Spg039374 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039374
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold10: 41566077 .. 41571606 (-)
RNA-Seq Expression	Spg039374
Synteny	Spg039374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGTTCAATAGAGGGATTTCGTTTCAAGATCGCCTTCGGAAGTTCCTACAGAATTGCAAGACAGGTAATGCTACCGCCACTGATGCATTTCACTGCTTTGACCTAATGATGCTGGCAAGACCTACCCCTTCCATGTCTTCATTCAATATTTTACTTGGTGGGCTTGCTAAGATTAAGCATTATTCTGAAGTTTTTCAGCTGTATAATAGAATGAGCTTAGCTGGACTTTTGTCTAATTTCATCACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAACCGGGTTAGCGAAGGTCTTGCGGCCATGGCAGTAATGATAAGGAGATGTTATATTCCTGATATAGTGACATATACGTCCTTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTATGAGAATGCAAAAATTGGGTTGTAGGCCAAATGTGATTACTTATGGTACTTTAATGAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATGCTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAATACCATTATAGATAGGCTCTGTAAAGAAGAACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATGCGTCCAGATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAATGTCTATTCAATGAGATGGTGGATCATGGTGTTCAACCAAATGTGGTTACTTATTGTACTTTAATCAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATACTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCTTGATGTTATTTGTTATAGTACCATTATAGATGAGCTCTGTAAAGAAGGACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATCCGTCCAAATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAACGTCTAATCAATGAGATGGTGGATCATGGTGTTCAACCAGATTTGGTCACATTTAATGTGTTGATGGATATGTTTTGCAAGGCAGGAAAGGTTAATGAGGCTAAGGAGTTGCTAGAAGTGATGATTCAGAGAGGTAATGTTCCTGATTTGGTTAGTTATAATACATTGATGGAAGGGTTATGTTTGGTTGGCGACCTAAACAGTGCAAGAGATCTATTTGTTAATATGCGAAGTCAGGGGTGTGAACCTAATGTCATTAGCTACACTGTGCTAATCAATGGGTTTTGCAAAAATAGGAAGGTGGAAGAAGCAAGGAAGCTTTACAATGAAATGCTTGAAGTGGGAATTAAGCCATCTTTGATTACATACAGTACCTTGTTAACGGGTCTCTTTCAGGCAGGCAAAGTTGATGATGCAAAGAAAATATTTGGTGTCATTAAAGCTCATGGTCTGACACCAGATTCAATTACATTTAGTATTTTCTTAGATGGGCTGTGTAGGAATGATTGTTTGGTTGAAGCAGTGGAGTTTTTTAATGGGCTATCATACAACTTGAAATTGAACGTTGTTATCTTTAATAGTCTTATCAATGGTTTATGTAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTTGACACATTGTCCCTTGAGGGGCTTCTACCAGATGTTGCAGCTTATAACATTTTGATCCAGGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTACTTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACGAGAGGAAGTGGTTAAACTTCTGCATAAAATGGTTCAAAAAAATGTGTCCCCAGATGATTCCACTTGCACCGTAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGGTTGATGACAATTCAAATATCTATGGACTAATAAGGAACCATGGCTTGTAAATTCTGATCAGTTTTACCCTTAAAAGCAGAATGTTTGGAAATCTGAAGCTCTGTTGGTTGAGCTTGTTGCAACAGTGTGTAGCTACCAAGTTTAAGTTGAGAAATTTTTGAGTTCTACCAGATGTTGCAACTTATTCCATTTTGATCCAGAGGTGTTGTAAAGAAGGACAAGCATTAAAAGGCAAATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAACTTATTCCATTTTGAGTTCTACCAGAAGTGGTTTCGATTTCACCCCACCGACGAGGAGATTGTGCGCTATTATCTTAGGCGCAAGGTTTCCGGCAAGCCCATCGGCTTTGATGTCATCTCCGTCATTGACATATACAAATCGGAGCCGTGGGACCTTCCTGGTAAGATACTTTCTCTTTCTCTGCTTGATGTGTGTATATTTTGTTGGGAGTTCAGGTGATCAAGTTGCTATTTTTTTGGGATTTTTTTTTCCAGAGAAGTCGAAGCTTAGGACTAGGGACCTGGAGTGGTACTTTTTTAGTCCTTTGGATAAGAAGTATGGCTATGGTTCGAGGACGAATAAAGCTACCGAAAAAGGGTACTGGAAGACGACTGGGAAGGATCGGCCGGTACGTCATAACGCCCGAGTAGTTGGGATGAAGAAGACTCTTGTTTACCACAGCGGGCGGGCGCCTCGCGGAGCTCGTAGTAATTGGGTGATGCATGAATACAAATTAACGGATGAGGACTTGGAGAAAACTGGGATTGTGCAGGTGAGGATATTGAAATTCTTCGTTTTCCTTTTTGTGGTTTTTGTGTTTTGTGTACTCACTTTTTTCTTGTCTTCTGCTGGGTTTTAATTCTTGTTGAATTTGTTTGGCTATTGTCTTGGATGGGCAGGATGCTTTTGTGCTTTGTAGGATATTTCAAAAGAGTGGTTCGGGGCCAAAGAATGGAGAACAATATGGAGCTCCATTTATCGAAGAGGAGTGGGAGGATGATGAAGAGTTAACTCTGCCTGGCGAGGAGGTTGTGGTCAATGAGGGGTTAGTTAATCTCGATGATGATATGCATTTTGAAGTGGATGACATTGCTCAGGTTTGTGTTTTGTTCAATTTCAATATAACCCACGACCTTCTATTTACTACTAAAATTTCCATCATTAGGACGGACTGACAATTTTGAATCCTTGTGTTGCCGTAATGAAAAAGATAAATATTGTTTCGTCACCAGTAAAGTCACAAAGGATCATCTAAACCTGTCTCTTCTCACTCTCTTGCTGCATTAGTTAATTTGAAGTGTGCTCAAGATCCTCCTTAAGTTTGTTTAGTGAACTGTATAAGTAGAAAATAGAATGGTTCATTATTTGCAAATGGAAAATGAAGCATGTGTATATAAAATGAGGGTCAAGGATGAGCGAAAGCATGATTGTTTACAAAATTTCCTTCTCAAAGTGTACTTTATTCAATTAATGGCGAGATAAAGAGAGTTTTGGGAGCAATGTTTTCAAGGGGGGAAACAGAACTATCAATGCGTCAAAGGCGCTAAAGCATTTTCCACCCCAGGGGGCGGCCTCATTAGTTAGATTTTTGGGGATTTAGGTGGGATCATGGTCTAAAATCATCCTGCATTGAACCTTTAGGTGGAACTTTTGATGGAAGAATACATTCTCTCCTGAATCTAGCAGCAGTATGGTTTGCAATGTGTCCCGTTAGATCAGTAGATAGAGCTGTTATTACCTATTTAAAAAAGGACACTCAAATTATTTTTCAGAATCTAAAATCTTGAATAGTACTCTTAGACTCAATTAGTTAAAAGGTTGCAGTTATTATCTGTTTAAAAGTGTGACGATTTAATTAACTTTTTCTCTCATGCTCTTTTTCATAGAACTTTCAAGCTAATTAAAGATACTTGGATACTTTTTTCTCTCTTTTGGACAGCAGTATTTTGATGGAGGACTTCCATTTGAATACGATCAACTTCCATCGAACTATCCTGAAGATGCAACCAATCATGTTGAGCTGCCCAATGTGCTTGTTGAAAATGATAATAAACCAGATGTATGTGTAGGCGATACATTGGACCTACACCATAACCACGGATTCTTTCAATTACCAGAGCAATATGGAATGGGTGGGAGTTCTGGAAAAGATGAGTGTTTTGCTGAATCAAGTGGTAATCTTGCTGAATCAAGTGATAATCTTAAGGATGAGGATATTGATTACTTACTCTATGAGCCTTACCCAAGTGGTTCGGATGATCTGGCCCTCAATGAGGAATCGTTCCTAGAGGCTAATGATCTTTCAAATCCAGTTGAAACTGATCCAATTGGTATCGACGTGCTTGAAGAATATCTTACATTCTTTGATGCAGATGATGACAACTTTCAGTTGTCCTTTGACCCAACAGAACTTTTGGGTAGTGAAGAACCTATTTCTGGCCAAACAATTCCTGAAGAGGTAAACTTTACCTTCAAGTAATACAGTTGAGCATTTGGGCTTTCTAACTTTGAAAATCTAACTTCAATTAAACTTACTATATCTCTGAACAGAAAACAATTGGAAAGGTAGGAAATGAGTTCATGGCCACCAAACAAGCCTCTTCTGCTTCCATCAATGATGCATCCAGTTCAAAGCAAAATCCCAAAGCTATTGACACAGGTTCAGGTAGAATTCTCTACATAAAAATTTAAACATTAATAGTTAGAATCAAGATGGTAGATACTTTTTTCATGATATCTTATACTCATTAAGGAGGCCTTGTTGTTCCAGATTCAATCACCATTCCTCAAACGTGTCAGTCACCTGTTGGGCGACATCCCTGCACCTCCTGCATTTGCTTCTGAGTATCCATCAAAGGACATGGCCATTCGGCTCAACTCAACAGCTGAAACTTCCAGTTCAGTTCATATGACTGCTGGAATGATCCATATAAGAAACTTGACATCAAATGGGGATCTGGTGAGTTCCTTATATGGAGTTTTTTAATGGGCTATCATACAACTTGAAATTGAACATTGTTATCTTTAATAGTCTTATCAATGGCCTATGTAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTTGACACATTGTCCCTTGAAGGGCTTCTACCAGATGTTGCAACTTATAACATTTTGATCCAGGGGTGTTGTAGAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTAATTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACAAGAGGAAGTGGTTAAACTTCTGCATAGAATGGTTCAGAAAAATGTTTCCCCAGATGCTTCCACTTGCACGATAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGGTTGA

mRNA sequence

ATGGAAAAGTTCAATAGAGGGATTTCGTTTCAAGATCGCCTTCGGAAGTTCCTACAGAATTGCAAGACAGGTAATGCTACCGCCACTGATGCATTTCACTGCTTTGACCTAATGATGCTGGCAAGACCTACCCCTTCCATGTCTTCATTCAATATTTTACTTGGTGGGCTTGCTAAGATTAAGCATTATTCTGAAGTTTTTCAGCTGTATAATAGAATGAGCTTAGCTGGACTTTTGTCTAATTTCATCACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAACCGGGTTAGCGAAGGTCTTGCGGCCATGGCAGTAATGATAAGGAGATGTTATATTCCTGATATAGTGACATATACGTCCTTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTATGAGAATGCAAAAATTGGGTTGTAGGCCAAATGTGATTACTTATGGTACTTTAATGAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATGCTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAATACCATTATAGATAGGCTCTGTAAAGAAGAACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATGCGTCCAGATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAATGTCTATTCAATGAGATGGTGGATCATGGTGTTCAACCAAATGTGGTTACTTATTGTACTTTAATCAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATACTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCTTGATGTTATTTGTTATAGTACCATTATAGATGAGCTCTGTAAAGAAGGACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATCCGTCCAAATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAACGTCTAATCAATGAGATGGTGGATCATGGTGTTCAACCAGATTTGGTCACATTTAATGTGTTGATGGATATGTTTTGCAAGGCAGGAAAGGTTAATGAGGCTAAGGAGTTGCTAGAAGTGATGATTCAGAGAGGTAATGTTCCTGATTTGGTTAGTTATAATACATTGATGGAAGGGTTATGTTTGGTTGGCGACCTAAACAGTGCAAGAGATCTATTTGTTAATATGCGAAGTCAGGGGTGTGAACCTAATGTCATTAGCTACACTGTGCTAATCAATGGGTTTTGCAAAAATAGGAAGGTGGAAGAAGCAAGGAAGCTTTACAATGAAATGCTTGAAGTGGGAATTAAGCCATCTTTGATTACATACAGTACCTTGTTAACGGGTCTCTTTCAGGCAGGCAAAGTTGATGATGCAAAGAAAATATTTGGTGTCATTAAAGCTCATGGTCTGACACCAGATTCAATTACATTTAGTATTTTCTTAGATGGGCTGTGTAGGAATGATTGTTTGGTTGAAGCAGTGGAGTTTTTTAATGGGCTATCATACAACTTGAAATTGAACGTTGTTATCTTTAATAGTCTTATCAATGGTTTATGTAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTTGACACATTGTCCCTTGAGGGGCTTCTACCAGATGTTGCAGCTTATAACATTTTGATCCAGGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTACTTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACGAGAGGAAGTGGTTAAACTTCTGCATAAAATGGTTCAAAAAAATGTGTCCCCAGATGATTCCACTTGCACCGTAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGCTCTGTTGGTTGAGCTTGTTGCAACAAAGTGGTTTCGATTTCACCCCACCGACGAGGAGATTGTGCGCTATTATCTTAGGCGCAAGGTTTCCGGCAAGCCCATCGGCTTTGATGTCATCTCCGTCATTGACATATACAAATCGGAGCCGTGGGACCTTCCTGAGAAGTCGAAGCTTAGGACTAGGGACCTGGAGTGGTACTTTTTTAGTCCTTTGGATAAGAAGTATGGCTATGGTTCGAGGACGAATAAAGCTACCGAAAAAGGGTACTGGAAGACGACTGGGAAGGATCGGCCGGTACGTCATAACGCCCGAGTAGTTGGGATGAAGAAGACTCTTGTTTACCACAGCGGGCGGGCGCCTCGCGGAGCTCGTAGTAATTGGGTGATGCATGAATACAAATTAACGGATGAGGACTTGGAGAAAACTGGGATTGTGCAGGATGCTTTTGTGCTTTGTAGGATATTTCAAAAGAGTGGTTCGGGGCCAAAGAATGGAGAACAATATGGAGCTCCATTTATCGAAGAGGAGTGGGAGGATGATGAAGAGTTAACTCTGCCTGGCGAGGAGGTTGTGGTCAATGAGGGGTTAGTTAATCTCGATGATGATATGCATTTTGAAGTGGATGACATTGCTCAGCAGTATTTTGATGGAGGACTTCCATTTGAATACGATCAACTTCCATCGAACTATCCTGAAGATGCAACCAATCATGTTGAGCTGCCCAATGTGCTTGTTGAAAATGATAATAAACCAGATGTATGTGTAGGCGATACATTGGACCTACACCATAACCACGGATTCTTTCAATTACCAGAGCAATATGGAATGGGTGGGAGTTCTGGAAAAGATGAGTGTTTTGCTGAATCAAGTGGTAATCTTGCTGAATCAAGTGATAATCTTAAGGATGAGGATATTGATTACTTACTCTATGAGCCTTACCCAAGTGGTTCGGATGATCTGGCCCTCAATGAGGAATCGTTCCTAGAGGCTAATGATCTTTCAAATCCAGTTGAAACTGATCCAATTGGTATCGACGTGCTTGAAGAATATCTTACATTCTTTGATGCAGATGATGACAACTTTCAGTTGTCCTTTGACCCAACAGAACTTTTGGGTAGTGAAGAACCTATTTCTGGCCAAACAATTCCTGAAGAGATTCAATCACCATTCCTCAAACGTGTCAGTCACCTGTTGGGCGACATCCCTGCACCTCCTGCATTTGCTTCTGAGTATCCATCAAAGGACATGGCCATTCGGCTCAACTCAACAGCTGAAACTTCCAGTTCAGTTCATATGACTGCTGGAATGATCCATATAAGAAACTTGACATCAAATGGGGATCTGCTTTTTGACACATTGTCCCTTGAAGGGCTTCTACCAGATGTTGCAACTTATAACATTTTGATCCAGGGGTGTTGTAGAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTAATTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACAAGAGGAAGTGGTTAAACTTCTGCATAGAATGGTTCAGAAAAATGTTTCCCCAGATGCTTCCACTTGCACGATAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGGTTGA

Coding sequence (CDS)

