Spg038883 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTCTCCGCCACTCTCTCCGCCGCTGATGGAGGCCGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCGTCGGCCTGCCACTCGCCTCTCCGCTCCGACACCTTCCCCAACGCCCACCACCACCACCGCAACCCCACTCAGGAAGCCTCTCGCTTCACTCTCTCCCACTACTCCTCCTCCCGTGGCTCGAACCACGGGACCGGGACCGACAATGGCGAGGCTCGCCTGATTGTCGGTCGGGGCGATGGCCGTGACCGGGACGAGGAGCGGGAGGAAGACGGGGGCGGAGACGGAGACGAGGACGGATATTATGGGAGGAAGAGGAGAGGTTGTTGGAAGACTTATTGTACGTATAGGCATTCGGATTCTAATGCATGGATTTGCTTGCAATTGAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAAGCCTCCCTCACCAATAATTTCTGTTAAGGTAATTTTTCAATTTTTTTTTCTCCAAATTTTATGTTATTTTTTTTTTAATTAATATTGGTACAAATATTGAAATATATTTATAAGGATATATATTTTCTTGTATTTGGGTTGTATGAATGAGTATATAATTTGACCATGTTTAACCATACTTTGATATATACTATTGGAAATTTATATGTTACATTTGTTTGGTTTGGTTTCATATAGATTTGTTTTGTTGATCTTCCATGAGAATAAGCTTAGTGAAATGTTTAGCATTAAAATATTTATCATTAAATTTATGAAATGTAAGACATTAAATTGTTTCAAAGAAAAGTAGGACTACAATGTTAGATGTATATTGTTATATTTTTTCCCAAAATAAATGGATGTCTTAACCTTTTCTTTTCTTTAACAAATTTATTGCTACCATTCAAAAATAGGATGAATTGGTGCACTTTTCAATTATACCATTTTCATTGTTGTGTGTATATGCATATGTATATTGAGTAACAACAATTGAGGGTGGAGAATTGAACCATTGTTCTTTTAAAATGGTAATTGGTGTATTGTCTACTGAACTATTGCATGGATTGACATTTTTGTTGGGTAAATATTAAAATTGACTAATGATAAAGATTGCATATATCATGCAATGTAAGCTTATAATCAACTAATTTTAACATTCATCGACAATGAGGAGATAATTGAAAAATGTTAAAACACAAGGAACTAAAAATGGAAAGATTAAAATAATGAAGGCTAAATTTAAAAAAATTTAAATATTAGAGACTAAAACATATATCAGACCTTTTCCTCGACACAACATATTGTGTAAATGTTGGAAATACACCTGCTAAAAACCTTTTTTTTTTTTTTAATAAAAAGAATCATAAAAGATTATTATTATTATTATTTTTATTTCTTCTTCCTTTTCATAAGACTATATAATGGTGTATTCAATCTTGCCCTATAAACTTTCAAACTTTTAATTTTAACTTTTTTACCACATCAAAATGACTAACATGAGAACAGTAGTTAAGACATTTACTCATTTCTTAAAAGTCAAATGTTCAAATCTCCACTTTTCACGATGGTTCGGAAAAAAAATTTCCTAATGGAATTATATAATTCAACCATCAAATCAATAATTCATGTAATTCACAAAGACGAAACCATTTCTTCATGTATAGTTTTAGGGCAAAAGTAAAATCTTATAGGTCATACACATGTCTCCGATCGTCTCACTTCGTGCTTTCATAAATAGTTATACCAAATAGTCGAATCACGACACAATTTTCAAACCCTCCAAAAATTGAAGGACACATCTAAATTTTTTTTTAGAAGTCTATAATTTAGTCAAATTTAAAAATGATGCAGGTGGGAGAAGTAGAAGAATTTATGCTTGGGGAAGGAGTGGATAAAACAGGGGTTGGAACTAAGATCTTAACATGCAATTGCACAATGAATCTAATTGTGGACAATCACTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCCATTGCTACTTCACAAGTAAGCCCTCTATCATTTTCTTTCTTAAATTCCTTTACTATATTGTGTTTTTTAGTTTTTTCCCGGTTCAATTACAAGGTTAGTCTCTGAACTTTTAGAGTTCTGTCAATTTAGTCCCTAAACCTTAAAATGGTGTCAAATAGATCTTCAAACTTTCAATTTTGTGTCTAATGGGTCCTTGAACTTTAAAAAGTATCCAGGGTCCTTAAACTTTTACTTTTGTATCAAATAGATCCCTCAACTTTTAATTTTGTGTCTATAAGTCATTGACCTATTTGACATTTTTTAAAATTCACAAGTCTACTAGATACAAAATTGGCAAAGTACTGTAGGGTCCCAATAGGCATAAAATTCAATTTTATATCTAATAGATTGGTTAATTTTTAAAAATTTCGAATATTCGAGGGATCTATTAGACACAAAATTGAAAGTTTAAGGGCTAAATTGACATAACATTGAAAGTTCAGGAACTAAACTTGTAATTTAATATATTTTTTTTCAGTTATCTTTATTAATTAAGATTTTAAGTATTTTATACTTTTTTTTTTTTGTTAAGGGTATGAGGACCAAAGTTCTCTGTTGTGGTTAGATTTTTTTTTTTTTTTTTTTTTAAAAAGATTGTGAATTTATAAGAAAGAACAATATTAATGCCCCAATAAATAGCAAGATTATTTTTCAATTATCTTGAATATAATGCTGAGCATAGCTCATCGGTAGTTGGCATGTCCTCTTTTCTTTAAGGATGGAAAACCTCCATTTCTCACACAGTTTTTTTAAGAAACTTTTTGATTAGAATTCAAGAGTAAACCCAAAGTATGAACTAAGATTAAAATAGACTATATCATACCCATATCAAGATGCCCCAATAATCTGTTGCATAAGAATGAATTTTTTATTTTTTTTTAAATCAACTAAACTTTATTAGTTGAGTTGTTATTACTTATTAAGTTCGATGTAAAATTTTTTTTTGACAGTTTTAGTAACTAGTAAGTCAGCAAGCAATTTAAACTTTTTATTTTTATTTTTATTTGACAATATGTTGGAGGTTGGGGGATTCAAAAACCACAAACCTCGTGATCATTAGTAACAAAAATTCAATTCTATATTTAATGTGGGTTTTTGAAATAGGGTCCAAGAATGTATGCTGAGAGCGGAACGACCACGTTTCAATTAAGTGTAGGCATTAGCAATAAGCCAATGTATGGTGCAGGGAGGGACATGGAAGACATGCTTGAATCAGGAACAGGATTGGAGCTTAGAATTCAACTCAATTTCATTTCCAACTATAGGGTAGTTTGGAAAATCATAAGGCCCCGCTTTCATCGCCGTGTCGAATGCACATTGGTCCTCGGAAAAGCGTACGATAGGAAGCGTCACACCCGATCATTCAATAGCACCTGCCTAACTTCTTGATCATTGTCAACCAACAAATTTTGCTTCTAAATGATT ATGGAGGCCGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCGTCGGCCTGCCACTCGCCTCTCCGCTCCGACACCTTCCCCAACGCCCACCACCACCACCGCAACCCCACTCAGGAAGCCTCTCGCTTCACTCTCTCCCACTACTCCTCCTCCCGTGGCTCGAACCACGGGACCGGGACCGACAATGGCGAGGCTCGCCTGATTGTCGGTCGGGGCGATGGCCGTGACCGGGACGAGGAGCGGGAGGAAGACGGGGGCGGAGACGGAGACGAGGACGGATATTATGGGAGGAAGAGGAGAGGTTGTTGGAAGACTTATTGTACGTATAGGCATTCGGATTCTAATGCATGGATTTGCTTGCAATTGAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAAGCCTCCCTCACCAATAATTTCTGTTAAGGTGGGAGAAGTAGAAGAATTTATGCTTGGGGAAGGAGTGGATAAAACAGGGGTTGGAACTAAGATCTTAACATGCAATTGCACAATGAATCTAATTGTGGACAATCACTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCCATTGCTACTTCACAAGGTCCAAGAATGTATGCTGAGAGCGGAACGACCACGTTTCAATTAAGTGTAGGCATTAGCAATAAGCCAATGTATGGTGCAGGGAGGGACATGGAAGACATGCTTGAATCAGGAACAGGATTGGAGCTTAGAATTCAACTCAATTTCATTTCCAACTATAGGGTAGTTTGGAAAATCATAAGGCCCCGCTTTCATCGCCGTGTCGAATGCACATTGGTCCTCGGAAAAGCGTACGATAGGAAGCGTCACACCCGATCATTCAATAGCACCTGCCTAACTTCTTGA ATGGAGGCCGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCATATCCATGTGCTTATTACGTCCAAAGCCCCTCCACCCTCTCCCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCGTCGGCCTGCCACTCGCCTCTCCGCTCCGACACCTTCCCCAACGCCCACCACCACCACCGCAACCCCACTCAGGAAGCCTCTCGCTTCACTCTCTCCCACTACTCCTCCTCCCGTGGCTCGAACCACGGGACCGGGACCGACAATGGCGAGGCTCGCCTGATTGTCGGTCGGGGCGATGGCCGTGACCGGGACGAGGAGCGGGAGGAAGACGGGGGCGGAGACGGAGACGAGGACGGATATTATGGGAGGAAGAGGAGAGGTTGTTGGAAGACTTATTGTACGTATAGGCATTCGGATTCTAATGCATGGATTTGCTTGCAATTGAGTTGGAGGGCAATTTTCAGCATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAAGCCTCCCTCACCAATAATTTCTGTTAAGGTGGGAGAAGTAGAAGAATTTATGCTTGGGGAAGGAGTGGATAAAACAGGGGTTGGAACTAAGATCTTAACATGCAATTGCACAATGAATCTAATTGTGGACAATCACTCTAAGCTCTTTGGCCTTCACATTCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCCATTGCTACTTCACAAGGTCCAAGAATGTATGCTGAGAGCGGAACGACCACGTTTCAATTAAGTGTAGGCATTAGCAATAAGCCAATGTATGGTGCAGGGAGGGACATGGAAGACATGCTTGAATCAGGAACAGGATTGGAGCTTAGAATTCAACTCAATTTCATTTCCAACTATAGGGTAGTTTGGAAAATCATAAGGCCCCGCTTTCATCGCCGTGTCGAATGCACATTGGTCCTCGGAAAAGCGTACGATAGGAAGCGTCACACCCGATCATTCAATAGCACCTGCCTAACTTCTTGA MEAAEEQEAVLFHSYPCAYYVQSPSTLSHANSSDIRNPAESSACHSPLRSDTFPNAHHHHRNPTQEASRFTLSHYSSSRGSNHGTGTDNGEARLIVGRGDGRDRDEEREEDGGGDGDEDGYYGRKRRGCWKTYCTYRHSDSNAWICLQLSWRAIFSMGIALLVFYIVTKPPSPIISVKVGEVEEFMLGEGVDKTGVGTKILTCNCTMNLIVDNHSKLFGLHILPPSLHMSFGPLPIATSQGPRMYAESGTTTFQLSVGISNKPMYGAGRDMEDMLESGTGLELRIQLNFISNYRVVWKIIRPRFHRRVECTLVLGKAYDRKRHTRSFNSTCLTS Homology
BLAST of Spg038883 vs. NCBI nr
Match: XP_038905771.1 (uncharacterized protein LOC120091726 [Benincasa hispida]) HSP 1 Score: 598.6 bits (1542), Expect = 3.3e-167 Identity = 299/337 (88.72%), Postives = 312/337 (92.58%), Query Frame = 0
BLAST of Spg038883 vs. NCBI nr
Match: XP_008461795.2 (PREDICTED: uncharacterized protein LOC103500312 [Cucumis melo]) HSP 1 Score: 575.5 bits (1482), Expect = 3.0e-160 Identity = 285/336 (84.82%), Postives = 305/336 (90.77%), Query Frame = 0
BLAST of Spg038883 vs. NCBI nr
Match: XP_004149613.1 (uncharacterized protein LOC101209149 [Cucumis sativus] >KGN58592.1 hypothetical protein Csa_002328 [Cucumis sativus]) HSP 1 Score: 568.5 bits (1464), Expect = 3.7e-158 Identity = 283/335 (84.48%), Postives = 302/335 (90.15%), Query Frame = 0
BLAST of Spg038883 vs. NCBI nr
Match: XP_022152674.1 (uncharacterized protein LOC111020336 [Momordica charantia]) HSP 1 Score: 565.5 bits (1456), Expect = 3.1e-157 Identity = 288/335 (85.97%), Postives = 304/335 (90.75%), Query Frame = 0
BLAST of Spg038883 vs. NCBI nr
Match: XP_022934269.1 (uncharacterized protein LOC111441481 [Cucurbita moschata]) HSP 1 Score: 558.5 bits (1438), Expect = 3.8e-155 Identity = 277/336 (82.44%), Postives = 303/336 (90.18%), Query Frame = 0
BLAST of Spg038883 vs. ExPASy TrEMBL
Match: A0A1S3CFE9 (uncharacterized protein LOC103500312 OS=Cucumis melo OX=3656 GN=LOC103500312 PE=4 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 1.5e-160 Identity = 285/336 (84.82%), Postives = 305/336 (90.77%), Query Frame = 0
BLAST of Spg038883 vs. ExPASy TrEMBL
Match: A0A0A0LD21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696870 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158 Identity = 283/335 (84.48%), Postives = 302/335 (90.15%), Query Frame = 0
BLAST of Spg038883 vs. ExPASy TrEMBL
Match: A0A6J1DGR2 (uncharacterized protein LOC111020336 OS=Momordica charantia OX=3673 GN=LOC111020336 PE=4 SV=1) HSP 1 Score: 565.5 bits (1456), Expect = 1.5e-157 Identity = 288/335 (85.97%), Postives = 304/335 (90.75%), Query Frame = 0
BLAST of Spg038883 vs. ExPASy TrEMBL
Match: A0A6J1F239 (uncharacterized protein LOC111441481 OS=Cucurbita moschata OX=3662 GN=LOC111441481 PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 1.9e-155 Identity = 277/336 (82.44%), Postives = 303/336 (90.18%), Query Frame = 0
BLAST of Spg038883 vs. ExPASy TrEMBL
Match: A0A6J1J6W9 (uncharacterized protein LOC111481909 OS=Cucurbita maxima OX=3661 GN=LOC111481909 PE=4 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 5.6e-152 Identity = 272/336 (80.95%), Postives = 300/336 (89.29%), Query Frame = 0
BLAST of Spg038883 vs. TAIR 10
Match: AT3G08490.1 (BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 207.6 bits (527), Expect = 1.5e-53 Identity = 101/187 (54.01%), Postives = 134/187 (71.66%), Query Frame = 0
BLAST of Spg038883 vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14 Identity = 42/160 (26.25%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of Spg038883 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 2.3e-09 Identity = 74/319 (23.20%), Postives = 128/319 (40.13%), Query Frame = 0
BLAST of Spg038883 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 6.8e-09 Identity = 81/324 (25.00%), Postives = 134/324 (41.36%), Query Frame = 0
BLAST of Spg038883 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06 Identity = 69/297 (23.23%), Postives = 121/297 (40.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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