Spg038920 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038920
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin-conjugating enzyme E2 10
Location	scaffold12: 1432645 .. 1435855 (+)
RNA-Seq Expression	Spg038920
Synteny	Spg038920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTCTGATGGCGTCTAAGCGGATCTTGAAGGAACTCAAGGACTTGCAGAGGGATCCTCCTACATCTTGCAGTGCTGGTATTTTGATTCTTTTGTCTCCTTTTTTTTTGTTGTGGTAATTGTTCTTTTGCGGATTTGCTGCTGGTTGGGATCGGATGGTTTTAATTTTGATATGATTGAGAAGATTTAAATGTGTTTGTAATTGATGATGGCTTGAATTAGGATGCTTTCTGATTTTAATTTTTAAGGGTGTTTCTCTGTGCTTATGAATTCCTTTGAAAGAAACGCATTTCCTTTGAAATGGGAAAGATAGTTGATAGTTATAGCCTCGAGGATAGTTTTAGTAGAGATGTAATTTTGATGTACTCTTTTCAAAGGCATTTTTCCATTCTTTCGAACCAAGGTGTTTTGAACAAATGTCCACATAAATTGTGTTGTCCCTCCCTATTTAGGATAAATATATATCTTAGTTCTTAATGTTGGGGTGCTTTTCTGTTAAAAAGTTTCATTTTAGTTCGTTACATTTTAACCCTTTTTCCATTATTTATAATCTTTTTGTTGGTGAATGTTAAAATTGGTTGATGATAGGTTTACATGGGATGATAATTAATGAATTTAAAGAATGAATTAGGTCACCTAAAAGCCGAAAGTTTCTAGTTCCTTCTCAAAATTTCTAAGAAGTTGGTAGAATTTTCAGTTTTTCCTCTATCAGGTGACCTAATTTCTCCTCAATTTTTGGTCAAAATCACTAAGTACTATTCTGTATAAGCTTTACCACGGGAATGGTATAATTAAAAAATCTTGAAACGTAAGAGACTAAGTTGAAACTTTTTAAATAATCGGGTCTAAGTTGTATAAACATCCCAACATTTAAGGACTGGAACATATATTCAACCTTTTCATAATGTAGAAGGCTTATAATTTGATATGGACGCTGCAAGTTTTCCTTTCTTGATACTTTCTGCATCTATCCCAGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTATTCAATTCGTTCTTAATTTTTGATCTGGGTATTTTTATCACTCACATTCTCCTGCTTTTGCATTCACAAGTGTATTGATTTTTTTATTTTAGTATTCAGCCTCTAGATTCCCAACCAAGGACTATTATGGGTCTACAAACATGTATGAGAAACTCATGTCTATAGTCTGTAGATGAATAATGTCAGACCATAGACCTATTAACATTTGGAATTCTGGTCGGGACTTCAGGAAATGTTATTGAGATCTCTCAGACACGGCCTTTGATCTAAATCATGGAAAACAGTTGCTTCTCATACGGAACCCTTTTTAACACCTATCCTACAGTAATGTTGAATCCACAATGACTATTTTTTGTTCTTTCAACTCATTAAACTAATTAATTTTCAGGTAGCATTCAGAACAAAGGTATTCCATCCAAATATAAACAGCAACGGAAGCATTTGCCTGGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTTTGGTCCCCTGAAACCACGAAGTTCATTGAAAATCATAGTAAATTATCATATAACACATCTAACTTCTTTCATGATAATATTTCCTGCATCCACAACATTCATCTTAAGATAATGTAATTGTATGGTCAAATCAAATTGTTCCCATCAAAGTCAGTGTGATTAATTATCATTTTATTGTCATGATCATTTAAATCAGATATGCAATTGTAGTTTACCTTCTTCCCTCAGGCTCAGTTGAAAGTTGGTAATTACATTTGATAGTACACTAAAATGTTTATTTCGAGCATGTTCTTTTGATGAAGTTCTTGTGCCCTCTATCCATCAATTGTTGCATCCTCTGCATTAGATTTTTCATGTGCATGGTGGACTTTGACATAATAGATCCCTGGTTTAGATCTAGCATAAATCGATCTAGTTCGAATTAATAGGTTTGTTACATTGTTCTGTAATTTTGATTGATGAATCTTTGGCCATAAGTTTCTGTTAAACGGATAGATTATTCATTTGTTAAGGTGTTGCTCTCAATCTGTTCTTTGTTAACGGATCCTAATCCCGATGATCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACCACTGCAAGGAGCTGGACCCAGAAGTATGCGATGGGATAAATAGTATCCCAATCTCTACCTTGTAAGTTGGGAGTCTAATGTCATTTTATATATGTCTCTGGCAATTTGTATGCAATTGTAATTCTCCGTTTCAATCCCTCTGAAAAAGAAATGCACCAAATGTTTGGTGCAACAATAGCTTTGTGAAAGAAGGTAAAAGCATGTTTTTCCCTTGTTCTGCATGGATAATGTGAGCTCTGTTTAGGGTTTTGTATGAATGTAATCGTGCTGTGAAGTCCTTGAACATCTCTCTTTTGTTTTCTAAGTTCCGTATATTGGCTGCAACCCCAGCGATGAAAAATGAAAAGTGGCTAACGTGTTCTTGAAAATCCTGAAAGAATGCTTCGCTTAAATACACTACTTGGAAGGGGGTTGGTCTTGTGAGAATCTCTTTCTTTTCCTTCCCAAATATGGAGATGACAGATTGAACCTTCAACCTCAGAAAAGGTAATAATAGGTGTCTTTATCCATTAAGCTGTGGTCGGATTGACAGTTTTGTGAGAATTTTGATCGGTTGTGAGAATTTAGGTTAGAATAACGTGGCTAACAGTTTTATGTCATTAAATGTGAGAATTTAGAAACTGTGTTCGGAACTTGTATTGGATATTATTAGGAATGAGTAGATTTTGGAGCTGCAGCAATGGAGGTGTTATTAGGGCGGGGGTATTTAGATTTTGCTTGTTTGTTTGGCAGGAACGTGGGGGTACTTGCAACCTTGATTGGTTTGCTGATGTGTTTTCTATGGGATTTTATTTTAGTGGCGTTGTATCTCCTTTTTTGGTTCTTATTTTCTGTTTTATATATATAAATGAAAATGTGTTTCTTGATTGAGAGAAGGGTCTTTTTTGTTCTTTTTTTTTTTTTTTTTTTTTGAAAAAAGTAATAAAATATGTTTGTTTACTATTGTTAGTTTCTAACTCGATCTCGATTAAATATTAAATTAAAGTTTCA