ATGGAAAAGTTCAATAGAGGGATTTCGTTTCAAGATCGCCTTCGGAAGTTCCTACAGAATTGCAAGACAGGTAATGCTACCGCCACTGATGCATTTCACTGCTTTGACCTAATGATGCTGGCAAGACCTACCCCTTCCATGTCTTCATTCAATATTTTACTTGGTGGGCTTGCTAAGATTAAGCATTATTCTGAAGTTTTTCAGCTGTATAATAGAATGAGCTTAGCTGGACTTTTGTCTAATTTCATCACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAACCGGGTTAGCGAAGGTCTTGCGGCCATGGCAGTAATGATAAGGAGATGTTATATTCCTGATATAGTGACATATACGTCCTTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTATGAGAATGCAAAAATTGGGTTGTAGGCCAAATGTGATTACTTATGGTACTTTAATGAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATGCTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCCTAATGTTATTTGTTATAATACCATTATAGATAGGCTCTGTAAAGAAGAACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATGCGTCCAGATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAATGTCTATTCAATGAGATGGTGGATCATGGTGTTCAACCAAATGTGGTTACTTATTGTACTTTAATCAAGGGCCTTTGTCAAACAGGTAATACTGACATTGCACTTAAGTTGCATGAGGAAATACTCAGTGGTACTGGTCGATATGGCATTAGTTGTAAGCTTGATGTTATTTGTTATAGTACCATTATAGATGAGCTCTGTAAAGAAGGACGGGAAGACAAGGCGAGGGAACTTTTTGAGGAAATGAAAGCGCAGGGAATCCGTCCAAATGTTATTTCTTATAACTCCTTGATTCATGGATTTTGCTCTGGTGGAAAGTGGGAGGAGGCTAAACGTCTAATCAATGAGATGGTGGATCATGGTGTTCAACCAGATTTGGTCACATTTAATGTGTTGATGGATATGTTTTGCAAGGCAGGAAAGGTTAATGAGGCTAAGGAGTTGCTAGAAGTGATGATTCAGAGAGGTAATGTTCCTGATTTGGTTAGTTATAATACATTGATGGAAGGGTTATGTTTGGTTGGCGACCTAAACAGTGCAAGAGATCTATTTGTTAATATGCGAAGTCAGGGGTGTGAACCTAATGTCATTAGCTACACTGTGCTAATCAATGGGTTTTGCAAAAATAGGAAGGTGGAAGAAGCAAGGAAGCTTTACAATGAAATGCTTGAAGTGGGAATTAAGCCATCTTTGATTACATACAGTACCTTGTTAACGGGTCTCTTTCAGGCAGGCAAAGTTGATGATGCAAAGAAAATATTTGGTGTCATTAAAGCTCATGGTCTGACACCAGATTCAATTACATTTAGTATTTTCTTAGATGGGCTGTGTAGGAATGATTGTTTGGTTGAAGCAGTGGAGTTTTTTAATGGGCTATCATACAACTTGAAATTGAACGTTGTTATCTTTAATAGTCTTATCAATGGTTTATGTAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTTGACACATTGTCCCTTGAGGGGCTTCTACCAGATGTTGCAGCTTATAACATTTTGATCCAGGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTACTTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACGAGAGGAAGTGGTTAAACTTCTGCATAAAATGGTTCAAAAAAATGTGTCCCCAGATGATTCCACTTGCACCGTAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGCTCTGTTGGTTGAGCTTGTTGCAACAAAGTGGTTTCGATTTCACCCCACCGACGAGGAGATTGTGCGCTATTATCTTAGGCGCAAGGTTTCCGGCAAGCCCATCGGCTTTGATGTCATCTCCGTCATTGACATATACAAATCGGAGCCGTGGGACCTTCCTGAGAAGTCGAAGCTTAGGACTAGGGACCTGGAGTGGTACTTTTTTAGTCCTTTGGATAAGAAGTATGGCTATGGTTCGAGGACGAATAAAGCTACCGAAAAAGGGTACTGGAAGACGACTGGGAAGGATCGGCCGGTACGTCATAACGCCCGAGTAGTTGGGATGAAGAAGACTCTTGTTTACCACAGCGGGCGGGCGCCTCGCGGAGCTCGTAGTAATTGGGTGATGCATGAATACAAATTAACGGATGAGGACTTGGAGAAAACTGGGATTGTGCAGGATGCTTTTGTGCTTTGTAGGATATTTCAAAAGAGTGGTTCGGGGCCAAAGAATGGAGAACAATATGGAGCTCCATTTATCGAAGAGGAGTGGGAGGATGATGAAGAGTTAACTCTGCCTGGCGAGGAGGTTGTGGTCAATGAGGGGTTAGTTAATCTCGATGATGATATGCATTTTGAAGTGGATGACATTGCTCAGCAGTATTTTGATGGAGGACTTCCATTTGAATACGATCAACTTCCATCGAACTATCCTGAAGATGCAACCAATCATGTTGAGCTGCCCAATGTGCTTGTTGAAAATGATAATAAACCAGATGTATGTGTAGGCGATACATTGGACCTACACCATAACCACGGATTCTTTCAATTACCAGAGCAATATGGAATGGGTGGGAGTTCTGGAAAAGATGAGTGTTTTGCTGAATCAAGTGGTAATCTTGCTGAATCAAGTGATAATCTTAAGGATGAGGATATTGATTACTTACTCTATGAGCCTTACCCAAGTGGTTCGGATGATCTGGCCCTCAATGAGGAATCGTTCCTAGAGGCTAATGATCTTTCAAATCCAGTTGAAACTGATCCAATTGGTATCGACGTGCTTGAAGAATATCTTACATTCTTTGATGCAGATGATGACAACTTTCAGTTGTCCTTTGACCCAACAGAACTTTTGGGTAGTGAAGAACCTATTTCTGGCCAAACAATTCCTGAAGAGATTCAATCACCATTCCTCAAACGTGTCAGTCACCTGTTGGGCGACATCCCTGCACCTCCTGCATTTGCTTCTGAGTATCCATCAAAGGACATGGCCATTCGGCTCAACTCAACAGCTGAAACTTCCAGTTCAGTTCATATGACTGCTGGAATGATCCATATAAGAAACTTGACATCAAATGGGGATCTGCTTTTTGACACATTGTCCCTTGAAGGGCTTCTACCAGATGTTGCAACTTATAACATTTTGATCCAGGGGTGTTGTAGAGAAGGACAAGTAGAAAAGGCAGATGATTTGTTTCGTAAAATGGAAGAAAGTGGTTGTGCTCCCAATGTAATTAATTATAATTCACTTCTACGAGGTTTCTGCGAAAGTAATAAACAAGAGGAAGTGGTTAAACTTCTGCATAGAATGGTTCAGAAAAATGTTTCCCCAGATGCTTCCACTTGCACGATAGTCTTAGACATGCTTTCTAAAGATGAAAACTATCAGGAATGTCTGAACTTGCTTCCAACATTTCCTGGCCAAGAGTGTCGGGGTTGA

Protein sequence

MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECLNLLPTFPGQECRALLVELVATKWFRFHPTDEEIVRYYLRRKVSGKPIGFDVISVIDIYKSEPWDLPEKSKLRTRDLEWYFFSPLDKKYGYGSRTNKATEKGYWKTTGKDRPVRHNARVVGMKKTLVYHSGRAPRGARSNWVMHEYKLTDEDLEKTGIVQDAFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDEELTLPGEEVVVNEGLVNLDDDMHFEVDDIAQQYFDGGLPFEYDQLPSNYPEDATNHVELPNVLVENDNKPDVCVGDTLDLHHNHGFFQLPEQYGMGGSSGKDECFAESSGNLAESSDNLKDEDIDYLLYEPYPSGSDDLALNEESFLEANDLSNPVETDPIGIDVLEEYLTFFDADDDNFQLSFDPTELLGSEEPISGQTIPEEIQSPFLKRVSHLLGDIPAPPAFASEYPSKDMAIRLNSTAETSSSVHMTAGMIHIRNLTSNGDLLFDTLSLEGLLPDVATYNILIQGCCREGQVEKADDLFRKMEESGCAPNVINYNSLLRGFCESNKQEEVVKLLHRMVQKNVSPDASTCTIVLDMLSKDENYQECLNLLPTFPGQECRG

Homology

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BLAST of Spg039374 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 904.8 bits (2337), Expect = 8.1e-259
Identity = 463/685 (67.59%), Postives = 517/685 (75.47%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    ISF +RLR FLQNCKTGN TA++AF  FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEISFHERLRTFLQNCKTGNFTASEAFQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR +IP+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVICY+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA ELLEVMIQRGN PDL +YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANELLEVMIQRGNAPDLFTYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL+SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VGIKPS+I
Sbjct: 486 LVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKVDDAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EGLLP+V  Y+ILI G CKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGYCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV+KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLSKDE Y+ CLNLLPTFP QE R
Sbjct: 726 DMLSKDEKYRGCLNLLPTFPVQEYR 639

[Close]

BLAST of Spg039374 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 900.2 bits (2325), Expect = 2.0e-257
Identity = 461/685 (67.30%), Postives = 515/685 (75.18%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    ISF  RLR FLQNCKTGN T ++A   FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR +IP+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVI Y+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA ELLEVMIQRGNVPDL +YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL+SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VGIKPS+I
Sbjct: 486 LVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSMI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKV+DAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EGLLP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV+KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLSKDE Y+ CLNLLPTFP QE R
Sbjct: 726 DMLSKDEKYRGCLNLLPTFPVQEYR 639

[Close]

