Spg039012 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg039012
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 91-like protein
Locationscaffold12: 1079068 .. 1079574 (+)
RNA-Seq ExpressionSpg039012
SyntenySpg039012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA

mRNA sequence

ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA

Coding sequence (CDS)

ATGGCCATGGAGTTCGGAGCTCTCAAGAGTAATTTTGTGGATCTGAATGTTCTCATCGAGAGGCTCGAAACCAGAATGCGCTACTACGAGGCTAGAGCGGAGAACATTTCCATGGCCTATCTCGTCTGGGAGCGGTTTTTCTTCTTTGCTATCTCACAGAGTTCCTCCTCACTCAAGTGTACTGATTGGTGGGTCGTTTTGGCTTTGAGTCTTTCCTGTGCTTTCCTGTATATTCTCTTTTTCATGAGGGCTGTGATCTTGTTGTATTGGACTCAGAACCAGATGGACATAATTTGCGAGCAACAGAACAAAATTCGTCAACCGATTTTGGAGGCTGGAGATTCAAGTGAAGGGTTCGAGTTTAATTTCGAGTTTCATGTGAGGATGCTCAGCTATGATTCATTCAAAGTTGTCCAGAGGAAGGTTTATATCTGCTCCATTGTCTTTGCTCTGCTTGCTGTTACTGCTTTTGAATCGTATTCCTGTATGTACTTGCTTTGCAACTGA

Protein sequence

MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTDWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPILEAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN
Homology
BLAST of Spg039012 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 7.3e-46
Identity = 103/180 (57.22%), Postives = 136/180 (75.56%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS-LKCT 62
           MEFG LK NF  L  L+E+ E+R++Y+E+RA+NI+MAYL+W R FFFAISQ+SSS LKC 
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60

Query: 63  DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL----------- 122
           DWW+VL LS+SCAF+Y LFF+ AV +LY  Q+QMDIIC++Q +I Q IL           
Sbjct: 61  DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120

Query: 123 --EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
             EAGDSS+GF+F+  FHV++L Y +F++V+RK YIC+ V ALLAVTA E Y+C +L C+
Sbjct: 121 AMEAGDSSDGFQFS--FHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178

BLAST of Spg039012 vs. NCBI nr
Match: XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])

HSP 1 Score: 171.0 bits (432), Expect = 8.6e-39
Identity = 93/173 (53.76%), Postives = 125/173 (72.25%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M+   LK +F +L +L E+ E  +R+YE+RA+NI+M YL+WERFFFFA+SQ+SS LKC D
Sbjct: 1   MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCID 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           W VVL LSL C+F+Y L F+ AV +LY TQNQMD+IC++Q+ I Q IL            
Sbjct: 61  WRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAM 120

Query: 123 EAGDSSEGFEFNFEFHVR-MLSYD-SFKVVQRKVYICSIVFALLAVTAFESYS 162
           EAGD S+G  FNF FH+R  L+YD SF++ Q+KVYI +I+ +L+AVTA E Y+
Sbjct: 121 EAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173

BLAST of Spg039012 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 157.5 bits (397), Expect = 9.9e-35
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M  G L+  F +L  + E+ E+R+RYYE + +NI   YL++ R FFF ISQ+SSS  C D
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           WWV+LALSL C+F+Y L F+ AV +L+ TQ Q+DIIC++  ++ Q IL            
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
           E G+SS GFEF   FH +ML  D F++V RKVYI   V ALLAVTA E Y   Y+LCN
Sbjct: 121 ETGESSGGFEFG--FHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Spg039012 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-30
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M  G L+  F +L  + E+ E+R+RY+EA+ + I   YL+  R FFF ISQ+SSS KC D
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           WWV+L+LSL C+F+Y L F+ A   LY T+ Q+D+IC++  ++ Q IL            
Sbjct: 61  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120

Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
           E GD S+GFEF   FH +ML  D F+ V RKVYI   V AL+AVTA E Y   YLLCN
Sbjct: 121 EGGDFSDGFEFG--FHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Spg039012 vs. NCBI nr
Match: ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 141.7 bits (356), Expect = 5.6e-30
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = 0

Query: 1   MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS--- 60
           MAME G LK NF  L +L E+ E R+RYYE RA+N+++A L+W+R F   +  +SSS   
Sbjct: 1   MAMELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSL 60

Query: 61  LKCT-DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------ 120
           L CT   W+VL  SL+   LY+LFF+ AV +LY  QNQ+DII ++Q +I   IL      
Sbjct: 61  LNCTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120

Query: 121 --EAGD--SSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLL 169
             EAGD  SS+       F V++L Y    VVQRK+YI S +  LLAV+AFE Y+C  LL
Sbjct: 121 DDEAGDTFSSDNGGLELSFQVQLLQYHPLTVVQRKIYIASTISTLLAVSAFEVYTCKLLL 180

BLAST of Spg039012 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46
Identity = 103/180 (57.22%), Postives = 136/180 (75.56%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS-LKCT 62
           MEFG LK NF  L  L+E+ E+R++Y+E+RA+NI+MAYL+W R FFFAISQ+SSS LKC 
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSLLKCI 60

Query: 63  DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL----------- 122
           DWW+VL LS+SCAF+Y LFF+ AV +LY  Q+QMDIIC++Q +I Q IL           
Sbjct: 61  DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL 120

Query: 123 --EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
             EAGDSS+GF+F+  FHV++L Y +F++V+RK YIC+ V ALLAVTA E Y+C +L C+
Sbjct: 121 AMEAGDSSDGFQFS--FHVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLYCD 178

BLAST of Spg039012 vs. ExPASy TrEMBL
Match: A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.2e-39
Identity = 93/173 (53.76%), Postives = 125/173 (72.25%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M+   LK +F +L +L E+ E  +R+YE+RA+NI+M YL+WERFFFFA+SQ+SS LKC D
Sbjct: 1   MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQTSSPLKCID 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           W VVL LSL C+F+Y L F+ AV +LY TQNQMD+IC++Q+ I Q IL            
Sbjct: 61  WRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQDDGGSAM 120

Query: 123 EAGDSSEGFEFNFEFHVR-MLSYD-SFKVVQRKVYICSIVFALLAVTAFESYS 162
           EAGD S+G  FNF FH+R  L+YD SF++ Q+KVYI +I+ +L+AVTA E Y+
Sbjct: 121 EAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELYA 173

BLAST of Spg039012 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.8e-35
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M  G L+  F +L  + E+ E+R+RYYE + +NI   YL++ R FFF ISQ+SSS  C D
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           WWV+LALSL C+F+Y L F+ AV +L+ TQ Q+DIIC++  ++ Q IL            
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
           E G+SS GFEF   FH +ML  D F++V RKVYI   V ALLAVTA E Y   Y+LCN
Sbjct: 121 ETGESSGGFEFG--FHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Spg039012 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 7.2e-31
Identity = 89/182 (48.90%), Postives = 113/182 (62.09%), Query Frame = 0

Query: 1   MAMEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSS--- 60
           MAMEFG LK  F  L  L E+ E R+RYYE RA+N+++A L+W+R FF  +  +SSS   
Sbjct: 1   MAMEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSL 60

Query: 61  LKCT-DWWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------ 120
           L CT   W+V +  LS   LY LFF+ AV +LY  QNQ+DII ++Q +I   IL      
Sbjct: 61  LNCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPN 120

Query: 121 --EAGD--SSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLL 169
             EAGD  SS+       F V++L Y  F +VQRKVYI S +F LLAV AFE Y+C  LL
Sbjct: 121 DDEAGDSISSDNGWLELSFQVQLLPYHPFTLVQRKVYIASTIFTLLAVAAFELYTCKLLL 180

BLAST of Spg039012 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 0

Query: 3   MEFGALKSNFVDLNVLIERLETRMRYYEARAENISMAYLVWERFFFFAISQSSSSLKCTD 62
           M  G L+  F +L  + E+ E+R+RY+EA+ + I   YL+  R FFF ISQ+SSS KC D
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSS-KCHD 60

Query: 63  WWVVLALSLSCAFLYILFFMRAVILLYWTQNQMDIICEQQNKIRQPIL------------ 122
           WWV+L+LSL C+F+Y L F+ A   LY T+ Q+D+IC++  ++ Q IL            
Sbjct: 61  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAM 120

Query: 123 EAGDSSEGFEFNFEFHVRMLSYDSFKVVQRKVYICSIVFALLAVTAFESYSCMYLLCN 169
           E GD S+GFEF   FH +ML  D F+ V RKVYI   V AL+AVTA E Y   YLLCN
Sbjct: 121 EGGDFSDGFEFG--FHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157130.17.3e-4657.22uncharacterized protein LOC111023927 [Momordica charantia][more]
XP_022157172.18.6e-3953.76uncharacterized protein LOC111023951 [Momordica charantia][more]
XP_022157182.19.9e-3549.44uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.12.5e-3047.75uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
ADN33782.15.6e-3047.80hypothetical protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DS873.5e-4657.22uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DTV64.2e-3953.76uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DSQ04.8e-3549.44uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KM157.2e-3148.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1[more]
A0A6J1DX741.2e-3047.75uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 1..168
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg039012.1Spg039012.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane