Spg038872 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038872
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein TOPLESS
Location	scaffold12: 305503 .. 309698 (+)
RNA-Seq Expression	Spg038872
Synteny	Spg038872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGCTACCAAGTAATTGGATTAGGTTTGTTTGTTTTAGTGCCATGGCCGAGCGAATGATGCAAGATCTGACAGCTCTTGATCAAAGTTATCTCTCATCTCTTGGAGACCTTGAGAAATCATATACATCATCCAAGCGCTTGAGGAAGAATTTCACAAGTACTGGGATCGCTTCAATGAGTTATGTGCGCTTCCTTATCGCCCACTATACGAGGAGTCCTTACTTCTGCACTTCATTGAGGTACTAGCATCTGACGATAGAAGGATCTTGGATATAGCGAGTGGTGGTGATGTGCTGGATAAAACACCTAGTGAGGCTAGAGAGATAATTTCGAGCTTGGCAGCGTATGTTGGACTCATCATATGGCAGACACGAAAGGTAAATTCTTCCCATTCCTTGATTAGTTAAGATTCTGAGCAACAACAAGAAGGTAACTACAATGAGGTCGGTAAGTCTGAGCTTGAGCCTTCTTTATACTTTGAGTCTGATTCTTGTGATTCCCCTTGCATTATAGGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTGACCAGTTTGTTGCTCAATATAAATGTGTTTTGATTAATATGTTGGGGATGATGACGATTTGCTTGTTTGAATTTTCTCATTCTTTGCACTCTGTGTGCCAATTTAATTTGTCTGTGCAGGAGCTGATCAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCAGATGAAAAGCGAGGAGAATCTGGTCGAGCAAACGACCTTAAACATTTGCACCGAATAAGGTTACTGCTTTCTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAAAGCGAGCCCTTTTATTTGTATGTAAACGTGATTCACCACCCACGAGCTTTAATTCAGGGAAGTTTCTATTCTTTCCTTATGCATTTGTCTTGTTTTACATGATCTATTACATTGAGGACAATGTAACCTTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGGCCCTGAGCATCTGTGCGTCGGGCCAACGTTTGTGCTTAATGTATATCTTGCATGTCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGATTAGCCCTGAGCATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTCTTGTGTATATATTTGCTTTAGTGATAATGATTTTCTAGGATTGGCTCAAATTTTTCGAAAATTTATAGCTTTCGATGAGTTGTGATCATGAGTGCCCCAAAAGGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGCACAGGTTGGGTGTCTTTCTTGCTTTAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAACTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTTTAGCGAGAAAGTCTAAATTTTTTGCAAAATAGTGTGTGGAGTCTTGCCTAGGAGAGAAACAAAAAATACGCCTGCCATAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAGAATTCCAGAAATTGCTTATTCAATTCAATGATGCATTACATTAACAAATACATTACTTAAAATTAAGTAAATTGAAAATTTTTATTTGAGTAATTCCATTATTATTATTTAATTTATAAATATAAATTAATTAATAAATAATTTATTATATTTATAAGAATAAGAATAATTTATTATATTTCAGGCACCTAGGCAAGGAGGAAGCAACCTAGTTTGTTCCATTTAGACTTTTTAGCAAGACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTTAGTAAACCAATCCCGGGTTAGTAAAGTCTTCTTTAGGTGGGAAAGAACTCTCTTGTGCAAGATTGTCTTTGGAAACTTTTGACTTGTCTCCTCATTGGGTCTCATGCGAATGTCTCTTGATTGGTTAGGTTTTTGAATGTTTGAGCTTTGAGGATTAAATCACTTTACACTTATATGCACAACATCTTTTCTTTGGTTTGTGTGTGTCTTGCTTGAGGACTAGCAATATTTAGGTTGGGGGTATTTGATAGCACCTGATTCGTGCTATTTTAGTTAAATTCCCTTTTAATCGATGTGATAAAGTAACTTTAGTCAGATATTTTTTCCTTGCATTTGCTACTAATATGAATCTCTACAGAACTTGAGGCATTTGCATTTCCTTGCTTTCTTTTATTTGGGCCTTGAATTTGCTGTGATGTGTATTAAATTTTTGTTTGTTCTCACTGCCTCTTACTTTTGTCATATAATGAAGGTAAATCTACCGATTAATGTTCTACCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGACTGTTATGCGAACATTGAATCAAGGGTCATCTCCATTGTGCATGGATTTTCATCCAGTCCAACAAACTCTGCTATTGGTATATTTAAATTTATTTTGTATAATTTTATTTTTTTGGTTTTAAGCTACCAATAGAACAATGTAGTTGTAGATGGTATGTGTCTCTATTTTTGATATTCACATTAAAATTGACAAATAATGAAAATTCTGTTTTCAATTGGCACAAATGTAGGTAAAATAGGATTGTGGGATGTTGGAGCCTTGATGGTGCATTATCTGGTAAGATTGTATGTTTACTTGTGAATTTTATGTCATCATCAAACTGGGCACTGGTTGTTGAATGAATGCCAATCTTGTATAGGTATTGCCTACTGAAGCACATTGTTCAAATATACTCCTTTCATGGGATCATGGGGGTGATGACATGTGACAGCACATGGAGGTGTGTGATTAAAAGTACTGTATCTATTTGTGTTTACTCTTCCCTGCTTGTAGCACGACACTGAAATTTGTGAATGAGATTGATGCTCATCTCGGTGGAGTTAATGATCTAGCTTTCTCCAATCCCAATAAACAACTTTGTGTCGTAATGGGTGGGGATGACAAGACCATTAAAGTAAGTTATTTGTTTCTTATTTGTCACTGCAGGGTCTTCTATTTGTTGACAATTCTTTTCTTTTTGGATTTTGTTAGGTTGGATGCTGACAATGGTGCAACGTAACGGTAATATACATTTGATTGAAGGCCAGGAGGCTCATGTTTTCTCTTTTTGCCCCAACTACAGGGAAAATATTCAGGTTTGCCTTTCATGTGCTACACTGGGTTTTGTTGAGGCTACTTGATACTTATTCTGCCTAATCTGCTGCACAGCATGGAAAGATAAAGGCATGACTATATGATAATATGGGTTCACGAGTTATGATGCTCCTCAGTGTTGGTGCACAACGATGGCTTATATTGAAGATGGTATGTGGTAAGAAATACTTAGCTGTGTGGGGGATACTTGGACTTAACAATGTAAAGAATTATACAACTTCTTTATTTTTCTCACTTTCATGGTTTGGTGATGGATGTTTTAGGCTCTTCTCATGTGGGACAAGTAATGATGGAGAGTCTTATATTGTTGAGTGGAATGAGAGTGAAGGAGCAGTTAAGAGAACTTACCAAGGGTTCCTCAAGCGGTCTCTGGGTGCTGTAAGTTGGATACAACTACAAATCTGTTTTTTGGCAGCAGGTGATGATCTCCATTAAATTTTGAGACATGGACAATGTTCAACTTTTGATGACCGTAGATGCTGATGGAGGAGTTTGTGCAAGTTTCCCGGTAAGTTTCCGTGCAAGTCAATTGAAAAATTAGAAGAAAATTGTAATTAACATTTGCATACTGTTTTCTGTTCATTCCCTTTAATATCAAAGGCAAGTCCACGCATCTGCTTTAACAAGGATTGGTCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAGCTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGGTAGTTTGATTCTATGTTCAATTAATGTGACTTTTAACCATGTTAACTCTTTTGCTTAATATCTAATTAACTTATATTTAATTTTTGCAGCCCACAGTAAATCCAATTTCAACTGCTACTGGTAGTGTAGGCCTTGCTGAGAGAGCATAG

mRNA sequence

ATGGTTGAGCTACCAAGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTGACCAGATTGGCGGTGTAAGGGTCATCTCCATTGTGCATGGATTTTCATCCAGTCCAACAAACTCTGCTATTGGTAAAATAGGATTGTGGGATGTTGGAGCCTTGATGGTGCATTATCTGGTAAGATTCACGACACTGAAATTTGTGAATGAGATTGATGCTCATCTCGGTGGAGTTAATGATCTAGCTTTCTCCAATCCCAATAAACAACTTTGTGTCGTAATGGGTGGGGATGACAAGACCATTAAAGCCAGGAGGCTCATGTTTTCTCTTTTTGCCCCAACTACAGGGAAAATATTCAGGCTCTTCTCATGTGGGACAAGTAATGATGGAGAGTCTTATATTGTTGAGTGGAATGAGAGTGAAGGAGCAGTTAAGAGAACTTACCAAGGGTTCCTCAAGCGGTCTCTGGGTGCTGCAAGTCCACGCATCTGCTTTAACAAGGATTGGTCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAGCTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGCCCACAGTAAATCCAATTTCAACTGCTACTGGTAGTGTAGGCCTTGCTGAGAGAGCATAG

Coding sequence (CDS)

ATGGTTGAGCTACCAAGAGAGATGGAAATAGTTGATGAATTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTAAATTGCATGAGTTAGATTTTGTAATTCCAATAGCTGACCAGATTGGCGGTGTAAGGGTCATCTCCATTGTGCATGGATTTTCATCCAGTCCAACAAACTCTGCTATTGGTAAAATAGGATTGTGGGATGTTGGAGCCTTGATGGTGCATTATCTGGTAAGATTCACGACACTGAAATTTGTGAATGAGATTGATGCTCATCTCGGTGGAGTTAATGATCTAGCTTTCTCCAATCCCAATAAACAACTTTGTGTCGTAATGGGTGGGGATGACAAGACCATTAAAGCCAGGAGGCTCATGTTTTCTCTTTTTGCCCCAACTACAGGGAAAATATTCAGGCTCTTCTCATGTGGGACAAGTAATGATGGAGAGTCTTATATTGTTGAGTGGAATGAGAGTGAAGGAGCAGTTAAGAGAACTTACCAAGGGTTCCTCAAGCGGTCTCTGGGTGCTGCAAGTCCACGCATCTGCTTTAACAAGGATTGGTCCCTTTTTGCTGTTTCTAGCAATGAGAATGGAATTAAAATCTTAGCAAATGTGGATGGAATCCAGCTATTGCAAGCATTTGAAAATCTTTCTTATGATGCATCTAGAACGTCAGAGGCCGGGATAAAGCCCACAGTAAATCCAATTTCAACTGCTACTGGTAGTGTAGGCCTTGCTGAGAGAGCATAG

Protein sequence

MVELPREMEIVDELALVDSMSISISPELTSPKLHELDFVIPIADQIGGVRVISIVHGFSSSPTNSAIGKIGLWDVGALMVHYLVRFTTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKARRLMFSLFAPTTGKIFRLFSCGTSNDGESYIVEWNESEGAVKRTYQGFLKRSLGAASPRICFNKDWSLFAVSSNENGIKILANVDGIQLLQAFENLSYDASRTSEAGIKPTVNPISTATGSVGLAERA

Homology

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BLAST of Spg038872 vs. NCBI nr
Match: XP_022153396.1 (protein TOPLESS [Momordica charantia])

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-46
Identity = 126/266 (47.37%), Postives = 134/266 (50.38%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHIGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGTRQYTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 255
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. NCBI nr
Match: PON51665.1 (Topless-like WD40 repeat containing protein [Parasponia andersonii])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-45
Identity = 121/259 (46.72%), Postives = 134/259 (51.74%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFS+PNKQLCV+  GDDKTIK                           
Sbjct: 454 EIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYSFEGHEAPVYSVCPHY 513

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 514 KENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 573

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 574 FIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 633

[Close]

BLAST of Spg038872 vs. NCBI nr
Match: XP_023526905.1 (protein TPR3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-45
Identity = 121/256 (47.27%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. NCBI nr
Match: KAG7018371.1 (Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-45
Identity = 121/256 (47.27%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. NCBI nr
Match: XP_022955701.1 (protein TOPLESS [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-45
Identity = 121/256 (47.27%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 102/260 (39.23%), Postives = 126/260 (48.46%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND+AF++PNKQLC++  GDDKTIK                           
Sbjct: 452 EIDAHVGGVNDIAFAHPNKQLCIITCGDDKTIKVWEATSGAKQFTFEGHEAPVYSVCPHY 511

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 512 KENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGHWCTTMAYSADGSRLFSCGTSKDGES 571

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           ++VEWNESEGAVKRTYQGF KRS+G                                   
Sbjct: 572 HLVEWNESEGAVKRTYQGFRKRSMGVVQFDTTRNRFLAAGDEFLIKIWDMDNTSLLTTID 631

[Close]

BLAST of Spg038872 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-35
Identity = 104/263 (39.54%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND++FS PNKQLCV+  GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636

[Close]

BLAST of Spg038872 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 145.2 bits (365), Expect = 1.0e-33
Identity = 97/250 (38.80%), Postives = 113/250 (45.20%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND+AFS PNKQLCV   GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 247
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAID 636

[Close]

BLAST of Spg038872 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 92/253 (36.36%), Postives = 113/253 (44.66%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND+AFS+PNK L ++  GDDK IK                           
Sbjct: 448 EIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHY 507

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DG+S
Sbjct: 508 KESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDS 567

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 250
           ++VEWNE+EGA+KRTY GF KRSLG                                   
Sbjct: 568 HLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTD 627

[Close]

BLAST of Spg038872 vs. ExPASy Swiss-Prot
Match: Q9LRZ0 (Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28
Identity = 90/271 (33.21%), Postives = 120/271 (44.28%), Query Frame = 0


Query: 79  MVH-YLVRFTTLKFVNEIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA---------- 138
           ++H Y  + + L+   EIDAH+G VNDLAF++PNKQ+CVV  GDDK IK           
Sbjct: 432 LIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKLFT 491

Query: 139 ----------------RRLMFSLFAPTTGKI----------------------------- 198
                             + F       GKI                             
Sbjct: 492 FEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSAD 551

Query: 199 -FRLFSCGTSNDGESYIVEWNESEGAVKRTYQGFLKRSLGAAS----------------- 250
             RLFSCGTS +G+S++VEWNESEGA+KRTY GF K+S G                    
Sbjct: 552 GSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQI 611

[Close]

BLAST of Spg038872 vs. ExPASy TrEMBL
Match: A0A6J1DKI7 (protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 8.3e-47
Identity = 126/266 (47.37%), Postives = 134/266 (50.38%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHIGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGTRQYTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 255
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. ExPASy TrEMBL
Match: A0A2P5BSC8 (Topless-like WD40 repeat containing protein OS=Parasponia andersonii OX=3476 GN=PanTPL PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46
Identity = 121/259 (46.72%), Postives = 134/259 (51.74%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFS+PNKQLCV+  GDDKTIK                           
Sbjct: 454 EIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYSFEGHEAPVYSVCPHY 513

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 514 KENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 573

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 574 FIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 633

[Close]

BLAST of Spg038872 vs. ExPASy TrEMBL
Match: A0A6J1IYH0 (protein TOPLESS OS=Cucurbita maxima OX=3661 GN=LOC111479634 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.1e-46
Identity = 121/256 (47.27%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. ExPASy TrEMBL
Match: A0A6J1GUK9 (protein TOPLESS OS=Cucurbita moschata OX=3662 GN=LOC111457623 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.1e-46
Identity = 121/256 (47.27%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAGNGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. ExPASy TrEMBL
Match: A0A6J1KEV5 (protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 5.9e-45
Identity = 120/256 (46.88%), Postives = 128/256 (50.00%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVNDLAFSNPNKQLCV+  GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDLAFSNPNKQLCVITCGDDKTIKVWDAANGARQFTFEGHEAPVYSVCPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KESIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 253
           YIVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 YIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVD 635

[Close]

BLAST of Spg038872 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 104/263 (39.54%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND++FS PNKQLCV+  GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636

[Close]

BLAST of Spg038872 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 104/263 (39.54%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND++FS PNKQLCV+  GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636

[Close]

BLAST of Spg038872 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 104/263 (39.54%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND++FS PNKQLCV+  GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636

[Close]

BLAST of Spg038872 vs. TAIR 10
Match: AT1G15750.4 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 104/263 (39.54%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND++FS PNKQLCV+  GDDKTIK                           
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 256
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAID 636

[Close]

BLAST of Spg038872 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 145.2 bits (365), Expect = 7.2e-35
Identity = 97/250 (38.80%), Postives = 113/250 (45.20%), Query Frame = 0


Query: 94  EIDAHLGGVNDLAFSNPNKQLCVVMGGDDKTIKA-------------------------- 153
           EIDAH+GGVND+AFS PNKQLCV   GDDKTIK                           
Sbjct: 456 EIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHY 515

Query: 154 -RRLMFSLFAPTTGKI------------------------------FRLFSCGTSNDGES 213
              + F       GKI                               RLFSCGTS DGES
Sbjct: 516 KENIQFIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGES 575

Query: 214 YIVEWNESEGAVKRTYQGFLKRSLGA---------------------------------- 247
           +IVEWNESEGAVKRTYQGF KRSLG                                   
Sbjct: 576 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAID 635

The following BLAST results are available for this feature:

BLAST of Spg038872 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153396.1	1.7e-46	47.37	protein TOPLESS [Momordica charantia]	[more]
PON51665.1	1.4e-45	46.72	Topless-like WD40 repeat containing protein [Parasponia andersonii]	[more]
XP_023526905.1	1.9e-45	47.27	protein TPR3-like [Cucurbita pepo subsp. pepo]	[more]
KAG7018371.1	1.9e-45	47.27	Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022955701.1	1.9e-45	47.27	protein TOPLESS [Cucurbita moschata]	[more]

BLAST of Spg038872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10NY2	1.8e-38	39.23	Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1	[more]
Q94AI7	1.8e-35	39.54	Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1	[more]
Q0WV90	1.0e-33	38.80	Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3	[more]
Q0J7U6	2.3e-30	36.36	Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TP...	[more]
Q9LRZ0	1.7e-28	33.21	Topless-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=TPR2 PE=1 SV=2	[more]

BLAST of Spg038872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKI7	8.3e-47	47.37	protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1	[more]
A0A2P5BSC8	7.0e-46	46.72	Topless-like WD40 repeat containing protein OS=Parasponia andersonii OX=3476 GN=...	[more]
A0A6J1IYH0	9.1e-46	47.27	protein TOPLESS OS=Cucurbita maxima OX=3661 GN=LOC111479634 PE=4 SV=1	[more]
A0A6J1GUK9	9.1e-46	47.27	protein TOPLESS OS=Cucurbita moschata OX=3662 GN=LOC111457623 PE=4 SV=1	[more]
A0A6J1KEV5	5.9e-45	46.88	protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1	[more]

BLAST of Spg038872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15750.1	1.3e-36	39.54	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.2	1.3e-36	39.54	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.3	1.3e-36	39.54	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.4	1.3e-36	39.54	Transducin family protein / WD-40 repeat family protein	[more]
AT1G80490.1	7.2e-35	38.80	TOPLESS-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 58..232 e-value: 2.1E-9 score: 39.3
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 93..127
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 143..182 coord: 183..255
None	No IPR available	PANTHER	PTHR44083:SF7	TOPLESS-LIKE PROTEIN	coord: 143..182 coord: 183..255
None	No IPR available	PANTHER	PTHR44083:SF7	TOPLESS-LIKE PROTEIN	coord: 93..127
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 86..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038872.1	Spg038872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding