Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA
mRNA sequence
ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA
Coding sequence (CDS)
ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA
Protein sequence
MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTDWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPILEAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN
Homology
BLAST of Spg039012 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 194.5 bits (493), Expect = 7.3e-46
Identity = 103/180 (57.22%), Postives = 136/180 (75.56%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS-LKCT 62
MEFG LK NF L L+E+ E+R++Y+E+RA+NI+MAYL+W R FFFAISQ+SSS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL----------- 122
DWW+VL LS+SCAF+Y LFF+ AV +LY Q+QMDIIC++Q +I Q IL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 --EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
EAGDSS+GF+F+ FHV++L Y +F++V+RK YIC+ V ALLAVTA E Y+C +L C+
Sbjct: 121 AMEAGDSSDGFQFS--FHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Spg039012 vs. NCBI nr
Match:
XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])
HSP 1 Score: 171.0 bits (432), Expect = 8.6e-39
Identity = 93/173 (53.76%), Postives = 125/173 (72.25%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M+ LK +F +L +L E+ E +R+YE+RA+NI+M YL+WERFFFFA+SQ+SS LKC D
Sbjct: 1 MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCID 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
W VVL LSL C+F+Y L F+ AV +LY TQNQMD+IC++Q+ I Q IL
Sbjct: 61 WRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAM 120
Query: 123 EAGDSSEGFEFNFEFHVR-MLSYD-SFKVVQRKVYICSIVFALLAVTAFESYS 162
EAGD S+G FNF FH+R L+YD SF++ Q+KVYI +I+ +L+AVTA E Y+
Sbjct: 121 EAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Spg039012 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 157.5 bits (397), Expect = 9.9e-35
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M G L+ F +L + E+ E+R+RYYE + +NI YL++ R FFF ISQ+SSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
WWV+LALSL C+F+Y L F+ AV +L+ TQ Q+DIIC++ ++ Q IL
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
E G+SS GFEF FH +ML D F++V RKVYI V ALLAVTA E Y Y+LCN
Sbjct: 121 ETGESSGGFEFG--FHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Spg039012 vs. NCBI nr
Match:
XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])
HSP 1 Score: 142.9 bits (359), Expect = 2.5e-30
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M G L+ F +L + E+ E+R+RY+EA+ + I YL+ R FFF ISQ+SSS KC D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
WWV+L+LSL C+F+Y L F+ A LY T+ Q+D+IC++ ++ Q IL
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
E GD S+GFEF FH +ML D F+ V RKVYI V AL+AVTA E Y YLLCN
Sbjct: 121 EGGDFSDGFEFG--FHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
BLAST of Spg039012 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 141.7 bits (356), Expect = 5.6e-30
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = 0
Query: 1 MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS--- 60
MAME G LK NF L +L E+ E R+RYYE RA+N+++A L+W+R F + +SSS
Sbjct: 1 MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60
Query: 61 LKCT-DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------ 120
L CT W+VL SL+ LY+LFF+ AV +LY QNQ+DII ++Q +I IL
Sbjct: 61 LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 --EAGD--SSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLL 169
EAGD SS+ F V++L Y VVQRK+YI S + LLAV+AFE Y+C LL
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVSAFEVYTCKLLL 180
BLAST of Spg039012 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46
Identity = 103/180 (57.22%), Postives = 136/180 (75.56%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS-LKCT 62
MEFG LK NF L L+E+ E+R++Y+E+RA+NI+MAYL+W R FFFAISQ+SSS LKC
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60
Query: 63 DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL----------- 122
DWW+VL LS+SCAF+Y LFF+ AV +LY Q+QMDIIC++Q +I Q IL
Sbjct: 61 DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120
Query: 123 --EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
EAGDSS+GF+F+ FHV++L Y +F++V+RK YIC+ V ALLAVTA E Y+C +L C+
Sbjct: 121 AMEAGDSSDGFQFS--FHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178
BLAST of Spg039012 vs. ExPASy TrEMBL
Match:
A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 4.2e-39
Identity = 93/173 (53.76%), Postives = 125/173 (72.25%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M+ LK +F +L +L E+ E +R+YE+RA+NI+M YL+WERFFFFA+SQ+SS LKC D
Sbjct: 1 MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCID 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
W VVL LSL C+F+Y L F+ AV +LY TQNQMD+IC++Q+ I Q IL
Sbjct: 61 WRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAM 120
Query: 123 EAGDSSEGFEFNFEFHVR-MLSYD-SFKVVQRKVYICSIVFALLAVTAFESYS 162
EAGD S+G FNF FH+R L+YD SF++ Q+KVYI +I+ +L+AVTA E Y+
Sbjct: 121 EAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173
BLAST of Spg039012 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 4.8e-35
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M G L+ F +L + E+ E+R+RYYE + +NI YL++ R FFF ISQ+SSS C D
Sbjct: 1 MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
WWV+LALSL C+F+Y L F+ AV +L+ TQ Q+DIIC++ ++ Q IL
Sbjct: 61 WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120
Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
E G+SS GFEF FH +ML D F++V RKVYI V ALLAVTA E Y Y+LCN
Sbjct: 121 ETGESSGGFEFG--FHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176
BLAST of Spg039012 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 7.2e-31
Identity = 89/182 (48.90%), Postives = 113/182 (62.09%), Query Frame = 0
Query: 1 MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS--- 60
MAMEFG LK F L L E+ E R+RYYE RA+N+++A L+W+R FF + +SSS
Sbjct: 1 MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60
Query: 61 LKCT-DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------ 120
L CT W+V + LS LY LFF+ AV +LY QNQ+DII ++Q +I IL
Sbjct: 61 LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120
Query: 121 --EAGD--SSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLL 169
EAGD SS+ F V++L Y F +VQRKVYI S +F LLAV AFE Y+C LL
Sbjct: 121 DDEAGDSISSDNGWLELSFQVQLLPYHPFTLVQRKVYIASTIFTLLAVAAFELYTCKLLL 180
BLAST of Spg039012 vs. ExPASy TrEMBL
Match:
A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 3 MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
M G L+ F +L + E+ E+R+RY+EA+ + I YL+ R FFF ISQ+SSS KC D
Sbjct: 1 MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60
Query: 63 WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
WWV+L+LSL C+F+Y L F+ A LY T+ Q+D+IC++ ++ Q IL
Sbjct: 61 WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120
Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
E GD S+GFEF FH +ML D F+ V RKVYI V AL+AVTA E Y YLLCN
Sbjct: 121 EGGDFSDGFEFG--FHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157130.1 | 7.3e-46 | 57.22 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157172.1 | 8.6e-39 | 53.76 | uncharacterized protein LOC111023951 [Momordica charantia] | [more] |
XP_022157182.1 | 9.9e-35 | 49.44 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
XP_022157176.1 | 2.5e-30 | 47.75 | uncharacterized protein LOC111023953 isoform X2 [Momordica charantia] | [more] |
ADN33782.1 | 5.6e-30 | 47.80 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DS87 | 3.5e-46 | 57.22 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DTV6 | 4.2e-39 | 53.76 | uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DSQ0 | 4.8e-35 | 49.44 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A0A0KM15 | 7.2e-31 | 48.90 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
A0A6J1DX74 | 1.2e-30 | 47.75 | uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |