
Spg039493 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGCGGTTTCGTAATCAGAGCCACCCGAAGCACGAACTGGAGCTGAAGAAGTACCTGAAACCTTACACCTGCGATGGCTGCAAGGAAATAGGCTTTGGGCCACGATACCGATTCGAAAAGTGCGATTTTGATCTTCACAAAGCCTGTATGTTTCCACAAATCTCACCAATTTATCACGAATTCTTCCCGGGTTCAACCTTCAAGTTCTGCAGAACCCCACCGAGAGCCTGCCACGACGAATGCAGAAGGAACTGCGACGCTTGCAGAAAGCCCATCAATGGATTCGTGTACCACTCCAAGAAAGACGACCTGGACCTCCACCCCTGCTGCCGAAACCTCGAGAGGAGTTAAGACGTGGAGTTCAATCTCCACAAGAAAGTCCAGGGGAAGTGCATGTGGTGCAAAAAGAAGAGCATGGGCAATGGCCACGACAATGGATGGTCCTACGTATCTGGGTGCGGCGAGTACCATGTGCACGTGGCTTGTGTCACCGAAATGGCTTTAGAAGAATGGTACAAGAGCCGAGGAGACTGGATCCATGCCGATAACGCCGACCAGGACCAACAATTGGCTCTGCAGAAGGTGAATCTGAAAGCAATTCAAGTTGGAGGGCGTGGGGATGGCGGAAGGGGGAGCAAGTTTTGGAGAATCCTCAAGGTCTTCATCAAGCATTGTTAG ATGGCCATGCGGTTTCGTAATCAGAGCCACCCGAAGCACGAACTGGAGCTGAAGAAGTACCTGAAACCTTACACCTGCGATGGCTGCAAGGAAATAGGCTTTGGGCCACGATACCGATTCGAAAAGTGCGATTTTGATCTTCACAAAGCCTTCCAGGGGAAGTGCATGTGGTGCAAAAAGAAGAGCATGGGCAATGGCCACGACAATGGATGGTCCTACGTATCTGGGTGCGGCGAGTACCATGTGCACGTGGCTTGTGTCACCGAAATGGCTTTAGAAGAATGGTACAAGAGCCGAGGAGACTGGATCCATGCCGATAACGCCGACCAGGACCAACAATTGGCTCTGCAGAAGGTGAATCTGAAAGCAATTCAAGTTGGAGGGCGTGGGGATGGCGGAAGGGGGAGCAAGTTTTGGAGAATCCTCAAGGTCTTCATCAAGCATTGTTAG ATGGCCATGCGGTTTCGTAATCAGAGCCACCCGAAGCACGAACTGGAGCTGAAGAAGTACCTGAAACCTTACACCTGCGATGGCTGCAAGGAAATAGGCTTTGGGCCACGATACCGATTCGAAAAGTGCGATTTTGATCTTCACAAAGCCTTCCAGGGGAAGTGCATGTGGTGCAAAAAGAAGAGCATGGGCAATGGCCACGACAATGGATGGTCCTACGTATCTGGGTGCGGCGAGTACCATGTGCACGTGGCTTGTGTCACCGAAATGGCTTTAGAAGAATGGTACAAGAGCCGAGGAGACTGGATCCATGCCGATAACGCCGACCAGGACCAACAATTGGCTCTGCAGAAGGTGAATCTGAAAGCAATTCAAGTTGGAGGGCGTGGGGATGGCGGAAGGGGGAGCAAGTTTTGGAGAATCCTCAAGGTCTTCATCAAGCATTGTTAG MAMRFRNQSHPKHELELKKYLKPYTCDGCKEIGFGPRYRFEKCDFDLHKAFQGKCMWCKKKSMGNGHDNGWSYVSGCGEYHVHVACVTEMALEEWYKSRGDWIHADNADQDQQLALQKVNLKAIQVGGRGDGGRGSKFWRILKVFIKHC Homology
BLAST of Spg039493 vs. NCBI nr
Match: XP_038891268.1 (uncharacterized protein LOC120080612 [Benincasa hispida]) HSP 1 Score: 221.9 bits (564), Expect = 3.8e-54 Identity = 116/229 (50.66%), Postives = 127/229 (55.46%), Query Frame = 0
BLAST of Spg039493 vs. NCBI nr
Match: XP_011656238.1 (uncharacterized protein LOC105435689 [Cucumis sativus] >KGN51307.1 hypothetical protein Csa_008103 [Cucumis sativus]) HSP 1 Score: 218.4 bits (555), Expect = 4.2e-53 Identity = 113/229 (49.34%), Postives = 130/229 (56.77%), Query Frame = 0
BLAST of Spg039493 vs. NCBI nr
Match: KAA0037668.1 (uncharacterized protein E6C27_scaffold277G003360 [Cucumis melo var. makuwa] >TYK22811.1 uncharacterized protein E5676_scaffold311G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 213.8 bits (543), Expect = 1.0e-51 Identity = 112/229 (48.91%), Postives = 129/229 (56.33%), Query Frame = 0
BLAST of Spg039493 vs. NCBI nr
Match: XP_011656237.1 (uncharacterized protein LOC105435688 [Cucumis sativus] >KGN51305.1 hypothetical protein Csa_008405 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 6.3e-49 Identity = 105/219 (47.95%), Postives = 124/219 (56.62%), Query Frame = 0
BLAST of Spg039493 vs. NCBI nr
Match: XP_022133597.1 (uncharacterized protein LOC111006136 [Momordica charantia]) HSP 1 Score: 195.7 bits (496), Expect = 2.9e-46 Identity = 106/229 (46.29%), Postives = 122/229 (53.28%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.7e-04 Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy TrEMBL
Match: A0A0A0KS98 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517070 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53 Identity = 113/229 (49.34%), Postives = 130/229 (56.77%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy TrEMBL
Match: A0A5A7T4E4 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00540 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 5.0e-52 Identity = 112/229 (48.91%), Postives = 129/229 (56.33%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy TrEMBL
Match: A0A0A0KNT1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G516820 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 3.0e-49 Identity = 105/219 (47.95%), Postives = 124/219 (56.62%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy TrEMBL
Match: A0A6J1BX53 (uncharacterized protein LOC111006136 OS=Momordica charantia OX=3673 GN=LOC111006136 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46 Identity = 106/229 (46.29%), Postives = 122/229 (53.28%), Query Frame = 0
BLAST of Spg039493 vs. ExPASy TrEMBL
Match: A0A5A7T8P1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00550 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.1e-42 Identity = 98/232 (42.24%), Postives = 125/232 (53.88%), Query Frame = 0
BLAST of Spg039493 vs. TAIR 10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 46/162 (28.40%), Postives = 57/162 (35.19%), Query Frame = 0
BLAST of Spg039493 vs. TAIR 10
Match: AT1G20990.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 44.7 bits (104), Expect = 7.7e-05 Identity = 19/40 (47.50%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Spg039493 vs. TAIR 10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04 Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|