Spg038786 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038786
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold12: 6243801 .. 6249604 (+)
RNA-Seq ExpressionSpg038786
SyntenySpg038786
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTCTCTCATGGAATGTAAGAGGGTTGGGTGTGAGGTCAAAGAGAGCCCTAATCAAAGACCTCATTGTTAGTTCTAACCCTAATATTGTCATTTTGCAGGAGACCAAGCTTAGTCAGATTGATAGGAGGCTGGTGAAATCCATATGGAGCTCTCGCCATATTGCTTGGCAATCTTTAGATGCGAGTAACTCAGCAGGGGGCATTTTGTTTATGTGGAAAGAGAATGTTTTGGATGTTTGTAACCCGATTTTAGGGGTTTTTCCCATTACTTTGCAATGTACTTTTCTGGGACAGAATGAAGGCTGGATAACAGGGGTTTATTGGCCGTGCGGTTATCATGATAGAAAGCGCTTTCTTCAGGAATTATACGACTTACATGGGCTTTGTCAGGGCTTGTGGTGTATTGCTGCAGACTTCAACTTGGTTAGGTGGTCTGTCGAGAGATTGAATAGCAGCAGATCCTCTAGAAGCATGAAATGGTTCAATAACTTTATTGGTGATGTAGAGATGATTGACTCGCCGATGCTCAATGGTAAATTCACTTGGTCTAGAATGAGGGAGAGGATAGCTGCGTCCAGAATTGATAGATTCCTAGTTTCGAACCAGTGGTATGATGTGTTTAAAAACCTGCGAGTGGAAAGGCTGCATAGGCCAACGTCGGACCACTTCCCTATCGTAATGTCGATTGGTACTTTCAAATGGGGGCCTACTCCCTTCAGATTTGAGAACACTTGGTTGGACCACCCTGAGTTCAAGAATAAAATAGACCTCTGGTGGAATAGTGTTCATCCGAGTGGTTGGGCTGGATATAGAGTCATGGAGAAGCTTAAGTGTCTTAAGGGATATCTGAGAGAGTGGAACAAAGATACTCGCTTAAGAGATGAATGCAAGAAAAGGGAGATTCTTAGTCAGATTGATCACATTGACCACCTAGAAGAGTAGAGGATTATTCAAAATTCTGAGGTGGAAGATAGAAAACGCCTCAAGGTGGAGCTGATGCAATTGACTGTGAATGATTAGAGAAGTCTTAATTAGAAAAGTAAGATTAAATGGCTTAAGGAAGGTGATGAGAACACCAATTTTTTTCATAGATGGACCACCGCCAGGAAAAATAGAGCCTTCATTTCAGTCCTTGAAGATGAAGTCGGGAATATCCTTTCTTCTGAAGCAGAGATTGAAAATGAAATTTTAGGCTTCTACAAGAGATTATATGAGAATATCCCCAGCCCGAAATTTGTGCTTGAAGGATGGAGTGGTCCCCCATTTCCTCGCCAGATAAAGATATGCTTGAAGATGCCTTCACCGAATCTGAAATCTTCAAGGCAGTGCAAGACATGGGCAATCTGAAATCTCCGGGTCCGGATGGGATGACAGGAGAGTTTTTTAAAAATTGTTGGAACATTTTGAAACAAGATATAGTAGAGATGTTCCAAGGGTATTCTGGTCTAAAAATGTTTGCCAAGGTTCTATCAGAAAGGCTTAAAAAGGTTCTGCCCAATACGATAAGTGACTGTCAAGCGGCTTTTGTCCACGGGAGGCAAATTCTTGACACTATCATTTTGGCTTCCGAAGCAGTAGAAGACTTGAGCATTAGAAAGGAAAAGGGGGTTTTGATCAAGCTTGATCTTGAGAAAGCCTACGACATGGTCAACTGGGAGTTCCTCGATGCTTTGCTTAAGTTGAAAGGCTTTGGCAATACATGGAGAATGTGGATCAAGGGGTGCCTCAATAACACTGACTTCTCGGTGATGTTAAATGGTAAGCCTAGAGGGAAGATTTTGGCTACTAGAGGCTTGAGACAAGGGGACCCGCTCTCCCCCTTTCTCTTTACTATAGTCGGTGATGCGATCAGCAAATCCGTGCAATTTTGTGTGGAGAAGAAGATCTTGAAAGGATGGATGGTGGGGAGAGAAAAGGTTTTGGTTTCTATTCTTCAATATGCGGATGATACTCTGATTTTTAGCCCCAATAATGACAAGGATATAGCAAATTGGTTGAGCATCCTCAAGACTATATTGACTGGAGCGGGCCTGGTGATGAACTCAGCCAAATCGGCTATCATTGGGATAAATATGGAGTTGAATGAGCTGAATGATAAGGCTATTTCCCTTGGTTGCAAGGTTGAGTCCTTCCCATTTACCTACCTTGGATTCTCCCTTGGAGGTAATTATCACAGAGTGGCCTTTTGGGATCCGATAATGGAAAGATTCAGTAGAAAGCTAGATACGTGGAAGAAATTCCCTATATCCAAAGGGGGAAGAGCCACCTTAATTCAATCGGTCCTTAATAGTCTTCCGATATACTACTTCTCTCCTTTAAAAGCCCCTAAATTGACTATCAAAGCATTAGAGAAAATGGCCAGAGACTTTGTTTGGAATGGGGGCAGCTACAAACAAGGATCCAACTTAGTAAGATGGGATTGGTCCTCTCTGCCTATAAGCCACGGGGGTTTGGGTGGGGTTTGGGTGTGGGCTCTTTAATGCACCAAAATATCTCCCTCATGACTAAGTGGCTGTGGAGGTTTACTCAGGAAAAAAACTCAATGTGGAGAAGAATTATTGCTAGTATCTATGGAGTCAATCCTCGAAGCTGGAATTCTGAGACCTTAAAAGAGAAGAAAGGCAACAGGATTTGGGTGGATATTGCTGCAAATTACCCCACAGTCCAGCGCTTCATCAAGTTCAATGCCTCTAATGGTAAAAATATCAGATTTCGGGAGGACGTTTGGTGTGATAATCAACCCCTAAACCAACGCTTCCCTGATTTACATCTTCTACCCAAGAAGAAGGATGCTGTCATAGCAGATTGCTGGAGTAGTAGTGTGCAATCTTGGGACTTGGACTTTAGAAGAGGTCTCTTTGATAGAGAAATCACCAGTTGGGTGGCTTTGGTGGAGAAGCTTCACAATGTTCACATTGGGCAGAACCCAGACTCGGTTAGTTGGTCTTTGGAGGGATTGGGCAAGTATTCGACCAAGTCCCTTTTCTACAAGCTGACAAAATCTTCCCCTAAAATCAGCTCTACCACTAGTAAGTTAATTTGGAAGCATAATAGCCCGAAGAAGGTCAAAGTTTTTTTGTGGTCCATAGCCTATCGTAGCCTAAATACGGATGAGAGACTCCAAACCAAGTTTAAGCAATGGACCCTTTCCCCCTCGGCCTGTAGATTTTGTGTTAAAGATGGGGAAAACATCGACCACTTATTCATCCACTGTGATTTTGCTTGGAGGGCGTGGAATTTCATTGCTAGACTATTGGGGATATCCTTCTGCCTCCCCAAAAAGATTGATGATTGGCTTAGTGAAGGCCTTACGGCTTGGAACCTAAAACAGAAAGCCAAGGTGATTGCTACTTGTGCTTTTAGGGCCACCCTTTGGAGTCTTTGGAAAGAAAGGAACGCTAGAACGTTTGAAGATAAGTCTTACAACTTCGATTCTTTTTGTGATTGTGTACAAAATACGACTTCGTGGTAGATTTCTTTACACAAGAATTTTTTTTGTAATTATAGCTTGCTCATGACTATTAACGATTGGCAAGCTCTTTTGAGATAGTTATCGAGCAGGGGCGACCTCCTCCCCTGGCCCTTAGGCTGTATTTGCCTTTTTGTTGTTAATAGATAGATATCTCTTATTGTTTCCTATCAAAAAAAAAAAAAAAAAATCAAAATCAAAATCAAAATTGGAAAGAGAATACCAAAGAAAGGCTTTGAGATGGGCTGATTTTTATATCCATCGATCCATGAACTATATTTATCTTCAAAGATCTGTTGATTTTTTTTTTTTTTTTACAAAAAGCGAAACTTTTCATTGAATAAATGAAAAGAGACTAATGCTCAAAAGATTTGTTGATTTCTTTCCAACCATAATTTTCGAAACTAAGGCTTTAACCACATTTACCCAAAGACAATGAGATCACAAAGACAATGGAGGACCCAATAAAATCGGAAGGACATTACTTCTGGCTTCAAAATAGAAAAACCCACCGCAAATTGAAGACTTTGAAAAGTTTAAACCAACTAGCCAACGAAAAGGATCACTCAAATAGTAGGTGGTTAAGAGATTCCCATCTTGAAAACAAAGACAGCCATAAGAAGACATAAGACATGCTAAAGACCACTTTCTTTGAAGAACACCTGCTGTATTGAGGTTACTGTTAAGCAAAATCCAAAAAAGAATATTAATACTTTTTGTTCTTTTGATTTTCATCAAGCAGAAAACAAATCTTTCGGGAGCGAAGAAGAAATAGCCAACTTTCTCGAAGAGATTTAACAAAGAAAGCACCAGAAGCCGCCAAAATCCATTTCCTTGAATCATCACCATTTCCCACTAGAGAAATTGATAAAACTTCCAACAAGAGGGTAAAACCGAATCAATTAACAATTAAAAACTAACAACGAAAACAAAACTACAAATTACTACTAAGTACTAATTCCACTACTTCCATCTAAGAAGCACAGACACTTTAGTTTGGCTAGCGTTTCTGTGTCCAATAGGTGTCGAACACTTGGACACTCCGACACTTGTTGGATACGTATCAGACACTTGTTGGATACGTATCGAACACTTGTTAAGATAATTGATATGTGGCAAAAACTAGTTGTACAAAGTTAATATAGATCCATATCGAACACTTGTTAAGTATACTAAATAGACACAATATCAAATGACAAAAATAATAAATTTTAAGAGTGAGATACAATAAACTCATTTTATTAAGCATACAAATGCATTAACTTATTGGTTTTGAATTTCCTTCTTGTATAAAAATGATATATATTTTAAAAAATGTATATTTTACTAAATGTGTCCATGTCGTGTCTATGTCCTATATTTTAAAAAAATGACGTGTTACCGTGTCCGCGTCGTGTCGTATCTATGTCTCGCGTCCGTATCCATGTTTCTTAGACTTCCGTAATTCCTCCAACTCATTAGATGGTTGTTAGCTATCCTCCTAATTATTTGTTTATTAGCAGCTCTTTGGTTAGTTGATGGTTAGCAATACAGTTGTTAGCGACGTTGACATTTTCATTCATCCTTGATTATAAGACAGTAATAATGATAACAGATTTTTCCATTCAACTTTACACCAAAAGTATCATGCTATTCCCCCTAACCAAGATCGGGATAGTTTGCTTATGCATGAGAGCAGTTAAAATTTTACTGGCACCAATGTAGGGTTTGATTTTAAAATTGTAGGGGGTTCAGGGCTATTACAACCTAAAATTGGATCTTGGCTCACAGCACCAGAAGAAAAAGAAGAAATTCCATTAACCTGTGGAAAAGCAAGCCTTGACATGTTAATTTTCCGCGTGAAAAACAGTTTTTGAAGTTGATTATTTCTTCTCTTACAAACACAGATGATTGCCAATATTTTATCAAGAAAATAATGCATTTCACCCACTAATCTTCTACATAATATAGTTAATATTTGATGTTATTAACTGAATTTTTTTTCCCTTCTCTCTGACAGGTGGAACAAGGAAGCCCGCAGGCTCTGCTAGCAAACGAGTCCTCCAAATTTGCAAGCTTTGTTAAGGCGTCTAAGATGTGACCATTCGACAAGTTATGCTTTGTCTATGCCTGGATCATGCTTTCGTGATCATTAAAGGAGTGCTCCTTCCTACTGTTCGTCTTAACCATGCATTTTAATCACTAACATGCTGGCAATTACTAAATACAAAGACCATTTGCAAGATCTCTAGTCATCTGAGAACTCATTTGTATGACGCTTGAGCTTTTATGTTTTTTTTTTTTTTCTTATTTTGTTGTCCGCTTCTGCATATTATGAATCAAATATGAT

