Spg039341 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039341
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BTB/POZ domain-containing protein
Location	scaffold10: 45640212 .. 45641836 (+)
RNA-Seq Expression	Spg039341
Synteny	Spg039341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGCTCAGTCTGCAGCTCACTGCCGGTGATATTGCGGCCGCCGCGGAATACAATTTGCGGGTCGTGTTACGACGGAGCAAAGAGTTTGATCAATTTGATAAACAAGCTTGAAAATGAAAAGGCTATGAATAATAAAGCAGCTAATAATGGCTCTCCTGTTTCGCCACTTGGCTCCTCCTGTAAGGCAAGTTCTTCATTCTTTCCAATCTCTTTTCTCTCTCTCTCTTTCGTGCTCTTTTGAAATAAGTGTTTGAGATCATGTTTGGCTTTTGTAATCTACAAATTTTGAGTTGGACTATAGGTTAAACTTATAATAGGAATTTTGACTCTCAATTTTATATTTAATAGATCATTTGCATGCTCTATATTTAAAAATATATATATATTACGGAGATATTAGATACAAAATTTAAATTTCAAGTTTATTAGATATATTTTAAAGTTCAATGAATTTTTAAGCATAGAATTAAAAATTTAAACACTTATTATAAATTTTGTAAATTTTATGAATTTATTAAATACAAACTTGAAAGCAAGGGAATAAACCTGTAGTTTGACTTTGATTTTGTTTTTACTATTTTTAGTATTTCTCATATTAAGGGTGTCATTGGATTTAATGAATGTCAATCGCTTTAAAGATGATAAAAAGGTGGTGAACTATGTTAACATTTTTTTTTTAAAGTAAGTTGTGTTCTACGTTTTAATTGAGAGAAACAAAAAAAAATGAATTAGATGGATTTTTTTAGAGCTTATTTATTTCCATGTATTACACTAAGAAAATTATATAATTTTAATCGTTTAACAAAAATTACAACCAAAAAGTTATATATATATACCCATAGGATTTTGTTAAGATCTTCCTCAAAAAAAAGGTTAAGTTCATGACAAAGATGAGATGTTTGGGCTTCTTTTTTAAGAGGCTAGTTTTGGATAGATGTTAAATGGGCCAAGATTGTTCCATTTTACTCCATGAACAAAAAGAGAACATAGATAACCCATGAGGACCAAATGAAGTACATTTGGAATAAGTATGTGTGCCATGGTATAAGGGAATATATAATTTTGGGTACACTTTTGGTTTTCATTTTTCTTAATCCCATGCTCATGAATATAATTTTTTTTTTCTAGAAACAATATAATTAATGAGTTAGGATTTAAAATAAGTTTTTTTTTTTGTTTTTAGTATAATCAAGGTGAGAATAAGAATTCAAACTTTTTAATTTAAGAAAATGAATAAACCTTAACTGTTGAGTTGTGTTATCACGTTGGCACAAACCTCTGTGTTTTTTTTTGTTGGGTCCCAAAGCCTTTCGACTCCAAACAAACTATTGTGAGAAAGACTGAAGTCTTTGTTTTGAATTGGTTGGTTACTAAGAAAAAGAAAAACACTTCATGTGACAATAAAAAACAACCAATCTCGTGTATGTCCTTCCTACTTATTATATACGGTTGATGGTCAATTTTGGTCAGAGGAAACTCACCTGACCTTCACGTACCACCAACGGTAAATTTGTAGATGAGGGGGAAGATGTGGCCTGCAAAAGAGGAAACCTGCACACCGGTGTGGTGCTAGCCACACCACCTCCGATGCTTAAGTCAGAAAACGGAGAGAATAGCTAG

mRNA sequence

ATGGATTGCTCAGTCTGCAGCTCACTGCCGGTGATATTGCGGCCGCCGCGGAATACAATTTGCGGGTCGTGTTACGACGGAGCAAAGAGTTTGATCAATTTGATAAACAAGCTTGAAAATGAAAAGGCTATGAATAATAAAGCAGCTAATAATGGCTCTCCTGTTTCGCCACTTGGCTCCTCCTATGAGGGGGAAGATGTGGCCTGCAAAAGAGGAAACCTGCACACCGGTGTGGTGCTAGCCACACCACCTCCGATGCTTAAGTCAGAAAACGGAGAGAATAGCTAG

Coding sequence (CDS)

ATGGATTGCTCAGTCTGCAGCTCACTGCCGGTGATATTGCGGCCGCCGCGGAATACAATTTGCGGGTCGTGTTACGACGGAGCAAAGAGTTTGATCAATTTGATAAACAAGCTTGAAAATGAAAAGGCTATGAATAATAAAGCAGCTAATAATGGCTCTCCTGTTTCGCCACTTGGCTCCTCCTATGAGGGGGAAGATGTGGCCTGCAAAAGAGGAAACCTGCACACCGGTGTGGTGCTAGCCACACCACCTCCGATGCTTAAGTCAGAAAACGGAGAGAATAGCTAG

Protein sequence

MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGSSYEGEDVACKRGNLHTGVVLATPPPMLKSENGENS

Homology

[Close]

BLAST of Spg039341 vs. NCBI nr
Match: KAA0052030.1 (BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK04530.1 BTB/POZ domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 59

Query: 61 SY 63
          SY
Sbjct: 61 SY 59

[Close]

BLAST of Spg039341 vs. NCBI nr
Match: XP_011656427.1 (BTB/POZ domain-containing protein At3g56230 [Cucumis sativus] >KAE8646574.1 hypothetical protein Csa_005741 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 3.4e-16
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTIC SCYDGAK +INLINKL+N++   N   NN SPVSP+GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICVSCYDGAKCVINLINKLQNDRKPTN---NNVSPVSPIGS 58

Query: 61 S 62
          S
Sbjct: 61 S 58

[Close]

BLAST of Spg039341 vs. NCBI nr
Match: XP_016901975.1 (PREDICTED: BTB/POZ domain-containing protein At3g56230 isoform X2 [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 9.9e-16
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 58

Query: 61 S 62
          S
Sbjct: 61 S 58

[Close]

BLAST of Spg039341 vs. NCBI nr
Match: XP_008456756.1 (PREDICTED: BTB/POZ domain-containing protein At3g56230 isoform X1 [Cucumis melo])

HSP 1 Score: 93.6 bits (231), Expect = 9.9e-16
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 58

Query: 61 S 62
          S
Sbjct: 61 S 58

[Close]

BLAST of Spg039341 vs. NCBI nr
Match: XP_023549749.1 (BTB/POZ domain-containing protein At3g56230 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14
Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK LINLINKL+++K  N    N  S    L +
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCLINLINKLQSDKPANKATINVASSCKTLMN 60

Query: 61 S-------------------YEGEDVACKRGNLHTGVVL 81
          +                   Y GE  A  R  +HT + L
Sbjct: 61 ASKWIIDLKNREEELEEKIVYLGEFSAAFRHRIHTDIEL 99

[Close]

BLAST of Spg039341 vs. ExPASy Swiss-Prot
Match: Q9LYL9 (BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana OX=3702 GN=At3g56230 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.7e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLE------NEKAMNNKAANNGSP 57
          MDCS+C+++P ILRPPRNTICGSCY+GA++ I L+ KLE      ++K+ +N   NNGS 
Sbjct: 1  MDCSICTTMPSILRPPRNTICGSCYEGARTTIALLKKLEGSKEDRHDKSNHNSTINNGSS 60

[Close]

BLAST of Spg039341 vs. ExPASy TrEMBL
Match: A0A5A7UA22 (BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001510 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.4e-17
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 59

Query: 61 SY 63
          SY
Sbjct: 61 SY 59

[Close]

BLAST of Spg039341 vs. ExPASy TrEMBL
Match: A0A1S3C429 (BTB/POZ domain-containing protein At3g56230 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496602 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.8e-16
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 58

Query: 61 S 62
          S
Sbjct: 61 S 58

[Close]

BLAST of Spg039341 vs. ExPASy TrEMBL
Match: A0A1S4E1W6 (BTB/POZ domain-containing protein At3g56230 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496602 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.8e-16
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK +INLINKL+N++   N   +N SPVS +GS
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCVINLINKLQNDRKPTN---DNVSPVSQIGS 58

Query: 61 S 62
          S
Sbjct: 61 S 58

[Close]

BLAST of Spg039341 vs. ExPASy TrEMBL
Match: A0A6J1FL36 (BTB/POZ domain-containing protein At3g56230 OS=Cucurbita moschata OX=3662 GN=LOC111445209 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 48/99 (48.48%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICG+CYDGAK LINLINKL+++K +N    N  S    L +
Sbjct: 1  MDCSICSSLPVILRPPRNTICGACYDGAKCLINLINKLQSDKPVNKATINVASSCKTLMN 60

Query: 61 S-------------------YEGEDVACKRGNLHTGVVL 81
          +                   Y GE  A  R  +HT + L
Sbjct: 61 ASKWIIDLKNREEELEEKIVYLGEFSAAFRHRIHTDIEL 99

[Close]

BLAST of Spg039341 vs. ExPASy TrEMBL
Match: A0A6J1JTP1 (BTB/POZ domain-containing protein At3g56230 OS=Cucurbita maxima OX=3661 GN=LOC111489645 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-14
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLENEKAMNNKAANNGSPVSPLGS 60
          MDCS+CSSLPVILRPPRNTICGSCYDGAK LINLINKL+++K  N    N  S    L +
Sbjct: 1  MDCSICSSLPVILRPPRNTICGSCYDGAKCLINLINKLQSDKPANKATINVASSCKTLMN 60

Query: 61 SYE 64
          + E
Sbjct: 61 ASE 63

[Close]

BLAST of Spg039341 vs. TAIR 10
Match: AT3G56230.1 (BTB/POZ domain-containing protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MDCSVCSSLPVILRPPRNTICGSCYDGAKSLINLINKLE------NEKAMNNKAANNGSP 57
          MDCS+C+++P ILRPPRNTICGSCY+GA++ I L+ KLE      ++K+ +N   NNGS 
Sbjct: 1  MDCSICTTMPSILRPPRNTICGSCYEGARTTIALLKKLEGSKEDRHDKSNHNSTINNGSS 60

The following BLAST results are available for this feature:

BLAST of Spg039341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052030.1	1.5e-16	74.19	BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK04530.1 BTB/POZ...	[more]
XP_011656427.1	3.4e-16	75.41	BTB/POZ domain-containing protein At3g56230 [Cucumis sativus] >KAE8646574.1 hypo...	[more]
XP_016901975.1	9.9e-16	73.77	PREDICTED: BTB/POZ domain-containing protein At3g56230 isoform X2 [Cucumis melo]	[more]
XP_008456756.1	9.9e-16	73.77	PREDICTED: BTB/POZ domain-containing protein At3g56230 isoform X1 [Cucumis melo]	[more]
XP_023549749.1	2.4e-14	49.49	BTB/POZ domain-containing protein At3g56230 isoform X1 [Cucurbita pepo subsp. pe...	[more]

BLAST of Spg039341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYL9	3.7e-13	54.84	BTB/POZ domain-containing protein At3g56230 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Spg039341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UA22	7.4e-17	74.19	BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C429	4.8e-16	73.77	BTB/POZ domain-containing protein At3g56230 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A1S4E1W6	4.8e-16	73.77	BTB/POZ domain-containing protein At3g56230 isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1FL36	1.5e-14	48.48	BTB/POZ domain-containing protein At3g56230 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JTP1	2.0e-14	66.67	BTB/POZ domain-containing protein At3g56230 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Spg039341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56230.1	2.6e-14	54.84	BTB/POZ domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039341.1	Spg039341.1	mRNA