BLAST of Spg039374 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 899.8 bits (2324), Expect = 2.6e-257
Identity = 458/685 (66.86%), Postives = 513/685 (74.89%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    ISF +RLR FLQNCKTGN T ++A   FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR Y+P+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVICY+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA +LLEVMIQRGNVPDL  YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANKLLEVMIQRGNVPDLFIYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VG+KPS+I
Sbjct: 486 LVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGVKPSVI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKVDDAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EG LP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVNKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLS+DE Y+ CLNLLPTFP Q+ R
Sbjct: 726 DMLSEDEKYRGCLNLLPTFPVQDYR 639

[Close]

BLAST of Spg039374 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 899.0 bits (2322), Expect = 4.5e-257
Identity = 460/685 (67.15%), Postives = 515/685 (75.18%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    I F +RLR FLQNCKTGN T ++AF  FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR +IP+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVI Y+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA ELLEVMIQRGNVPDL +YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL+SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VGIKPS+I
Sbjct: 486 LVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKV+DAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EGLLP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV+KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLSKDE Y+ CLNLLP FP QE R
Sbjct: 726 DMLSKDEKYRGCLNLLPMFPVQEYR 639

[Close]

BLAST of Spg039374 vs. NCBI nr
Match: KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 899.0 bits (2322), Expect = 4.5e-257
Identity = 460/685 (67.15%), Postives = 515/685 (75.18%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    I F +RLR FLQNCKTGN T ++AF  FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR +IP+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVI Y+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA ELLEVMIQRGNVPDL +YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL+SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VGIKPS+I
Sbjct: 486 LVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKV+DAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EGLLP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV+KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLSKDE Y+ CLNLLP FP QE R
Sbjct: 726 DMLSKDEKYRGCLNLLPMFPVQEYR 639

[Close]

BLAST of Spg039374 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.8e-118
Identity = 231/673 (34.32%), Postives = 374/673 (55.57%), Query Frame = 0


Query: 5   NRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYS 64
           +R +S+++RLR  L + K     A DA   F  M+ +RP P++  F+ L   +AK K Y 
Sbjct: 51  DRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD 110

Query: 65  EVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLI 124
            V  L  +M L G+  N  TL+I++NC C   ++    +AM  +I+  Y P+ +T+++LI
Sbjct: 111 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 170

Query: 125 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGR 184
            GLC+E R+SEA                                                
Sbjct: 171 NGLCLEGRVSEAL----------------------------------------------- 230

Query: 185 YGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKW 244
                                        EL + M   G +PD+I+ N+L++G C  GK 
Sbjct: 231 -----------------------------ELVDRMVEMGHKPDLITINTLVNGLCLSGKE 290

Query: 245 EEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDV 304
            EA  L ++MV++G QPN VTY  ++  +C++G T +A++L  ++         + KLD 
Sbjct: 291 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER------NIKLDA 350

Query: 305 ICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINE 364
           + YS IID LCK G  D A  LF EM+ +GI  N+I+YN LI GFC+ G+W++  +L+ +
Sbjct: 351 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 410

Query: 365 MVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGD 424
           M+   + P++VTF+VL+D F K GK+ EA+EL + MI RG  PD ++Y +L++G C    
Sbjct: 411 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 470

Query: 425 LNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYST 484
           L+ A  +   M S+GC+PN+ ++ +LING+CK  ++++  +L+ +M   G+    +TY+T
Sbjct: 471 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 530

Query: 485 LLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN- 544
           L+ G  + GK++ AK++F  + +  + P+ +T+ I LDGLC N    +A+E F  +  + 
Sbjct: 531 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 590

Query: 545 LKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKAD 604
           ++L++ I+N +I+G+C A K++ AW+LF +L L+G+ P V  YNI+I G CK+G + +A+
Sbjct: 591 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 636

Query: 605 DLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDML 664
            LFRKMEE G AP+  TYN L+R         + VKL+ ++ +   S D ST  +V+DML
Sbjct: 651 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 636

Query: 665 SKDENYQECLNLL 677
           S     +  L++L
Sbjct: 711 SDGRLKKSFLDML 636

[Close]

BLAST of Spg039374 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 7.2e-117
Identity = 229/670 (34.18%), Postives = 369/670 (55.07%), Query Frame = 0


Query: 8   ISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVF 67
           +S+++RLR  + + K       DA   F+ M+ +RP P+   FN L   +A+ K Y  V 
Sbjct: 36  LSYKERLRNGIVDIK-----VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 95

Query: 68  QLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGL 127
                M L G+  +  T+ I++NC C   ++    + +    +  Y PD +T+++L+ G 
Sbjct: 96  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 155

Query: 128 CMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGI 187
           C+E R+SEA  L  RM                                            
Sbjct: 156 CLEGRVSEAVALVDRM-------------------------------------------- 215

Query: 188 SCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEA 247
                                         EMK    RPD+++ ++LI+G C  G+  EA
Sbjct: 216 -----------------------------VEMK---QRPDLVTVSTLINGLCLKGRVSEA 275

Query: 248 KCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICY 307
             L + MV++G QP+ VTY  ++  LC++GN+ +AL L  ++         + K  V+ Y
Sbjct: 276 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER------NIKASVVQY 335

Query: 308 STIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVD 367
           S +ID LCK+G  D A  LF EM+ +GI+ +V++Y+SLI G C+ GKW++  +++ EM+ 
Sbjct: 336 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 395

Query: 368 HGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNS 427
             + PD+VTF+ L+D+F K GK+ EAKEL   MI RG  PD ++YN+L++G C    L+ 
Sbjct: 396 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 455

Query: 428 ARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLT 487
           A  +F  M S+GCEP++++Y++LIN +CK ++V++  +L+ E+   G+ P+ ITY+TL+ 
Sbjct: 456 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 515

Query: 488 GLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKL 547
           G  Q+GK++ AK++F  + + G+ P  +T+ I LDGLC N  L +A+E F  +  + + L
Sbjct: 516 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 575

Query: 548 NVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLF 607
            + I+N +I+G+C A K++ AW LF +LS +G+ PDV  YN++I G CK+G + +AD LF
Sbjct: 576 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 618

Query: 608 RKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKD 667
           RKM+E GC P+  TYN L+R     +     V+L+ +M     S D ST  +V+DMLS  
Sbjct: 636 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 618

Query: 668 ENYQECLNLL 677
              +  L++L
Sbjct: 696 RLDKSFLDML 618

[Close]

BLAST of Spg039374 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 5.2e-115
Identity = 229/670 (34.18%), Postives = 364/670 (54.33%), Query Frame = 0


Query: 8   ISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVF 67
           +S+++RLR  + + K       DA   F  M  +RP P +  F+ L   +A+ K Y  V 
Sbjct: 38  VSYRERLRSGIVDIK-----EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL 97

Query: 68  QLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGL 127
            L  +M L G+  N  TL+I++NC C   ++S   +AM  +I+  Y PD VT+++LI GL
Sbjct: 98  DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 157

Query: 128 CMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGI 187
           C+E R+SEA  L  RM ++G +P +IT                                 
Sbjct: 158 CLEGRVSEALELVDRMVEMGHKPTLIT--------------------------------- 217

Query: 188 SCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEA 247
                                                       N+L++G C  GK  +A
Sbjct: 218 -------------------------------------------LNALVNGLCLNGKVSDA 277

Query: 248 KCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICY 307
             L + MV+ G QPN VTY  ++K +C++G T +A++L  ++           KLD + Y
Sbjct: 278 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER------KIKLDAVKY 337

Query: 308 STIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVD 367
           S IID LCK+G  D A  LF EM+ +G + ++I Y +LI GFC  G+W++  +L+ +M+ 
Sbjct: 338 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 397

Query: 368 HGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNS 427
             + PD+V F+ L+D F K GK+ EA+EL + MIQRG  PD V+Y +L++G C    L+ 
Sbjct: 398 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 457

Query: 428 ARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLT 487
           A  +   M S+GC PN+ ++ +LING+CK   +++  +L+ +M   G+    +TY+TL+ 
Sbjct: 458 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 517

Query: 488 GLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKL 547
           G  + GK++ AK++F  + +  + PD +++ I LDGLC N    +A+E F  +  + ++L
Sbjct: 518 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 577

Query: 548 NVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLF 607
           ++ I+N +I+G+C A K++ AW+LF +L L+G+ PDV  YNI+I G CK+G + +AD LF
Sbjct: 578 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 620

Query: 608 RKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKD 667
           RKMEE G +PN  TYN L+R         +  KL+ ++ +   S D ST  +V+DMLS  
Sbjct: 638 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 620

Query: 668 ENYQECLNLL 677
              +  L++L
Sbjct: 698 RLKKSFLDML 620

[Close]

BLAST of Spg039374 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 8.8e-115
Identity = 228/648 (35.19%), Postives = 354/648 (54.63%), Query Frame = 0


Query: 30  DAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMSLAGLLSNFITLNILL 89
           DA   F  M+ +RP PS+  FN LL  +AK+K +  V  L  +M    ++    T NIL+
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 90  NCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCR 149
           NC C  +++S  LA +  M++  Y P IVT +SL+ G C   RIS+A             
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV------------ 187

Query: 150 PNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVICYNTIIDRLCKEERE 209
                                                                       
Sbjct: 188 ------------------------------------------------------------ 247

Query: 210 DKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEMVDHGVQPNVVTYCTL 269
                L ++M   G RPD I++ +LIHG     K  EA  L + MV  G QPN+VTY  +
Sbjct: 248 ----ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 307

Query: 270 IKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDELCKEGREDKARELFEE 329
           + GLC+ G+TD+AL L  ++ +         + DV+ ++TIID LCK    D A  LF+E
Sbjct: 308 VNGLCKRGDTDLALNLLNKMEAA------KIEADVVIFNTIIDSLCKYRHVDDALNLFKE 367

Query: 330 MKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDLVTFNVLMDMFCKAGK 389
           M+ +GIRPNV++Y+SLI   CS G+W +A +L+++M++  + P+LVTFN L+D F K GK
Sbjct: 368 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 427

Query: 390 VNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVNMRSQGCEPNVISYTV 449
             EA++L + MI+R   PD+ +YN+L+ G C+   L+ A+ +F  M S+ C P+V++Y  
Sbjct: 428 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 487

Query: 450 LINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGKVDDAKKIFGVIKAHG 509
           LI GFCK+++VE+  +L+ EM   G+    +TY+TL+ GLF  G  D+A+K+F  + + G
Sbjct: 488 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 547

Query: 510 LTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKLNVVIFNSLINGLCKAGKLETAW 569
           + PD +T+SI LDGLC N  L +A+E F+ +  + +KL++ I+ ++I G+CKAGK++  W
Sbjct: 548 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 607

Query: 570 ELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESGCAPNVITYNSLLRGF 629
           +LF +LSL+G+ P+V  YN +I G C +  +++A  L +KM+E G  PN  TYN+L+R  
Sbjct: 608 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 633

Query: 630 CESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECLNLL 677
                +    +L+ +M       D ST  +V +ML      +  L++L
Sbjct: 668 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Spg039374 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 3.4e-114
Identity = 224/675 (33.19%), Postives = 370/675 (54.81%), Query Frame = 0


Query: 5   NRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYS 64
           +R +S++D+L   L   K     A DA   F  M+ +RP P++  FN L   +AK K Y 
Sbjct: 51  DRNLSYRDKLSSGLVGIK-----ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE 110

Query: 65  EVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLI 124
            V  L  +M   G+  +  TL+I++NC C   ++S   + M  +++  Y PD V + +L+
Sbjct: 111 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 170

Query: 125 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGR 184
            GLC+E R+SEA  L  RM ++G +P +IT                              
Sbjct: 171 NGLCLECRVSEALELVDRMVEMGHKPTLIT------------------------------ 230

Query: 185 YGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKW 244
                                                          N+L++G C  GK 
Sbjct: 231 ----------------------------------------------LNTLVNGLCLNGKV 290

Query: 245 EEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDV 304
            +A  L + MV+ G QPN VTY  ++  +C++G T +A++L  ++         + KLD 
Sbjct: 291 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER------NIKLDA 350

Query: 305 ICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINE 364
           + YS IID LCK+G  D A  LF EM+ +G + ++I+YN+LI GFC+ G+W++  +L+ +
Sbjct: 351 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 410

Query: 365 MVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGD 424
           M+   + P++VTF+VL+D F K GK+ EA +LL+ M+QRG  P+ ++YN+L++G C    
Sbjct: 411 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 470

Query: 425 LNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYST 484
           L  A  +   M S+GC+P+++++ +LING+CK  ++++  +L+ EM   G+  + +TY+T
Sbjct: 471 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 530

Query: 485 LLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN- 544
           L+ G  Q+GK++ AKK+F  + +  + PD +++ I LDGLC N  L +A+E F  +  + 
Sbjct: 531 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 590

Query: 545 LKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKAD 604
           ++L++ I+  +I+G+C A K++ AW+LF +L L+G+  D  AYNI+I   C++  + KAD
Sbjct: 591 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 638

Query: 605 DLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDML 664
            LFRKM E G AP+ +TYN L+R     +      +L+ +M       D ST  +V++ML
Sbjct: 651 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 638

Query: 665 SKDENYQECLNLLPT 679
           S  E  +  L++L T
Sbjct: 711 SSGELDKSFLDMLST 638

[Close]

BLAST of Spg039374 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 9.7e-258
Identity = 461/685 (67.30%), Postives = 515/685 (75.18%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    ISF  RLR FLQNCKTGN T ++A   FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR +IP+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVI Y+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA ELLEVMIQRGNVPDL +YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL+SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VGIKPS+I
Sbjct: 486 LVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSMI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKV+DAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EGLLP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV+KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLSKDE Y+ CLNLLPTFP QE R
Sbjct: 726 DMLSKDEKYRGCLNLLPTFPVQEYR 639

[Close]

BLAST of Spg039374 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 1.3e-257
Identity = 458/685 (66.86%), Postives = 513/685 (74.89%), Query Frame = 0


Query: 1   MEKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKI 60
           +EK    ISF +RLR FLQNCKTGN T ++A   FDLMMLA PTP+MSSFN+LLGGLAK 
Sbjct: 66  LEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKT 125

Query: 61  KHYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTY 120
           KHYSEV +LY RMSLAGLL N+ITLNILLNCLCNVNR+SEGLAAMA +IRR Y+P+IVTY
Sbjct: 126 KHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVPNIVTY 185

Query: 121 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLS 180
           TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTL+KGLCQTGNT+IALKLHEEML+
Sbjct: 186 TSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 245

Query: 181 GTGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCS 240
           GTGRYGISCKPNVICY+TIID LCK+ REDKARELFEEMKA+ M PDVISY+SLIHGFC+
Sbjct: 246 GTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCN 305

Query: 241 GGKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISC 300
           GGKWEEAKCLFNEMVD G+QPN                                      
Sbjct: 306 GGKWEEAKCLFNEMVDLGIQPNA------------------------------------- 365

Query: 301 KLDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKR 360
                                                                       
Sbjct: 366 ------------------------------------------------------------ 425

Query: 361 LINEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLC 420
                         VTFNVLMD+ CKAGKV EA +LLEVMIQRGNVPDL  YNTLM+G C
Sbjct: 426 --------------VTFNVLMDILCKAGKVIEANKLLEVMIQRGNVPDLFIYNTLMDGFC 485

Query: 421 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 480
           LV DL SAR+LF++M S+GCEPNVISY VLING+CKN KVEEA K+YNEML+VG+KPS+I
Sbjct: 486 LVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGVKPSVI 545

Query: 481 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 540
           TY+ LLTGLFQAGKVDDAKKIFGVI+AHGL P S T SIF+DGLC+NDCL+EA+E FN L
Sbjct: 546 TYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNEL 605

Query: 541 SYNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVE 600
           SYNLKL++ IFN LI+GLCKAGKLETAWE FD +S EG LP+V  Y+ILI GCCKEGQVE
Sbjct: 606 SYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTYSILIHGCCKEGQVE 639

Query: 601 KADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVL 660
           KA+DLFRKMEE+GC PNVITYN+LLRGF +SNKREEVV+LLH+MV KNV PD STCT+VL
Sbjct: 666 KANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVNKNVVPDASTCTIVL 639

Query: 661 DMLSKDENYQECLNLLPTFPGQECR 686
           DMLS+DE Y+ CLNLLPTFP Q+ R
Sbjct: 726 DMLSEDEKYRGCLNLLPTFPVQDYR 639

[Close]

BLAST of Spg039374 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 1.8e-256
Identity = 457/686 (66.62%), Postives = 514/686 (74.93%), Query Frame = 0


Query: 2   EKFNRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIK 61
           E+   GISFQDR R FLQNCKTGN TA +A   FDLM+  +PTP+MSSFN+LLGGLAKIK
Sbjct: 69  EELTTGISFQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFNLLLGGLAKIK 128

Query: 62  HYSEVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYT 121
           HYSEV  LY+RMSLAG+L N+ITLNILLNCLCNVNRVSEGLAAMA +IRR YIP+IVTYT
Sbjct: 129 HYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRRGYIPNIVTYT 188

Query: 122 SLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSG 181
           SLIKGLCMEHRISEATRLFMRMQKLGC PNVITYGTL+KGLCQTGNT+IALKLHEEML+G
Sbjct: 189 SLIKGLCMEHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIALKLHEEMLNG 248

Query: 182 TGRYGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSG 241
           TGRYGI+CKPNVICY+TIID LCK+  EDKARELFEEMKAQGM PDVISY+SLIHGFC G
Sbjct: 249 TGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSSLIHGFCYG 308

Query: 242 GKWEEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCK 301
           GKWEEAK LFNEMVDHGVQPNV                                      
Sbjct: 309 GKWEEAKSLFNEMVDHGVQPNV-------------------------------------- 368

Query: 302 LDVICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRL 361
                                                                       
Sbjct: 369 ------------------------------------------------------------ 428

Query: 362 INEMVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRG-NVPDLVSYNTLMEGLC 421
                        VTFNVLMDM CKAGKV EAKELLE+M+Q G N PDL +YNTLM+G C
Sbjct: 429 -------------VTFNVLMDMLCKAGKVIEAKELLELMVQGGNNAPDLFTYNTLMDGFC 488

Query: 422 LVGDLNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLI 481
           LVGDLNSAR+LF+NM ++GCEPNVISY VLING+CKN K+EEA KLYNEML+VGI+PS+I
Sbjct: 489 LVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKMEEAMKLYNEMLQVGIRPSVI 548

Query: 482 TYSTLLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL 541
           TY++LLTGLFQAG V DAKK+FGVI+A+GL P S T+S FLDGLC+NDCL+EA+E FNGL
Sbjct: 549 TYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFLDGLCKNDCLLEAIELFNGL 608

Query: 542 S-YNLKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQV 601
             YNLKLN+ IFN LI+GLCKAGKLETAWELFD  SLEGLLP+V  Y+I+I G CK+GQ+
Sbjct: 609 KPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLLPNVVTYSIMIHGLCKDGQL 643

Query: 602 EKADDLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVV 661
           EKA DLFRKMEE+GC PN+ITYN+L+RGF E+NK EEVV+LLH+MV+KNV PD STCT+V
Sbjct: 669 EKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVELLHRMVKKNVLPDASTCTIV 643

Query: 662 LDMLSKDENYQECLNLLPTFPGQECR 686
           LDMLS+DE YQECLNLLP FP QECR
Sbjct: 729 LDMLSEDEKYQECLNLLPRFPAQECR 643

[Close]

BLAST of Spg039374 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 1.1e-213
Identity = 386/668 (57.78%), Postives = 466/668 (69.76%), Query Frame = 0


Query: 17  FLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMSLA 76
           FL+NCKTGN TA  AFH FDLM+ + P   +SSFN LLGGLAKI HYS++F LYN+M LA
Sbjct: 10  FLRNCKTGNITAIQAFHFFDLMVRSYPISPISSFNRLLGGLAKINHYSQLFSLYNKMCLA 69

Query: 77  GLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRISEA 136
           GL  + +TLNIL+NCLCNVNRVSE LAA+A ++RR YIPDIVTY +LIKGLCMEHRISEA
Sbjct: 70  GLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHRISEA 129

Query: 137 TRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVICY 196
           TRLF+RMQKLGC PNV+TYGTL+KGLCQTGN +IALKLH+EML+ T +YGI+CKPN    
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPN---- 189

Query: 197 NTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEMVD 256
                                                                       
Sbjct: 190 ------------------------------------------------------------ 249

Query: 257 HGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDELCK 316
                                                          VI YS IID LCK
Sbjct: 250 -----------------------------------------------VISYSIIIDGLCK 309

Query: 317 EGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDLVT 376
            GRED+A+E FEEMKAQG+ PNVISY+SLIHGFC  GKW+E+K+L +EMVD GVQP+ VT
Sbjct: 310 VGREDEAKETFEEMKAQGMVPNVISYSSLIHGFCCAGKWDESKQLFDEMVDQGVQPNKVT 369

Query: 377 FNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVNMR 436
           F+VL+D  CK GKV EAK+LLE+MI+ G VP++ +YN+L++G C+VGDLNSAR+LFV+M 
Sbjct: 370 FSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVFTYNSLLKGFCMVGDLNSARELFVSMP 429

Query: 437 SQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGKVD 496
           S+GCEP+VISYTVLING+CK  KVEEA KLYN+ML VG +P++ITY  LLTGLF AGKV 
Sbjct: 430 SKGCEPDVISYTVLINGYCKTLKVEEAMKLYNKMLLVGKRPNVITYGALLTGLFLAGKVG 489

Query: 497 DAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL-SYNLKLNVVIFNSLI 556
           DAKK+F  +KAHG+  +S  +SIFLDGLC+N CL EA+E F  L SYN KL +  ++ LI
Sbjct: 490 DAKKLFSAMKAHGIAENSCIYSIFLDGLCKNGCLFEAMELFTKLKSYNFKLEIETYSCLI 549

Query: 557 NGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESGCA 616
           +GLCKAGKLETAWELF+ LS EGL P+V  YNI+I G CK G V+KA+ LF KMEE+GC 
Sbjct: 550 DGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIMISGFCKAGLVDKANILFEKMEENGCT 566

Query: 617 PNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECLNL 676
           P++ITY+ LLR FC+SNK EEVV+LLHKMVQ++VSPD S CT+V+DML KDE Y+ECL+L
Sbjct: 610 PSIITYDILLRRFCQSNKSEEVVRLLHKMVQRDVSPDVSICTIVVDMLCKDEKYKECLDL 566

Query: 677 LPTFPGQE 684
           LP FP QE
Sbjct: 670 LPRFPVQE 566

[Close]

BLAST of Spg039374 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 2.8e-212
Identity = 387/668 (57.93%), Postives = 464/668 (69.46%), Query Frame = 0


Query: 17  FLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMSLA 76
           FL+NCKTGN TAT AFH FDLM+ + P PS+SSF+ LLGGLAKIKHYS +F LYN+M LA
Sbjct: 10  FLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKMRLA 69

Query: 77  GLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRISEA 136
           GL  + ITLNIL+NCLCNVNRVSE LA MA ++RR YIP++VTYT+LIKGLCMEHRISEA
Sbjct: 70  GLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEA 129

Query: 137 TRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVICY 196
           TRLF+RMQKLGC PNV+TYGTL+KGLCQTGN +IALKLH+EML+ T +YGI+CKPNV  Y
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNY 189

Query: 197 NTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEMVD 256
           N                                                           
Sbjct: 190 N----------------------------------------------------------- 249

Query: 257 HGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDELCK 316
                                                                IID LCK
Sbjct: 250 ----------------------------------------------------IIIDGLCK 309

Query: 317 EGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDLVT 376
            GRED+A ELFEEMKAQG+ PNVISY+SLIHGFC   KWEE+KRL +EMVD GVQPD VT
Sbjct: 310 VGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQPDKVT 369

Query: 377 FNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVNMR 436
           F+VL+D  CK GKV EAK+L EVMIQRG VPDL  Y++LMEG C+VGDLNSAR+LFV+M 
Sbjct: 370 FSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSARELFVSMP 429

Query: 437 SQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGKVD 496
           S+GCEP+VISYTVLING+CK  KVEEA KLYNEML VG +P++ITY  LLTGLF AGKV 
Sbjct: 430 SKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALLTGLFLAGKVG 489

Query: 497 DAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGL-SYNLKLNVVIFNSLI 556
           DAKK+F  +KA G++ +S  + I LDGLC+N CL EA++ F  L SYN KL++  ++ LI
Sbjct: 490 DAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFKLDIETYSCLI 549

Query: 557 NGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESGCA 616
           +GLCK GKLETAWELF+ LS EGL P+V  Y+I+I G C+EGQV+KA+ L +KME +GC 
Sbjct: 550 DGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKMETNGCN 566

Query: 617 PNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECLNL 676
           PN+ITYN+L+RGF ESNK +EVV+LLH MV+K+V PD +TC++V+DML KDE YQECL+L
Sbjct: 610 PNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQECLDL 566

Query: 677 LPTFPGQE 684
           LP F  Q+
Sbjct: 670 LPRFSVQK 566

[Close]

BLAST of Spg039374 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 427.9 bits (1099), Expect = 2.7e-119
Identity = 231/673 (34.32%), Postives = 374/673 (55.57%), Query Frame = 0


Query: 5   NRGISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYS 64
           +R +S+++RLR  L + K     A DA   F  M+ +RP P++  F+ L   +AK K Y 
Sbjct: 51  DRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD 110

Query: 65  EVFQLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLI 124
            V  L  +M L G+  N  TL+I++NC C   ++    +AM  +I+  Y P+ +T+++LI
Sbjct: 111 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 170

Query: 125 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGR 184
            GLC+E R+SEA                                                
Sbjct: 171 NGLCLEGRVSEAL----------------------------------------------- 230

Query: 185 YGISCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKW 244
                                        EL + M   G +PD+I+ N+L++G C  GK 
Sbjct: 231 -----------------------------ELVDRMVEMGHKPDLITINTLVNGLCLSGKE 290

Query: 245 EEAKCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDV 304
            EA  L ++MV++G QPN VTY  ++  +C++G T +A++L  ++         + KLD 
Sbjct: 291 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER------NIKLDA 350

Query: 305 ICYSTIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINE 364
           + YS IID LCK G  D A  LF EM+ +GI  N+I+YN LI GFC+ G+W++  +L+ +
Sbjct: 351 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 410

Query: 365 MVDHGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGD 424
           M+   + P++VTF+VL+D F K GK+ EA+EL + MI RG  PD ++Y +L++G C    
Sbjct: 411 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 470

Query: 425 LNSARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYST 484
           L+ A  +   M S+GC+PN+ ++ +LING+CK  ++++  +L+ +M   G+    +TY+T
Sbjct: 471 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 530

Query: 485 LLTGLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN- 544
           L+ G  + GK++ AK++F  + +  + P+ +T+ I LDGLC N    +A+E F  +  + 
Sbjct: 531 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 590

Query: 545 LKLNVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKAD 604
           ++L++ I+N +I+G+C A K++ AW+LF +L L+G+ P V  YNI+I G CK+G + +A+
Sbjct: 591 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 636

Query: 605 DLFRKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDML 664
            LFRKMEE G AP+  TYN L+R         + VKL+ ++ +   S D ST  +V+DML
Sbjct: 651 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 636

Query: 665 SKDENYQECLNLL 677
           S     +  L++L
Sbjct: 711 SDGRLKKSFLDML 636

[Close]

BLAST of Spg039374 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 5.1e-118
Identity = 229/670 (34.18%), Postives = 369/670 (55.07%), Query Frame = 0


Query: 8   ISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVF 67
           +S+++RLR  + + K       DA   F+ M+ +RP P+   FN L   +A+ K Y  V 
Sbjct: 36  LSYKERLRNGIVDIK-----VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVL 95

Query: 68  QLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGL 127
                M L G+  +  T+ I++NC C   ++    + +    +  Y PD +T+++L+ G 
Sbjct: 96  GFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 155

Query: 128 CMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGI 187
           C+E R+SEA  L  RM                                            
Sbjct: 156 CLEGRVSEAVALVDRM-------------------------------------------- 215

Query: 188 SCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEA 247
                                         EMK    RPD+++ ++LI+G C  G+  EA
Sbjct: 216 -----------------------------VEMK---QRPDLVTVSTLINGLCLKGRVSEA 275

Query: 248 KCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICY 307
             L + MV++G QP+ VTY  ++  LC++GN+ +AL L  ++         + K  V+ Y
Sbjct: 276 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER------NIKASVVQY 335

Query: 308 STIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVD 367
           S +ID LCK+G  D A  LF EM+ +GI+ +V++Y+SLI G C+ GKW++  +++ EM+ 
Sbjct: 336 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 395

Query: 368 HGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNS 427
             + PD+VTF+ L+D+F K GK+ EAKEL   MI RG  PD ++YN+L++G C    L+ 
Sbjct: 396 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 455

Query: 428 ARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLT 487
           A  +F  M S+GCEP++++Y++LIN +CK ++V++  +L+ E+   G+ P+ ITY+TL+ 
Sbjct: 456 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 515

Query: 488 GLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKL 547
           G  Q+GK++ AK++F  + + G+ P  +T+ I LDGLC N  L +A+E F  +  + + L
Sbjct: 516 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 575

Query: 548 NVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLF 607
            + I+N +I+G+C A K++ AW LF +LS +G+ PDV  YN++I G CK+G + +AD LF
Sbjct: 576 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 618

Query: 608 RKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKD 667
           RKM+E GC P+  TYN L+R     +     V+L+ +M     S D ST  +V+DMLS  
Sbjct: 636 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 618

Query: 668 ENYQECLNLL 677
              +  L++L
Sbjct: 696 RLDKSFLDML 618

[Close]

BLAST of Spg039374 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-116
Identity = 229/670 (34.18%), Postives = 364/670 (54.33%), Query Frame = 0


Query: 8   ISFQDRLRKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVF 67
           +S+++RLR  + + K       DA   F  M  +RP P +  F+ L   +A+ K Y  V 
Sbjct: 38  VSYRERLRSGIVDIK-----EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVL 97

Query: 68  QLYNRMSLAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGL 127
            L  +M L G+  N  TL+I++NC C   ++S   +AM  +I+  Y PD VT+++LI GL
Sbjct: 98  DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 157

Query: 128 CMEHRISEATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGI 187
           C+E R+SEA  L  RM ++G +P +IT                                 
Sbjct: 158 CLEGRVSEALELVDRMVEMGHKPTLIT--------------------------------- 217

Query: 188 SCKPNVICYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEA 247
                                                       N+L++G C  GK  +A
Sbjct: 218 -------------------------------------------LNALVNGLCLNGKVSDA 277

Query: 248 KCLFNEMVDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICY 307
             L + MV+ G QPN VTY  ++K +C++G T +A++L  ++           KLD + Y
Sbjct: 278 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER------KIKLDAVKY 337

Query: 308 STIIDELCKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVD 367
           S IID LCK+G  D A  LF EM+ +G + ++I Y +LI GFC  G+W++  +L+ +M+ 
Sbjct: 338 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 397

Query: 368 HGVQPDLVTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNS 427
             + PD+V F+ L+D F K GK+ EA+EL + MIQRG  PD V+Y +L++G C    L+ 
Sbjct: 398 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 457

Query: 428 ARDLFVNMRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLT 487
           A  +   M S+GC PN+ ++ +LING+CK   +++  +L+ +M   G+    +TY+TL+ 
Sbjct: 458 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 517

Query: 488 GLFQAGKVDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKL 547
           G  + GK++ AK++F  + +  + PD +++ I LDGLC N    +A+E F  +  + ++L
Sbjct: 518 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 577

Query: 548 NVVIFNSLINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLF 607
           ++ I+N +I+G+C A K++ AW+LF +L L+G+ PDV  YNI+I G CK+G + +AD LF
Sbjct: 578 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 620

Query: 608 RKMEESGCAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKD 667
           RKMEE G +PN  TYN L+R         +  KL+ ++ +   S D ST  +V+DMLS  
Sbjct: 638 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 620

Query: 668 ENYQECLNLL 677
              +  L++L
Sbjct: 698 RLKKSFLDML 620

[Close]

BLAST of Spg039374 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 416.8 bits (1070), Expect = 6.3e-116
Identity = 228/648 (35.19%), Postives = 354/648 (54.63%), Query Frame = 0


Query: 30  DAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMSLAGLLSNFITLNILL 89
           DA   F  M+ +RP PS+  FN LL  +AK+K +  V  L  +M    ++    T NIL+
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 90  NCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCR 149
           NC C  +++S  LA +  M++  Y P IVT +SL+ G C   RIS+A             
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV------------ 187

Query: 150 PNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVICYNTIIDRLCKEERE 209
                                                                       
Sbjct: 188 ------------------------------------------------------------ 247

Query: 210 DKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEMVDHGVQPNVVTYCTL 269
                L ++M   G RPD I++ +LIHG     K  EA  L + MV  G QPN+VTY  +
Sbjct: 248 ----ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 307

Query: 270 IKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDELCKEGREDKARELFEE 329
           + GLC+ G+TD+AL L  ++ +         + DV+ ++TIID LCK    D A  LF+E
Sbjct: 308 VNGLCKRGDTDLALNLLNKMEAA------KIEADVVIFNTIIDSLCKYRHVDDALNLFKE 367

Query: 330 MKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDLVTFNVLMDMFCKAGK 389
           M+ +GIRPNV++Y+SLI   CS G+W +A +L+++M++  + P+LVTFN L+D F K GK
Sbjct: 368 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 427

Query: 390 VNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVNMRSQGCEPNVISYTV 449
             EA++L + MI+R   PD+ +YN+L+ G C+   L+ A+ +F  M S+ C P+V++Y  
Sbjct: 428 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 487

Query: 450 LINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGKVDDAKKIFGVIKAHG 509
           LI GFCK+++VE+  +L+ EM   G+    +TY+TL+ GLF  G  D+A+K+F  + + G
Sbjct: 488 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 547

Query: 510 LTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKLNVVIFNSLINGLCKAGKLETAW 569
           + PD +T+SI LDGLC N  L +A+E F+ +  + +KL++ I+ ++I G+CKAGK++  W
Sbjct: 548 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 607

Query: 570 ELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESGCAPNVITYNSLLRGF 629
           +LF +LSL+G+ P+V  YN +I G C +  +++A  L +KM+E G  PN  TYN+L+R  
Sbjct: 608 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 633

Query: 630 CESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECLNLL 677
                +    +L+ +M       D ST  +V +ML      +  L++L
Sbjct: 668 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of Spg039374 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 414.8 bits (1065), Expect = 2.4e-115
Identity = 231/663 (34.84%), Postives = 362/663 (54.60%), Query Frame = 0


Query: 15  RKFLQNCKTGNATATDAFHCFDLMMLARPTPSMSSFNILLGGLAKIKHYSEVFQLYNRMS 74
           R+ L+N  +      DA   F  M+ +RP PS+  FN LL  +AK+  +  V  L  +M 
Sbjct: 51  REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110

Query: 75  LAGLLSNFITLNILLNCLCNVNRVSEGLAAMAVMIRRCYIPDIVTYTSLIKGLCMEHRIS 134
             G+  +  T +I +NC C  +++S  LA +A M++  Y PDIVT +SL+ G C   RIS
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170

Query: 135 EATRLFMRMQKLGCRPNVITYGTLMKGLCQTGNTDIALKLHEEMLSGTGRYGISCKPNVI 194
           +A                                                          
Sbjct: 171 DAV--------------------------------------------------------- 230

Query: 195 CYNTIIDRLCKEEREDKARELFEEMKAQGMRPDVISYNSLIHGFCSGGKWEEAKCLFNEM 254
                               L ++M   G +PD  ++ +LIHG     K  EA  L ++M
Sbjct: 231 -------------------ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 290

Query: 255 VDHGVQPNVVTYCTLIKGLCQTGNTDIALKLHEEILSGTGRYGISCKLDVICYSTIIDEL 314
           V  G QP++VTY T++ GLC+ G+ D+AL L +++  G        + DV+ Y+TIID L
Sbjct: 291 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG------KIEADVVIYNTIIDGL 350

Query: 315 CKEGREDKARELFEEMKAQGIRPNVISYNSLIHGFCSGGKWEEAKRLINEMVDHGVQPDL 374
           CK    D A  LF EM  +GIRP+V +Y+SLI   C+ G+W +A RL+++M++  + P++
Sbjct: 351 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 410

Query: 375 VTFNVLMDMFCKAGKVNEAKELLEVMIQRGNVPDLVSYNTLMEGLCLVGDLNSARDLFVN 434
           VTF+ L+D F K GK+ EA++L + MI+R   PD+ +Y++L+ G C+   L+ A+ +F  
Sbjct: 411 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 470

Query: 435 MRSQGCEPNVISYTVLINGFCKNRKVEEARKLYNEMLEVGIKPSLITYSTLLTGLFQAGK 494
           M S+ C PNV++Y+ LI GFCK ++VEE  +L+ EM + G+  + +TY+TL+ G FQA  
Sbjct: 471 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 530

Query: 495 VDDAKKIFGVIKAHGLTPDSITFSIFLDGLCRNDCLVEAVEFFNGLSYN-LKLNVVIFNS 554
            D+A+ +F  + + G+ P+ +T++I LDGLC+N  L +A+  F  L  + ++ ++  +N 
Sbjct: 531 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 590

Query: 555 LINGLCKAGKLETAWELFDTLSLEGLLPDVAAYNILIQGCCKEGQVEKADDLFRKMEESG 614
           +I G+CKAGK+E  WELF  LSL+G+ P+V AYN +I G C++G  E+AD L +KM+E G
Sbjct: 591 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 631

Query: 615 CAPNVITYNSLLRGFCESNKREEVVKLLHKMVQKNVSPDDSTCTVVLDMLSKDENYQECL 674
             PN  TYN+L+R       RE   +L+ +M     + D ST  +V +ML      +  L
Sbjct: 651 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 631

Query: 675 NLL 677
           ++L
Sbjct: 711 DML 631

The following BLAST results are available for this feature:

BLAST of Spg039374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548637.1	8.1e-259	67.59	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp...	[more]
XP_022953742.1	2.0e-257	67.30	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C...	[more]
XP_022992036.1	2.6e-257	66.86	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]	[more]
KAG7014482.1	4.5e-257	67.15	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6575949.1	4.5e-257	67.15	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Spg039374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WKV3	3.8e-118	34.32	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q6NQ83	7.2e-117	34.18	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9ASZ8	5.2e-115	34.18	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q9SXD8	8.8e-115	35.19	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	3.4e-114	33.19	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of Spg039374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP31	9.7e-258	67.30	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
A0A6J1JSG4	1.3e-257	66.86	pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O...	[more]
A0A6J1DSW3	1.8e-256	66.62	pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti...	[more]
A0A5A7UUW8	1.1e-213	57.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3C8J0	2.8e-212	57.93	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Spg039374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12300.1	2.7e-119	34.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22470.1	5.1e-118	34.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12620.1	3.7e-116	34.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	6.3e-116	35.19	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G62910.1	2.4e-115	34.84	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 104..181 e-value: 1.3E-22 score: 82.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 184..296 e-value: 3.5E-36 score: 127.2 coord: 428..541 e-value: 3.8E-36 score: 127.1 coord: 1101..1248 e-value: 4.3E-32 score: 113.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 20..103 e-value: 3.0E-10 score: 41.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 297..427 e-value: 3.8E-43 score: 150.0 coord: 542..700 e-value: 2.8E-41 score: 143.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 29..483
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 697..820 e-value: 3.9E-34 score: 118.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 693..843 score: 54.957489
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 549..583 e-value: 4.7E-8 score: 30.7 coord: 264..290 e-value: 3.3E-4 score: 18.6 coord: 1186..1218 e-value: 2.5E-5 score: 22.2 coord: 118..152 e-value: 1.5E-8 score: 32.3 coord: 49..78 e-value: 7.2E-4 score: 17.6 coord: 153..180 e-value: 6.3E-5 score: 20.9 coord: 340..373 e-value: 2.2E-10 score: 38.0 coord: 305..339 e-value: 6.9E-10 score: 36.5 coord: 194..228 e-value: 9.4E-10 score: 36.1 coord: 83..116 e-value: 0.002 score: 16.2 coord: 480..513 e-value: 7.0E-6 score: 23.9 coord: 585..618 e-value: 1.3E-12 score: 45.1 coord: 375..408 e-value: 2.8E-8 score: 31.4 coord: 619..652 e-value: 1.8E-7 score: 28.9 coord: 445..478 e-value: 4.5E-11 score: 40.2 coord: 410..444 e-value: 2.4E-9 score: 34.8 coord: 229..263 e-value: 4.1E-11 score: 40.3 coord: 1150..1183 e-value: 3.4E-13 score: 46.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 226..275 e-value: 4.9E-20 score: 71.5 coord: 115..164 e-value: 1.6E-17 score: 63.4 coord: 581..629 e-value: 1.3E-19 score: 70.1 coord: 1146..1194 e-value: 1.6E-17 score: 63.4 coord: 45..94 e-value: 3.3E-8 score: 33.6 coord: 442..490 e-value: 2.2E-17 score: 63.0 coord: 337..386 e-value: 1.3E-17 score: 63.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 543..572 e-value: 7.0E-11 score: 41.7 coord: 509..538 e-value: 2.0E-6 score: 27.4 coord: 300..331 e-value: 9.4E-11 score: 41.3 coord: 406..436 e-value: 1.0E-7 score: 31.5 coord: 189..220 e-value: 2.8E-11 score: 42.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 151..181 score: 10.259834
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1182..1216 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 192..226 score: 13.065928
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 116..150 score: 13.065928
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 303..337 score: 13.668798
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 582..616 score: 14.786851
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 338..372 score: 14.43609
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 227..261 score: 14.600509
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 408..442 score: 12.726127
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 617..651 score: 12.605553
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1147..1181 score: 15.247226
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 373..407 score: 13.164578
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 46..80 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 443..477 score: 14.173018
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 547..581 score: 12.58363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 478..512 score: 11.114816
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 262..292 score: 9.656963
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 702..846 e-value: 5.1E-54 score: 184.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 697..843
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 297..538 coord: 1135..1241 coord: 29..290 coord: 186..436 coord: 543..676

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039374.1	Spg039374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding