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Spg039221 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATTACACAAATCAATGTCAGAGTCCCCAAAAGTTATTGGGATGAACGACGACGAGACCCCGAAATCCCCTTTCACTTGGTTCTCTTTCCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGATCAACGACGGCAAGAAACCACCGGCTGCGGCGGTTGATGAAAACCGGAAGGTTGGCGACGACTCGCAGAAGCCCGAGTTTGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCTCTTCGGTGGAGGCTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTTTGTGTTCTATTTCGTTTTTGTGGAAAGTGGATGAATTAGAACTTTCTACTGTGGTTTGAAACTCGTTGTGTTTGTGGATTTGACTGAGCTGGGAATGATTGTTGACTGTTAAAGCATCTCGTTAATGGTGAATTGGAGTGTAGAGAGCGTTTGCCTTTTCTGTGTTTGTACTTTCATCTTTCGGCTGCCTAGTTTTCCCCTCTTTTTTATATATTCTTGATTGGTTTAGTCGATAGCGTTCTTAAGATGTTCGGAAACGTGTAAGGATTTCTCTCATGTACATCGTACATAGCAAATAGAGTACTAAACCTCAGCAGTCGGTTGAGTTTTACCAAAAATTGCAATACAGAAACTCAATTTTGACAGCTTTTGGGAATTTCCAATTTTCATCGGGATAGATAGAACAGAAAGGAACCTGGATGCCTGATGCAATATGGATTTATTTTTCTTCCAATTGCCTTAGTATTTCAGTGTCCCATCCAGCTGCTATCATCAGGTTATCAATACTAGTTCCGTGGTGTTCTATCTCTTCAGATTGAATTGGCTCTTTTTATTTCTAATCATTGAGAACTTGAAAGCTAGTCTTAGAAAGTTTTCGAAAATGAAGGGTTGATTAAGTATCTCTAGGGAGCAAAAGAGAGAAGAAATGAGAAGAAGGCTCTGCTTATAATCTGTAGGGGTGAGGCAAGCCTACTGTACATGTATATATTCAAAGAATGCATCCATTTAAAAGTATGGAAGGACTGGGGCCAGGGCCACTTAACTTTTAGTACAAACGTAAACTGAGGGATTGTAAAGGTATCCACTATCAGGGGTTGTTCATAAAGGAGAGGATCCCATTATTGTCAGCATCCTACTTTCATATTGAGTCTTTTACATGTTTTTATCCTCTTGCCGTGCTGACTTCGTTGGAACTTGAGCTTTTCTGGTTCCTTGCTTATAATATGAATCATTTCATTTGCATTAGGTATATGCTCTTGGTGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTCCAGATGATGAGGATGAGGATTCCAGGGACACATAGTTTTGTGTTTGCCATGAACAGCCTTGATAAATCATAAATGTTATAGTGAGCTCTACATCTTTAGTGCTAGAATCAATCTTGAGTTTATCGGTGATTTGTAAGTTCTGAGTTAAATGAGTCATTTCCCAACCCTTTGTCAATCCTTGAACATGATCTTAGTATTAAATCAAATCTGTCTCCTTGAAGTTCTCTAACTCATTGGTGCAAAAGCAACAATATTTAATGTTAATAAGAGGCTTCCTGCTTGCGCTTCTAAACAAATGAGGTATTGCATCTGTGTATAATCTCAAGAAAAGGAATCTTGTTTAATCTACCAATGTATAATATACTTCTCTTTTTAATAATATGCATGTGCAGTTACTGAAA ATGTCAGAGTCCCCAAAAGTTATTGGGATGAACGACGACGAGACCCCGAAATCCCCTTTCACTTGGTTCTCTTTCCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGATCAACGACGGCAAGAAACCACCGGCTGCGGCGGTTGATGAAAACCGGAAGGTTGGCGACGACTCGCAGAAGCCCGAGTTTGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCTCTTCGGTGGAGGCTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGTGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTCCAGATGATGAGGATGAGGATTCCAGGGACACATAG ATGTCAGAGTCCCCAAAAGTTATTGGGATGAACGACGACGAGACCCCGAAATCCCCTTTCACTTGGTTCTCTTTCCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGATCAACGACGGCAAGAAACCACCGGCTGCGGCGGTTGATGAAAACCGGAAGGTTGGCGACGACTCGCAGAAGCCCGAGTTTGTCAGGTTTCCTAAAGCAGAGTTGGCCGTCTCTTCGGTGGAGGCTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTTATCTGGCAGGTATATGCTCTTGGTGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTCCAGATGATGAGGATGAGGATTCCAGGGACACATAG MSESPKVIGMNDDETPKSPFTWFSFLPKFDFRLPLPINDGKKPPAAAVDENRKVGDDSQKPEFVRFPKAELAVSSVEAEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPQRRPDDEDEDSRDT Homology
BLAST of Spg039221 vs. NCBI nr
Match: XP_023550789.1 (uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.8 bits (569), Expect = 8.7e-55 Identity = 109/132 (82.58%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Spg039221 vs. NCBI nr
Match: XP_023550786.1 (uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.8 bits (569), Expect = 8.7e-55 Identity = 109/132 (82.58%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Spg039221 vs. NCBI nr
Match: KAG6578783.1 (hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016314.1 hypothetical protein SDJN02_21421 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.1 bits (562), Expect = 5.6e-54 Identity = 108/132 (81.82%), Postives = 115/132 (87.12%), Query Frame = 0
BLAST of Spg039221 vs. NCBI nr
Match: XP_022993210.1 (uncharacterized protein LOC111489298 [Cucurbita maxima] >XP_022993211.1 uncharacterized protein LOC111489298 [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 9.6e-54 Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Spg039221 vs. NCBI nr
Match: XP_022938932.1 (uncharacterized protein LOC111444995 [Cucurbita moschata]) HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53 Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Spg039221 vs. ExPASy TrEMBL
Match: A0A6J1JVP7 (uncharacterized protein LOC111489298 OS=Cucurbita maxima OX=3661 GN=LOC111489298 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54 Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of Spg039221 vs. ExPASy TrEMBL
Match: A0A6J1FFF8 (uncharacterized protein LOC111444995 OS=Cucurbita moschata OX=3662 GN=LOC111444995 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53 Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Spg039221 vs. ExPASy TrEMBL
Match: A0A0A0LSR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 9.7e-52 Identity = 102/133 (76.69%), Postives = 114/133 (85.71%), Query Frame = 0
BLAST of Spg039221 vs. ExPASy TrEMBL
Match: A0A5D3CKR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00550 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 101/132 (76.52%), Postives = 112/132 (84.85%), Query Frame = 0
BLAST of Spg039221 vs. ExPASy TrEMBL
Match: A0A1S3C3J3 (uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 101/132 (76.52%), Postives = 112/132 (84.85%), Query Frame = 0
BLAST of Spg039221 vs. TAIR 10
Match: AT3G52230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14 Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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