Spg038906 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038906
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 91-like protein
Locationscaffold12: 1084447 .. 1085016 (+)
RNA-Seq ExpressionSpg038906
SyntenySpg038906
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTGAATCTTGAAGCTCTGAGGAGGGATTTCGAGGCATCGAAGGTTCTTGCCGAAAATCAAGAATCGAGGCTTCGTCTCTACGAGACTAGAGCCCACGGCATCGCCATGGCCTACCTCATCTGGGAGAGGCTCTTCTTCTTTGCGATCTCTCGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCGACTGTGTTCATCGGTGGATGGTTTTGGGTTTGTCTCTTTGCTGTACCTTTGTGTTCGGTTTGCTCTTTCTCGACGCTGTCGTTATGCTGTGCCGGACTCAGAAGCTGCTCGACTTCATTTGCAAGAAACAGAGTGATGTCTGCCAACGGATGTCGGAGGCCGTAAACCAAGATGGTGGCCGGGCTTCGTCGATGGAGGCTGGAGGTTATTCCAGTGATGGGTTCGGGTTCGATTTCCGTTTGCAGGTCAGAATACTTAAGGATGATTCATTCAGAATTGTGGGGAGGAAAGTTTACATATGCGCCATTGCCGGTGCTCTGTTTGCTGTTACTGCTTTTGAACTATACGCCTCTAACTCCTTGCTTTGCCACTGA

mRNA sequence

ATGGCCGTGAATCTTGAAGCTCTGAGGAGGGATTTCGAGGCATCGAAGGTTCTTGCCGAAAATCAAGAATCGAGGCTTCGTCTCTACGAGACTAGAGCCCACGGCATCGCCATGGCCTACCTCATCTGGGAGAGGCTCTTCTTCTTTGCGATCTCTCGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCGACTGTGTTCATCGGTGGATGGTTTTGGGTTTGTCTCTTTGCTGTACCTTTGTGTTCGGTTTGCTCTTTCTCGACGCTGTCGTTATGCTGTGCCGGACTCAGAAGCTGCTCGACTTCATTTGCAAGAAACAGAGTGATGTCTGCCAACGGATGTCGGAGGCCGTAAACCAAGATGGTGGCCGGGCTTCGTCGATGGAGGCTGGAGGTTATTCCAGTGATGGGTTCGGGTTCGATTTCCGTTTGCAGGTCAGAATACTTAAGGATGATTCATTCAGAATTGTGGGGAGGAAAGTTTACATATGCGCCATTGCCGGTGCTCTGTTTGCTGTTACTGCTTTTGAACTATACGCCTCTAACTCCTTGCTTTGCCACTGA

Coding sequence (CDS)

ATGGCCGTGAATCTTGAAGCTCTGAGGAGGGATTTCGAGGCATCGAAGGTTCTTGCCGAAAATCAAGAATCGAGGCTTCGTCTCTACGAGACTAGAGCCCACGGCATCGCCATGGCCTACCTCATCTGGGAGAGGCTCTTCTTCTTTGCGATCTCTCGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCACTCGACTGTGTTCATCGGTGGATGGTTTTGGGTTTGTCTCTTTGCTGTACCTTTGTGTTCGGTTTGCTCTTTCTCGACGCTGTCGTTATGCTGTGCCGGACTCAGAAGCTGCTCGACTTCATTTGCAAGAAACAGAGTGATGTCTGCCAACGGATGTCGGAGGCCGTAAACCAAGATGGTGGCCGGGCTTCGTCGATGGAGGCTGGAGGTTATTCCAGTGATGGGTTCGGGTTCGATTTCCGTTTGCAGGTCAGAATACTTAAGGATGATTCATTCAGAATTGTGGGGAGGAAAGTTTACATATGCGCCATTGCCGGTGCTCTGTTTGCTGTTACTGCTTTTGAACTATACGCCTCTAACTCCTTGCTTTGCCACTGA

Protein sequence

MAVNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDGGRASSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASNSLLCH
Homology
BLAST of Spg038906 vs. NCBI nr
Match: XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia])

HSP 1 Score: 165.2 bits (417), Expect = 5.3e-37
Identity = 98/181 (54.14%), Postives = 122/181 (67.40%), Query Frame = 0

Query: 3   VNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSS 62
           + L  L+RDFE  K+LAE QE  LR YE+RA  I M YLIWER FFFA+S+       +S
Sbjct: 1   MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQ-------TS 60

Query: 63  SSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQ 122
           S L C+   +VLGLSL C+FV+ LLFL+AV ML RTQ  +D ICK+QSD+CQ++ +A NQ
Sbjct: 61  SPLKCIDWRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQ 120

Query: 123 DGGRASSMEAGGYSSD-GFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELY 182
           D G  S+MEAG  S    F F F ++  +  D SFRI  +KVYI AI  +L AVTA ELY
Sbjct: 121 DDG-GSAMEAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELY 173

BLAST of Spg038906 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-36
Identity = 98/181 (54.14%), Postives = 124/181 (68.51%), Query Frame = 0

Query: 8   LRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSSLDC 67
           L+R+FEA K L E QESR++ +E+RA  I MAYLIW RLFFFAIS+      +SSS L C
Sbjct: 6   LKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQ------TSSSLLKC 65

Query: 68  VHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDGGRA 127
           +  WMVLGLS+ C FV+ L FL+AV ML R Q  +D ICK+Q+++CQ++  A +Q     
Sbjct: 66  IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD 125

Query: 128 SSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASNSLL 187
            +MEAG  SSDGF F F   V++L+  +FRIV RK YICA   AL AVTA ELYA + L 
Sbjct: 126 LAMEAGD-SSDGFQFSF--HVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLY 177

Query: 188 C 189
           C
Sbjct: 186 C 177

BLAST of Spg038906 vs. NCBI nr
Match: XP_022957798.1 (uncharacterized protein LOC111459231 [Cucurbita moschata])

HSP 1 Score: 145.6 bits (366), Expect = 4.4e-31
Identity = 93/180 (51.67%), Postives = 118/180 (65.56%), Query Frame = 0

Query: 3   VNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSS 62
           + L+ L+RDFE    LAEN++ ++R Y++R +   MAYL W R F+FA+       SS+S
Sbjct: 1   MELQWLKRDFE---TLAENKQQKVRYYDSRVNYTTMAYLAWLRFFYFAL-------SSAS 60

Query: 63  SSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQ 122
           S+L CVH  MVLGLSL  +F++ L+ L   + L RT  LLD ICK+ + +CQR+ EA+NQ
Sbjct: 61  STLHCVHWPMVLGLSLSSSFLYFLILLQPFIKLYRTHNLLDTICKEHTLICQRILEAMNQ 120

Query: 123 DGGRASSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYA 182
           D       EAG  S+DG  FDF LQVR L DDSF     KVY CAIA AL AVTAFELYA
Sbjct: 121 DA------EAGA-SNDGVRFDFGLQVRALSDDSFCGGEMKVYGCAIAFALLAVTAFELYA 163

BLAST of Spg038906 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-30
Identity = 90/185 (48.65%), Postives = 113/185 (61.08%), Query Frame = 0

Query: 5   LEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSS 64
           L  L R FE  K + E QESR+R YET+   I   YLI+ RLFFF IS+       +SSS
Sbjct: 3   LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-------TSSS 62

Query: 65  LDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDG 124
            +C   W++L LSL C+F++ LLFLDAV ML RTQ  LD ICK+  ++ Q++  + NQD 
Sbjct: 63  FNCKDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQD- 122

Query: 125 GRASSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASN 184
               SME G  S    GF+F    ++L  D FRIVGRKVYI     AL AVTA ELY S 
Sbjct: 123 DVGLSMETGESSG---GFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSK 176

Query: 185 SLLCH 190
            +LC+
Sbjct: 183 YVLCN 176

BLAST of Spg038906 vs. NCBI nr
Match: KAG6605757.1 (hypothetical protein SDJN03_03074, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-29
Identity = 91/188 (48.40%), Postives = 119/188 (63.30%), Query Frame = 0

Query: 3   VNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSS 62
           + LEAL+RD E    LAENQ+ R+R YE+RA+   + YL W R F+FA+       SS+S
Sbjct: 1   MELEALKRDLEC---LAENQQQRVRYYESRANYTTLGYLAWLRFFYFAV-------SSNS 60

Query: 63  SSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQ 122
           SSL CVH  MVLGLSL  + ++ L+ L   + L RT  LL  IC + + +CQR+ E+ NQ
Sbjct: 61  SSLHCVHWPMVLGLSLSSSSLYFLILLPPFIKLYRTHNLLHTICNRHTHLCQRILESTNQ 120

Query: 123 DGGRASSMEAGGYSSDGFGFDFRL-QVRILKDDSFRIVGRKVYICAIAGALFAVTAFELY 182
           DG      EAG  S+DG  F+ R  QVR L +DSF     KVY CA+A ALFAVTAF+LY
Sbjct: 121 DG------EAGA-STDGVEFNVRFHQVRALHNDSFSGGEIKVYTCAVAFALFAVTAFQLY 171

Query: 183 ASNSLLCH 190
           A   ++C+
Sbjct: 181 ACKYVVCN 171

BLAST of Spg038906 vs. ExPASy TrEMBL
Match: A0A6J1DTV6 (uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023951 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 98/181 (54.14%), Postives = 122/181 (67.40%), Query Frame = 0

Query: 3   VNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSS 62
           + L  L+RDFE  K+LAE QE  LR YE+RA  I M YLIWER FFFA+S+       +S
Sbjct: 1   MKLRVLKRDFEELKLLAEKQEPILRFYESRAQNITMGYLIWERFFFFALSQ-------TS 60

Query: 63  SSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQ 122
           S L C+   +VLGLSL C+FV+ LLFL+AV ML RTQ  +D ICK+QSD+CQ++ +A NQ
Sbjct: 61  SPLKCIDWRVVLGLSLVCSFVYFLLFLEAVTMLYRTQNQMDMICKEQSDICQQILDAGNQ 120

Query: 123 DGGRASSMEAGGYSSD-GFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELY 182
           D G  S+MEAG  S    F F F ++  +  D SFRI  +KVYI AI  +L AVTA ELY
Sbjct: 121 DDG-GSAMEAGDLSDGVAFNFSFHMRTTLNYDYSFRIFQKKVYISAIISSLVAVTALELY 173

BLAST of Spg038906 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 98/181 (54.14%), Postives = 124/181 (68.51%), Query Frame = 0

Query: 8   LRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSSLDC 67
           L+R+FEA K L E QESR++ +E+RA  I MAYLIW RLFFFAIS+      +SSS L C
Sbjct: 6   LKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQ------TSSSLLKC 65

Query: 68  VHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDGGRA 127
           +  WMVLGLS+ C FV+ L FL+AV ML R Q  +D ICK+Q+++CQ++  A +Q     
Sbjct: 66  IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD 125

Query: 128 SSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASNSLL 187
            +MEAG  SSDGF F F   V++L+  +FRIV RK YICA   AL AVTA ELYA + L 
Sbjct: 126 LAMEAGD-SSDGFQFSF--HVKLLEYGAFRIVERKFYICATVSALLAVTAIELYACSWLY 177

Query: 188 C 189
           C
Sbjct: 186 C 177

BLAST of Spg038906 vs. ExPASy TrEMBL
Match: A0A6J1H1A1 (uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC111459231 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31
Identity = 93/180 (51.67%), Postives = 118/180 (65.56%), Query Frame = 0

Query: 3   VNLEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSS 62
           + L+ L+RDFE    LAEN++ ++R Y++R +   MAYL W R F+FA+       SS+S
Sbjct: 1   MELQWLKRDFE---TLAENKQQKVRYYDSRVNYTTMAYLAWLRFFYFAL-------SSAS 60

Query: 63  SSLDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQ 122
           S+L CVH  MVLGLSL  +F++ L+ L   + L RT  LLD ICK+ + +CQR+ EA+NQ
Sbjct: 61  STLHCVHWPMVLGLSLSSSFLYFLILLQPFIKLYRTHNLLDTICKEHTLICQRILEAMNQ 120

Query: 123 DGGRASSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYA 182
           D       EAG  S+DG  FDF LQVR L DDSF     KVY CAIA AL AVTAFELYA
Sbjct: 121 DA------EAGA-SNDGVRFDFGLQVRALSDDSFCGGEMKVYGCAIAFALLAVTAFELYA 163

BLAST of Spg038906 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 90/185 (48.65%), Postives = 113/185 (61.08%), Query Frame = 0

Query: 5   LEALRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSS 64
           L  L R FE  K + E QESR+R YET+   I   YLI+ RLFFF IS+       +SSS
Sbjct: 3   LGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-------TSSS 62

Query: 65  LDCVHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDG 124
            +C   W++L LSL C+F++ LLFLDAV ML RTQ  LD ICK+  ++ Q++  + NQD 
Sbjct: 63  FNCKDWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQD- 122

Query: 125 GRASSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASN 184
               SME G  S    GF+F    ++L  D FRIVGRKVYI     AL AVTA ELY S 
Sbjct: 123 DVGLSMETGESSG---GFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSK 176

Query: 185 SLLCH 190
            +LC+
Sbjct: 183 YVLCN 176

BLAST of Spg038906 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.0e-27
Identity = 88/182 (48.35%), Postives = 109/182 (59.89%), Query Frame = 0

Query: 8   LRRDFEASKVLAENQESRLRLYETRAHGIAMAYLIWERLFFFAISRASSSSSSSSSSLDC 67
           LRR F   K + E QESR+R +E +   I   YLI  RLFFF IS+ SSS         C
Sbjct: 6   LRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSK--------C 65

Query: 68  VHRWMVLGLSLCCTFVFGLLFLDAVVMLCRTQKLLDFICKKQSDVCQRMSEAVNQDGGRA 127
              W++L LSL C+FV+ LLFLDA   L +T+  LD ICK+  +VCQ++  A NQD    
Sbjct: 66  HDWWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDL 125

Query: 128 SSMEAGGYSSDGFGFDFRLQVRILKDDSFRIVGRKVYICAIAGALFAVTAFELYASNSLL 187
            +ME G + SDGF F F  ++ +L  D FR VGRKVYI     AL AVTA ELY S  LL
Sbjct: 126 -AMEGGDF-SDGFEFGFHEKMLVL--DHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLL 175

Query: 188 CH 190
           C+
Sbjct: 186 CN 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157172.15.3e-3754.14uncharacterized protein LOC111023951 [Momordica charantia][more]
XP_022157130.12.6e-3654.14uncharacterized protein LOC111023927 [Momordica charantia][more]
XP_022957798.14.4e-3151.67uncharacterized protein LOC111459231 [Cucurbita moschata][more]
XP_022157182.14.8e-3048.65uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
KAG6605757.12.4e-2948.40hypothetical protein SDJN03_03074, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DTV62.6e-3754.14uncharacterized protein LOC111023951 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DS871.3e-3654.14uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1H1A12.1e-3151.67uncharacterized protein LOC111459231 OS=Cucurbita moschata OX=3662 GN=LOC1114592... [more]
A0A6J1DSQ02.3e-3048.65uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX747.0e-2748.35uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 1..189
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038906.1Spg038906.1mRNA