Spg039052 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg039052
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Locationscaffold12: 4730039 .. 4734688 (-)
RNA-Seq ExpressionSpg039052
SyntenySpg039052
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCTTTCTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGTGACCAGATCTCAGATGCAGTTCTTGATGCTTGCCTTGCCCAAGATCCTGACAGCAAGGTTGCTTGTGAGACCTGCACCAAGACCAACATGGTTATGGTTTTTGGAGAGATTACAACCAAAGCCAACGTGGACTACGAGAAGATCGTCCGAGACACTTGCCGGTCCATCGGATTCATCTCAGATGATGTTGGTCTCGATGCCGACAACTGCAAGGTCCTGGTCAACATCGAGCAGCAGAGTCCTGATATTGCCCAAGGTGTCCATGGTCATTTCACTAAGCGACCTGAGGACATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTCATGCCCCTGAGTCATGTCCTTGCAACGAAGCTCGGCGCTCGCCTCACTGAGGTGAGGAAGAATGGCACCTGCTCATGGTTGAGACCTGACGGCAAGACCCAAGTTACTGTGGAGTATTACAATGATAATGGTGCCATGGTCCCTGTTCGAGTCCACACAGTTCTCATCTCCACCCAGCACGATGAAACCGTCACGAATGATGAGATTGCAGCTGACCTTAAGGAGCATGTGATCAAGCCTGTTGTCCCTGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTCAATCCCTCTGGCCGCTTTGTCATCGGTGGTCCGCACGGAGATGCAGGTCTCACCGGTCGTAAGATCATCATCGACACTTACGGTGGATGGGGAGCTCACGGTGGAGGTGCTTTCTCCGGAAAGGACCCAACCAAAGTGGACAGAAGTGGTGCTTACATTGTCAGGCAGGCCGCCAAGAGCATTGTAGCCAGCGGACTCGCTCGAAGGGCAATTGTGCAGGTCTCTTACGCCATTGGTGTGCCTGAGCCATTGTCAGTCTTCGTCGACACATATGGAACCGGAAAGATCCCGGACAAAGAGATTCTGGAGATCGTGAAGGAGAACTTCGACTTCAGACCCGGAATGATCACCATCAACCTGGATTTGAAGAGGGGTGGCAATGGCAGGTTCTTGAAGACGGCCGCATATGGACACTTTGGAAGGGATGACCCGGACTTCACCTGGGAAGTTGTGAAGCCCCTCAAATGGGAGAAGCCTCAATCTTGAGATGTGTTGGTGTATTCAGAGCCGCCATGGAAATTGGAAAACGGAGCTTTGTTACTACTGGATGAATAATGTGTGTGCTGCCCTTATAAGCTAAGGTAGTAGCTGCTAATGTTGTTCTATTATTACATGTGAGATCCTTTTTTTTCCCTTATTTTCTTGTTGCCTATAAACCTTCATGATGTATCCTTTTTGTACCAGTTCTTTTATAATATGATAGAGGGGACTCTGTCCAAGTTCAAATTCTTGATTGATACTGAAAGTAAATGACTGTGTTGATTGTGACAATAATTCATATTCATATTGGTAGGCCTTTGGCAGGGTTATAGGTGTCTCTTTGGCTGTATCACCTTTATTTTGTGTAAGTAAAGATCTTAGTTGAAACTAATTAATAGTCATCCCTTTTAAAAAAATTAAAAGTGTTGTTTCTTTCTATACAGATTATGGAAGGGTTTCCAAAGAATAAGTACCTTTTAACTTTTAATATTGATTCTATATTGTCTCTACTATAAAGTATAAACCGTGATTATTTAGCATGATGTAGCATATTTGGATTAAAAAAATGTGTTCTTACTTTTAATGTGGGTTCTAAAATGTCTCTAATATGAACCTGCGAATGATGATTTTATATGTAGCCTATCCCAAATGGTGGATATTTAAATTTTCACCCTCACCATCATACTGTTGAACTAATATAAAGTACTTTAAAATATTTATATATATATATATATATATATATATATATATAAATAAAGTAAAGATATTAATGTCAAAAATTTATTAGTAATGATATTAATGTCAAAATTTATATGTCGATGTAAAAAAAGTCAGACCTAATTGAGATTTTTTAAAGTTTAGTGATTAAATATACCCAGATTCTTTTTCAAAAAATATATATATATATATATACCCCAGAATCAAAATTCAATTACAATTTTTTTTTTCTTTCTATTGAGTTCAATTAGAAGTAGAGAGATTCTAACCTCCAACATTTGATGAGGTAAATATTAAATATTATCTTGACTAATTAAGTTAGGTTCATGACAGACATCAATACTATGTTGAAATAGCAGTACCATTTTATAAAATACATAAAATATCTTTGCAGTTAAATTACAATTTAGTCCCTAAATTTTTAAGTTTGTGTCTATTTGGCCTCGAACTTTAAAATGTGTCTAATGGGTCACTAAACTTTCAAGTTTGTATCTATTTGGCCCATAAACTTTAAAAAGTGTTTAATAGGTTCTTGAACTTTGAAATTTGTACTTATTTGACTCCTGAACTTTAAAAGATGTCTAATAGGTCCTTAGACTTTTAACTTTGTCTAATAGATCTCTAAATTTTCAATTTTGTATAAATCCTTGACTTCTCCTAGTTTTTTAAAATTCATGGATTTACTAAGTACAAAGTTGAAAATTTAGGATATTATTTGACATAAAGATCAATTTGATATTGAATAGATCAGTTAACTTTTTAAAATTTAAAAATGTCAATGACTTATTAAACACAAAATTGATAGTTCAAGTATCTATTAGACACAAAATTTAAAGTTCAAATATCTTTTAAAAACTTTTTAAAGTTAAGAGACCAAATAGATATAAACTTGAAAGTTCAAGGAACAAAACTTGTAATTTAACCCATCTTTGTCATGCTAAGCTGTTTTATTTTAAGTTCTCCGTGAGTCATGTGTCCTAAGCCTTTTTGTTTTTTAAGGGTCCCTTCATAGATACAATTGTTTTCTTTTTTTTTTTTAAAAAAGATACAATTGTTTTCTTAAGTCCTTGATTTGATTCGAATTTGTAAATGTATACAGCCGAAGGCTTCTCAATCTAAGTGATGAAAACTTAGTCTAGAAGCCAAAGTATTTGTACGACTTCGGTTAGAAAAGGTTTCGGTGTTTCTAAAAGCAAACATTTCATAATCTTTTTTTATATAGTGTTTATTTAAATAAACAGAAGTGTTTTTAAACATTCTAAAATACTTAAAATAAAATGTTTTTGAACGAAACACTTAATTAATCTTTTTTCCAAAACGTACTTCACTTTTGAATTCAATGTATGGGAGTGATAGAAATTGAACCTCTCACTTCTTGATTGAAAGTATATACCTTAACCAATCGAACTATGCTCAGGTTGGCTGAAACACACTTCCACTTTAACCACTTTAAATGTTCCTCTAATCTCACTCTAACGAGCTCGTCCCAGTGATATAATAGTTAAAATACCTCAATATGAATAAAACTCATTCTCATAACCACCCAAATTGCTCCAAAGGGCATGGCATTCTTCCAACATCATATTATTTCTATACTTCTATTATGCCTTATTTGTCTCAAGTGCCACTCACTTGTCAATTAATACAGCCTGTGAAAATATTCTTGGTGTCAGCTTGAGGCCCACTAAAGGCTACTTATCATTCACAAGATTAGTATTCTGATCAATTAAACAAAATCCATAATGGTTCCTTGATTGGTGGAGTGAGATAATGGAGATTGTTGAGTTCTACATATCTCCTCATCAACCAATTAGAAGAGGATGAAAATCCACAAGGATAGACTTTGTGGGTCTCACCAGACACTATATAAGAAGATATCATACTCCTTGCAATTCATCAGTAACTCAATTCAAAAGCACTTTGAGGACTAAACTTCCTTGGGGTTAAAGTTTGGTAGACATGGCAGCCATGGCTCTTTCATCTACCTTCACAGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTGTCTTCCTCGGTTCGCAGCAACGGGAGAGTCTTGATGAGGAAATCTGGAAAGCCAGCATCTTCCTCGGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCACCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCTGGTCTATCAGCTGACCCCGAGACCTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTCCTGATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCGTTTGCAGAGCTTAAGGTAAAAGAACTTAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCATTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

mRNA sequence

ATGGAGACCTTTCTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGTGACCAGATCTCAGATGCAGTTCTTGATGCTTGCCTTGCCCAAGATCCTGACAGCAAGGTTGCTTGTGAGACCTGCACCAAGACCAACATGGTTATGGTTTTTGGAGAGATTACAACCAAAGCCAACGTGGACTACGAGAAGATCGTCCGAGACACTTGCCGGTCCATCGGATTCATCTCAGATGATGTTGGTCTCGATGCCGACAACTGCAAGGTCCTGGTCAACATCGAGCAGCAGAGTCCTGATATTGCCCAAGGTGTCCATGGTCATTTCACTAAGCGACCTGAGGACATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTCATGCCCCTGAGTCATGTCCTTGCAACGAAGCTCGGCGCTCGCCTCACTGAGGTGAGGAAGAATGGCACCTGCTCATGGTTGAGACCTGACGGCAAGACCCAAGTTACTGTGGAGTATTACAATGATAATGACATGGCAGCCATGGCTCTTTCATCTACCTTCACAGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTGTCTTCCTCGGTTCGCAGCAACGGGAGAGTCTTGATGAGGAAATCTGGAAAGCCAGCATCTTCCTCGGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCACCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCTGGTCTATCAGCTGACCCCGAGACCTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTCCTGATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCGTTTGCAGAGCTTAAGGTAAAAGAACTTAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCATTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Coding sequence (CDS)

ATGGAGACCTTTCTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGTGACCAGATCTCAGATGCAGTTCTTGATGCTTGCCTTGCCCAAGATCCTGACAGCAAGGTTGCTTGTGAGACCTGCACCAAGACCAACATGGTTATGGTTTTTGGAGAGATTACAACCAAAGCCAACGTGGACTACGAGAAGATCGTCCGAGACACTTGCCGGTCCATCGGATTCATCTCAGATGATGTTGGTCTCGATGCCGACAACTGCAAGGTCCTGGTCAACATCGAGCAGCAGAGTCCTGATATTGCCCAAGGTGTCCATGGTCATTTCACTAAGCGACCTGAGGACATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACAGATGAGACCCCAGAACTCATGCCCCTGAGTCATGTCCTTGCAACGAAGCTCGGCGCTCGCCTCACTGAGGTGAGGAAGAATGGCACCTGCTCATGGTTGAGACCTGACGGCAAGACCCAAGTTACTGTGGAGTATTACAATGATAATGACATGGCAGCCATGGCTCTTTCATCTACCTTCACAGGAAAAGCTGTTCCTTTGAATGCACCAACCGAGCTGTCTTCCTCGGTTCGCAGCAACGGGAGAGTCTTGATGAGGAAATCTGGAAAGCCAGCATCTTCCTCGGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTCGGACCATTCTCTGGTGAGCCACCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCTGGTCTATCAGCTGACCCCGAGACCTTTGCTAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAGAGCATTTTGGCCATTTGGGCATGTCAAGTAGTCCTGATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTCGGGCTGGCCGATGATCCAGAGGCGTTTGCAGAGCTTAAGGTAAAAGAACTTAAGAACGGCCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTGCAGGCCATTGTAACAGGAAAAGGTCCATTGGAGAACCTCGCAGATCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGGAAGTGA

Protein sequence

METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDNDMAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Homology
[Close]
BLAST of Spg039052 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 539.3 bits (1388), Expect = 3.2e-149
Identity = 261/265 (98.49%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGKAVPLNAPTEL SSVRSNGRV MRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. NCBI nr
Match: XP_022948926.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_023524829.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo] >KAG6606914.1 Chlorophyll a-b binding protein 3C, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 538.5 bits (1386), Expect = 5.5e-149
Identity = 261/265 (98.49%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGKAVPLNAPTEL SSVRSNGRV MRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 535.0 bits (1377), Expect = 6.0e-148
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGK VPLNAPTELSSSVRSNGR+ MRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 6.0e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRV MR+SGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. NCBI nr
Match: XP_022159070.1 (chlorophyll a-b binding protein of LHCII type 1 [Momordica charantia])

HSP 1 Score: 533.1 bits (1372), Expect = 2.3e-147
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMAL+STFTGKAVPL+APTELSSSV SNGRV MR+SG+PA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALTSTFTGKAVPLSAPTELSSSVGSNGRVSMRRSGRPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 6.7e-134
Identity = 232/259 (89.58%), Postives = 239/259 (92.28%), Query Frame = 0 

Query: 190 TFTGKAVPL--NAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGPFSGEPP 249
           T  G+AV L  NAP      ++ N +  MRK+   + SSGSPWYGPDRVKYLGPFSGEPP
Sbjct: 2   TLAGQAVKLSPNAP-----EIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPP 61

Query: 250 SYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 309
           SYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG
Sbjct: 62  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 121

Query: 310 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITD 369
           EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TD
Sbjct: 122 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 181

Query: 370 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 429
           PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 182 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 241

Query: 430 ADPVNNNAWAYATNFVPGK 447
           ADPVNNNAWAYATNFVPGK
Sbjct: 242 ADPVNNNAWAYATNFVPGK 255

[Close]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.2e-133
Identity = 235/267 (88.01%), Postives = 245/267 (91.76%), Query Frame = 0 

Query: 183 AAMAL-SSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPA--SSSGSPWYGPDRVKYL 242
           + MAL SSTF GKAV L+     SS +  NGRV MRK+   A  +SSGSPWYGPDRVKYL
Sbjct: 4   STMALSSSTFAGKAVKLSPS---SSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 63

Query: 243 GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 302
           GPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 123

Query: 303 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 362
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match: P27492 (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB16 PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 5.7e-133
Identity = 231/263 (87.83%), Postives = 241/263 (91.63%), Query Frame = 0 

Query: 186 ALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPAS--SSGSPWYGPDRVKYLGPFS 245
           ALSS F GKAV L+     SS V  NG+V MRK+   A   SSGSPWYGPDRVKYLGPFS
Sbjct: 7   ALSSPFAGKAVKLSPS---SSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 66

Query: 246 GEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 305
           GE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 67  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 126

Query: 306 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLG 365
           VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLG
Sbjct: 127 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 186

Query: 366 EITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 425
           E+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 187 EVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 246

Query: 426 ADHLADPVNNNAWAYATNFVPGK 447
           ADHLADPVNNNAW+YATNFVPGK
Sbjct: 247 ADHLADPVNNNAWSYATNFVPGK 266

[Close]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 9.7e-133
Identity = 232/267 (86.89%), Postives = 244/267 (91.39%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPAS--SSGSPWYGPDRVKYL 242
           + MALSS +F GKAV L+     SS +  NG+V MRK+   A   SSGSPWYGPDRVKYL
Sbjct: 4   STMALSSPSFAGKAVKLSPS---SSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 63

Query: 243 GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 302
           GPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 123

Query: 303 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 362
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match: P27497 (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.2e-132
Identity = 232/268 (86.57%), Postives = 245/268 (91.42%), Query Frame = 0 

Query: 183 AAMALSST-FTGKAVPLNAPTELSSSVRSNGRVLMRKS---GKPASSSGSPWYGPDRVKY 242
           + MALSST F GKAV  N P    SS+    RV MRK+    KPA+SSGSPWYGPDRV Y
Sbjct: 4   STMALSSTAFAGKAV--NVP----SSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 63

Query: 243 LGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 302
           LGP SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 123

Query: 303 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 362
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+A
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 183

Query: 363 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 422
           GGPLGE+ DP+YPGG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 GGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 423 PLENLADHLADPVNNNAWAYATNFVPGK 447
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.6e-149
Identity = 261/265 (98.49%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGKAVPLNAPTEL SSVRSNGRV MRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match: A0A6J1GAK0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452433 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.6e-149
Identity = 261/265 (98.49%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGKAVPLNAPTEL SSVRSNGRV MRKSGKPASSSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.9e-148
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGK VPLNAPTELSSSVRSNGR+ MRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.9e-148
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMALSSTFTGK VPLNAPTELSSSVRSNGR+ MRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match: A0A6J1DXL6 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025509 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 1.1e-147
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0 

Query: 182 MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 241
           MAAMAL+STFTGKAVPL+APTELSSSV SNGRV MR+SG+PA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALTSTFTGKAVPLSAPTELSSSVGSNGRVSMRRSGRPAASSGSPWYGPDRVKYLGP 60

Query: 242 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 301
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 302 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 361
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 362 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 421
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 422 NLADHLADPVNNNAWAYATNFVPGK 447
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Spg039052 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 461.1 bits (1185), Expect = 1.0e-129
Identity = 227/266 (85.34%), Postives = 239/266 (89.85%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKSGKPASSSGSPWYGPDRVKYLGP 242
           + MALSS   TGKAV L   +  +S V   GR+ MRK+ KP   SGSPWYG DRVKYLGP
Sbjct: 4   STMALSSPALTGKAVKL---SPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 63

Query: 243 FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 302
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 64  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 123

Query: 303 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-G 362
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 124 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 183

Query: 363 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 422
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 184 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243

Query: 423 ENLADHLADPVNNNAWAYATNFVPGK 447
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]
BLAST of Spg039052 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 454.9 bits (1169), Expect = 7.4e-128
Identity = 227/267 (85.02%), Postives = 238/267 (89.14%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKS-GKPASSSGSPWYGPDRVKYLG 242
           + MALSS  F GKAV        +S V  +GRV MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAV-----KPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 243 PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 302
           PFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 303 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 362
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]
BLAST of Spg039052 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 453.8 bits (1166), Expect = 1.7e-127
Identity = 226/267 (84.64%), Postives = 239/267 (89.51%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKS-GKPASSSGSPWYGPDRVKYLG 242
           + MALSS  F GKAV L   +  +S V  +GRV MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 243 PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 302
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 303 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 362
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Spg039052 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 453.4 bits (1165), Expect = 2.2e-127
Identity = 226/267 (84.64%), Postives = 239/267 (89.51%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKS-GKPASSSGSPWYGPDRVKYLG 242
           + MALSS  F GKAV L   +  +S V  +GRV MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 243 PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 302
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 303 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 362
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Spg039052 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 453.4 bits (1165), Expect = 2.2e-127
Identity = 226/267 (84.64%), Postives = 239/267 (89.51%), Query Frame = 0 

Query: 183 AAMALSS-TFTGKAVPLNAPTELSSSVRSNGRVLMRKS-GKPASSSGSPWYGPDRVKYLG 242
           + MALSS  F GKAV L   +  +S V  +GRV MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 243 PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 302
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 303 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 362
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 363 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 422
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 423 LENLADHLADPVNNNAWAYATNFVPGK 447
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:
BLAST of Spg039052 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998479.13.2e-14998.49chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima][more]
XP_022948926.15.5e-14998.49chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >XP_02... [more]
XP_008447450.16.0e-14897.36PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >... [more]
XP_038903667.16.0e-14897.36chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida][more]
XP_022159070.12.3e-14796.60chlorophyll a-b binding protein of LHCII type 1 [Momordica charantia][more]
BLAST of Spg039052 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P082216.7e-13489.58Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc... [more]
P073691.2e-13388.01Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408... [more]
P274925.7e-13387.83Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 G... [more]
P274959.7e-13386.89Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G... [more]
P274972.2e-13286.57Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 ... [more]
BLAST of Spg039052 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KEF61.6e-14998.49Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1GAK02.6e-14998.49Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5D3DAB92.9e-14897.36Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BHH52.9e-14897.36Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A6J1DXL61.1e-14796.60Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN... [more]
BLAST of Spg039052 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G34430.11.0e-12985.34light-harvesting chlorophyll-protein complex II subunit B1 [more]
AT2G34420.17.4e-12885.02photosystem II light harvesting complex gene B1B2 [more]
AT1G29930.11.7e-12784.64chlorophyll A/B binding protein 1 [more]
AT1G29910.12.2e-12784.64chlorophyll A/B binding protein 3 [more]
AT1G29920.12.2e-12784.64chlorophyll A/B-binding protein 2 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022629S-adenosylmethionine synthetase, central domainPFAMPF02772S-AdoMet_synt_Mcoord: 118..180
e-value: 2.2E-27
score: 95.7
NoneNo IPR availableGENE3D3.30.300.10coord: 11..116
e-value: 9.9E-83
score: 280.0
NoneNo IPR availableGENE3D3.30.300.10coord: 117..139
e-value: 9.9E-83
score: 280.0
NoneNo IPR availableGENE3D3.30.300.10coord: 4..182
e-value: 9.9E-83
score: 280.0
NoneNo IPR availablePANTHERPTHR21649:SF97CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTICcoord: 183..446
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 229..443
IPR022628S-adenosylmethionine synthetase, N-terminalPFAMPF00438S-AdoMet_synt_Ncoord: 4..101
e-value: 1.9E-42
score: 143.9
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 237..439
e-value: 3.5E-90
score: 303.3
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 246..412
e-value: 4.6E-49
score: 167.0
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 183..446
IPR022631S-adenosylmethionine synthetase, conserved sitePROSITEPS00376ADOMET_SYNTHASE_1coord: 119..129
IPR022636S-adenosylmethionine synthetase superfamilySUPERFAMILY55973S-adenosylmethionine synthetasecoord: 3..109
IPR022636S-adenosylmethionine synthetase superfamilySUPERFAMILY55973S-adenosylmethionine synthetasecoord: 115..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg039052.1Spg039052.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009416 response to light stimulus
biological_process GO:0006556 S-adenosylmethionine biosynthetic process
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004478 methionine adenosyltransferase activity