Spg038825 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038825
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionplastid movement impaired 2
Locationscaffold12: 2923325 .. 2924383 (-)
RNA-Seq ExpressionSpg038825
SyntenySpg038825
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCAGGTATATTATTCTATTCAATATGAAAGTGATATAAACGGTTTGTGAGATATATGACAAACCCACGAACAATGTAACAAGATAATTAAATTGAATAACAAATTGATACATTGTCAAATGAGAGAGAAAGAGAGAGAGAGTTTGAACTATTCCATTTCCCCCACCTCACTTTATATAATATATCCACATGTAAATCCCCAAACAAAGCAAGTCTAAGAGAGAGAGATCACAAGATGGGAAATACCATGGGAGGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGCGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCACAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCGACCACCGCCCGCTGCAGCGCGCCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCACCGTTCGATCGAATTTTGTGGGGGTGTCGGATGACGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGCAGAGTTTGAGAGGCTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCGGAGAGGATTGTAGATTTTTGCATGAGAGACAACGGTGGCCACGACGACCAAGATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTGGTAATAAAGCGCGTGAGGTACGTTTTAGTTTTTTTTTTAGTTTTTTATTATTATTATTATTATTTTTTATTTTTTATTTTGTCTTCTATAATTTAGGGTCCGTTTGGAATACATTCTAATTTAAATGTTTTTCAAGAATGCATTTTTTCAAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGGTTACATTTCCTATAAGTGTTTTTATACACAAGTTATTGTATACTTAA

mRNA sequence

ATGGGAAATACCATGGGAGGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGCGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCACAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCGACCACCGCCCGCTGCAGCGCGCCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCACCGTTCGATCGAATTTTGTGGGGGTGTCGGATGACGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGCAGAGTTTGAGAGGCTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCGGAGAGGATTGTAGATTTTTGCATGAGAGACAACGGTGGCCACGACGACCAAGATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTGGTAATAAAGCGCGTGAGTTATTGTATACTTAA

Coding sequence (CDS)

ATGGGAAATACCATGGGAGGAGGATCAAGAAGAAGAAAGAGAACAACAAAAGTGATGAAAATCAATGGCGAAACCATCAAAATAACAACTCCAACCACAGCCTCCCAAGTCACAAGCCACTATCCAAATCACTCCCTCTACGAATCCCAATCCATCAAGCAATTTGGCCTCCGAGCCAAGCCTTTGGACCCTCACCACCAACTCAAACCTAAAACCCTCTACTTCCTCCTCCAATTGCCCTCCCTCCCCGGCGACCACCGCCCGCTGCAGCGCGCCCGCTCCGACATCCGTTTGTCCGCCTCCGACCGCCTCGAGTGTCTCATGCTCTCTCGTCGATCGGTTTCTGACCTTCAAACCACCGTTCGATCGAATTTTGTGGGGGTGTCGGATGACGGTGGCGCCGTCGTGCCGATGCAGGTCAAGTTTCGATTGCCGAGGGCAGAGTTTGAGAGGCTGACGAAGGAATGTAAGAGCAAGGTGGAGGCGGCGGAGAGGATTGTAGATTTTTGCATGAGAGACAACGGTGGCCACGACGACCAAGATGATAGGTTGTGGAAGATGGGTGGCGCGTGTAGTGGTAATAAAGCGCGTGAGTTATTGTATACTTAA

Protein sequence

MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTTVRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQDDRLWKMGGACSGNKARELLYT
Homology
BLAST of Spg038825 vs. NCBI nr
Match: XP_038887072.1 (uncharacterized protein At1g66480-like [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 149/205 (72.68%), Postives = 165/205 (80.49%), Query Frame = 0

Query: 1   MGNTMG--GGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLR 60
           MGN+MG  G  RRRKRTTKVMKINGE  KIT PTTA +VT H+PNH LYESQS++QFGLR
Sbjct: 1   MGNSMGIRGSIRRRKRTTKVMKINGEAFKITLPTTAYEVTIHHPNHLLYESQSLEQFGLR 60

Query: 61  AKPLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQ 120
           AKPLDPHHQLKPKTLYFLLQLP+L GDH PL+R  SD+ LSASDRLECL+LSRRSVSDLQ
Sbjct: 61  AKPLDPHHQLKPKTLYFLLQLPTLLGDHCPLRRVCSDLHLSASDRLECLLLSRRSVSDLQ 120

Query: 121 TTVRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFC--MRDNGG 180
            TVR +   +S DGGA  P+QVKFRLPR EFERL KECK+KVEA ERIVDFC   RDNG 
Sbjct: 121 -TVRFDPQRLSTDGGAAKPVQVKFRLPRVEFERLMKECKNKVEATERIVDFCGRSRDNGD 180

Query: 181 HDDQDDRLWKMGGACSGNKARELLY 202
               D+   KMG ACSG KARE+ +
Sbjct: 181 GGQDDELFGKMGDACSG-KAREVCF 203

BLAST of Spg038825 vs. NCBI nr
Match: KAE8650631.1 (hypothetical protein Csa_011666, partial [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-62
Identity = 135/195 (69.23%), Postives = 156/195 (80.00%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN +G GSRR+KRTTKVMKINGETIKIT PTTA +VTSHYP+H LYES+S+K FGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDI-RLSASDRLECLMLSRRSVSDLQT 120
           PLDPH  L+PKTLYFLLQLP+LP DH  L+R  SD+  LSASDRLECL+LSRRS+SDLQ 
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ- 120

Query: 121 TVRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFC--MRDNGGH 180
           T+R +    S D GA  P+QVKF+LPRAEFERL KECK+KVE  +RIVD+C   RDN   
Sbjct: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180

Query: 181 DDQDDRLWKMGGACS 193
           +  D+  WKMGGA S
Sbjct: 181 NQDDELFWKMGGAYS 194

BLAST of Spg038825 vs. NCBI nr
Match: KAG7036702.1 (hypothetical protein SDJN02_00322, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-62
Identity = 136/201 (67.66%), Postives = 146/201 (72.64%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN MGGGSRR KRT KVMKINGET KI TPTTA QVT+H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PLDPHHQLKPKTLYFLL LP LPG HRPL R RSD+  SASDRLECLMLSRRSVSDLQ +
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ-S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQ 180
            R +  G+S       P+Q+K R+PR EFERL KE KSKVEAAERIVD            
Sbjct: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180

Query: 181 DDRLWKMGGACSGNKARELLY 202
              LWK GG CSG      LY
Sbjct: 181 ---LWKTGGMCSGQAREYFLY 185

BLAST of Spg038825 vs. NCBI nr
Match: KAG6607003.1 (hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 137/199 (68.84%), Postives = 149/199 (74.87%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN MGGGSRR KRT KVMKINGET KI TPTTA QVT+H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PLDPHHQLKPKTLYFLL LP LPG HRPL R RSD+  SASDRLECLMLSRRSVSDLQ +
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ-S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQ 180
            R +  G+S       P+Q+K R+PR EFERL KE KSKVEAAERIVD            
Sbjct: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180

Query: 181 DDRLWKMGGACSGNKAREL 200
              LWK GG CSG +ARE+
Sbjct: 181 ---LWKTGGMCSG-QAREV 182

BLAST of Spg038825 vs. NCBI nr
Match: XP_022948507.1 (uncharacterized protein At1g66480-like [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61
Identity = 137/198 (69.19%), Postives = 148/198 (74.75%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN MGGGSRR KRT KVMKINGET KI TPTTA QVT+H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PLDPHHQLKPKTLYFLL LP LPG HRPL R RSD+  SASDRLECLMLSRRSVSDLQ +
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ-S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQ 180
            R +  G+S       P+Q+K R+PR EFERL KE KSKVEAAERIVD            
Sbjct: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180

Query: 181 DDRLWKMGGACSGNKARE 199
              LWK GG CSG +ARE
Sbjct: 181 ---LWKTGGMCSG-QARE 181

BLAST of Spg038825 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 0

Query: 5   MGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAKPLDP 64
           MG     +++  KVMKI+GET +I TP TA +VT+ YP + L +SQ++K FG+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLQLPSLPGD--------HRPLQRARSDIRLSASDRLECLMLSRRSVSD 124
           +  LKPK  YFL++LP LP +          P +R  S I + A +RL+ LMLSRR+VSD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQTTVRSNFVGVSDDGGAVVP------MQVKFRLPRAEFERLTKECKSKVEA-AERIVDF 176
           +        +G SD G    P        V+ RLPR++  +L +E  +   A AE+I+  
Sbjct: 121 VT-------IGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGI 179

BLAST of Spg038825 vs. ExPASy TrEMBL
Match: A0A0A0L7W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.0e-63
Identity = 136/196 (69.39%), Postives = 157/196 (80.10%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN +G GSRR+KRTTKVMKINGETIKIT PTTA +VTSHYP+H LYES+S+K FGLRAK
Sbjct: 1   MGNAIGRGSRRKKRTTKVMKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDI-RLSASDRLECLMLSRRSVSDLQT 120
           PLDPH  L+PKTLYFLLQLP+LP DH  L+R  SD+  LSASDRLECL+LSRRS+SDLQ 
Sbjct: 61  PLDPHCHLEPKTLYFLLQLPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQ- 120

Query: 121 TVRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFC--MRDNGGH 180
           T+R +    S D GA  P+QVKF+LPRAEFERL KECK+KVE  +RIVD+C   RDN   
Sbjct: 121 TLRFDPQRSSTDDGAAKPVQVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYG 180

Query: 181 DDQDDRLWKMGGACSG 194
           +  D+  WKMGGA SG
Sbjct: 181 NQDDELFWKMGGAYSG 195

BLAST of Spg038825 vs. ExPASy TrEMBL
Match: A0A6J1G9F9 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111452165 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 9.4e-62
Identity = 137/198 (69.19%), Postives = 148/198 (74.75%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN MGGGSRR KRT KVMKINGET KI TPTTA QVT+H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGGGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PLDPHHQLKPKTLYFLL LP LPG HRPL R RSD+  SASDRLECLMLSRRSVSDLQ +
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSVSDLQ-S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQ 180
            R +  G+S       P+Q+K R+PR EFERL KE KSKVEAAERIVD            
Sbjct: 121 FRLDPDGMSTACRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180

Query: 181 DDRLWKMGGACSGNKARE 199
              LWK GG CSG +ARE
Sbjct: 181 ---LWKTGGMCSG-QARE 181

BLAST of Spg038825 vs. ExPASy TrEMBL
Match: A0A6J1K9N3 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111492930 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 6.1e-61
Identity = 135/198 (68.18%), Postives = 147/198 (74.24%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN MG GSRR KRT KVMKINGET KI TPTTA QVT+H+PNH LY+SQSI Q GLRAK
Sbjct: 1   MGNAMGRGSRRSKRTAKVMKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PLDPHHQLKPKTLYFLL LP LPG HRPL R RSD+  SASDRLECLMLSRRS+SDLQ +
Sbjct: 61  PLDPHHQLKPKTLYFLLHLPPLPGSHRPLSRVRSDLCSSASDRLECLMLSRRSLSDLQ-S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGGHDDQ 180
            R +  G+S       P+Q+K R+PR EFERL KE KSKVEAAERIVD            
Sbjct: 121 FRLDPDGMSTASRPTGPVQIKLRVPREEFERLMKESKSKVEAAERIVD------------ 180

Query: 181 DDRLWKMGGACSGNKARE 199
              LWK GG CSG +ARE
Sbjct: 181 ---LWKTGGMCSG-QARE 181

BLAST of Spg038825 vs. ExPASy TrEMBL
Match: A0A5A7V2M4 (Putative Encodes a protein whose expression is responsive to nematode infection OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00470 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49
Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0

Query: 19  MKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQ 78
           MKINGET KIT PTTA +VTSHYPNH LYES+S+ QFGLRAKPLDPH QL+PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTTVRSNFVGVSDDGGAVVPM 138
           LP+L G  R L+R  SD+ LSASDRLECL+LSRRSVSDLQ T+R +    S   GA   +
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQ-TLRFDPQRSSIHDGAAKSV 120

Query: 139 QVKFRLPRAEFERLTKECKSKVEAAERIVDFC--MRDN 175
           QVKF+LPRAEFERL KECK+ VE  ++IVDFC   RDN
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCAKSRDN 157

BLAST of Spg038825 vs. ExPASy TrEMBL
Match: A0A1S3C4W5 (uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 5.4e-49
Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 0

Query: 19  MKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAKPLDPHHQLKPKTLYFLLQ 78
           MKINGET KIT PTTA +VTSHYPNH LYES+S+ QFGLRAKPLDPH QL+PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 79  LPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTTVRSNFVGVSDDGGAVVPM 138
           LP+L G  R L+R  SD+ LSASDRLECL+LSRRSVSDLQT        +  D GA   +
Sbjct: 61  LPTLYGVDRSLRRTCSDLHLSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHD-GAAKSV 120

Query: 139 QVKFRLPRAEFERLTKECKSKVEAAERIVDFCMR 173
           QVKF+LPRAEFERL KECK+ VE  ++IVDFC R
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCAR 153

BLAST of Spg038825 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN++GG     K+TTKVMKI+GET K+ TP TA +V   +P H L +S+S+K +G RAK
Sbjct: 1   MGNSLGG-----KKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PL+   +L+ K LYF+++    P    P +R RS I +SA +RLE LML+RRS SDL   
Sbjct: 61  PLEAKQRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSIL 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCM 172
                    ++ GAV   +VK R+P+AE E+L KE  ++ EA ++I    M
Sbjct: 121 KPPGGWTTEEEEGAV--RRVKVRIPKAELEKLVKEGATEAEATQKIAALFM 160

BLAST of Spg038825 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 0

Query: 5   MGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAKPLDP 64
           MG     +++  KVMKI+GET +I TP TA +VT+ YP + L +SQ++K FG+R+KPL+P
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 65  HHQLKPKTLYFLLQLPSLPGD--------HRPLQRARSDIRLSASDRLECLMLSRRSVSD 124
           +  LKPK  YFL++LP LP +          P +R  S I + A +RL+ LMLSRR+VSD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 125 LQTTVRSNFVGVSDDGGAVVP------MQVKFRLPRAEFERLTKECKSKVEA-AERIVDF 176
           +        +G SD G    P        V+ RLPR++  +L +E  +   A AE+I+  
Sbjct: 121 VT-------IGRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGI 179

BLAST of Spg038825 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 77/199 (38.69%), Postives = 115/199 (57.79%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGN++G      K+T  +M INGE+ K+ TP  A  V   +P H L ES+++K+ G+RAK
Sbjct: 1   MGNSLG-----TKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHRPLQRARSDIRLSASDRLECLMLSRRSVSDLQTT 120
           PL+PH  L+ K +YF+++LP    +  P +R RS I++SA +RLE L LSRRS SDL  +
Sbjct: 61  PLEPHQNLESKRIYFMVELPRTWKERTP-RRVRSGIQMSAKERLENLKLSRRSSSDL--S 120

Query: 121 VRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFC-MRDNGGHDD 180
           V      V+D+   V    VK +LP+ + E+L KE +S  + + +I   C +    G   
Sbjct: 121 VMKKKTEVNDEEREV--SSVKLKLPKWKIEKLRKESESGSDFSNKITQLCLLHIPSGLIH 180

Query: 181 QDDRLWKMGGACSGNKARE 199
           Q   L + GG   G + +E
Sbjct: 181 QRQHLLRNGGRNFGIEEKE 189

BLAST of Spg038825 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 5.7e-27
Identity = 85/207 (41.06%), Postives = 119/207 (57.49%), Query Frame = 0

Query: 1   MGNTMGGGSRRRKRTTKVMKINGETIKITTPTTASQVTSHYPNHSLYESQSIKQFGLRAK 60
           MGNT+      R+   KVMKI+G+  ++ TP TAS  T  YP   L +S+++K+ G+RAK
Sbjct: 1   MGNTI----MVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAK 60

Query: 61  PLDPHHQLKPKTLYFLLQLPSLPGDHR---PLQRARS-DIRLSASDRLECLMLSRRSVSD 120
           PL+P+  LKP   YFL+ LP  P D R   P +R  S +I + A +RLE LMLSRR+VSD
Sbjct: 61  PLEPNQILKPNHTYFLVDLP--PVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSD 120

Query: 121 LQTTVRSNFVGVSDDGGAVVPMQVKFRLPRAEFERLTKECKSKVEAAERIVDFCMRDNGG 180
           +    RS+ VG   DG  +   +V+ RLPR++  +L +E     E A +I+   M  +GG
Sbjct: 121 V-GAARSDVVG---DGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGG 180

Query: 181 HD---DQDDRLWKMGGACSGN--KARE 199
                D D    ++G A   N  KARE
Sbjct: 181 IQGGRDNDGLRQRLGIAEINNHYKARE 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887072.11.1e-6972.68uncharacterized protein At1g66480-like [Benincasa hispida][more]
KAE8650631.13.9e-6269.23hypothetical protein Csa_011666, partial [Cucumis sativus][more]
KAG7036702.13.9e-6267.66hypothetical protein SDJN02_00322, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6607003.11.1e-6168.84hypothetical protein SDJN03_00345, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948507.11.9e-6169.19uncharacterized protein At1g66480-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q6NLC84.3e-2740.32Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P... [more]
Match NameE-valueIdentityDescription
A0A0A0L7W05.0e-6369.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1[more]
A0A6J1G9F99.4e-6269.19uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1K9N36.1e-6168.18uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC1114929... [more]
A0A5A7V2M41.8e-4970.25Putative Encodes a protein whose expression is responsive to nematode infection ... [more]
A0A1S3C4W55.4e-4970.13uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G01340.13.2e-3044.44Encodes a protein whose expression is responsive to nematode infection. [more]
AT1G66480.13.0e-2840.32plastid movement impaired 2 [more]
AT1G71015.11.1e-2738.69unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G37840.15.7e-2741.06BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..113
e-value: 2.0E-18
score: 67.5
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..183
NoneNo IPR availablePANTHERPTHR33148:SF6PLASTID MOVEMENT IMPAIRED PROTEINcoord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038825.1Spg038825.1mRNA