Spg038855 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCGTTTTATCGACGAATTTTTGTGTGTAAAAACCTGAACCTTTTCCATCTCCACTGCTTCTTCTTCTGATTCTCGTTCTTCGTTTATGGTGTCTAATAATCCCAATCCTTCTGAGGGATTCTATTTGGATCCATCGGGAATGGCGTTGCCGGGGCTTGGACCTTTTGCCACCACTATGGCGGCGTCGACGGCGGCGTCGGAGGATATGTCTAAGAAGATTCGTAAGCCCTACACAATTACCAAGTCTAGAGAGAGCTGGACTGAGCCTGAGCACGACAAGTTCCTTGAAGCGCTTCAGCTGTACGTTTTTCGTCCTTGCTCAACTCAATTCTGTTGCTTTCTTTCTTCTTTAGGGTTTTCCAATTCGATGCGTGTTGTGTGGTGGAGTTTGGTTTTTTATTTGGGTTTTTGAGTGGGAGCTTGGTGGCGAAGGAAATGTGCAAAATGTGGGGAATTGGAGGCTAATTTTGGGTTTTAGTGGTTGAATTTGGGGTTTTTGGGATGTTGTGGTAGGCGTGAGATATTAGGGATGGTTGGTGGATGGAAAATTCTGGGAGCTGGAAAGAAGTGAATATTAGTGGATTTGTAATTGAAACCGAAATGGTGGGGTTTTGAGTAGGGCTTTGATGGGTGAAGGGTTTGAGCTCTATCTGGCTTTCAAAAGGTGTTACGAAAATTCTTCAATGCCACTTTGGTGTATGACTGTTTTTAATTAGTTTAACTTCTTCCGCTATACTAGGAAATAATATGTTCCATGTTCCCTACATGTAGGACTGATAATTGATCCTACTTGGAATTAGGCATTAGTAAAGTTAGAAAAGAGAGGGGATATTGAGGTTGTAAGTTGTTAATGGAGTCGTTAGGCACAAGAAAAGGTGGAAAAGCAAGAGATATTAGGGTTGCGGTTGTTAATGGAGTATGGAGAAGAAGTTAATTTTGTGAATCTAAATTCTTTAATTAGGTGCAAGGACTAAGACTATGATGTATGGCTTGTCCATTTAAAAGTTGGAAATAGAGAGACCAGGGGGTAGGAAACTAATTGTGGTTACTACATACTGTTCTTTTTTCAAGCTTTACTTGACAGGTGCCTAAGTATGAGTCTCTAATATTTTTTCATTCCATATCCAGTTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCAAAAACTGTTATACAGGTAATTGATGCCAAATCCCTGTTATTTGCAACTTACATTCGTTGGGAGTGCTAATTGAACTCTTCTGAACTATAGTGATTGTTCCAAATGCACCCATAATCCTTGACCTTTTATAATTAGGAAAATTGGACCTGTCTTTGACTTAATTAAAAATTTTGTCAATTGGGCAAACTCCTTAAAAAGAAACCATCACTTTTGCCTTATCTAATTAGGCTAGACTTTTTATTCTTTTTTTTTTTTTTGGGTCAAAATTTTCCTTTGTCATATCTGAAAATACGCCTTGTATATTAGTGAAAGCAACACTGACAACTTGGAAACTAAGCATATAATCAATTTTGTAATTATAAGACCATGGACAATCCAATTATTATGTTTAAGCAATGAATTTTTAATAGGTTAACTTCTGGGTCCAATTTTTCAAATTTTACAACTAAAAGTTCATGGGTGCATGGACAGTTCAAGGTAGTTTGTGCAATTTTCCATATACATTTTAATTTATGAATGATATCCCCTACAGATACGTAGTCATGCACAGAAGTACTTCTTAAAAGTTCAAAAAACTGGAGGTGGTGAGCATTTGCCTCCTCCACGACCAAAAAGGAAGGCTGCTCATCCATATCCTCAGAAGGCTTCAAAAAATGGTTAGTCACCCTCCACCACCACCACCACCACGTCCTTCAATATGCTTAGTATCACTAAATGTTGTAAAAGTGGCTCACAAATCTCATGTGTACTATTTGTCAGTTGCCATGCCTTCTCAAGTGCCAGGGTCATTTCAGTCAACGTCTCCTCTAGTCGAACCTGGGTACATTATAAAGCCAGATTCATCTTCAATACTTACATGTCCGGCACCAGCTGCAGCTGTACCTTCTTGGACAGTGAACTCTGTCCAGCCACTCAATTCATCACAAGGTATCAAAGGCTAAATATTAGATGTGCATTGAAATCATAATTTTTTTCATAACTTCTTACAATACGAGTGAGTCACATTGGATAAGATGGATGTAATTAGATGCCTTAAAAACCTAGCGCGATATCGCCTAGGGCTACCATGCATGGAAAATTTGGAAGGAGAGATATGAGGGTGTCTAGGATGCAGGTGTTATTAGGATTACGTGAAGTTCTTTGTGTCTGTAGGGTCTACCATTATTGAGTTCTGTGAAATGTTTTTATATGTAATGTTTTTGTTTGGTTTATATGTGCATGCAGTGCCAACAACAGCAAATAATTGTTGCAGTAGTACTGAAAGCCCATCAAAAGCATGCCCTCTTGTTGAAACGATTGATCAAGGAAGTAACAATCATTCTCTTAGAGGTGATCCTCTCATTTATTTGCATGTACTTTAAATTATCTTATTGTATTGCAAATAGTTTCCGATTCCATTGAATTATTCTATATGAAAATGTGGATATATATCCTTCCTAGTTAAGTCACAGAGCTCATTAATTAGTTTGAAGTGCTCAATTGCTACTTTTCATGGAAGTAGTAATACATGGAATTTCAATTTTTGTATTTATGGAATCAGAAATTTGGATGTATCAGTCAACAATTAACATGTCCATGCATGTTTTTAGAAGCATGGTGTTAGTGATATAGTCTGGAGAAAAGATTTAATCCTACATATATTCTCATACTTTGAGCACTTGCTCATAGTAAGATATTGACCATTTGTTTTATATAGTATAATTTTTTTGAATGATTAAAGATCTTGATCAGGGTTTGTTTTACAAAATAGTCTACATTCTCATTGCCCACACGGGAATTTTGTAAAAAAGCATCCTGATTTTGACCATGTAGACTGAGACCTTCCGGTGATTATTAAGGGCTTGGAAGGTGCTCATGTATTAGTTTCTTTTGGGGGGGGGCTCGCTCATCCCCTGGCCCTTAGGCTGTATGTGTTTTTTTGGAATGCAGCCTTGTTTGTTTCTTATAAAAAAAAAATATTAAGGGCTTGTATAATCCTTCTCATAGGGGTTTCCCCTTCTTGTAATTCATGCTATCAATGAAATTGTTTCTTATCCAACAAAAGATTATTAAGGGCATGTAATTATCACTTGTAATATCACGAGTAGCCAAAAAATGTGAACAACCTGATTTTTCCTCAAACTTTGGAAGTTGGACAATATTTTTGTACTCTGGTGTTATTATGTTTTCTATGAGCTTTTCTTGTTTTGCTTGTGGTATGATTTGTTTGACAAAGAATGCAGTGAGTTCAACTTGTTGTGGTATGATTTATGAGTTCCTATAAAGTTATTTTTACGATTGTAGTGAATCTTTGATCCCTATTTTCTCTGTATTATTGTTTTTCATGAGACTTAAATGCCCTTTTGGTGTGCAGTTCTGCCAGATTTCTCTCAGGTTTACAGTTTCATCGGCAGTGTCTTTGACCCAAATGCTTCAGGTCATTTGCAAAAATTAAAGAGGATGGACCCAATTGACGTTGAAACTGTATGATTTACACCTTTTTCCCTCTCTACTTCGCAACATTTTTGCTTTAGTTGTATATATATATATATATATATATATATATTTGTGAATTTTACCTCGGACATAGTTGCATAAATATTTATGTGAATTTCATTTTTCTTTTTATTAAGAGTATGAAATTTTATCATAATTATAGTTTAAAAATTTATTACGTATAATATGCATGGTTGACTAAATAATATTCATTTCTTCCGTGTAGGTTCTGCTGTTGATGAGAAACTTATCCATCAATTTGATCAGTCCTGATTTTGAGGATCATGTAAGTACCAGTCATCCTTCATAGTTTTTTCACTTCTTTTATGCTTTTGTAGGTGGAAAAATGAGTTGATAGAAATGTTAAATAACAATATTTTAGATACCTTAAAGATCTTTTTTTTTTTCCCCACTTATTTTCATCTGTGTTGTTTTGAGGGGTCGTATTAAGGCTGCGAGCCGTGGACATTCTAGTTGGATTTCAACTGAACTGGAATGTGGGACACTTGAATTAAGATATAACTATTTCATTTTTCTTTGAACTAGATAACTGGAACAGTTACAGAATGGAATATCTCTTTTATAACAGGATTCTGGGACCATATGTCCCTGTTTACATATTAGGACTGAGTAGAGAAAGGAAAACCATTCTCTCTCATTTGGGCGAGGAGGGATAATTTTACCTGTTTCTGAATTTATAGAAAATGTGTTTGAGAAATGTGATTGGGTGGCTTTTGGATATTGTGATTATTCTGCAACTATTCAGAAGTAGGTGATGATTCTTAAGGGGAAAAAACTATTTTGAGTGTTTTGGGATTGGTCATCTATGTTTAAATTAAGAACCATTCTAGATGATCTGGTTTGATTTGGCATTTTTTCGTTCTTTTTCATTTTTTAGTTACAAACCTTTGCCAGAAGGCAGAAGACATTGGGATATTTATTTACTTAGTACTAGGAACCAGAATAGGATAACAGAATCATTCTCCCCTGCAGAAGATTCTCGTTTTCGTTCCTATCTTATGTTAAGCATTATGGATAAGTTGTATACTCCACCTAGAATGAAAGACATTCTCATTCTTTTGTTCCCTTTATGTGGAGAATGTCATTCTTATTCTCGTTCTCTGATCCTTGTGTACTCCACTTCTTCACCTTATTCTTTTACATTTTTTCTTGTTTCTTTGGACTTATTATGTGTCTAAATCCAATTTAAAATCGATTCTTCAGACATGATTGTCAAAATGATTCTTGTACTTTCAAATTTGGTTTCAAGATATTTCTAGTAAGCATGACTTTAGAAATTTTATTTTGTAACTTCAGATTCATTCTCATTTAGTAAATCAGGTCAATTTTTATTTTAAAATATAAGGCATCTATGGAAATATTTGATCATACACTATTTTTGCTTCAGTTCTAAAACCGCAATATCTGTCATCTTACATGAAATTCTGATTTCTGTATCTTAAACCTTCTATCATAAACTATAAGAACTGACGACTGTTGACTTCTTCCTTGGTTCTCAACAATGTCATTTTACTGCTAGCTATTCATTACTGTAATGTGACTTTCTTCTGAATACATGGTATTGTTATTGACCTTTTCATTTGCTTATTATGCTATTCCTACTTTTCCCTTTGCAGAGGAAGTTGCTCTCATCCTACGAGATTGATTCAGGGCCAATCCGGCATGGCGATATCGATAAGCCCATCTATGTCGATGATCATAAACCCAATTTGGTATCCAACTAGGCACAGGAGGAGGTGTGAACAGCATGCTGCTATTCATGTGTGCACCTTCAACAACACAAACAGAATGCCAACCGATGCCTGAGGGGACTGCCTGAAAATAATAAGCACGACGACCCGAAAAAAGAAACTTGCCAAGTATGTATGCAATGTTGTGAGGTCGTTTGCATTACATTTGTTATCTTCTCTGCTATTTTGATGCGCCTTTATGTATATAACATAACCAAATCCTGTCTTGCCCTTTGTTTGTATAGATGGAGAGCCCTTGAAATAGTGCTGTATAGCCCTTAGGTAGGGAAGCCCTGTATTCAAGTTTTGGCAGTTAATTTGTAAACGGTTTTGTAAACAAAACAATGCTTTCTTTTCTTTCTTTTCCTTTTCACCTTTGAGTTGAAGGAAAAATACCCAATGGTCATGTCTGTTTGACTGTGCCAAGTTATTGTGGTGGGTTACTTTCCAAAGTCATTTTTTCATATTAGGTCAATGTTAGATGTTCCTATCAATGTTTTGTTGAAGCCATTGACATTTTTGAAAAAAGCTAAATATATACTTTAGTTCTTAATGA ATGGTGTCTAATAATCCCAATCCTTCTGAGGGATTCTATTTGGATCCATCGGGAATGGCGTTGCCGGGGCTTGGACCTTTTGCCACCACTATGGCGGCGTCGACGGCGGCGTCGGAGGATATGTCTAAGAAGATTCGTAAGCCCTACACAATTACCAAGTCTAGAGAGAGCTGGACTGAGCCTGAGCACGACAAGTTCCTTGAAGCGCTTCAGCTTTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCAAAAACTGTTATACAGATACGTAGTCATGCACAGAAGTACTTCTTAAAAGTTCAAAAAACTGGAGGTGGTGAGCATTTGCCTCCTCCACGACCAAAAAGGAAGGCTGCTCATCCATATCCTCAGAAGGCTTCAAAAAATGTTGCCATGCCTTCTCAAGTGCCAGGGTCATTTCAGTCAACGTCTCCTCTAGTCGAACCTGGGTACATTATAAAGCCAGATTCATCTTCAATACTTACATGTCCGGCACCAGCTGCAGCTGTACCTTCTTGGACAGTGAACTCTGTCCAGCCACTCAATTCATCACAAGTGCCAACAACAGCAAATAATTGTTGCAGTAGTACTGAAAGCCCATCAAAAGCATGCCCTCTTGTTGAAACGATTGATCAAGGAAGTAACAATCATTCTCTTAGAGGTGATCCTCTCATTTATTTGCATTTCTGCCAGATTTCTCTCAGGTTTACAGTTTCATCGGCAGTGTCTTTGACCCAAATGCTTCAGGTTCTGCTGTTGATGAGAAACTTATCCATCAATTTGATCAGTCCTGATTTTGAGGATCATAGGAAGTTGCTCTCATCCTACGAGATTGATTCAGGGCCAATCCGGCATGGCGATATCGATAAGCCCATCTATGTCGATGATCATAAACCCAATTTGGTATCCAACTAG ATGGTGTCTAATAATCCCAATCCTTCTGAGGGATTCTATTTGGATCCATCGGGAATGGCGTTGCCGGGGCTTGGACCTTTTGCCACCACTATGGCGGCGTCGACGGCGGCGTCGGAGGATATGTCTAAGAAGATTCGTAAGCCCTACACAATTACCAAGTCTAGAGAGAGCTGGACTGAGCCTGAGCACGACAAGTTCCTTGAAGCGCTTCAGCTTTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCAAAAACTGTTATACAGATACGTAGTCATGCACAGAAGTACTTCTTAAAAGTTCAAAAAACTGGAGGTGGTGAGCATTTGCCTCCTCCACGACCAAAAAGGAAGGCTGCTCATCCATATCCTCAGAAGGCTTCAAAAAATGTTGCCATGCCTTCTCAAGTGCCAGGGTCATTTCAGTCAACGTCTCCTCTAGTCGAACCTGGGTACATTATAAAGCCAGATTCATCTTCAATACTTACATGTCCGGCACCAGCTGCAGCTGTACCTTCTTGGACAGTGAACTCTGTCCAGCCACTCAATTCATCACAAGTGCCAACAACAGCAAATAATTGTTGCAGTAGTACTGAAAGCCCATCAAAAGCATGCCCTCTTGTTGAAACGATTGATCAAGGAAGTAACAATCATTCTCTTAGAGGTGATCCTCTCATTTATTTGCATTTCTGCCAGATTTCTCTCAGGTTTACAGTTTCATCGGCAGTGTCTTTGACCCAAATGCTTCAGGTTCTGCTGTTGATGAGAAACTTATCCATCAATTTGATCAGTCCTGATTTTGAGGATCATAGGAAGTTGCTCTCATCCTACGAGATTGATTCAGGGCCAATCCGGCATGGCGATATCGATAAGCCCATCTATGTCGATGATCATAAACCCAATTTGGTATCCAACTAG MVSNNPNPSEGFYLDPSGMALPGLGPFATTMAASTAASEDMSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKTGGGEHLPPPRPKRKAAHPYPQKASKNVAMPSQVPGSFQSTSPLVEPGYIIKPDSSSILTCPAPAAAVPSWTVNSVQPLNSSQVPTTANNCCSSTESPSKACPLVETIDQGSNNHSLRGDPLIYLHFCQISLRFTVSSAVSLTQMLQVLLLMRNLSINLISPDFEDHRKLLSSYEIDSGPIRHGDIDKPIYVDDHKPNLVSN Homology
BLAST of Spg038855 vs. NCBI nr
Match: XP_038876306.1 (protein REVEILLE 6-like [Benincasa hispida]) HSP 1 Score: 506.1 bits (1302), Expect = 2.1e-139 Identity = 266/315 (84.44%), Postives = 276/315 (87.62%), Query Frame = 0
BLAST of Spg038855 vs. NCBI nr
Match: XP_004145900.1 (protein REVEILLE 6 [Cucumis sativus] >KGN49920.1 hypothetical protein Csa_000189 [Cucumis sativus]) HSP 1 Score: 502.3 bits (1292), Expect = 3.0e-138 Identity = 262/315 (83.17%), Postives = 277/315 (87.94%), Query Frame = 0
BLAST of Spg038855 vs. NCBI nr
Match: XP_008437533.1 (PREDICTED: protein REVEILLE 6-like [Cucumis melo]) HSP 1 Score: 501.5 bits (1290), Expect = 5.1e-138 Identity = 263/315 (83.49%), Postives = 275/315 (87.30%), Query Frame = 0
BLAST of Spg038855 vs. NCBI nr
Match: XP_022973052.1 (protein REVEILLE 6-like [Cucurbita maxima]) HSP 1 Score: 500.7 bits (1288), Expect = 8.7e-138 Identity = 261/315 (82.86%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Spg038855 vs. NCBI nr
Match: KAG6579368.1 (Protein REVEILLE 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 500.0 bits (1286), Expect = 1.5e-137 Identity = 261/315 (82.86%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy Swiss-Prot
Match: Q8H0W3 (Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 3.3e-79 Identity = 181/332 (54.52%), Postives = 222/332 (66.87%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy Swiss-Prot
Match: C0SVG5 (Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 2.1e-57 Identity = 148/305 (48.52%), Postives = 186/305 (60.98%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy Swiss-Prot
Match: Q8RWU3 (Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.9e-51 Identity = 134/259 (51.74%), Postives = 155/259 (59.85%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy Swiss-Prot
Match: Q6R0H0 (Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.1e-49 Identity = 136/292 (46.58%), Postives = 169/292 (57.88%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy Swiss-Prot
Match: Q6R0G4 (Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.6e-46 Identity = 133/295 (45.08%), Postives = 164/295 (55.59%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy TrEMBL
Match: A0A0A0KJM4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140460 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.4e-138 Identity = 262/315 (83.17%), Postives = 277/315 (87.94%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy TrEMBL
Match: A0A1S3AUU1 (protein REVEILLE 6-like OS=Cucumis melo OX=3656 GN=LOC103482918 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.5e-138 Identity = 263/315 (83.49%), Postives = 275/315 (87.30%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy TrEMBL
Match: A0A6J1I6H1 (protein REVEILLE 6-like OS=Cucurbita maxima OX=3661 GN=LOC111471556 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 4.2e-138 Identity = 261/315 (82.86%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy TrEMBL
Match: A0A6J1E6I7 (protein REVEILLE 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430419 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 9.4e-138 Identity = 260/315 (82.54%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Spg038855 vs. ExPASy TrEMBL
Match: A0A6J1E3C1 (protein REVEILLE 6-like OS=Momordica charantia OX=3673 GN=LOC111026098 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.1e-137 Identity = 260/318 (81.76%), Postives = 275/318 (86.48%), Query Frame = 0
BLAST of Spg038855 vs. TAIR 10
Match: AT5G52660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 297.7 bits (761), Expect = 1.0e-80 Identity = 182/331 (54.98%), Postives = 223/331 (67.37%), Query Frame = 0
BLAST of Spg038855 vs. TAIR 10
Match: AT5G52660.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 296.6 bits (758), Expect = 2.3e-80 Identity = 181/332 (54.52%), Postives = 222/332 (66.87%), Query Frame = 0
BLAST of Spg038855 vs. TAIR 10
Match: AT4G01280.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 224.2 bits (570), Expect = 1.5e-58 Identity = 145/299 (48.49%), Postives = 183/299 (61.20%), Query Frame = 0
BLAST of Spg038855 vs. TAIR 10
Match: AT4G01280.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 224.2 bits (570), Expect = 1.5e-58 Identity = 148/305 (48.52%), Postives = 186/305 (60.98%), Query Frame = 0
BLAST of Spg038855 vs. TAIR 10
Match: AT3G09600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-52 Identity = 134/259 (51.74%), Postives = 155/259 (59.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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