Spg039401 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039401
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Duplicated homeodomain-like superfamily protein
Location	scaffold10: 46022668 .. 46023042 (-)
RNA-Seq Expression	Spg039401
Synteny	Spg039401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCTCGAATCGGTGTCCGGACAAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAAATACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAAGACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCCTAAAGAAAAGGAAGAACACAGGCGAGTTTCCTTCACTAAACTATATGGGGATGCCTTCAAAGTTGAAACAACTCCACGTTACGATTTTTGA

mRNA sequence

ATGTCGACCTCGAATCGGTGTCCGGACAAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAAATACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAAGACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCCTAAAGAAAAGGAAGAACACAGGCGAGTTTCCTTCACTAAACTATATGGGGATGCCTTCAAAGTTGAAACAACTCCACGTTACGATTTTTGA

Coding sequence (CDS)

ATGTCGACCTCGAATCGGTGTCCGGACAAAGAGCAGAGGAGAGAGTGGACGTTTACTGAGAATGTAGCATTTGACACGGCTCTTAGAATGTACAATGAGAAAACTCCGGACCGATGGCACAAGGTGGTGGCTTGTGTTCCATGGAAGACTCTGAGGGATGTGATCGATCATTATGCCGAAATACATGGAGAGTTATATAACATTGAAGCCGGTACAGTTCCACTTGTAAATTATGAGGCTAAGACCAATTCTGATCGGCCGACTTCCAAGAACCGGGAAACGCCTAAAGAAAAGGAAGAACACAGGCGAGTTTCCTTCACTAAACTATATGGGGATGCCTTCAAAGTTGAAACAACTCCACGTTACGATTTTTGA

Protein sequence

MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPLVNYEAKTNSDRPTSKNRETPKEKEEHRRVSFTKLYGDAFKVETTPRYDF

Homology

[Close]

BLAST of Spg039401 vs. NCBI nr
Match: KAE9605999.1 (putative transcription factor MYB/SANT family [Lupinus albus] >KAF1889377.1 hypothetical protein Lal_00024702 [Lupinus albus])

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-12
Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 15  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVP 74
           +WT +EN  F+ AL +Y+++TPDRWHK+ A +P KT+ DV+  Y E+  ++ NIEAG VP
Sbjct: 29  KWTASENKLFENALAVYDKETPDRWHKLAAMIPGKTVSDVMRQYKELEADVCNIEAGLVP 88

Query: 75  LVNYEAKTNSDRPTS 90
           +  Y++ TN+   T+
Sbjct: 89  VPGYDSATNTITTTT 103

[Close]

BLAST of Spg039401 vs. NCBI nr
Match: XP_031277790.1 (transcription factor DIVARICATA-like [Pistacia vera])

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-12
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 1  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAE 60
          +ST+N   +  +  +WT  EN  F+ AL +Y++ TPDRWHKV A +P KT+ DVI  Y E
Sbjct: 14 LSTNNWVLEDSKTTKWTAQENKIFENALAIYDKDTPDRWHKVAAMIPGKTVVDVIKQYKE 73

Query: 61 IHGELYNIEAGTVPLVNYEAKTNS 85
          +  ++ NIEAG +P+  Y   TNS
Sbjct: 74 LEADVSNIEAGLIPIPGYN-NTNS 96

[Close]

BLAST of Spg039401 vs. NCBI nr
Match: GER30485.1 (duplicated homeodomain-like superfamily protein [Striga asiatica])

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-12
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 16  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
           WT  EN AF+ AL  ++EKTPDRWHKV A VP KT+ D+I HY ++  ++ +IE+G V +
Sbjct: 21  WTPAENKAFENALAFFDEKTPDRWHKVAAMVPTKTVLDIISHYKKLEFDITSIESGLVRI 80

Query: 76  VNYEAKTNSDRPTSKNRETPKEKEEHR 103
             Y A ++S     + +     +EEH+
Sbjct: 81  PGYSATSSSSSSQERKKGILWTEEEHK 107

[Close]

BLAST of Spg039401 vs. NCBI nr
Match: GFP80575.1 (transcription factor divaricata [Phtheirospermum japonicum])

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-12
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 14  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTV 73
           R WT  EN AF+ AL +++E TPDRWHKV A VP KT+ DVI  Y E+  ++ +IEAG V
Sbjct: 42  RRWTAAENKAFENALAVFDENTPDRWHKVAAMVPGKTVGDVIRQYKELEDDVTSIEAGLV 101

Query: 74  PLVNYEAKTNSDRP 88
           P+  Y   ++   P
Sbjct: 102 PVPGYATSSSLSSP 115

[Close]

BLAST of Spg039401 vs. NCBI nr
Match: KAB5520377.1 (hypothetical protein DKX38_024696 [Salix brachista])

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-12
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 1  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAE 60
          +S +N   ++ +  +WT  EN AF+ AL +Y++ TPDRWHKV A +P KT+RDVI  Y E
Sbjct: 14 LSRANWLVEESKNTKWTPAENKAFENALAVYDDDTPDRWHKVAAIIPGKTVRDVIKQYKE 73

Query: 61 IHGELYNIEAGTVPLVNY 79
          +  ++  IEAG +P+  Y
Sbjct: 74 LELDVSYIEAGLIPVPGY 91

[Close]

BLAST of Spg039401 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.9e-12
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 76 VNYEAKTNSDR 87
           NY+   ++ R
Sbjct: 72 PNYKTFESNSR 82

[Close]

BLAST of Spg039401 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10
Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 16  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
           WT  EN AF+ AL +++E TP+RW +V   VP KT+ DV+  Y E+  ++ +IEAG VP+
Sbjct: 26  WTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPV 85

Query: 76  VNYEA--------------------------KTNSDRPTSKNRE--TPKEKEEHR 103
             Y                            K++S RP+ + R+   P  +EEH+
Sbjct: 86  PGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEHK 140

[Close]

BLAST of Spg039401 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-08
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WT  EN  F+ AL  Y++ TPDRWH V   V  K+  +V  HY  +  ++ +IE+G  P 
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71

Query: 76 VNYEAKTNS 85
           NY +  N+
Sbjct: 72 PNYRSNGNN 80

[Close]

BLAST of Spg039401 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WT  +N AF+ AL +Y++ TPDRWH V   V  KT  +    Y  +  ++ +IE G VP 
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73

Query: 76 VNYEAKT-NSDRPTSKNRE 94
           +Y+  T NS+R   ++ E
Sbjct: 74 PDYKTTTGNSNRGRLRDEE 92

[Close]

BLAST of Spg039401 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 14  REWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTV 73
           R W+  EN AF+ AL +Y++ TPDRW  V   V  +T  +V  HY  +  ++  IE+G V
Sbjct: 9   RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKV 68

Query: 74  PLVNYEAKTNSDRPTSKNRETPKEKEEHRRV 105
           P  NY       R T  N +T +++  + ++
Sbjct: 69  PFPNY-------RTTGGNMKTDEKRFRNLKI 92

[Close]

BLAST of Spg039401 vs. ExPASy TrEMBL
Match: A0A6A5NSE9 (Putative transcription factor MYB/SANT family OS=Lupinus albus OX=3870 GN=Lal_00024702 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12
Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 15  EWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVP 74
           +WT +EN  F+ AL +Y+++TPDRWHK+ A +P KT+ DV+  Y E+  ++ NIEAG VP
Sbjct: 29  KWTASENKLFENALAVYDKETPDRWHKLAAMIPGKTVSDVMRQYKELEADVCNIEAGLVP 88

Query: 75  LVNYEAKTNSDRPTS 90
           +  Y++ TN+   T+
Sbjct: 89  VPGYDSATNTITTTT 103

[Close]

BLAST of Spg039401 vs. ExPASy TrEMBL
Match: A0A5A7PC39 (Duplicated homeodomain-like superfamily protein OS=Striga asiatica OX=4170 GN=STAS_06430 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-12
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 16  WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
           WT  EN AF+ AL  ++EKTPDRWHKV A VP KT+ D+I HY ++  ++ +IE+G V +
Sbjct: 21  WTPAENKAFENALAFFDEKTPDRWHKVAAMVPTKTVLDIISHYKKLEFDITSIESGLVRI 80

Query: 76  VNYEAKTNSDRPTSKNRETPKEKEEHR 103
             Y A ++S     + +     +EEH+
Sbjct: 81  PGYSATSSSSSSQERKKGILWTEEEHK 107

[Close]

BLAST of Spg039401 vs. ExPASy TrEMBL
Match: A0A5A7P647 (Duplicated homeodomain-like superfamily protein OS=Striga asiatica OX=4170 GN=STAS_03841 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-12
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WT  EN AF+ AL ++++ TPDRWHKV A VP KT+ DVI HY E+  ++ +IEAG VP+
Sbjct: 31 WTPAENKAFENALALFDDNTPDRWHKVAAMVPTKTVLDVIRHYKELEDDVTSIEAGLVPV 90

Query: 76 VNYEAKTNS 85
            Y    +S
Sbjct: 91 PGYSCHVSS 99

[Close]

BLAST of Spg039401 vs. ExPASy TrEMBL
Match: A0A5N5JZT6 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_024696 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.2e-12
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 1  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAE 60
          +S +N   ++ +  +WT  EN AF+ AL +Y++ TPDRWHKV A +P KT+RDVI  Y E
Sbjct: 14 LSRANWLVEESKNTKWTPAENKAFENALAVYDDDTPDRWHKVAAIIPGKTVRDVIKQYKE 73

Query: 61 IHGELYNIEAGTVPLVNY 79
          +  ++  IEAG +P+  Y
Sbjct: 74 LELDVSYIEAGLIPVPGY 91

[Close]

BLAST of Spg039401 vs. ExPASy TrEMBL
Match: B9SHX6 (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0611390 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.5e-12
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 1  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAE 60
          +S++N   ++ +  +WT  EN  F+ AL +Y++ TPDRWHKV A +P KT+ DVI  Y E
Sbjct: 14 LSSTNWLIEESKNTKWTPAENKMFENALAVYDKDTPDRWHKVAAMIPGKTVGDVIKQYRE 73

Query: 61 IHGELYNIEAGTVPLVNY 79
          +  ++ NIEAG VP+  Y
Sbjct: 74 LEVDVNNIEAGLVPIPGY 91

[Close]

BLAST of Spg039401 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-14
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WT  EN AF+ AL +Y++ TPDRW KV A +P KT+ DVI  Y ++  ++ +IEAG +P+
Sbjct: 34 WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 76 VNY 79
            Y
Sbjct: 94 PGY 96

[Close]

BLAST of Spg039401 vs. TAIR 10
Match: AT5G05790.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 9.9e-14
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 12 QRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAG 71
          Q   WT  EN  F+ AL +Y + TPDRW KV A +P KT+ DV+  Y+++  +L++IEAG
Sbjct: 27 QSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAG 86

Query: 72 TVPLVNYEAKT 83
           VP+  Y + T
Sbjct: 87 LVPIPGYRSVT 97

[Close]

BLAST of Spg039401 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-13
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 1  MSTSNRCPDKEQRREWTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAE 60
          + TSN    + +  +WT  EN  F+ AL  Y++ TPDRW +V A +P KT+ DVI  Y E
Sbjct: 14 LETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRE 73

Query: 61 IHGELYNIEAGTVPLVNY 79
          +  ++ +IEAG +P+  Y
Sbjct: 74 LEEDVSDIEAGLIPIPGY 91

[Close]

BLAST of Spg039401 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 71.6 bits (174), Expect = 4.9e-13
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 76 VNYEAKTNSDR 87
           NY+   ++ R
Sbjct: 72 PNYKTFESNSR 82

[Close]

BLAST of Spg039401 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 71.6 bits (174), Expect = 4.9e-13
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 16 WTFTENVAFDTALRMYNEKTPDRWHKVVACVPWKTLRDVIDHYAEIHGELYNIEAGTVPL 75
          WTF++N  F+ AL +Y++ TPDRWH V   V  KT+ +V  HY  +  +L NIE G VPL
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 76 VNYEAKTNSDR 87
           NY+   ++ R
Sbjct: 72 PNYKTFESNSR 82

The following BLAST results are available for this feature:

BLAST of Spg039401 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE9605999.1	3.9e-12	45.33	putative transcription factor MYB/SANT family [Lupinus albus] >KAF1889377.1 hypo...	[more]
XP_031277790.1	3.9e-12	45.24	transcription factor DIVARICATA-like [Pistacia vera]	[more]
GER30485.1	8.7e-12	42.53	duplicated homeodomain-like superfamily protein [Striga asiatica]	[more]
GFP80575.1	8.7e-12	48.65	transcription factor divaricata [Phtheirospermum japonicum]	[more]
KAB5520377.1	8.7e-12	44.87	hypothetical protein DKX38_024696 [Salix brachista]	[more]

BLAST of Spg039401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1A173	6.9e-12	45.07	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8S9H7	3.8e-10	33.04	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q6NNN0	2.7e-08	39.13	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q9SIJ5	6.0e-08	37.97	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q58FS3	1.0e-07	34.07	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]

BLAST of Spg039401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5NSE9	1.9e-12	45.33	Putative transcription factor MYB/SANT family OS=Lupinus albus OX=3870 GN=Lal_00...	[more]
A0A5A7PC39	4.2e-12	42.53	Duplicated homeodomain-like superfamily protein OS=Striga asiatica OX=4170 GN=ST...	[more]
A0A5A7P647	4.2e-12	50.72	Duplicated homeodomain-like superfamily protein OS=Striga asiatica OX=4170 GN=ST...	[more]
A0A5N5JZT6	4.2e-12	44.87	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_024696 PE=4 SV=1	[more]
B9SHX6	5.5e-12	44.87	DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0611390 PE=4 S...	[more]

BLAST of Spg039401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58900.1	7.6e-14	47.62	Homeodomain-like transcriptional regulator	[more]
AT5G05790.1	9.9e-14	45.07	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	2.9e-13	41.03	Duplicated homeodomain-like superfamily protein	[more]
AT1G75250.1	4.9e-13	45.07	RAD-like 6	[more]
AT1G75250.2	4.9e-13	45.07	RAD-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 12..64 e-value: 2.9E-4 score: 30.2
None	No IPR available	GENE3D	1.10.10.60		coord: 8..75 e-value: 3.1E-15 score: 57.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	PANTHER	PTHR43952:SF68	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 12..92
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 12..92
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039401.1	Spg039401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity