGTTCCAGGGATTAGTAGGAGATACGTTATGGATGTTGAATGACAAACTTATGTTTTATTATTTGGTTTAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGCAAGAGTTACATCATAGACAAGTGGCGGTTATGGGCTTACCTGCCTGTTTTAACCAAAGGTAGCAATAGCCATTACATTCAGGCTCTGCATACGACCAATAATTTCGATAAACTTGCTGTGTTCTAGCTTCTTTGGGAGCTTAAGAGAATGAGGATCTCATTTACTATGCCCTCATTTACTCCCTAAAATCTGACCCGGAAAGACACTGAGTTCTGATTCTTTTTCCTCTAATTTTGTGAATGTAATTCATGCATGATTGCCTTAATTTTTTTTTTCATCTGCTAATTATTTTACGAGCAGAAACTTCTGAACTGGACTCCCAAGAGTACAGGAATTAGTAAGATTTAATGAGGTCATTTTAAATTTATTGATGTTATATTTTTAGTTTAAGAACTTTTCTTCTCGGTTGCTCATGAACTACATCGGTGACAAGTGATGTTAATTGCATCACCTTCCAGTTTCATTCAATTAAAACAAAAGTAATGGTTATTACTCCTGGTTACTGTGCCTGACCTATCATCGCCATGAAATTGTAGTATTCCTAACCTTTTGAGATTTAGTTTATAGAATCTCATTTAGAATGCTCGCACTTGCTCCATAGAAGCTGACCCAAAAGAAAATGATTGTTTTTGTTTTTTTTGGTGTATTATTCCGGACCTTTCTGTGGCTCAATTCTTATTAAAAAAATGATAATATTTATAGTTGACTAGTGCTCTTGTTCTCTAACCAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATATTTCTATGAATTTGGATGCAAGATTGCACCACTGTGAGTATTTTGAGATCCAACTCTTTACATTTATCAGTTGTTTTTTGTAATTTTTTTTTTATTTTAAATATCCATGAGAGTTTGGGTCAGCTTGGATGACTCTATTGGATTTGGTTGTCAAGGTAATTCATAGAATATTAAATCCTAGATAGGTGATCACCATGGATTTATCATAATTCTTTTACAAGTGAAAAACGTATGGTAGTGCACTTTCATTTGAAATACATTTGTACTCAAATAAGCATAGCTTGTTTTCACCTTTGACAAAAGTACCATTCTGAAGGCATGACATTTAACAGATCCTTCTTTAAACGTAATAATTAGATATCTAGCAATAAGACTACTTTTCTACTGCCGTCTAACTGACATATGAAATGTTCAATTTAAGCTTTCGGTTGGACATCCTACTAAGGACTAAGGATCTTGTATTTAGGCTTGAACTCATGGCAGTATTTTATAATAATCTGGCCAGCATGTTGTCATCTAAAGTTCTGCATCGCAATGAATAGCAATCTCATTTTTATTCCATTGTAGATGTAGACTGATAAACAAACATGCATAAAGATTTTAAACTGACTAGCTAACCCCTTCTACACATGGAGTATATCTTGTAAAAAGTGCTTGTTGCCTTGATCTTGTGCATGTAGAATGCCTGTTTGTTGGAGTGTGCTCTACCAAATCGCTGTTAGTAATATTTGTCAAATGTACCTAAATTCGCAATAGATTGAATTCCATATCTCATTTTTCTTCCACAAATTTCAACGACAGGATTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAGGTGCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACACTTCTATCAAAAGAAGAAATCAAAAGTGAGATTTTTGTTACATGTTTCATCTGTCTCTTGTTTTCATATTTCGTGCTGCTTCTCTTCCAACTCACATCAATATAATCCTTGTGTACAGTGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGATAGCATCCTTTCTTGGAAGGAAGAGGAAGTCATCTGAGTAGGCACTTAACTTATTCGAGCTTAAATGTATTCTATTTTGACCCTTAGTTGCATAAGCATAGAATATAGTGTAGAAGTCTGCATATGCCCCTTCCTAAAAAAGTAGTAATTTATTCATATTTTTTTTTTAAAAAATATTTCATGATTGCCATTTCAATGTCTCAATCTTTATATTTTTTTTCCAATATGTGGGGATGAGGGATTCGAACTACAGCGATCATAGTACAAGCCTTGTGTCAGTTGAGCTATCCTCATGTTGGCATTTCAATGTCTCATCTT

mRNA sequence

ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCGGTTTTGTTCCAAAAGGCAGTTAACGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGCAAGAGTTACATCATAGACAAGTGGCGGTTATGGGCTTACCTGCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATATTTCTATGAATTTGGATGCAAGATTGCACCACTGATTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAGGTGCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACACTTCTATCAAAAGAAGAAATCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGATAGCATCCTTTCTTGGAAGGAAGAGGAAGTCATCTGAGTAG

Coding sequence (CDS)

ATGACAAATTATTATGATATTGATGACATTCTGGCGGAGGAAGAGCTTGTCTCGGTTTTGTTCCAAAAGGCAGTTAACGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCGCAAGAGTTACATCATAGACAAGTGGCGGTTATGGGCTTACCTGCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGTCAATATTTCTATGAATTTGGATGCAAGATTGCACCACTGATTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAGGTGCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATACTTGACACTTCTATCAAAAGAAGAAATCAAAATGTATGAGGCAGCTCAATCCTCTATGACAGCCTTTAAGAAATGGCGAATGGGTGGGCCTAGATTTCAGATAGCATCCTTTCTTGGAAGGAAGAGGAAGTCATCTGAGTAG

Protein sequence

MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRKRKSSE

Homology

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BLAST of Spg039565 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELH RQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEE KMYEAAQSSMTAFKKWR+GGPRFQ ASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

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BLAST of Spg039565 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.2 bits (892), Expect = 4.3e-92
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MTNYYDIDDILA+EELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELH RQV
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEE KMYEAAQSSMTAFKKWR+GGPRFQ ASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

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BLAST of Spg039565 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 4.3e-92
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELH RQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEE KMYEAAQSSMTAFKKWR+GGPRFQ ASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

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BLAST of Spg039565 vs. NCBI nr
Match: XP_008441464.1 (PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008441465.1 PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo])

HSP 1 Score: 344.4 bits (882), Expect = 6.3e-91
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELH RQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEE KMYEAAQSSMTAFKKWRMGGPRFQ ASFL RK
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

[Close]

BLAST of Spg039565 vs. NCBI nr
Match: KAA0055042.1 (DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa] >TYK24435.1 DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa])

HSP 1 Score: 344.4 bits (882), Expect = 6.3e-91
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELH RQV
Sbjct: 23  MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 82

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 83  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 142

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEE KMYEAAQSSMTAFKKWRMGGPRFQ ASFL RK
Sbjct: 143 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 202

Query: 181 RKSSE 186
           RKS+E
Sbjct: 203 RKSTE 207

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BLAST of Spg039565 vs. ExPASy Swiss-Prot
Match: Q0UPV4 (DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PSF3 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFW------LAQE 60
           M++YY +D IL + + V   F+  V G+G    + +  ++ GSKVELP W      L+Q 
Sbjct: 1   MSSYYSVDAILTDAQKVPCTFELTVPGLGFLEGNMSGDMKQGSKVELPLWLGEMLALSQS 60

Query: 61  LHHRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLL 120
           L+   +  +  P+  + R    ++AD   VDLR+   +FY+ G +I  L  +  +   L 
Sbjct: 61  LNTSSLVTLDPPSALSPRVLNALKADPRTVDLRALAPHFYDLGARILELFEEEKMIEVLS 120

Query: 121 STFKSRYKEVLTKAHT--AVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKW 165
            TFK+R   +  +AH         + ++  L + E +++ AA  S  A + W
Sbjct: 121 DTFKARAAVIADQAHNPRGALGEGADFMRGLDENERQLFRAAHDSAKAARTW 172

[Close]

BLAST of Spg039565 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 54/191 (28.27%), Postives = 92/191 (48.17%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVLFQKAVNGVG-IDPSSETDSVESGSKVELPFWLAQELH--HRQ 62
           N+  ++D+L  +E +    +     +G +D   ++DS+  GSK+ELP WLA+ L+   R+
Sbjct: 17  NFLSLEDLLMSQEKLPCCIESGFPRLGFLDKGGDSDSIPEGSKMELPLWLAKGLYDNKRR 76

Query: 63  VAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRT--IGSWLLSTF 122
           V  + LP  + +  R    ADA  VDL     ++Y FG ++          I   +L TF
Sbjct: 77  VLSVELPKIYREGWRTVFSADANVVDLHKMGPHYYGFGSQLLNFDSPENPEIAKTILQTF 136

Query: 123 KSRYKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFL 182
             R++ ++  +  A    +S  +  L + E  ++ A Q  + AF+ W  G      AS L
Sbjct: 137 VGRFRRIMDSSQNAYNEDTSGLVARLDELERSLFRAGQRGLNAFQSWERGKAAQITASNL 196

Query: 183 ---GRKRKSSE 186
               +KRK +E
Sbjct: 197 VQNYKKRKFNE 207

[Close]

BLAST of Spg039565 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 8.4e-14
Identity = 44/170 (25.88%), Postives = 82/170 (48.24%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWL------AQELH 62
           +YYD+D IL + + +   F+  V G+GI   +  + +++G++++LP WL         L 
Sbjct: 2   SYYDVDSILTDSQKLPCTFELEVPGLGILEGNPGEDIKAGTRIDLPLWLGVMLSIGARLG 61

Query: 63  HRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLST 122
             ++  + LP+  + R    ++AD   VDLRS   +FY    ++  L  +  +   L++T
Sbjct: 62  TSRLVTLDLPSALSDRVVNALKADPRTVDLRSLAPHFYSLSERVLDLFEEEEMVDVLINT 121

Query: 123 FKSRYKEVLTKAHT--AVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKW 165
           FK R  E+   AH         + +L  L + E +++  A  S    + W
Sbjct: 122 FKKRAAEIADHAHNPKGALGEGADFLRGLDETERQLFRVAHDSARETRIW 171

[Close]

BLAST of Spg039565 vs. ExPASy Swiss-Prot
Match: Q9UTC3 (DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psf3 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQVAV 62
           +YYDID IL+E + V      ++ G+G     E   V +GSKVELPFWLA+ L       
Sbjct: 2   DYYDIDSILSENQKVPCTSTVSIPGLG----HEGRMVPTGSKVELPFWLAEVLAINSFVS 61

Query: 63  MGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 121
           + +PA F+   R  ++A+   V +R    ++Y F  K+  LI D ++    L+T +SR
Sbjct: 62  IHMPAPFSSVVRNALKANPNSVSIRDITTHYYHFAEKMLHLISDDSLVQISLNTLRSR 115

[Close]

BLAST of Spg039565 vs. ExPASy Swiss-Prot
Match: Q54EH6 (Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum OX=44689 GN=gins3 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-11
Identity = 42/163 (25.77%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 3   NYYDIDDILAEEELVSV-LFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQVA 62
           +Y+DI+DILAEE+ ++   F  A N   ++  S    ++ GSKV+LP+W+A  L      
Sbjct: 2   SYFDINDILAEEQKITCNFFYDAYNLGQLEEGSRDPDMKKGSKVDLPYWMALALAKSNFV 61

Query: 63  VMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSRY 122
            + +P  +    + ++ AD   + +R    Y+ + G +++   GDR +   L   F+ R+
Sbjct: 62  SVIMPPEYQDEYKNKLIADPNVISMR-LFPYYDKIGVQLSDFFGDRKLKLLLFRVFRERF 121

Query: 123 KEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKW 165
             + +++        SK L  L+ +E +++     S   + KW
Sbjct: 122 LNIYSQSINLKETDISKILGNLTYQEREVFSNGYKSSNDYDKW 163

[Close]

BLAST of Spg039565 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.4e-93
Identity = 176/185 (95.14%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELH RQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEE KMYEAAQSSMTAFKKWR+GGPRFQ ASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Spg039565 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MTNYYDIDDILAEEELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELH RQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSR QYFYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEE KMYEAAQSSMTAFKKWR+GGPRFQ ASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 186
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Spg039565 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-91
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELH RQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEE KMYEAAQSSMTAFKKWRMGGPRFQ ASFL RK
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 186
           RKS+E
Sbjct: 181 RKSTE 185

[Close]

BLAST of Spg039565 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-91
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELH RQV
Sbjct: 23  MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 82

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPL+GDRTIGSWLLSTFKSR
Sbjct: 83  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 142

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEE KMYEAAQSSMTAFKKWRMGGPRFQ ASFL RK
Sbjct: 143 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 202

Query: 181 RKSSE 186
           RKS+E
Sbjct: 203 RKSTE 207

[Close]

BLAST of Spg039565 vs. ExPASy TrEMBL
Match: A0A0A0K8J6 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 171/185 (92.43%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           MT+YYDIDDILAEEELVSV+FQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELH RQV
Sbjct: 5   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 64

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSRCQ+FYEFGCKIAPL+GDRTIGSWLLST KSR
Sbjct: 65  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSR 124

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEE KMYEAAQSSMTAFKKWRMGGPRFQ ASFL RK
Sbjct: 125 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 184

Query: 181 RKSSE 186
           RKS+E
Sbjct: 185 RKSTE 189

[Close]

BLAST of Spg039565 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.5e-69
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           M  Y+DIDDIL EEE V VLF K  NGV IDPS+ET+  E GSKVELPFWLA ELH RQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PL+ DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEE  +YEAA  SMTAFKKWR GGPRFQ AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Spg039565 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.5e-69
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           M  Y+DIDDIL EEE V VLF K  NGV IDPS+ET+  E GSKVELPFWLA ELH RQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PL+ DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEE  +YEAA  SMTAFKKWR GGPRFQ AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Spg039565 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.5e-69
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   MTNYYDIDDILAEEELVSVLFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHHRQV 60
           M  Y+DIDDIL EEE V VLF K  NGV IDPS+ET+  E GSKVELPFWLA ELH RQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRCQYFYEFGCKIAPLIGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSRC YFYEFGCKI PL+ DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEEIKMYEAAQSSMTAFKKWRMGGPRFQIASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEE  +YEAA  SMTAFKKWR GGPRFQ AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

The following BLAST results are available for this feature:

BLAST of Spg039565 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962205.1	2.0e-92	95.14	DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_02296221...	[more]
KAG6602618.1	4.3e-92	94.59	hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990174.1	4.3e-92	94.59	DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175....	[more]
XP_008441464.1	6.3e-91	92.97	PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis melo] >XP_008...	[more]
KAA0055042.1	6.3e-91	92.97	DNA replication complex GINS protein PSF3-like [Cucumis melo var. makuwa] >TYK24...	[more]

BLAST of Spg039565 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0UPV4	1.2e-15	28.49	DNA replication complex GINS protein PSF3 OS=Phaeosphaeria nodorum (strain SN15 ...	[more]
Q7ZT01	1.3e-14	28.27	DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=...	[more]
Q4WQ54	8.4e-14	25.88	DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC M...	[more]
Q9UTC3	1.0e-11	35.59	DNA replication complex GINS protein psf3 OS=Schizosaccharomyces pombe (strain 9...	[more]
Q54EH6	3.9e-11	25.77	Probable DNA replication complex GINS protein PSF3 OS=Dictyostelium discoideum O...	[more]

BLAST of Spg039565 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEE0	9.4e-93	95.14	DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JM79	2.1e-92	94.59	DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3B3H3	3.0e-91	92.97	DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UGU7	3.0e-91	92.97	DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0K8J6	1.5e-90	92.43	Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011640 PE=3 S...	[more]

BLAST of Spg039565 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19080.1	5.5e-69	68.48	GINS complex protein	[more]
AT1G19080.2	5.5e-69	68.48	GINS complex protein	[more]
AT3G55490.1	5.5e-69	68.48	GINS complex protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 45..148 e-value: 6.5E-10 score: 39.4
IPR038437	GINS complex, subunit Psf3 superfamily	GENE3D	1.20.58.2050		coord: 1..167 e-value: 1.5E-50 score: 173.3
IPR010492	GINS complex, subunit Psf3	PANTHER	PTHR22768	UNCHARACTERIZED	coord: 1..184
None	No IPR available	CDD	cd11713	GINS_A_psf3	coord: 65..167 e-value: 4.19865E-30 score: 104.655
None	No IPR available	SUPERFAMILY	160059	PriA/YqbF domain	coord: 1..66
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 65..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039565.1	Spg039565.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902975	mitotic DNA replication initiation
cellular_component	GO:0000811	GINS complex