mRNA sequence

GTTTTTCTGATGGCGTCTAAGCGGATCTTGAAGGAACTCAAGGACTTGCAGAGGGATCCTCCTACATCTTGCAGTGCTGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCATTCAGAACAAAGGTATTCCATCCAAATATAAACAGCAACGGAAGCATTTGCCTGGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTGTTGCTCTCAATCTGTTCTTTGTTAACGGATCCTAATCCCGATGATCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACCACTGCAAGGAGCTGGACCCAGAAGTATGCGATGGGATAA

Coding sequence (CDS)

GTTTTTCTGATGGCGTCTAAGCGGATCTTGAAGGAACTCAAGGACTTGCAGAGGGATCCTCCTACATCTTGCAGTGCTGGTCCTGTAGCTGAAGACATGTTTCACTGGCAAGCAACCATAATGGGACCTCCAGACAGTCCCTATGCTGGTGGTGTCTTCCTTGTCACCATTCACTTCCCTCCAGACTACCCATTTAAGCCTCCCAAGGTAGCATTCAGAACAAAGGTATTCCATCCAAATATAAACAGCAACGGAAGCATTTGCCTGGACATATTGAAAGAGCAGTGGAGCCCTGCCCTAACCATTTCTAAGGTGTTGCTCTCAATCTGTTCTTTGTTAACGGATCCTAATCCCGATGATCCGTTGGTGCCGGAGATTGCTCACATGTACAAGACAGACAGGAACAAGTATGAAACCACTGCAAGGAGCTGGACCCAGAAGTATGCGATGGGATAA

Protein sequence

VFLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG

Homology

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BLAST of Spg038920 vs. NCBI nr
Match: KAG6605766.1 (Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.4 bits (812), Expect = 6.7e-83
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           FLMASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 282 FLMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 341

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 342 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 401

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 402 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 431

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BLAST of Spg038920 vs. NCBI nr
Match: TKY74134.1 (Ubiquitin-conjugating enzyme E2 10 [Spatholobus suberectus])

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 148/151 (98.01%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   VFLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 60
           VF+MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP
Sbjct: 50  VFVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 109

Query: 61  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 120
           PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 110 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 169

Query: 121 PLVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PLVPEIAHMYKTDRNKYE+TARSWTQKYAMG
Sbjct: 170 PLVPEIAHMYKTDRNKYESTARSWTQKYAMG 200

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BLAST of Spg038920 vs. NCBI nr
Match: XP_039054316.1 (ubiquitin-conjugating enzyme E2 10 isoform X1 [Hibiscus syriacus])

HSP 1 Score: 315.5 bits (807), Expect = 2.5e-82
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           F MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 85  FAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 144

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 145 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 204

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 205 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 234

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BLAST of Spg038920 vs. NCBI nr
Match: KAF5451120.1 (hypothetical protein F2P56_031415, partial [Juglans regia])

HSP 1 Score: 314.7 bits (805), Expect = 4.3e-82
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   VFLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 60
           V  MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP
Sbjct: 49  VLAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 108

Query: 61  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 120
           PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 109 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 168

Query: 121 PLVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PLVPEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 169 PLVPEIAHMYKTDRNKYETTARSWTQKYAMG 199

[Close]

BLAST of Spg038920 vs. NCBI nr
Match: KAF5451122.1 (hypothetical protein F2P56_031417 [Juglans regia])

HSP 1 Score: 314.7 bits (805), Expect = 4.3e-82
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   VFLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 60
           V  MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP
Sbjct: 25  VLAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 84

Query: 61  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 120
           PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD
Sbjct: 85  PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 144

Query: 121 PLVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PLVPEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 145 PLVPEIAHMYKTDRNKYETTARSWTQKYAMG 175

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BLAST of Spg038920 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-82
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

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BLAST of Spg038920 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.5e-82
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTDR KYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.5e-82
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-81
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTDR KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.5e-81
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTDR KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. ExPASy TrEMBL
Match: A0A6J1DX68 (ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111023950 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTDRNKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. ExPASy TrEMBL
Match: A0A5D2IGM4 (UBC core domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D11G014200v1 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           F MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 68  FAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 127

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 128 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 187

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTD+NKYETTARSWTQKYAMG
Sbjct: 188 LVPEIAHMYKTDKNKYETTARSWTQKYAMG 217

[Close]

BLAST of Spg038920 vs. ExPASy TrEMBL
Match: A0A5D2N5Z6 (UBC core domain-containing protein (Fragment) OS=Gossypium tomentosum OX=34277 GN=ES332_A11G016500v1 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           F MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 64  FTMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 123

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 124 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 183

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTD+NKYETTARSWTQKYAMG
Sbjct: 184 LVPEIAHMYKTDKNKYETTARSWTQKYAMG 213

[Close]

BLAST of Spg038920 vs. ExPASy TrEMBL
Match: A0A161WZM2 (UBC core domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_005022 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 147/150 (98.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           F+MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 47  FVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 106

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 107 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 166

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTDR+KYETTARSWTQKYAMG
Sbjct: 167 LVPEIAHMYKTDRSKYETTARSWTQKYAMG 196

[Close]

BLAST of Spg038920 vs. ExPASy TrEMBL
Match: A0A1U8J805 (ubiquitin-conjugating enzyme E2 10-like OS=Gossypium hirsutum OX=3635 GN=LOC107904577 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 2   FLMASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 61
           F MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP
Sbjct: 68  FAMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPP 127

Query: 62  DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 121
           DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP
Sbjct: 128 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 187

Query: 122 LVPEIAHMYKTDRNKYETTARSWTQKYAMG 152
           LVPEIAHMYKTD+NKYETTARSWTQKYAMG
Sbjct: 188 LVPEIAHMYKTDKNKYETTARSWTQKYAMG 217

[Close]

BLAST of Spg038920 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 305.8 bits (782), Expect = 1.9e-83
Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 305.1 bits (780), Expect = 3.2e-83
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of Spg038920 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 305.1 bits (780), Expect = 3.2e-83
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 4   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 63
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 64  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 123
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 124 PEIAHMYKTDRNKYETTARSWTQKYAMG 152
           PEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

The following BLAST results are available for this feature:

BLAST of Spg038920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605766.1	6.7e-83	99.33	Ubiquitin-conjugating enzyme E2 10, partial [Cucurbita argyrosperma subsp. soror...	[more]
TKY74134.1	1.5e-82	98.01	Ubiquitin-conjugating enzyme E2 10 [Spatholobus suberectus]	[more]
XP_039054316.1	2.5e-82	98.67	ubiquitin-conjugating enzyme E2 10 isoform X1 [Hibiscus syriacus]	[more]
KAF5451120.1	4.3e-82	98.01	hypothetical protein F2P56_031415, partial [Juglans regia]	[more]
KAF5451122.1	4.3e-82	98.01	hypothetical protein F2P56_031417 [Juglans regia]	[more]

BLAST of Spg038920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35133	2.6e-82	96.62	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
P35135	3.5e-82	97.30	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35132	4.5e-82	95.95	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
Q94F47	1.0e-81	95.95	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
Q8S919	6.5e-81	95.27	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]

BLAST of Spg038920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX68	2.7e-82	100.00	ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D2IGM4	2.7e-82	98.00	UBC core domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D11...	[more]
A0A5D2N5Z6	2.7e-82	98.00	UBC core domain-containing protein (Fragment) OS=Gossypium tomentosum OX=34277 G...	[more]
A0A161WZM2	2.7e-82	98.00	UBC core domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=D...	[more]
A0A1U8J805	2.7e-82	98.00	ubiquitin-conjugating enzyme E2 10-like OS=Gossypium hirsutum OX=3635 GN=LOC1079...	[more]

BLAST of Spg038920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53300.1	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.2	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT5G53300.4	1.9e-83	96.62	ubiquitin-conjugating enzyme 10	[more]
AT4G27960.1	3.2e-83	95.95	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	3.2e-83	95.95	ubiquitin conjugating enzyme 9	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..150 e-value: 2.3E-80 score: 283.0
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 6..148
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 6..148
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..144 e-value: 9.4E-54 score: 180.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 4..150 score: 61.412941
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 6..145 e-value: 1.574E-75 score: 219.766
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 3..151 e-value: 9.0E-76 score: 254.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 3..150
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 77..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038920.1	Spg038920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity