Spg039450 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039450
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOB domain-containing protein
Location	scaffold10: 42215302 .. 42218905 (+)
RNA-Seq Expression	Spg039450
Synteny	Spg039450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCCGCCGCCGCCGCCTACGCCGACGGTGGTTCTCAGCCCGTGCGCCGCCTGTAAGATCCTCCGCCGGAAATGCGTCGATAAGTGCGTTTTAGCGCCTTATTTCCCTCCCACTGAGCCTCTCAAGTTCGCCGCCGTGCATAGAATATTTGGAGCTGGCAACGTCATCAAGTTCTTGCAGGTATAAAACTAACGTCATTAAACAATTTTCTCGAATCTTTTTTTTTAGTTCAACCACAATTTGAGGTGGAATGGCTCCAACCTTCCATCTCTTAATTGAAAGCATATGAACTATGTTTGAGTTAACGAACCAATATAATCAGTTAAAGGATTTCGATTGAATAGATGATTATTTCACTACAAATAATGCACAAAAAAAAAAAAAAAAAAAAACCCTTTATAAACTAGGTAAATTGATTTCTATCATAAGCTTTTACTTCATTGAACTTACCTGAGTGTTGCAACGTTTAATTTAAAGTTGAAATTGTGGTACAAATTTTTAACCTTATACGGTATAACTTTCCCTTTGAAGAATATTTTCACATGCATTTAATAAATTATGAAATATATCCTTTAAAAAATCTAAAAAGAAAACAACATTATAACCTATTTATTGATTTTCTAAACATAATTATATTGACTTTTGGGTAGAGTTATTTTCTATGGTTGATTTTATGCATGAGTTCTTAGTTTTGTGCTCAAACTTTTTTTTTTTTTTTTTTTAAATTGAATTTATTTGTAATGTCTTTTAGCTTTTTACAAATTTTTTGGGTTAAAATTAGTGGTTAAATTAGCGAAAATTAAACATAAGGTAAAAATTGTAATATTGTCTAACTCTAGGGTTAAATTTGATAAAACATTGACAATTTAAAATAAAAATTGATCCCTCTTATCAAATTTATGATAAAAATTGATTGTCTGTTTTTGTTTTCGTTTCTCCAATGAATATAATCAATATATTTGTGAAAACACGATACGAATATAGGAACTTTCCGAGGATCAGAGAGCAGATGCTGCGAGTAGTTTGGTGTACGAAGCGAACACGAGGATTCGAGACCCAATCTATGGTTGCACCGGTGCAATTTTTCAACTTCAAAATCAAGTGAGCGAACTCCATGCACAATTGGCTTTGGCAAAGGCCGAGATTCATAAGATGCAACTTCAACATGCAAATTTGTTAGCCATAATTTGCACCGAAACAAGTCAAGTTCAAGGTCAAGAAGATTCCATCTTCAGTCAACAACACTTTCCACTCACTGATTTTAGTCCTTTTCCACATAACTAAATTTCCATTTTTTTTTACTTGTATTTTCAATATTTTAATTAAGAAATGAGAATAGTGTTTGACTGCATATTTTCAATGGTCCTTTTTCACCTAACTAAAATTTTCTCGGTTGTTATCATTTTAATAGCGGTGTGTACTCTATGTTTTGATGTACTCGAAAACTGTTATGGAAAGAAAGAAAAAAAAAATAAAGTATTTCATGCATGTTTAATTAAATTATATATTTAAATTTATGTGATTTAGATCCTTGTTTTATTAAATAATATAATCTTTCTATCCACAACGAATCTCTTAAACGTGTGTATGAAAATGGCAAAATATATCAAGCTTGGACCACTTAAAAAAAATAAAAAATAAATACACTGTCTTTGAACATTGCCATTAATTTTTAATTTTGGCTCTTAAAAATTCAAATTAAAGTTGTTCAGTTTACTTTGGAATGGGGATGGTTGAACTAAAAATTGCCCAAACTTTTTCTCTCTTCTACAATCGACAAAAAGTTAAATCGACGTACTATTTTTCCAACAATAGGTTTATTTATATTGATTTTTTTTGGTCTGCAAATTGACTGAATAATGTTTCTTAATAATGATACACATACTTAATATTGAAACTATATAACTGTATTTAATAATACTAGTGCACACGTGAGAGGCTCGGATTTTTTAATTTAAAAAAGTATAAACTTATGGTTAAATTATATTAAAAAAAAACCTGAACAATGAGATTTGTTTCAATTATAGTCCTCAACTTTCAAAAGTTTCATTTTAATCCCTGAAGTTTGAAGCTTGTTTCAAAACGACCCATAGAGACATTTTTTGTTAAATTTATGAACGAATATGATGTTTTTGCCTGTGTTTTTATTGTTCTTTATCCACTTATATGTTCAAATATGTTCACATAAGCAACAAATAGAAATACAAACACGTCATTTTTCGTTCATAAATTTAATGGAAAATTGTCTTTAGGGGTTGTTTTGAAACAAACTTAAAATTTCAAGGGCTAAAAATAAACTTTTGAAAGTTCAATTGTATAATTGAAATGAACCTCATAGTTCAATGGTATTTATGATAATTTAACCTAAATTATTTATATGTTTAGGTTAAATTATCAAAAACATGATATGTTTCCAAATATATTTTGCATTTTTTTTTTCAAGATGTTTTAGAACAACTTCTTCGACATCGTTTTGTAAAGGTGAATATTCAAATATTTGACATTTCAATTGAAAATATAATACATACATTTGTATTTTGAGAATAATCAATTAGGCTCGTGTGTGTATATATATATATTTTATCTTTTCTATGCGGTAGTCCAAACTTTTTTTTTGTTTGATAATATATAAGGTGGGGAGATTTGAACCACAGACTTTGTGGTTATTAACTTTATGCCAATTGAGCTATGCTCTTGTTGGCGCGGTGGTCCAAACTTGCCTCCTGTATTTATGATTTAATACTTTATGCTAAAAAATCCAACTAAAACCATTAGATTGTACAAGATTTCATAGGATTTAGAGTTAAATTACTTATTTGACATTTCCATATTTTAATTTTCTATTAATAAATCAAAATTAAAAACCTATATTAGTGAACTTTTTATTTGTTTTTATTTTCCAATTACCATTCAAATACAAGATTTTAAATACACTCATTATAAATATTCTTCGTTAACGTTTTAAAGAATTGAAAATCATTTCTTGAATTTTAAATAACTGGATTTAAAATCATTTCTTAAACTTTTTATTTATTTTTTTAATTTTATTATTATTATTATTATTATTTTTATTGTGCATTGATATTTGATCATGATCGGTTTTTTCCTTTCAAATTGAAAATGCGAACTGTGAGATATGCAGATTGCTTCGTAGTGTTGGATCGAAAAGGCAGTTTTTCCATTTAATGCACTTTCAGTTTCCAAAAAAAAAAAGAAAGTTTCAAAAAAAGAAAAGGCAGTCGTTCGCGGTCAAAGAAAAAAAGAAAGAAATAAAGAAAAGCGTCTTTAATTCCGAAGGATATTTTCGTAATCATGCCTCCGAATTTCGAAACGACACCGTTCATCCGAAGCCTGGAGGCCATAAGCATTCATTCAGAATTTCCTCAAAATTAGGGTTTGGGTAGTTCGTAATTTTCTCTTCTAGCTCAGCTTTTGGGCGTTTCTCGTAGAAGTTGCAGGATCTCAATCCGCCATCATGGGGTACGCATTCTTCTCTTCCCTACTGCCTCCGTTGATTTTTTCTTGGATATCTGTGGATGCTAGTTCGCCATTCGTTCTTGAAGGAATTGTATTTGTGCTGTCTGCTTTTACTGTACTTTAG

mRNA sequence

ATGTTGCCGCCGCCGCCGCCTACGCCGACGGTGGTTCTCAGCCCGTGCGCCGCCTGTAAGATCCTCCGCCGGAAATGCGTCGATAAGTGCGTTTTAGCGCCTTATTTCCCTCCCACTGAGCCTCTCAAGTTCGCCGCCGTGCATAGAATATTTGGAGCTGGCAACGTCATCAAGTTCTTGCAGGAACTTTCCGAGGATCAGAGAGCAGATGCTGCGAGTAGTTTGGTGTACGAAGCGAACACGAGGATTCGAGACCCAATCTATGGTTGCACCGGTGCAATTTTTCAACTTCAAAATCAACTCAGCTTTTGGGCGTTTCTCGTAGAAGTTGCAGGATCTCAATCCGCCATCATGGGGTACGCATTCTTCTCTTCCCTACTGCCTCCGTTGATTTTTTCTTGGATATCTGTGGATGCTAGTTCGCCATTCGTTCTTGAAGGAATTGTATTTGTGCTGTCTGCTTTTACTGTACTTTAG

Coding sequence (CDS)

ATGTTGCCGCCGCCGCCGCCTACGCCGACGGTGGTTCTCAGCCCGTGCGCCGCCTGTAAGATCCTCCGCCGGAAATGCGTCGATAAGTGCGTTTTAGCGCCTTATTTCCCTCCCACTGAGCCTCTCAAGTTCGCCGCCGTGCATAGAATATTTGGAGCTGGCAACGTCATCAAGTTCTTGCAGGAACTTTCCGAGGATCAGAGAGCAGATGCTGCGAGTAGTTTGGTGTACGAAGCGAACACGAGGATTCGAGACCCAATCTATGGTTGCACCGGTGCAATTTTTCAACTTCAAAATCAACTCAGCTTTTGGGCGTTTCTCGTAGAAGTTGCAGGATCTCAATCCGCCATCATGGGGTACGCATTCTTCTCTTCCCTACTGCCTCCGTTGATTTTTTCTTGGATATCTGTGGATGCTAGTTCGCCATTCGTTCTTGAAGGAATTGTATTTGTGCTGTCTGCTTTTACTGTACTTTAG

Protein sequence

MLPPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIMGYAFFSSLLPPLIFSWISVDASSPFVLEGIVFVLSAFTVL

Homology

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BLAST of Spg039450 vs. NCBI nr
Match: XP_022939142.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP   VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE
Sbjct: 5   PPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 64

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           L E+QRADA SSLVYEAN RIRDP+YGCTG+IFQLQNQ+S
Sbjct: 65  LPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS 104

[Close]

BLAST of Spg039450 vs. NCBI nr
Match: KAG7016272.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP   VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE
Sbjct: 4   PPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 63

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           L E+QRADA SSLVYEAN RIRDP+YGCTG+IFQLQNQ+S
Sbjct: 64  LPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS 103

[Close]

BLAST of Spg039450 vs. NCBI nr
Match: KAG6578743.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-43
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP   VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE
Sbjct: 4   PPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 63

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           L E+QRADA SSLVYEAN RIRDP+YGCTG+IFQLQNQ+S
Sbjct: 64  LPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS 103

[Close]

BLAST of Spg039450 vs. NCBI nr
Match: XP_023551518.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.9e-41
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 11  VVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRAD 70
           VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQEL E+QRAD
Sbjct: 2   VVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPENQRAD 61

Query: 71  AASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           A SSLVYEAN RIRDPIYGCTG+IFQLQNQ+S
Sbjct: 62  ATSSLVYEANARIRDPIYGCTGSIFQLQNQVS 93

[Close]

BLAST of Spg039450 vs. NCBI nr
Match: KAE8648523.1 (hypothetical protein Csa_008698 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-40
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 6   PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSE 65
           PP  TVVLSPCAACKILRR+CVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQEL E
Sbjct: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65

Query: 66  DQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQL 102
            QRADAASSLVYEAN RIRDPIYGCTG+IFQLQN++
Sbjct: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKV 101

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BLAST of Spg039450 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-38
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 3   PPP----PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIK 62
           PPP    PP P VVLSPCAACKILRR+C DKCVLAPYFPPT+P KF   HR+FGA N+IK
Sbjct: 39  PPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIK 98

Query: 63  FLQELSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIM 122
           FLQEL E QR DA +S+VYEA  R+RDP+YGC GAI+ LQ Q+S      ++A +Q  ++
Sbjct: 99  FLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVS--ELQAQLAKTQVELV 158

Query: 123 GYAFFSSLLPPLIFS 134
           G     S L  LI++
Sbjct: 159 GMQLQRSSLLELIYN 171

[Close]

BLAST of Spg039450 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPP  +P VVLSPCAACKILRR+C ++CVLAPYFPPT+P KF   HR+FGA N+IKFLQE
Sbjct: 21  PPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQE 80

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIMGYAF 122
           L E QR DA +S+VYEA  RIRDP+YGC GAI+ LQ Q+S      ++A +Q  ++   F
Sbjct: 81  LPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS--ELQAQLAKAQVEMVNMQF 140

Query: 123 FSSLLPPLIFS 134
             S L  LI++
Sbjct: 141 QRSNLLELIYN 149

[Close]

BLAST of Spg039450 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 14  SPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRADAAS 73
           SPCA+CK+LRR+C   C+ APYFPP +P KFA VH++FGA NV K LQEL   QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQ 115
           SLV+EAN R+RDP+YGC GAI  LQNQ+S     + VA ++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAE 107

[Close]

BLAST of Spg039450 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-30
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 6   PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSE 65
           PP     ++PCAACK+LRR+C  +C  +PYF P EP KFA+VH++FGA NV K L E+ E
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 66  DQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIMGY 121
            QRADAA+SLVYEAN R+RDP+YGC GAI  LQ Q+   A   E+   +S I+ Y
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQ--ALQAELTAVRSEILKY 148

[Close]

BLAST of Spg039450 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 14  SPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRADAAS 73
           SPCAACK+LRR+C   CV +PYFP  EP KFA VHR+FGA NV K LQEL   QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANTRIRDPIYGCTGAIFQLQNQL 102
           S+VYEAN R+RDP+YGC GAI  LQ Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQI 99

[Close]

BLAST of Spg039450 vs. ExPASy TrEMBL
Match: A0A6J1FFZ7 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445138 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 9.0e-44
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP   VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE
Sbjct: 5   PPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 64

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           L E+QRADA SSLVYEAN RIRDP+YGCTG+IFQLQNQ+S
Sbjct: 65  LPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVS 104

[Close]

BLAST of Spg039450 vs. ExPASy TrEMBL
Match: A0A0A0KU20 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.4e-41
Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 6   PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSE 65
           PP  TVVLSPCAACKILRR+CVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQEL E
Sbjct: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65

Query: 66  DQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQL 102
            QRADAASSLVYEAN RIRDPIYGCTG+IFQLQN++
Sbjct: 66  GQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKV 101

[Close]

BLAST of Spg039450 vs. ExPASy TrEMBL
Match: W9RZL7 (LOB domain-containing protein OS=Morus notabilis OX=981085 GN=L484_014124 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-40
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 2   LPPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ 61
           LPPPPP P VVLSPCAACKILRR+CVDKCVLAPYFPPTEPLKF   HR+FGA N+IKFLQ
Sbjct: 65  LPPPPPPPPVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQ 124

Query: 62  ELSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           E+ E QRADA SS+VYEAN RIRDP+YGC GAI QLQ Q+S
Sbjct: 125 EIPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVS 165

[Close]

BLAST of Spg039450 vs. ExPASy TrEMBL
Match: A0A7J6HG23 (LOB domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_023402 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 77/100 (77.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP P +V+SPCAACKILRR+CVDKCVLAPYFPPTEP+KF   HR+FGA N+IKFLQE
Sbjct: 70  PPPPPPPAIVMSPCAACKILRRRCVDKCVLAPYFPPTEPIKFTIAHRVFGASNIIKFLQE 129

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           + E QRADA SS+VYEAN RIRDP+YGC GAI QLQ Q+S
Sbjct: 130 IPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVS 169

[Close]

BLAST of Spg039450 vs. ExPASy TrEMBL
Match: A0A7J6GHC9 (LOB domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011577 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-39
Identity = 77/100 (77.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPPPP P +V+SPCAACKILRR+CVDKCVLAPYFPPTEP+KF   HR+FGA N+IKFLQE
Sbjct: 70  PPPPPPPAIVMSPCAACKILRRRCVDKCVLAPYFPPTEPIKFTIAHRVFGASNIIKFLQE 129

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLS 103
           + E QRADA SS+VYEAN RIRDP+YGC GAI QLQ Q+S
Sbjct: 130 IPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVS 169

[Close]

BLAST of Spg039450 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 3   PPP----PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIK 62
           PPP    PP P VVLSPCAACKILRR+C DKCVLAPYFPPT+P KF   HR+FGA N+IK
Sbjct: 39  PPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIK 98

Query: 63  FLQELSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIM 122
           FLQEL E QR DA +S+VYEA  R+RDP+YGC GAI+ LQ Q+S      ++A +Q  ++
Sbjct: 99  FLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVS--ELQAQLAKTQVELV 158

Query: 123 GYAFFSSLLPPLIFS 134
           G     S L  LI++
Sbjct: 159 GMQLQRSSLLELIYN 171

[Close]

BLAST of Spg039450 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 0


Query: 3   PPPPPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQE 62
           PPP  +P VVLSPCAACKILRR+C ++CVLAPYFPPT+P KF   HR+FGA N+IKFLQE
Sbjct: 21  PPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQE 80

Query: 63  LSEDQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIMGYAF 122
           L E QR DA +S+VYEA  RIRDP+YGC GAI+ LQ Q+S      ++A +Q  ++   F
Sbjct: 81  LPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVS--ELQAQLAKAQVEMVNMQF 140

Query: 123 FSSLLPPLIFS 134
             S L  LI++
Sbjct: 141 QRSNLLELIYN 149

[Close]

BLAST of Spg039450 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 134.4 bits (337), Expect = 7.9e-32
Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 14  SPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRADAAS 73
           SPCA+CK+LRR+C   C+ APYFPP +P KFA VH++FGA NV K LQEL   QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQ 115
           SLV+EAN R+RDP+YGC GAI  LQNQ+S     + VA ++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAE 107

[Close]

BLAST of Spg039450 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-31
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 6   PPTPTVVLSPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSE 65
           PP     ++PCAACK+LRR+C  +C  +PYF P EP KFA+VH++FGA NV K L E+ E
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 66  DQRADAASSLVYEANTRIRDPIYGCTGAIFQLQNQLSFWAFLVEVAGSQSAIMGY 121
            QRADAA+SLVYEAN R+RDP+YGC GAI  LQ Q+   A   E+   +S I+ Y
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQ--ALQAELTAVRSEILKY 148

[Close]

BLAST of Spg039450 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-31
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 14  SPCAACKILRRKCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELSEDQRADAAS 73
           SPCAACK+LRR+C   CV +PYFP  EP KFA VHR+FGA NV K LQEL   QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANTRIRDPIYGCTGAIFQLQNQL 102
           S+VYEAN R+RDP+YGC GAI  LQ Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQI 99

The following BLAST results are available for this feature:

BLAST of Spg039450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939142.1	1.9e-43	89.00	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
KAG7016272.1	1.9e-43	89.00	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6578743.1	1.9e-43	89.00	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551518.1	3.9e-41	92.39	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAE8648523.1	1.9e-40	86.46	hypothetical protein Csa_008698 [Cucumis sativus]	[more]

BLAST of Spg039450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK08	2.5e-38	59.26	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	1.6e-37	58.78	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q8LBW3	1.1e-30	60.40	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	1.4e-30	55.65	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9SHE9	1.2e-29	67.05	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]

BLAST of Spg039450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFZ7	9.0e-44	89.00	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A0A0KU20	9.4e-41	86.46	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV...	[more]
W9RZL7	1.6e-40	80.20	LOB domain-containing protein OS=Morus notabilis OX=981085 GN=L484_014124 PE=3 S...	[more]
A0A7J6HG23	1.4e-39	77.00	LOB domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_023402 PE=3 SV...	[more]
A0A7J6GHC9	1.4e-39	77.00	LOB domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_011577 PE=3 SV...	[more]

BLAST of Spg039450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28500.1	1.7e-39	59.26	LOB domain-containing protein 11	[more]
AT1G07900.1	1.1e-38	58.78	LOB domain-containing protein 1	[more]
AT2G30130.1	7.9e-32	60.40	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	1.0e-31	55.65	LOB domain-containing protein 15	[more]
AT1G31320.1	8.7e-31	67.05	LOB domain-containing protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..102 e-value: 8.6E-38 score: 128.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 24.254507
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 9..102
None	No IPR available	PANTHER	PTHR31301:SF14	DOMAIN PROTEIN 1, PUTATIVE, EXPRESSED-RELATED	coord: 9..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039450.1	Spg039450.1	mRNA