mRNA sequence

ATGAAGATTCTCTCATGGAATGAGACCAAGCTTAGTCAGATTGATAGGAGGCTGGTGAAATCCATATGGAGCTCTCGCCATATTGCTTGGCAATCTTTAGATGCGAGCCTTACGGCTTGGAACCTAAAACAGAAAGCCAAGGTGATTGCTACTTGTGCTTTTAGGGCCACCCTTTGGAGTCTTTGGAAAGAAAGGAACGCTAGAACGTTTGAAGATAAGTCTTACAACTTCGATTCTTTTTGTGATTGTGTACAAAATACGACTTCGTGGTGTCGAACACTTGGACACTCCGACACTTGTTGGATACGTATCAGACACTTGTTGGATACGTATCGAACACTTGTTAAGATAATTGATATGTGGCAAAAACTAGTTGTGGAACAAGGAAGCCCGCAGGCTCTGCTAGCAAACGAGTCCTCCAAATTTGCAAGCTTTGTTAAGGCGTCTAAGATGTGA

Coding sequence (CDS)

ATGAAGATTCTCTCATGGAATGAGACCAAGCTTAGTCAGATTGATAGGAGGCTGGTGAAATCCATATGGAGCTCTCGCCATATTGCTTGGCAATCTTTAGATGCGAGCCTTACGGCTTGGAACCTAAAACAGAAAGCCAAGGTGATTGCTACTTGTGCTTTTAGGGCCACCCTTTGGAGTCTTTGGAAAGAAAGGAACGCTAGAACGTTTGAAGATAAGTCTTACAACTTCGATTCTTTTTGTGATTGTGTACAAAATACGACTTCGTGGTGTCGAACACTTGGACACTCCGACACTTGTTGGATACGTATCAGACACTTGTTGGATACGTATCGAACACTTGTTAAGATAATTGATATGTGGCAAAAACTAGTTGTGGAACAAGGAAGCCCGCAGGCTCTGCTAGCAAACGAGTCCTCCAAATTTGCAAGCTTTGTTAAGGCGTCTAAGATGTGA

Protein sequence

MKILSWNETKLSQIDRRLVKSIWSSRHIAWQSLDASLTAWNLKQKAKVIATCAFRATLWSLWKERNARTFEDKSYNFDSFCDCVQNTTSWCRTLGHSDTCWIRIRHLLDTYRTLVKIIDMWQKLVVEQGSPQALLANESSKFASFVKASKM
Homology
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BLAST of Spg038786 vs. NCBI nr
Match: XP_038903703.1 (ethanolamine-phosphate cytidylyltransferase isoform X2 [Benincasa hispida])

HSP 1 Score: 84.3 bits (207), Expect = 9.6e-13
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 37  LTAWNLKQKAKVIATCAFRATLWSLWKERNARTFEDKSYNFDSFCDCVQNTTSW 91
           L  WNLK +AKV+ +C F+A LW LWKERNARTFEDKS +F SFC  VQN +SW
Sbjct: 290 LNGWNLKGEAKVVGSCTFKALLWHLWKERNARTFEDKSLSFGSFCSLVQNISSW 343

The following BLAST results are available for this feature:
BLAST of Spg038786 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903703.19.6e-1366.67ethanolamine-phosphate cytidylyltransferase isoform X2 [Benincasa hispida][more]
BLAST of Spg038786 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg038786 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg038786 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038786.1Spg038786.1mRNA